From b885c9c59a59fdb312c96c8f909439f2db245864 Mon Sep 17 00:00:00 2001
From: Daniel Machado <cdanielmachado@gmail.com>
Date: Thu, 3 Jun 2021 15:04:43 +0200
Subject: [PATCH] fix bug with spontaneous reactions

---
 carveme/__init__.py                           |     2 +-
 carveme/data/benchmark/models/bsub.xml        | 22057 ++++++++++++----
 carveme/data/benchmark/models/ecol.xml        | 18507 +++++++++----
 carveme/data/benchmark/models/mgen.xml        |  8958 ++++---
 carveme/data/benchmark/models/paer.xml        | 21023 +++++++++++----
 carveme/data/benchmark/models/rsol.xml        | 14694 ++++++++--
 carveme/data/benchmark/models/sone.xml        |  8924 ++++---
 carveme/data/benchmark/results/biolog.tsv     |   240 +-
 .../data/benchmark/results/essentiality.tsv   |  9528 +++----
 carveme/data/generated/bigg_gprs.csv.gz       |   Bin 622703 -> 624752 bytes
 .../data/generated/gene_annotations.tsv.gz    |   Bin 235831 -> 235831 bytes
 .../data/generated/model_specific_data.csv.gz |   Bin 428661 -> 428661 bytes
 carveme/reconstruction/scoring.py             |     2 +-
 carveme/universe/download.py                  |     4 +-
 setup.py                                      |     2 +-
 15 files changed, 73457 insertions(+), 30484 deletions(-)
diff --git a/carveme/__init__.py b/carveme/__init__.py
index 71570b6..720e5c5 100755
--- a/carveme/__init__.py
+++ b/carveme/__init__.py
@@ -4,7 +4,7 @@
 from reframed import set_default_solver
 from reframed.solvers.solver import default_parameters, Parameter
 
-__version__ = '1.5.0'
+__version__ = '1.5.1'
 
 project_dir = os.path.abspath(os.path.dirname(__file__)) + '/'
 
diff --git a/carveme/data/benchmark/models/bsub.xml b/carveme/data/benchmark/models/bsub.xml
index 490b6a5..df54e4a 100644
--- a/carveme/data/benchmark/models/bsub.xml
+++ b/carveme/data/benchmark/models/bsub.xml
@@ -3,7 +3,7 @@
   <model metaid="bsub" id="bsub" fbc:strict="true">
     <notes>
       <html xmlns="http://www.w3.org/1999/xhtml">
-        <p>Description: This model was built with CarveMe version 1.4.1</p>
+        <p>Description: This model was built with CarveMe version 1.5.0</p>
       </html>
     </notes>
     <listOfCompartments>
@@ -142,6 +142,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_12dgr140_c" sboTerm="SBO:0000247" id="M_12dgr140_c" name="1,2-Diacyl-sn-glycerol (ditetradecanoyl, n-C14:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C31H60O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C31H60O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr140_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146479"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_12dgr140_p" sboTerm="SBO:0000247" id="M_12dgr140_p" name="1,2-Diacyl-sn-glycerol (ditetradecanoyl, n-C14:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C31H60O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C31H60O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr140_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146479"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_12dgr141_c" sboTerm="SBO:0000247" id="M_12dgr141_c" name="1,2-Diacyl-sn-glycerol (ditetradec-7-enoyl, n-C14:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C31H56O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -222,6 +262,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_12dgr161_c" sboTerm="SBO:0000247" id="M_12dgr161_c" name="1,2-Diacyl-sn-glycerol (dihexadec-9-enoyl, n-C16:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C35H64O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H64O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr161_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3774"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_12dgr161_p" sboTerm="SBO:0000247" id="M_12dgr161_p" name="1,2-Diacyl-sn-glycerol (dihexadec-9-enoyl, n-C16:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C35H64O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H64O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr161_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3774"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_12dgr180_c" sboTerm="SBO:0000247" id="M_12dgr180_c" name="1,2-Diacyl-sn-glycerol (dioctadecanoyl, n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C39H76O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -321,7 +401,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_12ppd__S_c" sboTerm="SBO:0000247" id="M_12ppd__S_c" name="(S)-Propane-1,2-diol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O2">
+      <species metaid="M_12ppd__R_c" sboTerm="SBO:0000247" id="M_12ppd__R_c" name="(R)-Propane-1,2-diol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C3H8O2</p>
@@ -331,19 +411,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_12ppd__S_c">
+            <rdf:Description rdf:about="#M_12ppd__R_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45065"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DNIAPMSPPWPWGF-VKHMYHEASA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROPANE-1-2-DIOL"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44863"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DNIAPMSPPWPWGF-GSVOUGTGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01861"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -550,6 +629,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_1hdec9eg3p_c" sboTerm="SBO:0000247" id="M_1hdec9eg3p_c" name="1-hexadec-9-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H35O7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H35O7P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_1hdec9eg3p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15326"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_1hdecg3p_c" sboTerm="SBO:0000247" id="M_1hdecg3p_c" name="1-hexadecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C19H37O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -571,6 +670,27 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_1odec11eg3p_c" sboTerm="SBO:0000247" id="M_1odec11eg3p_c" name="1-octadec-11-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C21H39O7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C21H39O7P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_1odec11eg3p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15328"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_1odecg3p_c" sboTerm="SBO:0000247" id="M_1odecg3p_c" name="1-octadecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C21H41O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -661,6 +781,27 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_1tdec7eg3p_c" sboTerm="SBO:0000247" id="M_1tdec7eg3p_c" name="1-tetradec-7-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C17H31O7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C17H31O7P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_1tdec7eg3p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15330"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_23ddhb_c" sboTerm="SBO:0000247" id="M_23ddhb_c" name="2,3-Dihydro-2,3-dihydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -755,6 +896,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_23dhbzs_c" sboTerm="SBO:0000247" id="M_23dhbzs_c" name="2,3-dihydroxybenzoylserine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H10NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H10NO6</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_23dhbzs_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-23-DIHYDROXYBENZOYL-L-SERINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1487"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VDTYHTVHFIIEIL-LURJTMIESA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15332"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_23dhdp_c" sboTerm="SBO:0000247" id="M_23dhdp_c" name="2,3-Dihydrodipicolinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C7H5NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -882,6 +1053,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_24dhhed_c" sboTerm="SBO:0000247" id="M_24dhhed_c" name="2,4-Dihydroxyhept-2-enedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H8O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_24dhhed_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/APNIDHDQYISZAE-HYXAFXHYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:73089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01170062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM722757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03708"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_25aics_c" sboTerm="SBO:0000247" id="M_25aics_c" name="(S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C13H15N4O12P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1177,6 +1375,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2agpe141_c" sboTerm="SBO:0000247" id="M_2agpe141_c" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C19H38NO7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H38NO7P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2agpe141_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3447"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2agpe141_p" sboTerm="SBO:0000247" id="M_2agpe141_p" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C19H38NO7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H38NO7P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2agpe141_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3447"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2agpe160_c" sboTerm="SBO:0000247" id="M_2agpe160_c" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C21H44NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1233,6 +1471,44 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2agpe161_c" sboTerm="SBO:0000247" id="M_2agpe161_c" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C21H42NO7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C21H42NO7P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2agpe161_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3448"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2agpe161_p" sboTerm="SBO:0000247" id="M_2agpe161_p" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C21H42NO7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C21H42NO7P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2agpe161_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3448"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2agpe180_c" sboTerm="SBO:0000247" id="M_2agpe180_c" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C23H48NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1955,6 +2231,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2dhglcn_e" sboTerm="SBO:0000247" id="M_2dhglcn_e" name="2-Dehydro-D-gluconate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2dhglcn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06473"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM582"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VBUYCZFBVCCYFD-JJYYJPOSSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03889"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2dhglcn_p" sboTerm="SBO:0000247" id="M_2dhglcn_p" name="2-Dehydro-D-gluconate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2dhglcn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06473"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM582"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VBUYCZFBVCCYFD-JJYYJPOSSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03889"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2dhguln_c" sboTerm="SBO:0000247" id="M_2dhguln_c" name="2-Dehydro-L-gulonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H9O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2028,6 +2372,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2dmmql8_c" sboTerm="SBO:0000247" id="M_2dmmql8_c" name="2-Demethylmenaquinol 8" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C50H72O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C50H72O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2dmmql8_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61873"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FGYPGICSXJEKCG-AENDIINCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15353"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2dr1p_c" sboTerm="SBO:0000247" id="M_2dr1p_c" name="2-Deoxy-D-ribose 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2158,6 +2526,76 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2hadnt_c" sboTerm="SBO:0000247" id="M_2hadnt_c" name="2 Hydroxylamino 4 6 dinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HNO</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2hadnt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_2hh24dd_c" sboTerm="SBO:0000247" id="M_2hh24dd_c" name="2-Hydroxyhepta-2-4-dienedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H6O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O5</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2hh24dd_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146251"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2hmcnsad_c" sboTerm="SBO:0000247" id="M_2hmcnsad_c" name="2-Hydroxymuconate semialdehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H6O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H6O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2hmcnsad_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17236"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:66943"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:67110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71207"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KGLCZTRXNNGESL-WFTYEQLWSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01030926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01030970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HYDROXYMUCONATE-SALD"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00518"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2hxmp_c" sboTerm="SBO:0000247" id="M_2hxmp_c" name="2  Hydroxymethyl phenol C7H8O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2314,6 +2752,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2m35mdntha_c" sboTerm="SBO:0000247" id="M_2m35mdntha_c" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2m35mdntha_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_2m35mdntha_e" sboTerm="SBO:0000247" id="M_2m35mdntha_e" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2m35mdntha_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_2maacoa_c" sboTerm="SBO:0000247" id="M_2maacoa_c" name="2-Methyl-3-acetoacetyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2710,6 +3182,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2ohed_c" sboTerm="SBO:0000247" id="M_2ohed_c" name="2-Oxohept-3-ene-1,7-dioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H6O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O5</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2ohed_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48062"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HYVSZVZMTYIHKF-IWQZZHSRSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM723698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01960"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2p4c2me_c" sboTerm="SBO:0000247" id="M_2p4c2me_c" name="2-phospho-4-(cytidine 5&apos;-diphospho)-2-C-methyl-D-erythritol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C14H22N3O17P3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2868,6 +3369,107 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_34dhbz_c" sboTerm="SBO:0000247" id="M_34dhbz_c" name="3,4-Dihydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhbz_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-4-DIHYDROXYBENZOATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM204"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YQUVCSBJEUQKSH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00197"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_34dhpacet_c" sboTerm="SBO:0000247" id="M_34dhpacet_c" name="3-4-Dihydroxyphenylacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhpacet_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01161"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CFFZDZCDUFSOFZ-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00854"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_34dhpha_c" sboTerm="SBO:0000247" id="M_34dhpha_c" name="3-4-Dihydroxyphenylacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhpha_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01161"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CFFZDZCDUFSOFZ-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00854"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_34hpp_c" sboTerm="SBO:0000247" id="M_34hpp_c" name="3-(4-Hydroxyphenyl)pyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2938,6 +3540,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_35dnta_c" sboTerm="SBO:0000247" id="M_35dnta_c" name="N N bis 3 5 dinitrotolyl  amine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_35dnta_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_35dnta_e" sboTerm="SBO:0000247" id="M_35dnta_e" name="N N bis 3 5 dinitrotolyl  amine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_35dnta_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_3amp_c" sboTerm="SBO:0000247" id="M_3amp_c" name="3  AMP C10H12N5O7P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3155,6 +3791,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3dhgulnp_c" sboTerm="SBO:0000247" id="M_3dhgulnp_c" name="3-keto-L-gulonate-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H8O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O10P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3dhgulnp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BDUIIKXSXFDPEC-LWKDLAHASA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C14899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-2343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10596"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3dhq_c" sboTerm="SBO:0000247" id="M_3dhq_c" name="3-Dehydroquinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H9O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3254,6 +3916,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3hasp__L_c" sboTerm="SBO:0000247" id="M_3hasp__L_c" name="Erythro 3 HydroxyL aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C4H6NO5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H6NO5</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_3hasp__L_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_3hbcoa__R_c" sboTerm="SBO:0000247" id="M_3hbcoa__R_c" name="(R)-3-Hydroxybutyryl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H38N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3697,6 +4376,43 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3mb2coa_c" sboTerm="SBO:0000247" id="M_3mb2coa_c" name="3-Methylbut-2-enoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C26H38N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O17P3S</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3mb2coa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-70744"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BXIPALATIYNHJN-ZMHDXICWSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-METHYL-CROTONYL-COA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM389"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01966"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3mb_e" sboTerm="SBO:0000247" id="M_3mb_e" name="3-Methylbutanoic acid" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H9O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3759,6 +4475,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3mgcoa_c" sboTerm="SBO:0000247" id="M_3mgcoa_c" name="3-Methylglutaconyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H37N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H37N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -5.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3mgcoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-70772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03231"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GXKSHRDAHFLWPN-RKYLSHMCSA-I"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-3-METHYL-GLUTACONYL-COA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02068"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3mob_c" sboTerm="SBO:0000247" id="M_3mob_c" name="3-Methyl-2-oxobutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H7O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4019,6 +4762,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3oxoadp_c" sboTerm="SBO:0000247" id="M_3oxoadp_c" name="3-Oxoadipate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H6O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H6O5</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3oxoadp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01170096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-KETO-ADIPATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM716"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RTGHRDFWYQHVFW-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00630"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3pg_c" sboTerm="SBO:0000247" id="M_3pg_c" name="3-Phospho-D-glycerate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C3H4O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4292,38 +5066,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_4abutn_e" sboTerm="SBO:0000247" id="M_4abutn_e" name="4-Aminobutanal" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C4H10NO">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C4H10NO</p>
-            <p>CHARGE: 1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_4abutn_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00555"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11960"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20316"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58264"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DZQLQEYLEYWJIB-UHFFFAOYSA-O"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01080"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60247"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-AMINO-BUTYRALDEHYDE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM422"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00434"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd12219"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_4abz_c" sboTerm="SBO:0000247" id="M_4abz_c" name="4-Aminobenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H6NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4514,6 +5256,110 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4cml_c" sboTerm="SBO:0000247" id="M_4cml_c" name="4-Carboxymuconolactone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H4O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H4O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4cml_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57979"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DHCUIDTZCMREHG-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00938"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4crsol_c" sboTerm="SBO:0000247" id="M_4crsol_c" name="P-Cresol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4crsol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IWDCLRJOBJJRNH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01042"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4h2opntn_c" sboTerm="SBO:0000247" id="M_4h2opntn_c" name="4-Hydroxy-2-oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4h2opntn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58222"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HFKQINMYQUXOCH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02258"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hadnt_c" sboTerm="SBO:0000247" id="M_4hadnt_c" name="4 Hydroxylamino 2 6 dinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HNO</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4hadnt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4hba_c" sboTerm="SBO:0000247" id="M_4hba_c" name="4-Hydroxy-benzyl alcohol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4568,6 +5414,222 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hbald_e" sboTerm="SBO:0000247" id="M_4hbald_e" name="4-Hydroxybenzaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbald_p" sboTerm="SBO:0000247" id="M_4hbald_p" name="4-Hydroxybenzaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbz_e" sboTerm="SBO:0000247" id="M_4hbz_e" name="4-Hydroxybenzoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbz_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2162213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44949"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FJKROLUGYXJWQN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-hydroxybenzoate"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbz_p" sboTerm="SBO:0000247" id="M_4hbz_p" name="4-Hydroxybenzoate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbz_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2162213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44949"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FJKROLUGYXJWQN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-hydroxybenzoate"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hoxpac_c" sboTerm="SBO:0000247" id="M_4hoxpac_c" name="4 Hydroxyphenylacetic acid C8H8O3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hoxpac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYPHENYLACETATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM485"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XQXPVVBIMDBYFF-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00489"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hoxpac_e" sboTerm="SBO:0000247" id="M_4hoxpac_e" name="4 Hydroxyphenylacetic acid C8H8O3" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hoxpac_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYPHENYLACETATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM485"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XQXPVVBIMDBYFF-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00489"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hoxpac_p" sboTerm="SBO:0000247" id="M_4hoxpac_p" name="4 Hydroxyphenylacetic acid C8H8O3" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hoxpac_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYPHENYLACETATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM485"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XQXPVVBIMDBYFF-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00489"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4hoxpacd_c" sboTerm="SBO:0000247" id="M_4hoxpacd_c" name="4-Hydroxyphenylacetaldehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5272,6 +6334,88 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5cmhm_c" sboTerm="SBO:0000247" id="M_5cmhm_c" name="5-Carboxymethyl-2-hydroxymuconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H5O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H5O7</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5cmhm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47961"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HJIBROWPWNLWHX-IKENXXAYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02572"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5cmhmsa_c" sboTerm="SBO:0000247" id="M_5cmhmsa_c" name="2-Hydroxy-5-carboxymethylmuconate-Semialdehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H6O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H6O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5cmhmsa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01030989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1628"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NLXIEJRQAIHYPN-IOBHVTPZSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02828"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5cohe_c" sboTerm="SBO:0000247" id="M_5cohe_c" name="5-Carboxy-2-oxohept-3-enedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H5O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H5O7</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5cohe_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM46951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_5d4dglcr_c" sboTerm="SBO:0000247" id="M_5d4dglcr_c" name="5 Dehydro 4 deoxy D glucarate C6H6O7" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H6O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5365,6 +6509,91 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5drib_c" sboTerm="SBO:0000247" id="M_5drib_c" name="5&apos;-deoxyribose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5drib_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4391"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WDRISBUVHBMJEF-MROZADKFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd17002"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5drib_e" sboTerm="SBO:0000247" id="M_5drib_e" name="5&apos;-deoxyribose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5drib_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4391"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WDRISBUVHBMJEF-MROZADKFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd17002"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5fthf_c" sboTerm="SBO:0000247" id="M_5fthf_c" name="5-Formyltetrahydrofolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C20H21N7O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C20H21N7O7</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5fthf_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57457"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:65340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:5-FORMYL-THF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1392"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VVIAGPKUTFNRDU-STQMWFEESA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02197"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_5mcsn_c" sboTerm="SBO:0000247" id="M_5mcsn_c" name="5-Methylcytosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H7N3O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5566,6 +6795,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5odhf2a_c" sboTerm="SBO:0000247" id="M_5odhf2a_c" name="5-Oxo-4,5-dihydrofuran-2-acetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H5O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5odhf2a_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-OXOADIPATE-ENOL-LACTONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM829"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZPEHSARSWGDCEX-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02255"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_5pg35pg_c" sboTerm="SBO:0000247" id="M_5pg35pg_c" name="5-Phosphoguanylyl(3-&gt;5)guanosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C20H23N10O15P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5754,29 +7013,38 @@
