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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(plot,reactions)
S3method(print,reactions)
export("%c%")
export(as.graph)
export(as.reactions)
export(as.stability)
export(closest)
export(constant_flux)
export(constrain_by_Keq)
export(deriv_ma)
export(eigendynamics)
export(enorm)
export(fba)
export(find_hmdb)
export(fva)
export(grep_id)
export(hmdb_concentration)
export(hyp)
export(inside)
export(jacobian)
export(kcone)
export(kcone_null)
export(ma_terms)
export(make_irreversible)
export(mass_action)
export(minimal_perturbation)
export(minimal_perturbation_lp)
export(occupation)
export(patch)
export(pfba)
export(plot_basis)
export(plot_red)
export(polytope_basis)
export(priority_mean)
export(r_order)
export(read_reactions)
export(read_sbml)
export(rp)
export(sbml_params)
export(sbml_reactions)
export(sbml_species)
export(species)
export(stability_analysis)
export(stoichiometry)
export(timecourse)
export(which_reaction)
import(grDevices)
import(graphics)
import(rcdd)
import(stats)
import(utils)
importFrom(MASS,Null)
importFrom(Matrix,Matrix)
importFrom(Matrix,bdiag)
importFrom(RCurl,curlEscape)
importFrom(Rcpp,sourceCpp)
importFrom(deSolve,lsoda)
importFrom(grDevices,adjustcolor)
importFrom(graphics,image)
importFrom(graphics,plot)
importFrom(graphics,polygon)
importFrom(limma,contrasts.fit)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,makeContrasts)
importFrom(limma,topTable)
importFrom(magrittr,'%>%')
importFrom(pheatmap,pheatmap)
importFrom(quadprog,solve.QP)
importFrom(rcdd,d2q)
importFrom(rcdd,q2d)
importFrom(stats,kmeans)
importFrom(stats,model.matrix)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,rexp)
importFrom(stats,sd)
importFrom(stats,weighted.mean)
importFrom(utils,combn)
importFrom(utils,read.csv)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(xml2,read_html)
importFrom(xml2,read_xml)
importFrom(xml2,xml_attr)
importFrom(xml2,xml_attrs)
importFrom(xml2,xml_find_all)
importFrom(xml2,xml_find_first)
importFrom(xml2,xml_name)
importFrom(xml2,xml_ns)
importFrom(xml2,xml_text)
importMethodsFrom(Matrix,summary)
useDynLib(dycone)