From 10dac3e9c2aea8ca399a01ae547bc11a70fe337b Mon Sep 17 00:00:00 2001 From: ugur Date: Tue, 26 Mar 2024 13:41:41 +0000 Subject: [PATCH 1/4] Added markdown files to release assets --- .github/workflows/nightly_snapshot.yaml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/nightly_snapshot.yaml b/.github/workflows/nightly_snapshot.yaml index d45e0d2..bb4e72e 100644 --- a/.github/workflows/nightly_snapshot.yaml +++ b/.github/workflows/nightly_snapshot.yaml @@ -38,7 +38,8 @@ jobs: - name: Make Snapshot uses: ncipollo/release-action@v1 with: - artifacts: "general_schema.json,BICAN_schema.json,CAP_schema.json" + artifacts: "general_schema.json,BICAN_schema.json,CAP_schema.json,general_schema.md,build/BICAN_schema.md, + CAP_schema.md" body: "Nightly snapshot release. Draft only, please use a stable release instead." allowUpdates: true draft: true From 560b5a8bd838c83cfe4d80393aa35caca203ba0d Mon Sep 17 00:00:00 2001 From: ugur Date: Tue, 26 Mar 2024 13:46:32 +0000 Subject: [PATCH 2/4] Updated Siletti_expression_evidence.json --- examples/Siletti_expression_evidence.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/examples/Siletti_expression_evidence.json b/examples/Siletti_expression_evidence.json index 010f71e..95c75a9 100644 --- a/examples/Siletti_expression_evidence.json +++ b/examples/Siletti_expression_evidence.json @@ -25,7 +25,7 @@ { "labelset": "Subtype", "cell_label": "INT-SST-CHODL", "cell_fullname": "Long-range projecting, sleep-active interneuron", - "marker_gene_evidence": ["DLX1","SST","CHODL","TACR1","NPY","NOS1","CORT"], + "marker_gene_evidence": ["DLX1","SST","CHODL","TACR1","NPY","NOS1","CORT",], "rationale": "CORT is more specifically enriched in the neuronal cluster with the high NOS1 and NPY expression.\nWithout CORT, also labels some AVP+ neurons with low NOS1 and NPY expression.", "rationale_dois": ["https://doi.org/10.1038/nn.4216"] } ] From 83f8376c156200e20684516fdacffd39a9c42d41 Mon Sep 17 00:00:00 2001 From: ugur Date: Tue, 26 Mar 2024 13:46:59 +0000 Subject: [PATCH 3/4] Reverted Siletti_expression_evidence.json --- examples/Siletti_expression_evidence.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/examples/Siletti_expression_evidence.json b/examples/Siletti_expression_evidence.json index 95c75a9..010f71e 100644 --- a/examples/Siletti_expression_evidence.json +++ b/examples/Siletti_expression_evidence.json @@ -25,7 +25,7 @@ { "labelset": "Subtype", "cell_label": "INT-SST-CHODL", "cell_fullname": "Long-range projecting, sleep-active interneuron", - "marker_gene_evidence": ["DLX1","SST","CHODL","TACR1","NPY","NOS1","CORT",], + "marker_gene_evidence": ["DLX1","SST","CHODL","TACR1","NPY","NOS1","CORT"], "rationale": "CORT is more specifically enriched in the neuronal cluster with the high NOS1 and NPY expression.\nWithout CORT, also labels some AVP+ neurons with low NOS1 and NPY expression.", "rationale_dois": ["https://doi.org/10.1038/nn.4216"] } ] From 567cd5e1caaf9643a0d6f05d3ba5fc5bdf6a3701 Mon Sep 17 00:00:00 2001 From: ugur Date: Tue, 26 Mar 2024 14:01:09 +0000 Subject: [PATCH 4/4] Fixed path issue --- .github/workflows/nightly_snapshot.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/nightly_snapshot.yaml b/.github/workflows/nightly_snapshot.yaml index bb4e72e..d0d3d60 100644 --- a/.github/workflows/nightly_snapshot.yaml +++ b/.github/workflows/nightly_snapshot.yaml @@ -38,8 +38,8 @@ jobs: - name: Make Snapshot uses: ncipollo/release-action@v1 with: - artifacts: "general_schema.json,BICAN_schema.json,CAP_schema.json,general_schema.md,build/BICAN_schema.md, - CAP_schema.md" + artifacts: "general_schema.json,BICAN_schema.json,CAP_schema.json,build/general_schema.md, + build/BICAN_schema.md,build/CAP_schema.md" body: "Nightly snapshot release. Draft only, please use a stable release instead." allowUpdates: true draft: true