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+      <species metaid="M_CCbuttc_c" sboTerm="SBO:0000247" id="M_CCbuttc_c" name="Cis,cis-Butadiene-1,2,4-tricarboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C7H3O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C18H30N5O9</p>
-            <p>CHARGE: -1</p>
+            <p>FORMULA: C7H3O6</p>
+            <p>CHARGE: -3</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_LalaDgluMdapDala_c">
+            <rdf:Description rdf:about="#M_CCbuttc_c">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM59271"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57496"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KJOVGYUGXHIVAY-BXTBVDPRSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00856"/>
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               </bqbiol:is>
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-      <species metaid="M_LalaDgluMdapDala_e" sboTerm="SBO:0000247" id="M_LalaDgluMdapDala_e" name="L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C18H30N5O9">
+      <species metaid="M_LalaDgluMdapDala_c" sboTerm="SBO:0000247" id="M_LalaDgluMdapDala_c" name="L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C18H30N5O9">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C18H30N5O9</p>
@@ -5786,7 +7054,7 @@
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-            <rdf:Description rdf:about="#M_LalaDgluMdapDala_e">
+            <rdf:Description rdf:about="#M_LalaDgluMdapDala_c">
               <bqbiol:is>
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                   <rdf:li rdf:resource="https://identifiers.org/inchikey/BAPAFFOXTCMVCC-UHFFFAOYSA-M"/>
@@ -5841,6 +7109,27 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_LalaDgluMdap_e" sboTerm="SBO:0000247" id="M_LalaDgluMdap_e" name="L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C15H25N4O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C15H25N4O8</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_LalaDgluMdap_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15386"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_LalaDgluMdap_p" sboTerm="SBO:0000247" id="M_LalaDgluMdap_p" name="L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C15H25N4O8">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6518,6 +7807,23 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_R_3htd5coa_c" sboTerm="SBO:0000247" id="M_R_3htd5coa_c" name=" 3 hydroxy  5Z  tetradecenyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H56N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H56N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3htd5coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_aacoa_c" sboTerm="SBO:0000247" id="M_aacoa_c" name="Acetoacetyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6583,35 +7889,6 @@
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-      <species metaid="M_abt__L_e" sboTerm="SBO:0000247" id="M_abt__L_e" name="L Arabinitol C5H12O5" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H12O5">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H12O5</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_abt__L_e">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13073"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18403"/>
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-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HEBKCHPVOIAQTA-IMJSIDKUSA-N"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-ARABITOL"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM801"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00417"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ac_c" sboTerm="SBO:0000247" id="M_ac_c" name="Acetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C2H3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6851,40 +8128,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_acald_p" sboTerm="SBO:0000247" id="M_acald_p" name="Acetaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C2H4O">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C2H4O</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_acald_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113532"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113681"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113745"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29510"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13703"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15343"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22158"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2383"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40533"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00990"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IKHGUXGNUITLKF-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETALD"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM75"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00071"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_acamoxm_c" sboTerm="SBO:0000247" id="M_acamoxm_c" name="N Acetyl L 2 amino 6 oxopimelate C9H11NO6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11NO6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7107,6 +8350,44 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_acgam_c" sboTerm="SBO:0000247" id="M_acgam_c" name="N-Acetyl-D-glucosamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H15NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acgam_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1678743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2162231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17411"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:506227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-acetyl-D-glucosamine"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM143"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OVRNDRQMDRJTHS-RTRLPJTCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27608"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_acgam_e" sboTerm="SBO:0000247" id="M_acgam_e" name="N-Acetyl-D-glucosamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7340,66 +8621,6 @@
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         </annotation>
       </species>
-      <species metaid="M_acmum_e" sboTerm="SBO:0000247" id="M_acmum_e" name="N-Acetylmuramate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H18NO8">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C11H18NO8</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_acmum_e">
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-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21615"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60493"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NACMUR"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MNLRQHMNZILYPY-MKFCKLDKSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01757"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
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-      </species>
-      <species metaid="M_acmum_p" sboTerm="SBO:0000247" id="M_acmum_p" name="N-Acetylmuramate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H18NO8">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C11H18NO8</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_acmum_p">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28881"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NACMUR"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MNLRQHMNZILYPY-MKFCKLDKSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01757"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_acnam_c" sboTerm="SBO:0000247" id="M_acnam_c" name="N-Acetylneuraminate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H18NO9">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7482,6 +8703,102 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_acon_C_c" sboTerm="SBO:0000247" id="M_acon_C_c" name="Cis-Aconitate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H3O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H3O6</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acon_C_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32805"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GTZCVFVGUGFEME-IWQZZHSRSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CIS-ACONITATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00331"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_acon_C_e" sboTerm="SBO:0000247" id="M_acon_C_e" name="Cis-Aconitate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H3O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H3O6</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acon_C_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32805"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GTZCVFVGUGFEME-IWQZZHSRSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CIS-ACONITATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00331"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_acon_C_p" sboTerm="SBO:0000247" id="M_acon_C_p" name="Cis-Aconitate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H3O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H3O6</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acon_C_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32805"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GTZCVFVGUGFEME-IWQZZHSRSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CIS-ACONITATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00331"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_acorn_c" sboTerm="SBO:0000247" id="M_acorn_c" name="N2-Acetyl-L-ornithine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H14N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7657,6 +8974,66 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ad_c" sboTerm="SBO:0000247" id="M_ad_c" name="Acetamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C2H5NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H5NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ad_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49028"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DLFVBJFMPXGRIB-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETAMIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ad_e" sboTerm="SBO:0000247" id="M_ad_e" name="Acetamide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C2H5NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H5NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ad_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49028"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DLFVBJFMPXGRIB-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETAMIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ade_c" sboTerm="SBO:0000247" id="M_ade_c" name="Adenine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H5N5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9232,6 +10609,29 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_anhgm3p_c" sboTerm="SBO:0000247" id="M_anhgm3p_c" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H52N6O19">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H52N6O19</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhgm3p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM63489"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZWZMFRJKRXDGBE-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15397"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_anhgm3p_p" sboTerm="SBO:0000247" id="M_anhgm3p_p" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H52N6O19">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9255,6 +10655,29 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_anhgm4p_c" sboTerm="SBO:0000247" id="M_anhgm4p_c" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C37H57N7O20">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C37H57N7O20</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhgm4p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM63488"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZTOWCORYLXDAAW-JOUWMGDHSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15398"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_anhgm4p_p" sboTerm="SBO:0000247" id="M_anhgm4p_p" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C37H57N7O20">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9278,6 +10701,27 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_anhgm_c" sboTerm="SBO:0000247" id="M_anhgm_c" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C19H29N2O12">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H29N2O12</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhgm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15396"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_anhgm_e" sboTerm="SBO:0000247" id="M_anhgm_e" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C19H29N2O12">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9320,6 +10764,72 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_anhm3p_c" sboTerm="SBO:0000247" id="M_anhm3p_c" name="1,6-anhydrous-N-Acetylmuramyl-tripeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C26H39N5O14">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H39N5O14</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhm3p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KGVLFEPQSVUIRC-FYQNUYSYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM32389"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15400"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_anhm4p_c" sboTerm="SBO:0000247" id="M_anhm4p_c" name="1,6-anhydrous-N-Acetylmuramyl-tetrapeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C29H44N6O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C29H44N6O15</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhm4p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5405"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OUWAMZWZTFUVMV-NPLPHQDTSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15401"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_anhm_c" sboTerm="SBO:0000247" id="M_anhm_c" name="1,6-anhydrous-N-Acetylmuramate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H16NO7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H16NO7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15399"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_anth_c" sboTerm="SBO:0000247" id="M_anth_c" name="Anthranilate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H6NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9353,6 +10863,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_apc_e" sboTerm="SBO:0000247" id="M_apc_e" name="Ampicillin" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C16H19N3O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H19N3O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_apc_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_apc_p" sboTerm="SBO:0000247" id="M_apc_p" name="Ampicillin" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C16H19N3O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H19N3O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_apc_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_apoACP_c" sboTerm="SBO:0000247" id="M_apoACP_c" name="Apoprotein [acyl carrier protein]" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C373H583N94O136S2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9540,77 +11086,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_arachACP_c" sboTerm="SBO:0000247" id="M_arachACP_c" name="Eicosanoyl-ACP (n-C20:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C404H641N96O143PS3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C404H641N96O143PS3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_arachACP_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5733"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_arach_c" sboTerm="SBO:0000247" id="M_arach_c" name="Arachidic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C20H39O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C20H39O2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_arach_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06425"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32360"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02212"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010049"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ARACHIDIC_ACID"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2976"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VKOBVWXKNCXXDE-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03848"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_arachcoa_c" sboTerm="SBO:0000247" id="M_arachcoa_c" name="Arachidyl coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C41H70N7O17P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C41H70N7O17P3S</p>
-            <p>CHARGE: -4</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_arachcoa_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3215"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15931"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_arbt6p_c" sboTerm="SBO:0000247" id="M_arbt6p_c" name="Arbutin 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H15O10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9760,6 +11235,54 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_arg__L_p" sboTerm="SBO:0000247" id="M_arg__L_p" name="L-Arginine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C6H15N4O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H15N4O2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_arg__L_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-374064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:133495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ARG"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM70"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ODKSFYDXXFIFQN-BYPYZUCNSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19021"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_argsuc_c" sboTerm="SBO:0000247" id="M_argsuc_c" name="N(omega)-(L-Arginino)succinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H17N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9793,6 +11316,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ascb6p_c" sboTerm="SBO:0000247" id="M_ascb6p_c" name="L-ascorbate-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H7O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H7O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ascb6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:80368"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KIENGQUGHPTFGC-JLAZNSOCSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-ASCORBATE-6-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14905"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ascb__L_e" sboTerm="SBO:0000247" id="M_ascb__L_e" name="L-Ascorbate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ascb__L_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C20364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:38290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43473"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CIWBSHSKHKDKBQ-JLAZNSOCSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB29945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASCORBATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00059"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_asn__L_c" sboTerm="SBO:0000247" id="M_asn__L_c" name="L-Asparagine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9913,6 +11504,183 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_aso3_c" sboTerm="SBO:0000247" id="M_aso3_c" name="Arsenite" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H3AsO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H3AsO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_aso3_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5696216"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AQLMHYSWFMLWBS-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26385"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_aso3_e" sboTerm="SBO:0000247" id="M_aso3_e" name="Arsenite" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H3AsO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H3AsO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_aso3_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5696216"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AQLMHYSWFMLWBS-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26385"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_aso4_c" sboTerm="SBO:0000247" id="M_aso4_c" name="Arsenate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="HAsO4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HAsO4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_aso4_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48600"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DJHGAFSJWGLOIV-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ARSENATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01048"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_aso4_e" sboTerm="SBO:0000247" id="M_aso4_e" name="Arsenate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="HAsO4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HAsO4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_aso4_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48600"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DJHGAFSJWGLOIV-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ARSENATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01048"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_aso4_p" sboTerm="SBO:0000247" id="M_aso4_p" name="Arsenate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="HAsO4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HAsO4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_aso4_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48600"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DJHGAFSJWGLOIV-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ARSENATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01048"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_asp__L_c" sboTerm="SBO:0000247" id="M_asp__L_c" name="L-Aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10180,37 +11948,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_benzcoa_c" sboTerm="SBO:0000247" id="M_benzcoa_c" name="Benzoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C28H40N7O17P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C28H40N7O17P3S</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_benzcoa_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159447"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00512"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22735"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02252"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:BENZOYLCOA"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM240"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VEVJTUNLALKRNO-TYHXJLICSA-J"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00401"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_betald_c" sboTerm="SBO:0000247" id="M_betald_c" name="Betaine aldehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C5H12NO">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10874,6 +12611,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_catechol_c" sboTerm="SBO:0000247" id="M_catechol_c" name="Catechol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H6O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_catechol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:135158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:50524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CATECHOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Catechols"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM181"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YCIMNLLNPGFGHC-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01232"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cbasp_c" sboTerm="SBO:0000247" id="M_cbasp_c" name="N-Carbamoyl-L-aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H6N2O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11096,6 +12869,29 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cdpdhdec9eg_c" sboTerm="SBO:0000247" id="M_cdpdhdec9eg_c" name="CDP-1,2-dihexadec-9-enoylglycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C44H75N3O15P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C44H75N3O15P2</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cdpdhdec9eg_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:104012"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LBKBJHVQQNUXGQ-BQUKFSKHSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15418"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cdpdhdecg_c" sboTerm="SBO:0000247" id="M_cdpdhdecg_c" name="CDP-1,2-dihexadecanoylglycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C44H79N3O15P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11164,6 +12960,53 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cdpdtdec7eg_c" sboTerm="SBO:0000247" id="M_cdpdtdec7eg_c" name="CDP-1,2-ditetradec-7-enoylglycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C40H67N3O15P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C40H67N3O15P2</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cdpdtdec7eg_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:103990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4511"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VDJIEKQUDMPHPA-WNAWUNHNSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15422"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cdpdtdecg_c" sboTerm="SBO:0000247" id="M_cdpdtdecg_c" name="CDP-1,2-ditetradecanoylglycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C40H71N3O15P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C40H71N3O15P2</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cdpdtdecg_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:103211"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ICFWXMWHAMIZGF-WNAWUNHNSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-18388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15423"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cdpglyc_c" sboTerm="SBO:0000247" id="M_cdpglyc_c" name="CDPglycerol C12H19N3O13P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H19N3O13P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11672,6 +13515,52 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cit_p" sboTerm="SBO:0000247" id="M_cit_p" name="Citrate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H5O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H5O7</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cit_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-433138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:132362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:133748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3727"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:76049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00094"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KRKNYBCHXYNGOX-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CIT"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00137"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_citr__L_c" sboTerm="SBO:0000247" id="M_citr__L_c" name="L-Citrulline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H13N3O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11857,6 +13746,105 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cm_c" sboTerm="SBO:0000247" id="M_cm_c" name="Chloramphenicol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H12Cl2N2O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:94390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHLORAMPHENICOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4519"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WIIZWVCIJKGZOK-RKDXNWHRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00680"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cm_e" sboTerm="SBO:0000247" id="M_cm_e" name="Chloramphenicol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H12Cl2N2O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cm_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:94390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHLORAMPHENICOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4519"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WIIZWVCIJKGZOK-RKDXNWHRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00680"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cm_p" sboTerm="SBO:0000247" id="M_cm_p" name="Chloramphenicol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H12Cl2N2O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cm_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:94390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHLORAMPHENICOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4519"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WIIZWVCIJKGZOK-RKDXNWHRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00680"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cmcbtt_c" sboTerm="SBO:0000247" id="M_cmcbtt_c" name="Carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H48N5O13">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12155,6 +14143,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_co_p" sboTerm="SBO:0000247" id="M_co_p" name="Carbon monoxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_co_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBON-MONOXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM10881"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UGFAIRIUMAVXCW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00204"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_coa_c" sboTerm="SBO:0000247" id="M_coa_c" name="Coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C21H32N7O16P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12317,6 +14339,227 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_crn__D_c" sboTerm="SBO:0000247" id="M_crn__D_c" name="D-Carnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn__D_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM246"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-LURJTMIESA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10719"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn__D_p" sboTerm="SBO:0000247" id="M_crn__D_p" name="D-Carnitine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn__D_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM246"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-LURJTMIESA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10719"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn_c" sboTerm="SBO:0000247" id="M_crn_c" name="L-Carnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-201023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17126"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM173"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn_e" sboTerm="SBO:0000247" id="M_crn_e" name="L-Carnitine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-201023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM173"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn_p" sboTerm="SBO:0000247" id="M_crn_p" name="L-Carnitine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-201023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM173"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crncoa_c" sboTerm="SBO:0000247" id="M_crncoa_c" name="L-Carnitinyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C28H46N8O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C28H46N8O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -4.