diff --git a/CellModeller/Simulator.py b/CellModeller/Simulator.py index 828fe7e0..808fb069 100644 --- a/CellModeller/Simulator.py +++ b/CellModeller/Simulator.py @@ -34,7 +34,7 @@ class Simulator: def __init__(self, \ moduleName, \ dt, \ - outputSteps=50, \ + pickleSteps=50, \ outputDirName=None, \ moduleStr=None, \ saveOutput=False, \ @@ -45,6 +45,7 @@ def __init__(self, \ self.phys = None self.sig = None self.integ = None + self.pickleSteps = pickleSteps # No cells yet, initialise indices and empty lists/dicts, zero counters self._next_id = 1 @@ -91,7 +92,6 @@ def __init__(self, \ # Set up the data output directory self.dataOutputInitialised=False self.outputDirName = outputDirName - self.outputSteps = outputSteps self.setSaveOutput(saveOutput) ''' self.saveOutput = saveOutput @@ -337,7 +337,7 @@ def step(self): if state.divideFlag: self.divide(state) - if self.saveOutput and self.stepNum%self.outputSteps==0: + if self.saveOutput and self.stepNum%self.pickleSteps==0: self.writePickle() self.stepNum += 1 diff --git a/Examples/Tutorial_1/Tutorial_1a.py b/Examples/Tutorial_1/Tutorial_1a.py index f38625c5..ecb2d2cd 100644 --- a/Examples/Tutorial_1/Tutorial_1a.py +++ b/Examples/Tutorial_1/Tutorial_1a.py @@ -22,7 +22,7 @@ def setup(sim): sim.addRenderer(therenderer) # Specify how often data is saved - sim.pickleSteps = 20 + sim.pickleSteps = 100 def init(cell): # Specify mean and distribution of initial cell size