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crncoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BBRISSLDTUHWKG-PVMHLSDZSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C20750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-CARNITINYL-COA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1451"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cro4_c" sboTerm="SBO:0000247" id="M_cro4_c" name="Chromate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12458,6 +14701,109 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ctbt_c" sboTerm="SBO:0000247" id="M_ctbt_c" name="Crotonobetaine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H13NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H13NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ctbt_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48867"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUYHPGUANSLONG-SNAWJCMRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CROTONO-BETAINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02543"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ctbt_e" sboTerm="SBO:0000247" id="M_ctbt_e" name="Crotonobetaine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H13NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H13NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ctbt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48867"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUYHPGUANSLONG-SNAWJCMRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CROTONO-BETAINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02543"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ctbtcoa_c" sboTerm="SBO:0000247" id="M_ctbtcoa_c" name="Crotonobetainyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C28H44N8O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C28H44N8O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -3.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ctbtcoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C20748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CROTONOBETAINYL-COA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2363"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WAUPBDVHJXXZGW-HXPULJKESA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15441"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ctncoa_c" sboTerm="SBO:0000247" id="M_ctncoa_c" name="Crotonyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H40N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H40N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ctncoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_ctp_c" sboTerm="SBO:0000247" id="M_ctp_c" name="CTP C9H12N3O14P3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O14P3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12589,6 +14935,166 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cu_e" sboTerm="SBO:0000247" id="M_cu_e" name="Cu+" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Cu">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Cu</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cu_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49552"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CU+"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3568"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VMQMZMRVKUZKQL-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd30760"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cu_p" sboTerm="SBO:0000247" id="M_cu_p" name="Cu+" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Cu">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Cu</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cu_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49552"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CU+"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3568"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VMQMZMRVKUZKQL-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd30760"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cyan_c" sboTerm="SBO:0000247" id="M_cyan_c" name="Hydrogen cyanide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CHN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHN</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyan_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LELOWRISYMNNSU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cyan_e" sboTerm="SBO:0000247" id="M_cyan_e" name="Hydrogen cyanide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CHN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHN</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyan_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LELOWRISYMNNSU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cyan_p" sboTerm="SBO:0000247" id="M_cyan_p" name="Hydrogen cyanide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CHN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHN</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyan_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LELOWRISYMNNSU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cys__L_c" sboTerm="SBO:0000247" id="M_cys__L_c" name="L-Cysteine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12937,6 +15443,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dad_5_c" sboTerm="SBO:0000247" id="M_dad_5_c" name="5&apos;-Deoxyadenosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H13N5O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dad_5_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1130791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-947703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CH33ADO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM316"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XGYIMTFOTBMPFP-KQYNXXCUSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03091"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dadp_c" sboTerm="SBO:0000247" id="M_dadp_c" name="DADP C10H12N5O9P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O9P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12969,6 +15507,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dag_MRSA_c" sboTerm="SBO:0000247" id="M_dag_MRSA_c" name="1,2-diacyl-sn-glycerol 3-phosphate (MRSA)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C715H1133N170O253PS6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C715H1133N170O253PS6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_dag_MRSA_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_damp_c" sboTerm="SBO:0000247" id="M_damp_c" name="DAMP C10H12N5O6P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13128,6 +15683,45 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dcaACP_c" sboTerm="SBO:0000247" id="M_dcaACP_c" name="Decanoyl-ACP (n-C10:0ACP)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C394H621N96O143PS3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C394H621N96O143PS3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dcaACP_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90236"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dca_c" sboTerm="SBO:0000247" id="M_dca_c" name="Decanoate (n-C10:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C10H19O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H19O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dca_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162295"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dcacoa_c" sboTerm="SBO:0000247" id="M_dcacoa_c" name="Decanoyl-CoA (n-C10:0CoA)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C31H50N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13492,6 +16086,25 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ddcap_c" sboTerm="SBO:0000247" id="M_ddcap_c" name="Dodecanoly-phosphate (n-C12:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H24O5P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H24O5P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ddcap_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147470"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ddcoa_c" sboTerm="SBO:0000247" id="M_ddcoa_c" name="Dodecanoyl CoA  n C120CoA  C33H54N7O17P3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H54N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13815,6 +16428,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhcrn_c" sboTerm="SBO:0000247" id="M_dhcrn_c" name="3 dehydrocarnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H13NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H13NO3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_dhcrn_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_dhcrncoa_c" sboTerm="SBO:0000247" id="M_dhcrncoa_c" name="3 dehydrocarnitine coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C28H44N8O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C28H44N8O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_dhcrncoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_dhf_c" sboTerm="SBO:0000247" id="M_dhf_c" name="7,8-Dihydrofolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C19H19N7O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13848,6 +16495,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhgly_c" sboTerm="SBO:0000247" id="M_dhgly_c" name="Dehydroglycine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C2H2NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhgly_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1984"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/TVMUHOAONWHJBV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14545"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhlam_c" sboTerm="SBO:0000247" id="M_dhlam_c" name="Dihydrolipoamide C8H17NOS2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H17NOS2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14311,26 +16985,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_dmlgnc_c" sboTerm="SBO:0000247" id="M_dmlgnc_c" name="Dimethyl lignoceric acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H51O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C26H51O2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_dmlgnc_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7310"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15951"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_dmlz_c" sboTerm="SBO:0000247" id="M_dmlz_c" name="6,7-Dimethyl-8-(1-D-ribityl)lumazine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C13H19N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14823,6 +17477,90 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dxyl_c" sboTerm="SBO:0000247" id="M_dxyl_c" name="1-deoxy-D-xylulose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dxyl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGUZJYCAXLYZEE-RFZPGFLSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dxyl_e" sboTerm="SBO:0000247" id="M_dxyl_e" name="1-deoxy-D-xylulose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dxyl_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGUZJYCAXLYZEE-RFZPGFLSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dxyl_p" sboTerm="SBO:0000247" id="M_dxyl_p" name="1-deoxy-D-xylulose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dxyl_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGUZJYCAXLYZEE-RFZPGFLSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_e4p_c" sboTerm="SBO:0000247" id="M_e4p_c" name="D-Erythrose 4-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H7O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -15566,7 +18304,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_fald_e" sboTerm="SBO:0000247" id="M_fald_e" name="Formaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH2O">
+      <species metaid="M_fald_p" sboTerm="SBO:0000247" id="M_fald_p" name="Formaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH2O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: CH2O</p>
@@ -15576,7 +18314,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_fald_e">
+            <rdf:Description rdf:about="#M_fald_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-143501"/>
@@ -15602,41 +18340,39 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_fald_p" sboTerm="SBO:0000247" id="M_fald_p" name="Formaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH2O">
+      <species metaid="M_fbac_kt_c" sboTerm="SBO:0000247" id="M_fbac_kt_c" name="Ferribactin  Pputida KT2440 specific" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H48N10O15">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: CH2O</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C27H48N10O15</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_fald_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-143501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29478"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6797920"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-879250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00067"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24077"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:337763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01426"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBONYL-GROUP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:FORMALDEHYDE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM56"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WSFSSNUMVMOOMR-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00055"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_fbac_kt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_fbac_kt_p" sboTerm="SBO:0000247" id="M_fbac_kt_p" name="Ferribactin  Pputida KT2440 specific" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H48N10O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H48N10O15</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_fbac_kt_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
       </species>
       <species metaid="M_fdp_c" sboTerm="SBO:0000247" id="M_fdp_c" name="D-Fructose 1,6-bisphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H10O12P2">
         <notes>
@@ -15945,24 +18681,51 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_fe3pyovd_kt_e" sboTerm="SBO:0000247" id="M_fe3pyovd_kt_e" name="Ferrypyoverdine  P putida KT2440 specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27FeH48N10O15">
+      <species metaid="M_fe3dcit_e" sboTerm="SBO:0000247" id="M_fe3dcit_e" name="Fe(III)dicitrate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12FeH10O14">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C27FeH48N10O15</p>
+            <p>FORMULA: C12FeH10O14</p>
             <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -12.0</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#M_fe3pyovd_kt_e">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fe3dcit_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03725"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
       </species>
-      <species metaid="M_fe3pyovd_kt_p" sboTerm="SBO:0000247" id="M_fe3pyovd_kt_p" name="Ferrypyoverdine  P putida KT2440 specific" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27FeH48N10O15">
+      <species metaid="M_fe3dcit_p" sboTerm="SBO:0000247" id="M_fe3dcit_p" name="Fe(III)dicitrate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12FeH10O14">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12FeH10O14</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -12.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fe3dcit_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03725"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fe3pyovd_kt_e" sboTerm="SBO:0000247" id="M_fe3pyovd_kt_e" name="Ferrypyoverdine  P putida KT2440 specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27FeH48N10O15">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C27FeH48N10O15</p>
@@ -15971,7 +18734,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#M_fe3pyovd_kt_p">
+            <rdf:Description rdf:about="#M_fe3pyovd_kt_e">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -16601,6 +19364,55 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fru_p" sboTerm="SBO:0000247" id="M_fru_p" name="D-Fructose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fru_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C10906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15824"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20929"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-Fructopyranose"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:FRU"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Fructofuranose"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM175"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RFSUNEUAIZKAJO-VRPWFDPXSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27040"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_frulys_c" sboTerm="SBO:0000247" id="M_frulys_c" name="Fructoselysine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C12H25N2O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -16934,6 +19746,41 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_g3pc_c" sboTerm="SBO:0000247" id="M_g3pc_c" name="Sn-Glycero-3-phosphocholine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H20NO6P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1498750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:55397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:76433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-1-GLYCERO-PHOSPHORYLCHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM367"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SUHOQUVVVLNYQR-MRVPVSSYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_g3pc_e" sboTerm="SBO:0000247" id="M_g3pc_e" name="Sn-Glycero-3-phosphocholine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -16969,6 +19816,41 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_g3pc_p" sboTerm="SBO:0000247" id="M_g3pc_p" name="Sn-Glycero-3-phosphocholine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H20NO6P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pc_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1498750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:55397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:76433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-1-GLYCERO-PHOSPHORYLCHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM367"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SUHOQUVVVLNYQR-MRVPVSSYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_g3pe_c" sboTerm="SBO:0000247" id="M_g3pe_c" name="Sn-Glycero-3-phosphoethanolamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17896,6 +20778,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_glc_D_B_c" sboTerm="SBO:0000247" id="M_glc_D_B_c" name="Beta-D-Glucose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H12O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_glc_D_B_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_glc__D_c" sboTerm="SBO:0000247" id="M_glc__D_c" name="D-Glucose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -19513,6 +22412,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_glybcoa_c" sboTerm="SBO:0000247" id="M_glybcoa_c" name="Glycine betaine coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H42N8O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H42N8O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_glybcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_glyc3p_c" sboTerm="SBO:0000247" id="M_glyc3p_c" name="Glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H7O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20820,6 +23736,48 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_h2s_e" sboTerm="SBO:0000247" id="M_h2s_e" name="Hydrogen sulfide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H2S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H2S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_h2s_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1614532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1655881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1663154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-7046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HS"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89582"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RWSOTUBLDIXVET-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd24697"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_h_c" sboTerm="SBO:0000247" id="M_h_c" name="H+" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21016,6 +23974,98 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hco3_e" sboTerm="SBO:0000247" id="M_hco3_e" name="Bicarbonate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hco3_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-111627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-425425"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVKZGUZCCUSVTD-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hco3_p" sboTerm="SBO:0000247" id="M_hco3_p" name="Bicarbonate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hco3_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-111627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-425425"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVKZGUZCCUSVTD-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hcys__L_c" sboTerm="SBO:0000247" id="M_hcys__L_c" name="L-Homocysteine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21378,6 +24428,99 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hg2_c" sboTerm="SBO:0000247" id="M_hg2_c" name="Mercury  charged 2  Hg" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hg2_e" sboTerm="SBO:0000247" id="M_hg2_e" name="Mercury  charged 2  Hg" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hg2_p" sboTerm="SBO:0000247" id="M_hg2_p" name="Mercury  charged 2  Hg" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hibcoa_c" sboTerm="SBO:0000247" id="M_hibcoa_c" name=" S  3 Hydroxyisobutyryl CoA C25H38N7O18P3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H39N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21982,6 +25125,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hxan_p" sboTerm="SBO:0000247" id="M_hxan_p" name="Hypoxanthine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H4N4O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H4N4O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hxan_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5841"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FDGQSTZJBFJUBT-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00157"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HYPOXANTHINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00226"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hxcoa_c" sboTerm="SBO:0000247" id="M_hxcoa_c" name="Hexanoyl-CoA (n-C6:0CoA)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C27H42N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22160,6 +25334,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_icit_p" sboTerm="SBO:0000247" id="M_icit_p" name="Isocitrate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H5O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H5O7</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_icit_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14465"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24884"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89661"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ODBLHEXUDAPZAU-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00260"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_idon__L_c" sboTerm="SBO:0000247" id="M_idon__L_c" name="L-Idonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H11O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22307,6 +25513,48 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ile__L_p" sboTerm="SBO:0000247" id="M_ile__L_p" name="L-Isoleucine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H13NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ile__L_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30102"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AGPKZVBTJJNPAG-WHFBIAKZSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01100047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ILE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00322"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_imacp_c" sboTerm="SBO:0000247" id="M_imacp_c" name="3-(Imidazol-4-yl)-2-oxopropyl phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H7N2O5P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22446,6 +25694,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_indole_p" sboTerm="SBO:0000247" id="M_indole_p" name="Indole" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H7N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7N</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_indole_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-216547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00463"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00738"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:INDOLE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM377"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SIKJAQJRHWYJAI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00359"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_indpyr_c" sboTerm="SBO:0000247" id="M_indpyr_c" name="Indolepyruvate C11H8NO3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H8NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23004,6 +26285,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_lac6p_c" sboTerm="SBO:0000247" id="M_lac6p_c" name="Lactose-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H21O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H21O14P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_lac6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:79080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06789"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ITPHOIFCAFNCLL-QKKXKWKRSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03194"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_lac__D_c" sboTerm="SBO:0000247" id="M_lac__D_c" name="D-Lactate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23900,6 +27210,90 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_m_xyl_c" sboTerm="SBO:0000247" id="M_m_xyl_c" name="M-Xylene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_m_xyl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59810"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IVSZLXZYQVIEFR-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:META-XYLENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04446"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_m_xyl_e" sboTerm="SBO:0000247" id="M_m_xyl_e" name="M-Xylene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_m_xyl_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59810"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IVSZLXZYQVIEFR-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:META-XYLENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04446"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_m_xyl_p" sboTerm="SBO:0000247" id="M_m_xyl_p" name="M-Xylene" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_m_xyl_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59810"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IVSZLXZYQVIEFR-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:META-XYLENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04446"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_madg_e" sboTerm="SBO:0000247" id="M_madg_e" name="Alpha Methyl D glucoside C7H14O6" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H14O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24209,6 +27603,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_malt_p" sboTerm="SBO:0000247" id="M_malt_p" name="Maltose C12H22O11" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-868706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22463"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00275"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUBGYTABKSRVRQ-PICCSMPSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALPHA-MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00665"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_malthp_c" sboTerm="SBO:0000247" id="M_malthp_c" name="Maltoheptaose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C42H72O36">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24561,6 +27995,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_man_p" sboTerm="SBO:0000247" id="M_man_p" name="D-Mannose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_man_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-429579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6799594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-964752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-mannopyranose"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM182"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WQZGKKKJIJFFOK-QTVWNMPRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27437"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mana_c" sboTerm="SBO:0000247" id="M_mana_c" name="D-Mannonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H11O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24613,26 +28083,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_mbhn_c" sboTerm="SBO:0000247" id="M_mbhn_c" name="Methyl behenic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C23H45O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C23H45O2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_mbhn_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15971"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_melib_c" sboTerm="SBO:0000247" id="M_melib_c" name="Melibiose C12H22O11" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26453,6 +29903,54 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_n5horn_c" sboTerm="SBO:0000247" id="M_n5horn_c" name="N5 hydroxyL ornithine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H12N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H12N2O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_n5horn_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_n6all26d_c" sboTerm="SBO:0000247" id="M_n6all26d_c" name="N6-Acetyl-LL-2,6-diaminoheptanedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H15N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H15N2O5</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_n6all26d_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7410"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KYVLWJXMCBZDRL-BQBZGAKWSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02685"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_na1_c" sboTerm="SBO:0000247" id="M_na1_c" name="Sodium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Na">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26597,42 +30095,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_nac_e" sboTerm="SBO:0000247" id="M_nac_e" name="Nicotinate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C6H4NO2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_nac_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-197230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869604"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00253"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14650"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15940"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00049"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01488"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NIACINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM274"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PVNIIMVLHYAWGP-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00218"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_nad_c" sboTerm="SBO:0000247" id="M_nad_c" name="Nicotinamide adenine dinucleotide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27209,6 +30671,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nicrns_c" sboTerm="SBO:0000247" id="M_nicrns_c" name="Nicotinate D-ribonucleoside" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H13NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H13NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nicrns_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1915"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PUEDDPCUCPRQNY-ZYUZMQFOSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03471"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_nicrnt_c" sboTerm="SBO:0000247" id="M_nicrnt_c" name="Nicotinate D-ribonucleotide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C11H12NO9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27648,6 +31141,55 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_o2_p" sboTerm="SBO:0000247" id="M_o2_p" name="O2 O2" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_o2_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1131511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1236709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-352327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5668566"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:OXYGEN-MOLECULE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYMOFIZGZYHOMD-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00007"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_o2s_c" sboTerm="SBO:0000247" id="M_o2s_c" name="Superoxide anion" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28147,6 +31689,34 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_op4en_c" sboTerm="SBO:0000247" id="M_op4en_c" name="2-Oxopent-4-enoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H5O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_op4en_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:OXOPENTENOATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM312"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NOXRYJAWRSNUJD-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27712"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_orn__D_c" sboTerm="SBO:0000247" id="M_orn__D_c" name="D-Ornithine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C5H13N2O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28554,6 +32124,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_oxadpcoa_c" sboTerm="SBO:0000247" id="M_oxadpcoa_c" name="3-Oxoadipyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-5" fbc:chemicalFormula="C27H37N7O20P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H37N7O20P3S</p>
+            <p>CHARGE: -5</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_oxadpcoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-KETO-ADIPYL-COA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1264"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VKKKAAPGXHWXOO-BIEWRJSYSA-I"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_p3pyr_c" sboTerm="SBO:0000247" id="M_p3pyr_c" name="3-Phosphonopyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C3H5O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28571,6 +32172,93 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_p_xyl_c" sboTerm="SBO:0000247" id="M_p_xyl_c" name="P-methyltoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_p_xyl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3685"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/URLKBWYHVLBVBO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_p_xyl_e" sboTerm="SBO:0000247" id="M_p_xyl_e" name="P-methyltoluene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_p_xyl_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3685"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/URLKBWYHVLBVBO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_p_xyl_p" sboTerm="SBO:0000247" id="M_p_xyl_p" name="P-methyltoluene" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_p_xyl_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3685"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/URLKBWYHVLBVBO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pa120_c" sboTerm="SBO:0000247" id="M_pa120_c" name="1,2-didodecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H51O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28613,6 +32301,64 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pa140_c" sboTerm="SBO:0000247" id="M_pa140_c" name="1,2-ditetradecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H59O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C31H59O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa140_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:83321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:83550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:84266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP10010026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM51017"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OZSITQMWYBNPMW-GDLZYMKVSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26150"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pa140_p" sboTerm="SBO:0000247" id="M_pa140_p" name="1,2-ditetradecanoyl-sn-glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H59O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C31H59O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa140_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:83321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:83550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:84266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP10010026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM51017"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OZSITQMWYBNPMW-GDLZYMKVSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26150"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pa141_c" sboTerm="SBO:0000247" id="M_pa141_c" name="1,2-ditetradec-7-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H55O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28713,6 +32459,48 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pa161_c" sboTerm="SBO:0000247" id="M_pa161_c" name="1,2-dihexadec-9-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H63O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H63O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa161_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15525"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pa161_p" sboTerm="SBO:0000247" id="M_pa161_p" name="1,2-dihexadec-9-enoyl-sn-glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H63O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H63O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa161_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15525"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pa180_c" sboTerm="SBO:0000247" id="M_pa180_c" name="1,2-dioctadecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C39H75O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29069,115 +32857,115 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
-      <species metaid="M_pdima_c" sboTerm="SBO:0000247" id="M_pdima_c" name="Phthiocerol dimycocerosate A (Mtb)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C96H189O5">
+      <species metaid="M_pdx5p_c" sboTerm="SBO:0000247" id="M_pdx5p_c" name="Pyridoxine 5&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H10NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C96H189O5</p>
+            <p>FORMULA: C8H10NO6P</p>
+            <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pdima_c">
+            <rdf:Description rdf:about="#M_pdx5p_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-964952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYRIDOXINE-5P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM454"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WHOMFKWHIQZTHY-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00478"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_pdima_e" sboTerm="SBO:0000247" id="M_pdima_e" name="Phthiocerol dimycocerosate A (Mtb)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C96H189O5">
+      <species metaid="M_pe120_c" sboTerm="SBO:0000247" id="M_pe120_c" name="Phosphatidylethanolamine (didodecanoyl, n-C12:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C29H58NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C96H189O5</p>
+            <p>FORMULA: C29H58NO8P</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pdima_e">
+            <rdf:Description rdf:about="#M_pe120_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP02010098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2858"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_pdx5p_c" sboTerm="SBO:0000247" id="M_pdx5p_c" name="Pyridoxine 5&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H10NO6P">
+      <species metaid="M_pe120_p" sboTerm="SBO:0000247" id="M_pe120_p" name="Phosphatidylethanolamine (didodecanoyl, n-C12:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C29H58NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C8H10NO6P</p>
-            <p>CHARGE: -2</p>
+            <p>FORMULA: C29H58NO8P</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pdx5p_c">
+            <rdf:Description rdf:about="#M_pe120_p">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-964952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26430"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28803"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45202"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58589"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8672"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYRIDOXINE-5P"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM454"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WHOMFKWHIQZTHY-UHFFFAOYSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP02010098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2858"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_pe120_c" sboTerm="SBO:0000247" id="M_pe120_c" name="Phosphatidylethanolamine (didodecanoyl, n-C12:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C29H58NO8P">
+      <species metaid="M_pe141_c" sboTerm="SBO:0000247" id="M_pe141_c" name="Phosphatidylethanolamine (ditetradec-7-enoyl, n-C14:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C33H62NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C29H58NO8P</p>
+            <p>FORMULA: C33H62NO8P</p>
             <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pe120_c">
+            <rdf:Description rdf:about="#M_pe141_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP02010098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17088"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3693"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_pe120_p" sboTerm="SBO:0000247" id="M_pe120_p" name="Phosphatidylethanolamine (didodecanoyl, n-C12:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C29H58NO8P">
+      <species metaid="M_pe141_p" sboTerm="SBO:0000247" id="M_pe141_p" name="Phosphatidylethanolamine (ditetradec-7-enoyl, n-C14:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C33H62NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C29H58NO8P</p>
+            <p>FORMULA: C33H62NO8P</p>
             <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pe120_p">
+            <rdf:Description rdf:about="#M_pe141_p">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP02010098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17088"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3693"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -29244,6 +33032,56 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pe161_c" sboTerm="SBO:0000247" id="M_pe161_c" name="Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C37H70NO8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C37H70NO8P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pe161_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB05342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB08957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP02010108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM71458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd29055"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pe161_p" sboTerm="SBO:0000247" id="M_pe161_p" name="Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C37H70NO8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C37H70NO8P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pe161_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB05342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB08957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP02010108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM71458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd29055"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pe180_c" sboTerm="SBO:0000247" id="M_pe180_c" name="Phosphatidylethanolamine (dioctadecanoyl, n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C41H82NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29989,50 +33827,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_phthdl_c" sboTerm="SBO:0000247" id="M_phthdl_c" name="Phthiodolone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H61O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C31H61O3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_phthdl_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7676"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16018"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_phthiocerol_c" sboTerm="SBO:0000247" id="M_phthiocerol_c" name="Phthiocerol A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C32H65O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C32H65O3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_phthiocerol_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59240"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HLQGVSDAPGNBGG-ITGKQZKFSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA05000692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Phthiocerols"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM75251"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16019"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_phxa2coa_c" sboTerm="SBO:0000247" id="M_phxa2coa_c" name="Phenyl hexa 2 enoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H42N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -30595,32 +34389,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_ppap_e" sboTerm="SBO:0000247" id="M_ppap_e" name="Propanoyl phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H5O5P">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C3H5O5P</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ppap_e">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58933"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8478"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FMNMEQSRDWIBFO-UHFFFAOYSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROPIONYL-P"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1499"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01844"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ppbng_c" sboTerm="SBO:0000247" id="M_ppbng_c" name="Porphobilinogen" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C10H13N2O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31029,68 +34797,6 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
-      <species metaid="M_pqq_p" sboTerm="SBO:0000247" id="M_pqq_p" name="Pyrroloquinoline-quinone" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H2N2O8">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C14H2N2O8</p>
-            <p>SBOTerm: SBO:0000247</p>
-            <p>CHARGE: -4.0</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pqq_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18315"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45251"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58442"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7881"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13636"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PQQ"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MMXZSJMASHPLLR-UHFFFAOYSA-K"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM601"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00097"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_pqqh2_p" sboTerm="SBO:0000247" id="M_pqqh2_p" name="Reduced pyrroloquinoline-quinone" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C14H4N2O8">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C14H4N2O8</p>
-            <p>CHARGE: -4</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_pqqh2_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18356"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26526"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM765"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QZMUBZJJJKIXKV-UHFFFAOYSA-J"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00986"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_pram_c" sboTerm="SBO:0000247" id="M_pram_c" name="5-Phospho-beta-D-ribosylamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H11NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31456,6 +35162,131 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pro__L_p" sboTerm="SBO:0000247" id="M_pro__L_p" name="L-Proline" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H9NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pro__L_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-352033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379717"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:184637"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32864"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PRO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM114"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ONIBWKKTOPOVIA-BYPYZUCNSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15140"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_progly_c" sboTerm="SBO:0000247" id="M_progly_c" name="L-Prolinylglycine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H12N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H12N2O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_progly_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:73594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7481"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RNKSNIBMTUYWSH-YFKPBYRVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15551"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_progly_e" sboTerm="SBO:0000247" id="M_progly_e" name="L-Prolinylglycine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H12N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H12N2O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_progly_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:73594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7481"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RNKSNIBMTUYWSH-YFKPBYRVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15551"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_progly_p" sboTerm="SBO:0000247" id="M_progly_p" name="L-Prolinylglycine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H12N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H12N2O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_progly_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:73594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7481"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RNKSNIBMTUYWSH-YFKPBYRVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15551"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_prohisglu_c" sboTerm="SBO:0000247" id="M_prohisglu_c" name="Proline-histidine-glutamine tripeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H24N5O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31557,6 +35388,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ps141_c" sboTerm="SBO:0000247" id="M_ps141_c" name="Phosphatidylserine (ditetradec-7-enoyl, n-C14:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H61NO10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H61NO10P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ps141_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7664"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ps160_c" sboTerm="SBO:0000247" id="M_ps160_c" name="Phosphatidylserine (dihexadecanoyl, n-C16:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C38H73NO10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31585,6 +35436,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ps161_c" sboTerm="SBO:0000247" id="M_ps161_c" name="Phosphatidylserine (dihexadec-9-enoyl, n-C16:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C38H69NO10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C38H69NO10P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ps161_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7660"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ps180_c" sboTerm="SBO:0000247" id="M_ps180_c" name="Phosphatidylserine (dioctadecanoyl, n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H81NO10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31612,6 +35483,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ps181_c" sboTerm="SBO:0000247" id="M_ps181_c" name="Phosphatidylserine (dioctadec-11-enoyl, n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H77NO10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42H77NO10P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ps181_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7662"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_psd5p_c" sboTerm="SBO:0000247" id="M_psd5p_c" name="Pseudouridine 5  phosphate C9H11N2O9P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31749,6 +35640,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ptdoh_MRSA_c" sboTerm="SBO:0000247" id="M_ptdoh_MRSA_c" name="Phosphatidic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C715H1132N170O256P2S6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C715H1132N170O256P2S6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ptdoh_MRSA_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_ptrc_c" sboTerm="SBO:0000247" id="M_ptrc_c" name="Putrescine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C4H14N2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31854,6 +35762,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pvdiq_p" sboTerm="SBO:0000247" id="M_pvdiq_p" name="Pyoverdine precursor I" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H48N10O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H48N10O15</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_pvdiq_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_pyam5p_c" sboTerm="SBO:0000247" id="M_pyam5p_c" name="Pyridoxamine 5&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H12N2O5P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32927,6 +36852,31 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_s_e" sboTerm="SBO:0000247" id="M_s_e" name="Sulfur" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_s_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Elemental-Sulfur"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NINIDFKCEFEMDL-UHFFFAOYSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salc_c" sboTerm="SBO:0000247" id="M_salc_c" name="Salicylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32993,6 +36943,44 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_salchs1_c" sboTerm="SBO:0000247" id="M_salchs1_c" name="Salmochelin-S1" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H29N2O16">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H29N2O16</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs1_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM148507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs2_c" sboTerm="SBO:0000247" id="M_salchs2_c" name="Salmochelin-S2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H47N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42H47N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146229"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs2_e" sboTerm="SBO:0000247" id="M_salchs2_e" name="Salmochelin-S2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H48N3O26">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33031,6 +37019,44 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_salchs2fe_c" sboTerm="SBO:0000247" id="M_salchs2fe_c" name="Salmochelin-S2-Fe-III" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH48N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH48N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2fe_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs2fe_p" sboTerm="SBO:0000247" id="M_salchs2fe_p" name="Salmochelin-S2-Fe-III" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH48N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH48N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2fe_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs4_c" sboTerm="SBO:0000247" id="M_salchs4_c" name="Salmochelin-S4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H46N3O25">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33069,6 +37095,101 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_salchs4fe_e" sboTerm="SBO:0000247" id="M_salchs4fe_e" name="Salmochelin-S4-Fe-III" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH46N3O25">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH46N3O25</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs4fe_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146231"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs4fe_p" sboTerm="SBO:0000247" id="M_salchs4fe_p" name="Salmochelin-S4-Fe-III" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH46N3O25">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH46N3O25</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs4fe_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146231"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchsx_c" sboTerm="SBO:0000247" id="M_salchsx_c" name="Salmochelin-SX" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H20NO11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H20NO11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchsx_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146623"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchsx_e" sboTerm="SBO:0000247" id="M_salchsx_e" name="Salmochelin-SX" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H20NO11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H20NO11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchsx_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146623"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchsx_p" sboTerm="SBO:0000247" id="M_salchsx_p" name="Salmochelin-SX" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H20NO11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H20NO11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchsx_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146623"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salcn6p_c" sboTerm="SBO:0000247" id="M_salcn6p_c" name="Salicin 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C13H17O10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33338,6 +37459,99 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_sel_c" sboTerm="SBO:0000247" id="M_sel_c" name="Selenate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O4Se">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O4Se</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sel_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5357662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SELENATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2282"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QYHFIVBSNOWOCQ-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03396"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_sel_e" sboTerm="SBO:0000247" id="M_sel_e" name="Selenate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O4Se">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O4Se</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sel_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5357662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SELENATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2282"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QYHFIVBSNOWOCQ-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03396"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_sel_p" sboTerm="SBO:0000247" id="M_sel_p" name="Selenate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O4Se">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O4Se</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sel_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5357662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SELENATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2282"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QYHFIVBSNOWOCQ-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03396"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ser__D_c" sboTerm="SBO:0000247" id="M_ser__D_c" name="D-Serine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H7NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34658,6 +38872,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_sucr_p" sboTerm="SBO:0000247" id="M_sucr_p" name="Sucrose C12H22O11" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sucr_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9314"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CZMRCDWAGMRECN-UGDNZRGBSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SUCROSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00076"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_sucsal_c" sboTerm="SBO:0000247" id="M_sucsal_c" name="Succinic semialdehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34840,26 +39087,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_tamocta_c" sboTerm="SBO:0000247" id="M_tamocta_c" name="Tetra-methyl octacosanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C32H63O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C32H63O2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_tamocta_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5940"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16038"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_tartr__L_c" sboTerm="SBO:0000247" id="M_tartr__L_c" name="L-tartrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35044,6 +39271,108 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_tcynt_c" sboTerm="SBO:0000247" id="M_tcynt_c" name="Thiocyanate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CNS</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tcynt_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HSCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZMZDMBWJUHKJPS-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_tcynt_e" sboTerm="SBO:0000247" id="M_tcynt_e" name="Thiocyanate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CNS</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tcynt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HSCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZMZDMBWJUHKJPS-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_tcynt_p" sboTerm="SBO:0000247" id="M_tcynt_p" name="Thiocyanate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CNS</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tcynt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HSCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZMZDMBWJUHKJPS-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_td2coa_c" sboTerm="SBO:0000247" id="M_td2coa_c" name="Trans-Tetradec-2-enoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H56N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35148,6 +39477,26 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_tdeACP_c" sboTerm="SBO:0000247" id="M_tdeACP_c" name="Cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C398H627N96O143PS3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C398H627N96O143PS3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tdeACP_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162426"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_tdecoa_c" sboTerm="SBO:0000247" id="M_tdecoa_c" name="Tetradecenoyl-CoA (n-C14:1CoA)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H56N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35168,6 +39517,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_tded5_2_coa_c" sboTerm="SBO:0000247" id="M_tded5_2_coa_c" name="Trans cis tetradeca 2 5 dienoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H54N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H54N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tded5_2_coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_thdp_c" sboTerm="SBO:0000247" id="M_thdp_c" name="2,3,4,5-Tetrahydrodipicolinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C7H7NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35640,20 +40006,115 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_tmhexc_c" sboTerm="SBO:0000247" id="M_tmhexc_c" name="Tri-methyl hexacosanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C29H57O2">
+      <species metaid="M_tnt_c" sboTerm="SBO:0000247" id="M_tnt_c" name="2 4 6 Trinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C29H57O2</p>
+            <p>FORMULA: NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tnt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tnt_e" sboTerm="SBO:0000247" id="M_tnt_e" name="2 4 6 Trinitrotoluene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tnt_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tnt_p" sboTerm="SBO:0000247" id="M_tnt_p" name="2 4 6 Trinitrotoluene" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tnt_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tntmdh_c" sboTerm="SBO:0000247" id="M_tntmdh_c" name="2 4 6 trinitrotoluene  Meisenheimer dihydride complex" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H2NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H2NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tntmdh_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tntmmh_c" sboTerm="SBO:0000247" id="M_tntmmh_c" name="2 4 6 Trinitrotoluene Meisenheimer monohydride complex" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HNO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tntmmh_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tol_c" sboTerm="SBO:0000247" id="M_tol_c" name="Toluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_tmhexc_c">
+            <rdf:Description rdf:about="#M_tol_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB34168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TOLUENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM889"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YXFVVABEGXRONW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01034"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -36263,6 +40724,121 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ttdceap_c" sboTerm="SBO:0000247" id="M_ttdceap_c" name="Tetradecanoyl-phosphate (n-C14:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H26O5P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H26O5P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ttdceap_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147614"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ttrcyc_c" sboTerm="SBO:0000247" id="M_ttrcyc_c" name="Tetracycline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C22H24N2O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ttrcyc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97613"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OFVLGDICTFRJMM-WESIUVDSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ttrcyc_e" sboTerm="SBO:0000247" id="M_ttrcyc_e" name="Tetracycline" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C22H24N2O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ttrcyc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97613"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OFVLGDICTFRJMM-WESIUVDSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ttrcyc_p" sboTerm="SBO:0000247" id="M_ttrcyc_p" name="Tetracycline" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C22H24N2O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ttrcyc_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97613"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OFVLGDICTFRJMM-WESIUVDSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_tyr__L_c" sboTerm="SBO:0000247" id="M_tyr__L_c" name="L-Tyrosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H11NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36862,6 +41438,27 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_um4p_c" sboTerm="SBO:0000247" id="M_um4p_c" name="UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C38H56N8O27P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C38H56N8O27P2</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_um4p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15579"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ump_c" sboTerm="SBO:0000247" id="M_ump_c" name="UMP C9H11N2O9P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37356,6 +41953,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_vaccoa_c" sboTerm="SBO:0000247" id="M_vaccoa_c" name="Vinylacetyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H36N7O17P3S</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_vaccoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2159"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UATIGEHITDTAGF-CITAKDKDSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01557"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_val__L_c" sboTerm="SBO:0000247" id="M_val__L_c" name="L-Valine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37450,6 +42077,53 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_val__L_p" sboTerm="SBO:0000247" id="M_val__L_p" name="L-Valine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_val__L_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32852"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:87977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB34366"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KZSNJWFQEVHDMF-BYPYZUCNSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01100046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VAL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15141"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xan_c" sboTerm="SBO:0000247" id="M_xan_c" name="Xanthine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H4N4O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37514,6 +42188,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xan_p" sboTerm="SBO:0000247" id="M_xan_p" name="Xanthine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H4N4O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H4N4O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xan_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17712"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LRFVTYWOQMYALW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XANTHINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00309"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xmp_c" sboTerm="SBO:0000247" id="M_xmp_c" name="Xanthosine 5&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H11N4O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37547,6 +42253,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xtp_c" sboTerm="SBO:0000247" id="M_xtp_c" name="XTP" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O15P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O15P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00700"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CAEFEWVYEZABLA-UUOKFMHZSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XTP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00530"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xtsn_c" sboTerm="SBO:0000247" id="M_xtsn_c" name="Xanthosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37638,6 +42373,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xu5p__L_c" sboTerm="SBO:0000247" id="M_xu5p__L_c" name="L-Xylulose 5-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xu5p__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6328"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FNZLKVNUWIIPSJ-WHFBIAKZSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-XYLULOSE-5-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xyl__D_c" sboTerm="SBO:0000247" id="M_xyl__D_c" name="D-Xylose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37698,6 +42462,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xyl__D_p" sboTerm="SBO:0000247" id="M_xyl__D_p" name="D-Xylose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xyl__D_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2090063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:65327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D06346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-Xylopyranose"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM348"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SRBFZHDQGSBBOR-IOVATXLUSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00154"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xylu__D_c" sboTerm="SBO:0000247" id="M_xylu__D_c" name="D-Xylulose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37872,6 +42666,30 @@
           <speciesReference species="M_12dgr120_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_12DGR140tipp" sboTerm="SBO:0000185" id="R_12DGR140tipp" name="1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_12DGR140tipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94676"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr140_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr140_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_12DGR141tipp" sboTerm="SBO:0000185" id="R_12DGR141tipp" name="1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37920,6 +42738,30 @@
           <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_12DGR161tipp" sboTerm="SBO:0000185" id="R_12DGR161tipp" name="1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_12DGR161tipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94679"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr161_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr161_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_12DGR180tipp" sboTerm="SBO:0000185" id="R_12DGR180tipp" name="1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37968,6 +42810,31 @@
           <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_12PPDRDH" sboTerm="SBO:0000176" id="R_12PPDRDH" name=" R Propane 1 2 diol dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_12PPDRDH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94682"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12ppd__R_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_13PPDH2" sboTerm="SBO:0000176" id="R_13PPDH2" name="1,3-propanediol dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38047,6 +42914,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_1P2CBXLR" sboTerm="SBO:0000176" id="R_1P2CBXLR" name="Delta1 piperideine 2 carboxylate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -38167,6 +43037,30 @@
           <speciesReference species="M_2agpe120_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_2AGPE141tipp" sboTerm="SBO:0000185" id="R_2AGPE141tipp" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2AGPE141tipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2agpe141_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2agpe141_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2AGPE160tipp" sboTerm="SBO:0000185" id="R_2AGPE160tipp" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:0) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38192,6 +43086,30 @@
           <speciesReference species="M_2agpe160_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_2AGPE161tipp" sboTerm="SBO:0000185" id="R_2AGPE161tipp" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2AGPE161tipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94754"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2agpe161_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2agpe161_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2AGPE180tipp" sboTerm="SBO:0000185" id="R_2AGPE180tipp" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:0) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38269,34 +43187,6 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_2AGPEAT181" sboTerm="SBO:0000176" id="R_2AGPEAT181" name="2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_2AGPEAT181">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94763"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_2agpe181_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdcea_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_2AGPG120tipp" sboTerm="SBO:0000185" id="R_2AGPG120tipp" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38801,6 +43691,59 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU34680"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2DHGLCNkt_tpp" sboTerm="SBO:0000185" id="R_2DHGLCNkt_tpp" name="2 ketogluconate transporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2DHGLCNkt_tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12783"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_2DHGLCNtex" sboTerm="SBO:0000185" id="R_2DHGLCNtex" name="Ketogluconate transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2DHGLCNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13791"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dhglcn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2HXMPt6" sboTerm="SBO:0000185" id="R_2HXMPt6" name="2  hydroxymethyl phenol transport inout via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38892,6 +43835,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30820"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_34DHPACDO" sboTerm="SBO:0000176" id="R_34DHPACDO" name="3 4 dihydroxyphenylacetate 2 3 dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_34DHPACDO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.13.11.15-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02366"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_34dhpacet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cmhmsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_3AMPt6" sboTerm="SBO:0000185" id="R_3AMPt6" name="3  AMP transport inout via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39124,6 +44101,75 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU07840"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_3OADPCOAT" sboTerm="SBO:0000176" id="R_3OADPCOAT" name="3-oxoadipate CoA-transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_3OADPCOAT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.3.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-OXOADIPATE-COA-TRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94940"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02143"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_3OXCOAT" sboTerm="SBO:0000176" id="R_3OXCOAT" name="3-oxoadipyl-CoA thiolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_3OXCOAT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.16"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-3641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00598"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_3PEPTabcpp" sboTerm="SBO:0000185" id="R_3PEPTabcpp" name="Tripeptide (LalaDgluMdap) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39163,6 +44209,31 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_3PEPTtex" sboTerm="SBO:0000185" id="R_3PEPTtex" name="LalaDgluMdap (tripeptide) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_3PEPTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94971"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08004"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_LalaDgluMdap_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_LalaDgluMdap_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_3UMPt6" sboTerm="SBO:0000185" id="R_3UMPt6" name="3  UMP transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39222,6 +44293,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU37960"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4HBALDtex" sboTerm="SBO:0000185" id="R_4HBALDtex" name="4-hydroxybenzaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HBALDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95006"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hbald_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_4HBAt" sboTerm="SBO:0000185" id="R_4HBAt" name="MNXR68734" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39244,6 +44345,173 @@
           <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_4HBZtex" sboTerm="SBO:0000185" id="R_4HBZtex" name="4-Hydroxybenzoate transport (extracellular)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HBZtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12787"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hbz_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hbz_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4HOXPACMOF" sboTerm="SBO:0000176" id="R_4HOXPACMOF" name="4 hydroxyphenylacetate 3 monooxygenase FADH2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HOXPACMOF">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.14.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95018"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hphac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhpha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU18620"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4HOXPACMOF_1" sboTerm="SBO:0000176" id="R_4HOXPACMOF_1" name="4 hydroxyphenylacetate 3 monooxygenase FADH2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HOXPACMOF_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.14.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-8505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR137946"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hoxpac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhpacet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU18620"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4HOXPACMON" sboTerm="SBO:0000176" id="R_4HOXPACMON" name="4 hydroxyphenylacetate 3 monooxygenase nadh" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HOXPACMON">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.14.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR137947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01945"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hoxpac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhpacet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU18620"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4HOXPACt2pp_1" sboTerm="SBO:0000185" id="R_4HOXPACt2pp_1" name="4 hydroxyphenylacetate transport in via proton symport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HOXPACt2pp_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR137948"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10559"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hoxpac_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hoxpac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_4HPRODCabcpp" sboTerm="SBO:0000185" id="R_4HPRODCabcpp" name="Cis 4 Hydroxy D proline transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39491,7 +44759,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_4PEPTtex" sboTerm="SBO:0000185" id="R_4PEPTtex" name="LalaDgluMdapDala (pentapeptide) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_4hoxpactex" sboTerm="SBO:0000185" id="R_4hoxpactex" name="4 hydroxyphenylacetate transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -39499,21 +44767,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_4PEPTtex">
+            <rdf:Description rdf:about="#R_4hoxpactex">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR137954"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_LalaDgluMdapDala_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hoxpac_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_LalaDgluMdapDala_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hoxpac_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_5DGLCN_Et" sboTerm="SBO:0000185" id="R_5DGLCN_Et" name="5-Dehydro-D-gluconate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -39538,7 +44809,40 @@
           <speciesReference species="M_5dglcn_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_A6PAG2" sboTerm="SBO:0000176" id="R_A6PAG2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_5DOAN" sboTerm="SBO:0000176" id="R_5DOAN" name="5&apos;-deoxyadenosine nuclosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_5DOAN">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13649"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5drib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_6PGALSZ_1" sboTerm="SBO:0000176" id="R_6PGALSZ_1" name="6-phospho-beta-galactosidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -39546,7 +44850,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_A6PAG2">
+            <rdf:Description rdf:about="#R_6PGALSZ_1">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -39554,14 +44858,16 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gal_bD_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lac6p_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_dgal6p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glc_D_B_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU05840"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_AACLAM" sboTerm="SBO:0000176" id="R_AACLAM" name="Acetyl adenylate CoA ligase AMP-forming " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -39622,6 +44928,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AACPS2" sboTerm="SBO:0000176" id="R_AACPS2" name="Acyl-[acyl-carrier-protein] synthetase  (n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AACPS2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95141"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdcea_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AACPS3" sboTerm="SBO:0000176" id="R_AACPS3" name="Acyl-[acyl-carrier-protein] synthetase  (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39780,6 +45118,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AACPS8" sboTerm="SBO:0000176" id="R_AACPS8" name="Acyl-[acyl-carrier-protein] synthetase  (n-C10:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AACPS8">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95147"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dcaACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AACPS9" sboTerm="SBO:0000176" id="R_AACPS9" name="Acyl-[acyl-carrier-protein] synthetase  (n-C8:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39912,31 +45282,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU03900"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ABTt_1" sboTerm="SBO:0000185" id="R_ABTt_1" name="L arabinitol transport via passive diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ABTt_1">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05483"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_abt__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_abt__L_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ABUTD" sboTerm="SBO:0000176" id="R_ABUTD" name="Aminobutyraldehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40433,7 +45778,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU32830"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACALDtex" sboTerm="SBO:0000185" id="R_ACALDtex" name="Acetaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACALDt" sboTerm="SBO:0000185" id="R_ACALDt" name="Acetaldehyde reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -40441,7 +45786,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACALDtex">
+            <rdf:Description rdf:about="#R_ACALDt">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
@@ -40459,8 +45804,11 @@
           <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ACCOAC" sboTerm="SBO:0000176" id="R_ACCOAC" name="Acetyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -40562,6 +45910,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACGAMK" sboTerm="SBO:0000176" id="R_ACGAMK" name="N-acetylglucosamine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACGAMK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.59"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-ACETYLGLUCOSAMINE-KINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00892"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgam6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ACGApts" sboTerm="SBO:0000185" id="R_ACGApts" name="N-Acetyl-D-glucosamine transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40975,61 +46358,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACMUMptspp" sboTerm="SBO:0000185" id="R_ACMUMptspp" name="N-acetylmuramate transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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-        <listOfReactants>
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-          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_acmum6p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
-        </fbc:geneProductAssociation>
-      </reaction>
-      <reaction metaid="R_ACMUMtex" sboTerm="SBO:0000185" id="R_ACMUMtex" name="N-acetylmuramate transport via diffusion (extracellular to periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACMUMtex">
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-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_acmum_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_acmum_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ACNAMt2" sboTerm="SBO:0000185" id="R_ACNAMt2" name="N-acetylneuraminate proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41379,58 +46707,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACOAD6f" sboTerm="SBO:0000176" id="R_ACOAD6f" name="Acyl-CoA dehydrogenase (tetradecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACOAD6f">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.8.7"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.3"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28360"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28361"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/47316"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/47318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/47319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95300"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02803"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ACOAD7" sboTerm="SBO:0000176" id="R_ACOAD7" name="Acyl-CoA dehydrogenase (hexadecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41469,48 +46745,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACOAD7f" sboTerm="SBO:0000176" id="R_ACOAD7f" name="Acyl-CoA dehydrogenase (hexadecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACOAD7f">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.3.6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.8.7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.8.8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.8.9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.-"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/43448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/43449"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/43450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/43451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95301"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01279"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00946"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pmtcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_hdd2coa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ACOADH2" sboTerm="SBO:0000176" id="R_ACOADH2" name="Acyl CoA dehydrogenase  isobutyryl CoA " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41653,6 +46887,86 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15350"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACONCt4pp" sboTerm="SBO:0000185" id="R_ACONCt4pp" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ACONCt4pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU07600"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ACONCtex" sboTerm="SBO:0000185" id="R_ACONCtex" name="Cisaconitat transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACONCtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12788"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ACONCtupp" sboTerm="SBO:0000185" id="R_ACONCtupp" name="Cisaconitate transport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACONCtupp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12788"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU07600"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACONT" sboTerm="SBO:0000176" id="R_ACONT" name="Aconitate hydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41687,6 +47001,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU18000"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACONTb" sboTerm="SBO:0000176" id="R_ACONTb" name="Aconitase (half-reaction B, Isocitrate hydro-lyase)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACONTb">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01388"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ACOTA" sboTerm="SBO:0000176" id="R_ACOTA" name="Acetylornithine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41774,6 +47120,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU07880"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACPPAT120" sboTerm="SBO:0000176" id="R_ACPPAT120" name="Acyl-(acyl carrier protein):phosphate acyltransferase (C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACPPAT120">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95395"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ddcaACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddcap_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACPPAT140" sboTerm="SBO:0000176" id="R_ACPPAT140" name="Acyl-(acyl carrier protein):phosphate acyltransferase (C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41804,6 +47180,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACPPAT141" sboTerm="SBO:0000176" id="R_ACPPAT141" name="Acyl-(acyl carrier protein):phosphate acyltransferase (C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACPPAT141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95397"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdceap_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACPPAT160" sboTerm="SBO:0000176" id="R_ACPPAT160" name="Acyl-(acyl carrier protein):phosphate acyltransferase (C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42426,7 +47832,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU07640"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACt4pp" sboTerm="SBO:0000185" id="R_ACt4pp" name="Na+/Acetate symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACt2ipp" sboTerm="SBO:0000185" id="R_ACt2ipp" name="Acetate transport out via proton symport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -42434,23 +47840,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACt4pp">
+            <rdf:Description rdf:about="#R_ACt2ipp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95430"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08061"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ac_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ACtex" sboTerm="SBO:0000185" id="R_ACtex" name="Acetate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -43367,6 +48775,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU40420"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ADtr" sboTerm="SBO:0000185" id="R_ADtr" name="Acetamide transport, extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADtr">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10936"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ad_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGDC" sboTerm="SBO:0000176" id="R_AGDC" name="N-acetylglucosamine-6-phosphate deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43404,6 +48837,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU35010"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AGM3PA" sboTerm="SBO:0000176" id="R_AGM3PA" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGM3PA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08073"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhgm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGM3PApp" sboTerm="SBO:0000176" id="R_AGM3PApp" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43431,6 +48891,63 @@
           <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_AGM4PApp" sboTerm="SBO:0000176" id="R_AGM4PApp" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGM4PApp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08076"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_LalaDgluMdapDala_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_AGM4PCP" sboTerm="SBO:0000176" id="R_AGM4PCP" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGM4PCP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08077"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhgm3p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU12970"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AGM4PCPpp" sboTerm="SBO:0000176" id="R_AGM4PCPpp" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase (periplasmic)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43461,6 +48978,87 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU34800"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AGM4PH" sboTerm="SBO:0000176" id="R_AGM4PH" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide beta -1,4-N-acetylglucosaminidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGM4PH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08078"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhm4p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_AGM4Pt2pp" sboTerm="SBO:0000185" id="R_AGM4Pt2pp" name="GlcNAc-anhMurNAc tetrapeptide transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGM4Pt2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08079"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm4p_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_anhgm4p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_AGMH" sboTerm="SBO:0000176" id="R_AGMH" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl beta -1,4-N-acetylglucosaminidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGMH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08080"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGMT" sboTerm="SBO:0000176" id="R_AGMT" name="Agmatinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43540,6 +49138,33 @@
           <speciesReference species="M_pa120_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_AGPAT141" sboTerm="SBO:0000176" id="R_AGPAT141" name="1-tetradec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGPAT141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95560"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_1tdec7eg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGPAT160" sboTerm="SBO:0000176" id="R_AGPAT160" name="1-hexadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43567,6 +49192,33 @@
           <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_AGPAT161" sboTerm="SBO:0000176" id="R_AGPAT161" name="1-hexadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGPAT161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95564"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_1hdec9eg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGPAT180" sboTerm="SBO:0000176" id="R_AGPAT180" name="1-octadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43594,6 +49246,33 @@
           <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_AGPAT181" sboTerm="SBO:0000176" id="R_AGPAT181" name="1-octadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGPAT181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95567"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_1odec11eg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_octeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGPATr_BS" sboTerm="SBO:0000176" id="R_AGPATr_BS" name="1 acylglycerol 3 phosphate O acyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44690,23 +50369,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ALAtpp" sboTerm="SBO:0000185" id="R_ALAtpp" name="L-alanine export via facilited diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ALAtex" sboTerm="SBO:0000185" id="R_ALAtex" name="L-alanine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ALAtpp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ALAtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10921"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13221"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ala__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_ala__L_p" stoichiometry="1" constant="true"/>
@@ -44926,30 +50610,6 @@
           <speciesReference species="M_ppoh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_ALCDpp" sboTerm="SBO:0000176" id="R_ALCDpp" name="Alcohol dehydrogenase  forward rxn  ethanol   acetaldehyde " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ALCDpp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ALDD1" sboTerm="SBO:0000176" id="R_ALDD1" name="Aldehyde dehydrogenase  formaldehyde  NAD " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45587,7 +51247,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ALR3" sboTerm="SBO:0000176" id="R_ALR3" name="Aldose reductase (acetol)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ALR4x" sboTerm="SBO:0000176" id="R_ALR4x" name="Aldose reductase (acetol)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -45595,10 +51255,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ALR3">
+            <rdf:Description rdf:about="#R_ALR4x">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08122"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -45607,11 +51268,11 @@
         <listOfReactants>
           <speciesReference species="M_acetol_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_12ppd__S_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_12ppd__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ALTRH" sboTerm="SBO:0000176" id="R_ALTRH" name="Altronate hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -45650,6 +51311,92 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU12390"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AM3PA" sboTerm="SBO:0000176" id="R_AM3PA" name="Anhydrous-N-Acetylmuramyl-tripeptide amidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AM3PA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08123"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhm3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_LalaDgluMdap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_AM4PCP" sboTerm="SBO:0000176" id="R_AM4PCP" name="Anhydrous-N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AM4PCP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08125"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhm4p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_anhm3p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU12970"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_AMALT4" sboTerm="SBO:0000176" id="R_AMALT4" name="Amylomaltase (maltohexaose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMALT4">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTODEG-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08129"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malthx_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malthp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AMANAPEr" sboTerm="SBO:0000176" id="R_AMANAPEr" name="N-acetylmannosamine 6-phosphate epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45797,6 +51544,84 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AMID4" sboTerm="SBO:0000176" id="R_AMID4" name="Amidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMID4">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00231"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU13570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_AMMQLT8" sboTerm="SBO:0000176" id="R_AMMQLT8" name="S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMMQLT8">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADOMET-DMK-METHYLTRANSFER-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08130"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dmmql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU03160"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU04180"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU19600"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AMMQT8_2" sboTerm="SBO:0000176" id="R_AMMQT8_2" name="S-adenosylmethione:2-demethylmenaquinone methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46411,6 +52236,71 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AMPTASEPG" sboTerm="SBO:0000176" id="R_AMPTASEPG" name="Aminopeptidase (pro-gly)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMPTASEPG">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08133"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_progly_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU23910"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU32050"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ANDO1" sboTerm="SBO:0000176" id="R_ANDO1" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ANDO1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_anth_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ANHGMtex" sboTerm="SBO:0000185" id="R_ANHGMtex" name="GlcNAc-anhMurNAc transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46436,6 +52326,35 @@
           <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ANHMK" sboTerm="SBO:0000176" id="R_ANHMK" name="1,6-anhydrous-N-Acetylmuramate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ANHMK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acmum6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ANPRT" sboTerm="SBO:0000176" id="R_ANPRT" name="Anthranilate phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46593,7 +52512,56 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU14180"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_APG3PAT180" sboTerm="SBO:0000176" id="R_APG3PAT180" name="Acyl-phosphate:glycerol-3-phosphate acyltransferase (C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_APCt6" sboTerm="SBO:0000185" id="R_APCt6" name="Ampicilin  transport out via proton antiport TtgABC system  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_APCt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_APCtex" sboTerm="SBO:0000185" id="R_APCtex" name="Ampicilin transport  extracellular " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_APCtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_APH120" sboTerm="SBO:0000176" id="R_APH120" name="Acylphosphatase (C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -46601,22 +52569,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_APG3PAT180">
+            <rdf:Description rdf:about="#R_APH120">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95876"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdcap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddcap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_1odecg3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -46647,6 +52615,33 @@
           <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_APH141" sboTerm="SBO:0000176" id="R_APH141" name="Acylphosphatase (C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_APH141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95878"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdceap_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdcea_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_APH160" sboTerm="SBO:0000176" id="R_APH160" name="Acylphosphatase (C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46701,6 +52696,33 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_APH180" sboTerm="SBO:0000176" id="R_APH180" name="Acylphosphatase (C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_APH180">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95881"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocdcap_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_ocdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_APH181" sboTerm="SBO:0000176" id="R_APH181" name="Acylphosphatase (C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46866,32 +52888,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ARACHTA" sboTerm="SBO:0000176" id="R_ARACHTA" name="ARACHTA" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ARACHTA">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95920"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_arachcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_arachACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ARAI" sboTerm="SBO:0000176" id="R_ARAI" name="L-arabinose isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47383,6 +53379,74 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ARGabcpp" sboTerm="SBO:0000185" id="R_ARGabcpp" name="L-arginine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ARGabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29879#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29880#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29881#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29882#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-4-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11236"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU39490"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ARGt2pp" sboTerm="SBO:0000185" id="R_ARGt2pp" name="L lysine transport in via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ARGt2pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_arg__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU03110"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ARGt2r" sboTerm="SBO:0000185" id="R_ARGt2r" name="L arganine reversible transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47419,6 +53483,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ARGtex" sboTerm="SBO:0000185" id="R_ARGtex" name="L-arginine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ARGtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN66-448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10840"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_arg__L_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ARSR" sboTerm="SBO:0000176" id="R_ARSR" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47480,6 +53575,68 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU16750"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ASCBPL" sboTerm="SBO:0000176" id="R_ASCBPL" name="L-ascorbate 6-phosphate lactonase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASCBPL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07492"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3dhgulnp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ASCBpts" sboTerm="SBO:0000185" id="R_ASCBpts" name="L-ascorbate transport via PEP:Pyr PTS " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ASCBpts">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ASNN" sboTerm="SBO:0000176" id="R_ASNN" name="L-asparaginase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47742,6 +53899,87 @@
           <speciesReference species="M_asn__L_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ASO3tex_1" sboTerm="SBO:0000185" id="R_ASO3tex_1" name="Arsenite transport via diffusion (extracellular to cytoplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ASO3tex_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ASO4rt2rpp" sboTerm="SBO:0000185" id="R_ASO4rt2rpp" name="Arsenate reversible transport via symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASO4rt2rpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13759"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aso4_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_aso4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ASO4tex" sboTerm="SBO:0000185" id="R_ASO4tex" name="Arsenate transporter (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASO4tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05506"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_aso4_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ASP1DC" sboTerm="SBO:0000176" id="R_ASP1DC" name="Aspartate 1-decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47780,6 +54018,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU22410"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ASP3H" sboTerm="SBO:0000176" id="R_ASP3H" name="L Aspartate 3 hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ASP3H">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3hasp__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ASPCT" sboTerm="SBO:0000176" id="R_ASPCT" name="Aspartate carbamoyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48189,6 +54453,78 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU12250"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ASR" sboTerm="SBO:0000176" id="R_ASR" name="Arsenate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.20.4.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08171"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aso4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU24770"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU32810"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ASR2" sboTerm="SBO:0000176" id="R_ASR2" name="Arsenate reductase (thioredoxin)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASR2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.20.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.20.4.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.20.4.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R10927"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aso4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU25780"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ATPHs" sboTerm="SBO:0000176" id="R_ATPHs" name="ATP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48224,6 +54560,9 @@
           <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ATPPRT" sboTerm="SBO:0000176" id="R_ATPPRT" name="ATP phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -48386,6 +54725,38 @@
           <speciesReference species="M_ala_B_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_BCT1_syn" sboTerm="SBO:0000185" id="R_BCT1_syn" name="Bicarbonate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_BCT1_syn">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96227"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU30610"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_BDH" sboTerm="SBO:0000176" id="R_BDH" name="3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48779,33 +55150,6 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_BSCT" sboTerm="SBO:0000176" id="R_BSCT" name="Benzoylsuccinyl-CoA thiolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_BSCT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96324"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
-          <speciesReference species="M_sbzcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_benzcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_BTDD_RR" sboTerm="SBO:0000176" id="R_BTDD_RR" name=" R R  butanediol dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49143,7 +55487,7 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_BUTt4pp" sboTerm="SBO:0000185" id="R_BUTt4pp" name="Butyrate transport via sodium symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_BUTt2rpp" sboTerm="SBO:0000185" id="R_BUTt2rpp" name="Butyrate transport via proton symport, reversible (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -49151,10 +55495,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_BUTt4pp">
+            <rdf:Description rdf:about="#R_BUTt2rpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96353"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -49162,11 +55506,11 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_but_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_but_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_BUTtex" sboTerm="SBO:0000185" id="R_BUTtex" name="Butyrate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -49199,6 +55543,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_BZt" sboTerm="SBO:0000185" id="R_BZt" name="Benzoate transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_BZt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12436"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_bz_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_BZt1pp" sboTerm="SBO:0000185" id="R_BZt1pp" name="Benzoate transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49913,7 +56289,7 @@
           <speciesReference species="M_cd2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_CDAPPA181" sboTerm="SBO:0000176" id="R_CDAPPA181" name="CDP-Diacylglycerol pyrophostatase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CDAPPA140" sboTerm="SBO:0000176" id="R_CDAPPA140" name="CDP-Diacylglycerol pyrophostatase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -49921,25 +56297,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CDAPPA181">
+            <rdf:Description rdf:about="#R_CDAPPA140">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.26"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96507"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08200"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cdpdtdecg_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_CDGUNPD" sboTerm="SBO:0000176" id="R_CDGUNPD" name="3,5-cyclic-nucleotide phosphodiesterase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -50746,7 +57122,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CITt3" sboTerm="SBO:0000185" id="R_CITt3" name="Citrate transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CITt4pp_1" sboTerm="SBO:0000185" id="R_CITt4pp_1" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -50754,7 +57130,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_CITt3">
+            <rdf:Description rdf:about="#R_CITt4pp_1">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -50762,14 +57138,80 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU07600"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CITtex" sboTerm="SBO:0000185" id="R_CITtex" name="Citrate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CITtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10946"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
           <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_CITtupp" sboTerm="SBO:0000185" id="R_CITtupp" name="Citrate transport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CITtupp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10946"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU07600"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CLtex" sboTerm="SBO:0000185" id="R_CLtex" name="Chloride (Cl-1) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -50989,6 +57431,99 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_CMCMSAD" sboTerm="SBO:0000176" id="R_CMCMSAD" name="4 carboxy 2 hydroxymuconate 6 semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMCMSAD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHMS-DEHYDROGENASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03055"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cmhmsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cmhm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMHMI" sboTerm="SBO:0000176" id="R_CMHMI" name="5 carboxymethyl 2 hydroxymuconate delta isomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_CMHMI">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR142618"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03040"/>
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+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cmhm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cohe_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMLDC" sboTerm="SBO:0000176" id="R_CMLDC" name="4 carboxymuconolactone decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMLDC">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02483"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4cml_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CMPDAi" sboTerm="SBO:0000176" id="R_CMPDAi" name="CMP deaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51021,7 +57556,56 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU25580"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CMt2ex" sboTerm="SBO:0000185" id="R_CMt2ex" name="Chloramphenicol extrusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMt2ex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CMt2ppi" sboTerm="SBO:0000185" id="R_CMt2ppi" name="Chloramphenicol transport via diffusion  periplasm to cytosol " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMt2ppi">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMtex" sboTerm="SBO:0000185" id="R_CMtex" name="Chloramphenicol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -51029,7 +57613,180 @@
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-            <rdf:Description rdf:about="#R_CO2tex">
+            <rdf:Description rdf:about="#R_CMtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMtpp" sboTerm="SBO:0000185" id="R_CMtpp" name="Chloramphenicol transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96809"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CO23OC" sboTerm="SBO:0000176" id="R_CO23OC" name="Catechol oxygen 2 3-oxidoreductasedecyclizing " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CO23OC">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hmcnsad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU08240"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CO2t" sboTerm="SBO:0000185" id="R_CO2t" name="CO2 transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237069"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
@@ -51111,6 +57868,7 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
             <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -51200,6 +57958,9 @@
         <listOfProducts>
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_COBALT2abcpp" sboTerm="SBO:0000185" id="R_COBALT2abcpp" name="Cobalt (Co+2) ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -51420,7 +58181,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_COt" sboTerm="SBO:0000185" id="R_COt" name="CO transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_COt_1" sboTerm="SBO:0000185" id="R_COt_1" name="Co transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -51428,7 +58189,7 @@
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-            <rdf:Description rdf:about="#R_COt">
+            <rdf:Description rdf:about="#R_COt_1">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
@@ -51440,11 +58201,14 @@
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         </annotation>
         <listOfReactants>
-          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_CPPPGO" sboTerm="SBO:0000176" id="R_CPPPGO" name="Coproporphyrinogen oxidase (O2 required)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -51489,6 +58253,278 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CRNCBCT" sboTerm="SBO:0000176" id="R_CRNCBCT" name="Crotonobetainyl-CoA: carnitine CoA transferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNCBCT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.3.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R10643"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ctbtcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_crncoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ctbt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CRNCDH" sboTerm="SBO:0000176" id="R_CRNCDH" name="Carnityl-CoA dehydratse" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNCDH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28341"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNDETRU-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R10675"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_crncoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctbtcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU17170"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CRNDH" sboTerm="SBO:0000176" id="R_CRNDH" name="Carnitine 3 dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CRNDH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dhcrn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CRNDabcpp" sboTerm="SBO:0000185" id="R_CRNDabcpp" name="D-carnitine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNDabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08259"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn__D_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15340"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CRNabc" sboTerm="SBO:0000185" id="R_CRNabc" name="L-carnitine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38719#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38720#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38721#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38722#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08253"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU12250"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33800"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33810"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33820"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33830"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CRNabcpp" sboTerm="SBO:0000185" id="R_CRNabcpp" name="L-carnitine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38719#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38720#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38721#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/38722#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08253"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU15340"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CRNt8pp" sboTerm="SBO:0000185" id="R_CRNt8pp" name="L-carnitine/D-carnitine antiporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNt8pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96909"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08264"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_crn__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_crn__D_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_crn_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CRNtex" sboTerm="SBO:0000185" id="R_CRNtex" name="L-carnitine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09858"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_crn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_crn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CRO4abcpp" sboTerm="SBO:0000185" id="R_CRO4abcpp" name="Chromate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51688,6 +58724,46 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU38710"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CTBTabc" sboTerm="SBO:0000185" id="R_CTBTabc" name="Crotonobetaine transport in via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CTBTabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96938"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ctbt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ctbt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU09890"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33800"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33810"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33820"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU33830"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CTECOAI6" sboTerm="SBO:0000176" id="R_CTECOAI6" name="3-cis-2-trans-enoyl-CoA isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51897,6 +58973,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU37150"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CU1Opp" sboTerm="SBO:0000176" id="R_CU1Opp" name="Cuprous Oxidase (Cu+1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CU1Opp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.16.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30083"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96948"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cu_p" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cu2_p" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU06300"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CU2tex" sboTerm="SBO:0000185" id="R_CU2tex" name="Copper (Cu+2) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51985,6 +59096,126 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU07420"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CUtex" sboTerm="SBO:0000185" id="R_CUtex" name="Copper (Cu+1) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CUtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96954"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cu_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYANST" sboTerm="SBO:0000176" id="R_CYANST" name="Cyanide sulfurtransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CYANST">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16884"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THIOSULFATE-SULFURTRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01416"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU24540"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYANt2pp" sboTerm="SBO:0000185" id="R_CYANt2pp" name="Cyanate transport via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CYANt2pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU40480"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYANtex" sboTerm="SBO:0000185" id="R_CYANtex" name="Cyanide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CYANtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08276"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CYSDS" sboTerm="SBO:0000176" id="R_CYSDS" name="Cysteine Desulfhydrase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52793,6 +60024,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU05950"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_Cotpp" sboTerm="SBO:0000185" id="R_Cotpp" name="Co transport via diffusion (periplasm to cytosol)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_Cotpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_Cut1" sboTerm="SBO:0000185" id="R_Cut1" name="Copper export via ATPase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52922,6 +60182,32 @@
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_DAAD8" sboTerm="SBO:0000176" id="R_DAAD8" name="D Amino acid dehydrogenase  ser D " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DAAD8">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__D_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DAAOP" sboTerm="SBO:0000176" id="R_DAAOP" name="D alanyl aminopeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53129,6 +60415,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU38710"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAGK" sboTerm="SBO:0000176" id="R_DAGK" name="Diacylglycerol kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DAGK">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dag_MRSA_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptdoh_MRSA_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU06720"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DAGK120" sboTerm="SBO:0000176" id="R_DAGK120" name="Diacylglycerol kinase (n-C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53159,6 +60473,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU29940"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAGK140" sboTerm="SBO:0000176" id="R_DAGK140" name="Diacylglycerol kinase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DAGK140">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97092"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr140_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU29940"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DAGK141" sboTerm="SBO:0000176" id="R_DAGK141" name="Diacylglycerol kinase (n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53220,6 +60564,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU29940"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAGK161" sboTerm="SBO:0000176" id="R_DAGK161" name="Diacylglycerol kinase (n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DAGK161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97097"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr161_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU29940"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DAGK180" sboTerm="SBO:0000176" id="R_DAGK180" name="Diacylglycerol kinase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53429,6 +60803,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAPDA" sboTerm="SBO:0000176" id="R_DAPDA" name="N-acetyl-L,L-diaminopimelate deacetylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DAPDA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.47"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01972"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n6all26d_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_26dap_LL_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU10070"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DAPDC" sboTerm="SBO:0000176" id="R_DAPDC" name="Diaminopimelate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53617,6 +61028,67 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU29250"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DASYN140" sboTerm="SBO:0000176" id="R_DASYN140" name="CDP-diacylglycerol synthetase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DASYN140">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08307"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cdpdtdecg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU29250"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DASYN141" sboTerm="SBO:0000176" id="R_DASYN141" name="CDP-diacylglycerol synthetase (n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DASYN141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08308"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa141_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cdpdtdec7eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DASYN160" sboTerm="SBO:0000176" id="R_DASYN160" name="CDP-diacylglycerol synthetase (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53649,6 +61121,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU29250"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DASYN161" sboTerm="SBO:0000176" id="R_DASYN161" name="CDP-diacylglycerol synthetase (n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DASYN161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08310"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cdpdhdec9eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU29250"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DASYN180" sboTerm="SBO:0000176" id="R_DASYN180" name="CDP-diacylglycerol synthetase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53740,6 +61244,9 @@
           <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DB4PS" sboTerm="SBO:0000176" id="R_DB4PS" name="3,4-Dihydroxy-2-butanone-4-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -54523,6 +62030,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU31980"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHBSH_1" sboTerm="SBO:0000176" id="R_DHBSH_1" name="2 3 dihydroxybenzoylserine hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHBSH_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08328"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_23dhbzs_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHDPRy" sboTerm="SBO:0000176" id="R_DHDPRy" name="Dihydrodipicolinate reductase (NADPH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54590,6 +62124,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU16770"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHEDAA" sboTerm="SBO:0000176" id="R_DHEDAA" name="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHEDAA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.52"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01203"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_24dhhed_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sucsal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHFR" sboTerm="SBO:0000176" id="R_DHFR" name="Dihydrofolate reductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54689,6 +62253,34 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHGLYH" sboTerm="SBO:0000176" id="R_DHGLYH" name="Dehydroglycine Hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DHGLYH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhgly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHNAOT_1" sboTerm="SBO:0000176" id="R_DHNAOT_1" name="1 4 dihydroxy 2 naphthoate octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54838,6 +62430,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15500"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHPDO" sboTerm="SBO:0000176" id="R_DHPDO" name="3 4 dihydroxyphenylacetate 2 3 dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPDO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.13.11.15-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02366"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_34dhpha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cmhmsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHPM1" sboTerm="SBO:0000176" id="R_DHPM1" name="Dihydropyrimidinase (5,6-dihydrouracil)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54993,6 +62619,42 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHSKDH" sboTerm="SBO:0000176" id="R_DHSKDH" name="Dehydroshikimate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHSKDH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DHSHIKIMATE-DEHYDRO-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01188"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU39680"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DINSK" sboTerm="SBO:0000176" id="R_DINSK" name="Deoxyinosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55462,31 +63124,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU34680"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DKGLCNR3" sboTerm="SBO:0000176" id="R_DKGLCNR3" name="2 5 diketo D gluconate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_DKGLCNR3">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_25dkglcn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_DKMD2K" sboTerm="SBO:0000176" id="R_DKMD2K" name="1 2 dihydroxy 3 keto 5 methylthiopentene dioxygenase  2 keto 4 methylthiobutyrate " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55712,6 +63349,30 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DNTAep" sboTerm="SBO:0000185" id="R_DNTAep" name="N N bis 3 5 dinitrotolyl  amine extrusion pump" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DNTAep">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_35dnta_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DNTPPA" sboTerm="SBO:0000176" id="R_DNTPPA" name="Dihydroneopterin triphosphate pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55949,6 +63610,28 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DRIBtex_1" sboTerm="SBO:0000185" id="R_DRIBtex_1" name="5-Deoxy-D-ribose transport by diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DRIBtex_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_5drib_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5drib_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DRPA" sboTerm="SBO:0000176" id="R_DRPA" name="Deoxyribose-phosphate aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56174,7 +63857,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU00280"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DURAD" sboTerm="SBO:0000176" id="R_DURAD" name="Dihydrouracil dehydrogenase (NADP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DURADx" sboTerm="SBO:0000176" id="R_DURADx" name="Dihydrouracil dehydrogenase (NAD)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -56182,34 +63865,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DURAD">
+            <rdf:Description rdf:about="#R_DURADx">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.3.1.2-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-73585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00978"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00719"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -56217,11 +63884,11 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_56dura_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -56439,6 +64106,61 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU24270"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DXYLUDtex" sboTerm="SBO:0000185" id="R_DXYLUDtex" name="1-deoxy-d-xyluose transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DXYLUDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28446"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28447"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97833"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dxyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dxyl_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_DXYLUDtpp" sboTerm="SBO:0000185" id="R_DXYLUDtpp" name="1-deoxy-d-xyluose transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DXYLUDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97834"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dxyl_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dxyl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ECOAH1" sboTerm="SBO:0000176" id="R_ECOAH1" name="3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -57389,6 +65111,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETOHtrpp" sboTerm="SBO:0000185" id="R_ETOHtrpp" name="Ethanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09764"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_F1PP" sboTerm="SBO:0000176" id="R_F1PP" name="D-fructose 1-phosphate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -57452,6 +65209,34 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FA100ACPHi" sboTerm="SBO:0000176" id="R_FA100ACPHi" name="Fatty-acyl-ACP hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FA100ACPHi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99086"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dcaACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FA80ACPHi" sboTerm="SBO:0000176" id="R_FA80ACPHi" name="Fatty-acyl-ACP hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -57682,6 +65467,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FACOAL140t2pp" sboTerm="SBO:0000185" id="R_FACOAL140t2pp" name="Fatty-acid-CoA ligase (tetradecanoate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FACOAL140t2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99147"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FACOAL141t2pp" sboTerm="SBO:0000185" id="R_FACOAL141t2pp" name="Fatty-acid-CoA ligase (tetradecenoate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58115,35 +65930,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FACOAL200" sboTerm="SBO:0000176" id="R_FACOAL200" name="Fatty-acid--CoA ligase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FACOAL200">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99181"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10706"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_arach_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_arachcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_FACOAL50It2pp" sboTerm="SBO:0000185" id="R_FACOAL50It2pp" name="Fatty-acid--CoA ligase (isovalerate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58333,7 +66119,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU40250"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FALDtex" sboTerm="SBO:0000185" id="R_FALDtex" name="Formaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FALDtpp" sboTerm="SBO:0000185" id="R_FALDtpp" name="Formaldehyde transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -58341,7 +66127,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FALDtex">
+            <rdf:Description rdf:about="#R_FALDtpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99238"/>
@@ -58353,11 +66139,14 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FALDtpp2" sboTerm="SBO:0000185" id="R_FALDtpp2" name="Formaldehyde extrusion  pp " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -58389,166 +66178,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FAS200" sboTerm="SBO:0000176" id="R_FAS200" name="FAS200" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FAS200">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99409"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10647"/>
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-              </bqbiol:is>
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-          </rdf:RDF>
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-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_ocdca_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_arach_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_FASm220" sboTerm="SBO:0000176" id="R_FASm220" name="FASm220" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FASm220">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99434"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10705"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
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-        <listOfReactants>
-          <speciesReference species="M_arach_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_mmcoa__S_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mbhn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_FASm240" sboTerm="SBO:0000176" id="R_FASm240" name="FASm240" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FASm240">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99437"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10725"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_mbhn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mmcoa__S_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_dmlgnc_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_FASm260" sboTerm="SBO:0000176" id="R_FASm260" name="FASm260" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FASm260">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10715"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_dmlgnc_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_mmcoa__S_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_tmhexc_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_FASm280" sboTerm="SBO:0000176" id="R_FASm280" name="FASm280" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FASm280">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99443"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10738"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_mmcoa__S_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_tmhexc_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_tamocta_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_FBA" sboTerm="SBO:0000176" id="R_FBA" name="Fructose-bisphosphate aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58625,6 +66254,69 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FBACS" sboTerm="SBO:0000176" id="R_FBACS" name="Ferribactin synthase  P putida specific " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FBACS">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_24dab_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3hasp__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n5horn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fbac_kt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="6" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU03480"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU03510"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FBACabcpp" sboTerm="SBO:0000185" id="R_FBACabcpp" name="Ferribactin  ABC system  cytoplasm to periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FBACabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fbac_kt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fbac_kt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FBP" sboTerm="SBO:0000176" id="R_FBP" name="Fructose-bisphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -59314,7 +67006,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FE3Gabcpp" sboTerm="SBO:0000185" id="R_FE3Gabcpp" name="Iron (III) transport via ABC system (GTP) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FE3DCITabcpp" sboTerm="SBO:0000185" id="R_FE3DCITabcpp" name="Iron transport from ferric-dicitrate via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -59322,55 +67014,92 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FE3Gabcpp">
+            <rdf:Description rdf:about="#R_FE3DCITabcpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99513"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08478"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_fe3_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3dcit_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU22840"/>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU05610"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FE3PYOVD2tonex" sboTerm="SBO:0000185" id="R_FE3PYOVD2tonex" name="Ferrypioverdine  Pputida specific  Ton dependent transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FE3DCITtonex" sboTerm="SBO:0000185" id="R_FE3DCITtonex" name="Ferric-dicitrate transport via ton system (extracellular)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_FE3PYOVD2tonex">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FE3DCITtonex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08479"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_fe3pyovd_kt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3dcit_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_FE3PYOVDDR2" sboTerm="SBO:0000176" id="R_FE3PYOVDDR2" name="Ferrypyoverdine  dissociation reduction  Pputida specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FE3Gabcpp" sboTerm="SBO:0000185" id="R_FE3Gabcpp" name="Iron (III) transport via ABC system (GTP) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FE3Gabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99513"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU22840"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine complex formation  P putida KT2440 specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -59378,7 +67107,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_FE3PYOVDDR2">
+            <rdf:Description rdf:about="#R_FE3PYOVDL2">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -59386,15 +67115,15 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_fe3pyovd_kt_p" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_pqqh2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_fe2_p" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_pqq_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyovd_kt_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FE3abc" sboTerm="SBO:0000185" id="R_FE3abc" name="Iron (III) transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -59609,6 +67338,48 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30650"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FEROpp" sboTerm="SBO:0000176" id="R_FEROpp" name="Ferroxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEROpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.16.3.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00056"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe2_p" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3_p" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU06300"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FFSD" sboTerm="SBO:0000176" id="R_FFSD" name="Beta-fructofuranosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60005,6 +67776,42 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU21810"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FOMETRi" sboTerm="SBO:0000176" id="R_FOMETRi" name="Aminomethyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FOMETRi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.10"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34768"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34770"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99614"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01652"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5fthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU24890"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FORAMD" sboTerm="SBO:0000176" id="R_FORAMD" name="FORAMD" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60338,6 +68145,144 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FRUpts2pp" sboTerm="SBO:0000185" id="R_FRUpts2pp" name="Fructose transport via PEP:Pyr PTS (f6p generating) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FRUpts2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99662"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fru_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FRUptspp" sboTerm="SBO:0000185" id="R_FRUptspp" name="D-fructose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FRUptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08536"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fru_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_f1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FRUtex" sboTerm="SBO:0000185" id="R_FRUtex" name="D-fructose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FRUtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-189222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12996"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fru_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fru_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FTHFCL" sboTerm="SBO:0000176" id="R_FTHFCL" name="5 formethyltetrahydrofolate cyclo ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FTHFCL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.3.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01653"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5fthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU24890"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FTHFD" sboTerm="SBO:0000176" id="R_FTHFD" name="Formyltetrahydrofolate deformylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60618,6 +68563,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_G3PAT141" sboTerm="SBO:0000176" id="R_G3PAT141" name="Glycerol-3-phosphate acyltransferase (C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PAT141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99856"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_1tdec7eg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_G3PAT160" sboTerm="SBO:0000176" id="R_G3PAT160" name="Glycerol-3-phosphate acyltransferase (C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60648,6 +68623,96 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_G3PAT161" sboTerm="SBO:0000176" id="R_G3PAT161" name="Glycerol-3-phosphate acyltransferase (C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PAT161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99859"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_1hdec9eg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_G3PAT180" sboTerm="SBO:0000176" id="R_G3PAT180" name="Glycerol-3-phosphate acyltransferase (C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PAT180">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99860"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocdcaACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_1odecg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_G3PAT181" sboTerm="SBO:0000176" id="R_G3PAT181" name="Glycerol-3-phosphate acyltransferase (C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PAT181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99862"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_octeACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_1odec11eg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU15920"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_G3PCT" sboTerm="SBO:0000176" id="R_G3PCT" name="Glycerol-3-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60686,6 +68751,66 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU35740"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_G3PCabcpp" sboTerm="SBO:0000185" id="R_G3PCabcpp" name="Sn-glycerol-3-phosphocholine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PCabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08553"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_G3PCtex" sboTerm="SBO:0000185" id="R_G3PCtex" name="Glycero-3-phosphocholine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PCtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13291"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3pc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3pc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_G3PD1ir" sboTerm="SBO:0000176" id="R_G3PD1ir" name="Glycerol 3 phosphate dehydrogenase  NAD " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60877,6 +69002,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_G5SD" sboTerm="SBO:0000176" id="R_G5SD" name="Glutamate-5-semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -61167,6 +69295,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU38200"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GALM2" sboTerm="SBO:0000176" id="R_GALM2" name="Aldose 1-epimerase (galactose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GALM2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28678"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALDOSE1EPIM-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08582"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gal_bD_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GALS3" sboTerm="SBO:0000176" id="R_GALS3" name="A-galactosidase (melibiose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -62760,6 +70919,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU10520"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLCtex" sboTerm="SBO:0000185" id="R_GLCtex" name="Glucose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLCtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09679"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09875"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glc__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glc__D_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GLGC" sboTerm="SBO:0000176" id="R_GLGC" name="Glucose-1-phosphate adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -63073,39 +71260,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLUABUTt7" sboTerm="SBO:0000185" id="R_GLUABUTt7" name="4-aminobutyrate/glutamate antiport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GLUABUTt7">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28920"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28921"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28922"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100276"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08628"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10136"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLUDxi" sboTerm="SBO:0000176" id="R_GLUDxi" name="Glutamate dehydrogenase  NAD " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -63912,6 +72066,55 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU17000"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYBACT1r" sboTerm="SBO:0000176" id="R_GLYBACT1r" name="Glycine betaine CoA C acetyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GLYBACT1r">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_GLYBCOAT" sboTerm="SBO:0000176" id="R_GLYBCOAT" name="Glycine betaine CoA thioesterase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GLYBCOAT">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_glybcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glyb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GLYBabc" sboTerm="SBO:0000185" id="R_GLYBabc" name="Glycine betaine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64680,6 +72883,97 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYCtpp" sboTerm="SBO:0000185" id="R_GLYCtpp" name="Glycerol transport via channel (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLYCtpp">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29678"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-432049"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-432049"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-507871"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08658"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLYGLNtr" sboTerm="SBO:0000185" id="R_GLYGLNtr" name="Dipeptide transport via ABC system gly-gln " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -65270,23 +73564,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU19340"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLYtpp" sboTerm="SBO:0000185" id="R_GLYtpp" name="Glycine transport via facillitated diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GLYtex" sboTerm="SBO:0000185" id="R_GLYtex" name="Glycine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_GLYtpp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLYtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-351963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13111"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_gly_p" stoichiometry="1" constant="true"/>
@@ -65433,41 +73743,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GNK" sboTerm="SBO:0000176" id="R_GNK" name="Gluconokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GNK">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19434"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19435"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19436"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.12"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUCONOKIN-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100390"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01737"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01275"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glcn_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GNK_1" sboTerm="SBO:0000176" id="R_GNK_1" name="Gluconokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -65531,7 +73806,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU40060"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GOR1" sboTerm="SBO:0000176" id="R_GOR1" name="Glycine oxidoreductase (NADH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GOX" sboTerm="SBO:0000176" id="R_GOX" name="Glycine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -65539,7 +73814,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_GOR1">
+            <rdf:Description rdf:about="#R_GOX">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -65547,45 +73822,64 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
           <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU11690"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GOX" sboTerm="SBO:0000176" id="R_GOX" name="Glycine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GPDDA1" sboTerm="SBO:0000176" id="R_GPDDA1" name="Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_GOX">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_GPDDA1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.4.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.4.46"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.1.4.2-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1483116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-6814132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1483112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-6814137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00758"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU11690"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU02130"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU24180"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_GPDDA1_1" sboTerm="SBO:0000176" id="R_GPDDA1_1" name="Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -66395,6 +74689,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GTPHs" sboTerm="SBO:0000176" id="R_GTPHs" name="GTP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GTPHs">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08679"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GUACYC" sboTerm="SBO:0000176" id="R_GUACYC" name="Guanylate cyclase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66715,6 +75040,153 @@
           <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_H2Ot" sboTerm="SBO:0000185" id="R_H2Ot" name="H2O transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_H2Otex" sboTerm="SBO:0000185" id="R_H2Otex" name="H2O transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66862,9 +75334,218 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
             <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_H2Otpp" sboTerm="SBO:0000185" id="R_H2Otpp" name="H2O transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2Otpp">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2SO" sboTerm="SBO:0000176" id="R_H2SO" name="Hydrogen sulfide oxidation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2SO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08688"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2St1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_H2tex" sboTerm="SBO:0000185" id="R_H2tex" name="Hydrogen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67335,6 +76016,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU32840"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HBCH" sboTerm="SBO:0000176" id="R_HBCH" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HBCH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctncoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU09880"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HBCHLR" sboTerm="SBO:0000176" id="R_HBCHLR" name="(3R)-3-Hydroxybutanoyl-CoA hydro-lyase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67563,9 +76271,54 @@
           <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU30690"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU30690"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HCO3tex" sboTerm="SBO:0000185" id="R_HCO3tex" name="Bicarbonate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HCO3tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13310"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hco3_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HCYSMT" sboTerm="SBO:0000176" id="R_HCYSMT" name="Homocysteine S-methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67821,6 +76574,123 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HG2t3pp" sboTerm="SBO:0000185" id="R_HG2t3pp" name="Mercury (Hg+2) transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HG2t3pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08716"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_HG2tex" sboTerm="SBO:0000185" id="R_HG2tex" name="Mercury (Hg+2) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HG2tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08717"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_HGt" sboTerm="SBO:0000185" id="R_HGt" name="Mercury transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HGt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08717"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU33510"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_HHDDI" sboTerm="SBO:0000176" id="R_HHDDI" name="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HHDDI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143163"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2hh24dd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2ohed_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU10750"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HIBD" sboTerm="SBO:0000176" id="R_HIBD" name="3 hydroxyisobutyrate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -68367,26 +77237,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HMR_9638" sboTerm="SBO:0000185" id="R_HMR_9638" name="HMR 9638" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HMSH" sboTerm="SBO:0000176" id="R_HMSH" name="2 hydroxymuconic semi aldehyde" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_HMR_9638">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HMSH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14552"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.7.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.7.1.9-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR125782"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_4abutn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2hmcnsad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4abutn_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_for_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_op4en_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_HOMt2pp" sboTerm="SBO:0000185" id="R_HOMt2pp" name="L-homoserineserine efflux via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -68449,6 +77330,36 @@
           <speciesReference species="M_hom__L_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_HOPNTAL" sboTerm="SBO:0000176" id="R_HOPNTAL" name="4-hydroxy-2-oxopentanoate aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HOPNTAL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.n4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.39"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100679"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00540"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4h2opntn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HOXPRx" sboTerm="SBO:0000176" id="R_HOXPRx" name="2 hydroxy 3 oxopropionate reductase  NAD " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -68488,6 +77399,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU13960"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HPA3MO" sboTerm="SBO:0000176" id="R_HPA3MO" name="4 hydroxyphenylacetate 3 monooxygenase nadh" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HPA3MO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.14.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95019"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hphac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhpha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU18620"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HPPK" sboTerm="SBO:0000176" id="R_HPPK" name="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -68966,6 +77910,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU28770"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HYXNtex" sboTerm="SBO:0000185" id="R_HYXNtex" name="Hypoxanthine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HYXNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08738"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10143"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hxan_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hxan_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_Htex" sboTerm="SBO:0000185" id="R_Htex" name="Proton transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69045,38 +78024,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_IBTMr" sboTerm="SBO:0000176" id="R_IBTMr" name="Isobutyryl-CoA mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_IBTMr">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13141"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13144"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.99.13"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ISOBUTYRYL-COA-MUTASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100777"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01181"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00877"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ibcoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ICDHyr" sboTerm="SBO:0000176" id="R_ICDHyr" name="Isocitrate dehydrogenase (NADP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69256,6 +78203,86 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU07610"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ICITt4pp" sboTerm="SBO:0000185" id="R_ICITt4pp" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ICITt4pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU07600"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ICITtex" sboTerm="SBO:0000185" id="R_ICITtex" name="Citrate transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ICITtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12803"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ICITtupp" sboTerm="SBO:0000185" id="R_ICITtupp" name="Isocitrate transport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ICITtupp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12803"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU07600"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_IDOND" sboTerm="SBO:0000176" id="R_IDOND" name="L-idonate 5-dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69564,6 +78591,39 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ILEtex" sboTerm="SBO:0000185" id="R_ILEtex" name="L-isoleucine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ILEtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100824"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13323"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ile__L_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_IMPC" sboTerm="SBO:0000176" id="R_IMPC" name="IMP cyclohydrolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69705,6 +78765,59 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_INDOLEt6" sboTerm="SBO:0000185" id="R_INDOLEt6" name="Indole transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_INDOLEt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_INDOLEtex" sboTerm="SBO:0000185" id="R_INDOLEtex" name="Indole transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_INDOLEtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08751"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_indole_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_INOSR" sboTerm="SBO:0000176" id="R_INOSR" name="Ketoinositol reductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -71021,6 +80134,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_KG6PDC" sboTerm="SBO:0000176" id="R_KG6PDC" name="3-keto-L-gulonate 6-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_KG6PDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.85"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04928"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3dhgulnp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xu5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_Kt1" sboTerm="SBO:0000185" id="R_Kt1" name="Potassium transport via uniport (facilitated diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72130,6 +81277,41 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_LDH_D" sboTerm="SBO:0000176" id="R_LDH_D" name="D-lactate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LDH_D">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.28"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DLACTDEHYDROGNAD-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00500"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LDH_L" sboTerm="SBO:0000176" id="R_LDH_L" name="L-lactate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72704,6 +81886,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU24080"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_LPLIPAL2E141" sboTerm="SBO:0000176" id="R_LPLIPAL2E141" name="Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LPLIPAL2E141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101185"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2agpe141_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3pe_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdcea_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LPLIPAL2E160" sboTerm="SBO:0000176" id="R_LPLIPAL2E160" name="Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72736,6 +81945,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30510"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_LPLIPAL2E161" sboTerm="SBO:0000176" id="R_LPLIPAL2E161" name="Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LPLIPAL2E161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101187"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2agpe161_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3pe_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdcea_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LPLIPAL2E180" sboTerm="SBO:0000176" id="R_LPLIPAL2E180" name="Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72768,6 +82004,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30510"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_LPLIPAL2E181" sboTerm="SBO:0000176" id="R_LPLIPAL2E181" name="Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LPLIPAL2E181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101189"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2agpe181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3pe_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocdcea_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LPLIPAL2G120" sboTerm="SBO:0000176" id="R_LPLIPAL2G120" name="Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -73261,38 +82524,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_LacR" sboTerm="SBO:0000176" id="R_LacR" name="Lactate racemase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_LacR">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10960"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10961"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10962"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.2.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LACTATE-RACEMASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101281"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01057"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_M1PD" sboTerm="SBO:0000176" id="R_M1PD" name="Mannitol-1-phosphate 5-dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -73698,6 +82929,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MALTptspp" sboTerm="SBO:0000185" id="R_MALTptspp" name="Maltose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALTptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08872"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_malt6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MALTt2" sboTerm="SBO:0000185" id="R_MALTt2" name="Maltose transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -73729,6 +82991,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU32590"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MALTtexi" sboTerm="SBO:0000185" id="R_MALTtexi" name="MaltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALTtexi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_malt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MAL_D_Et" sboTerm="SBO:0000185" id="R_MAL_D_Et" name="D-Malate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -73982,6 +83276,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MANptspp" sboTerm="SBO:0000185" id="R_MANptspp" name="D-mannose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08885"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_man_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MANt2" sboTerm="SBO:0000185" id="R_MANt2" name="D mannose transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74015,6 +83340,87 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MANtex" sboTerm="SBO:0000185" id="R_MANtex" name="D-mannose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12997"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_man_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_man_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_MBCOAi" sboTerm="SBO:0000176" id="R_MBCOAi" name="3-Methylbutanoyl-CoA:(acceptor) 2,3-oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MBCOAi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.8.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.8.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.10"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02866"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ivcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3mb2coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MCA" sboTerm="SBO:0000176" id="R_MCA" name="Methyl cis aconitase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74085,6 +83491,72 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU03520"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MCCC" sboTerm="SBO:0000176" id="R_MCCC" name="Methylcrotonoyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MCCC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.4.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:METHYLCROTONYL-COA-CARBOXYLASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101411"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-508308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02889"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3mb2coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3mgcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU18240"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MCITL2" sboTerm="SBO:0000176" id="R_MCITL2" name="Methylisocitrate lyase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74198,6 +83670,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU00180"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MCTC_1" sboTerm="SBO:0000176" id="R_MCTC_1" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MCTC_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3mb2coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3mgcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU38950"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MCTP1App" sboTerm="SBO:0000176" id="R_MCTP1App" name="Murein crosslinking transpeptidase 1A:(A2pm-&gt;D-ala) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74682,6 +84184,30 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU29120"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MDNTHAep" sboTerm="SBO:0000185" id="R_MDNTHAep" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline extrusion pump" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MDNTHAep">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2m35mdntha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MDRPD" sboTerm="SBO:0000176" id="R_MDRPD" name="5-Methylthio-5-deoxy-D-ribulose 1-phosphate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74964,6 +84490,7 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
             <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -74996,6 +84523,9 @@
         <listOfProducts>
           <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MEPCT" sboTerm="SBO:0000176" id="R_MEPCT" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -75863,6 +85393,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MGCH" sboTerm="SBO:0000176" id="R_MGCH" name="Methylglutaconyl-CoA hydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MGCH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101513"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3mgcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hmgcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MGSA" sboTerm="SBO:0000176" id="R_MGSA" name="Methylglyoxal synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75896,7 +85452,10 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU22480"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU22480"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MGt5" sboTerm="SBO:0000185" id="R_MGt5" name="Magnesium transport in/out via permease (no H+)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -76637,7 +86196,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MLTP3" sboTerm="SBO:0000176" id="R_MLTP3" name="Maltodextrin phosphorylase (maltoheptaose)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MMCD" sboTerm="SBO:0000176" id="R_MMCD" name="Methylmalonyl-CoA decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -76645,25 +86204,31 @@
         </notes>
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-            <rdf:Description rdf:about="#R_MLTP3">
+            <rdf:Description rdf:about="#R_MMCD">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14286"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08943"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:METHYLMALONYL-COA-DECARBOXYLASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00672"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_malthp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mmcoa__S_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_malthx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_MMSAD1" sboTerm="SBO:0000176" id="R_MMSAD1" name="Methylmalonate semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -77563,6 +87128,30 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MTAM_1" sboTerm="SBO:0000176" id="R_MTAM_1" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MTAM_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_5fthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_methf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MTAN" sboTerm="SBO:0000176" id="R_MTAN" name="Methylthioadenosine nucleosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77829,7 +87418,93 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU13560"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NACt" sboTerm="SBO:0000185" id="R_NACt" name="Nicotinic acid transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MUCCY_kt" sboTerm="SBO:0000176" id="R_MUCCY_kt" name="3 carboxy cis cis muconate cycloisomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MUCCY_kt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.5.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02369"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_CCbuttc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4cml_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_MXYLt5" sboTerm="SBO:0000185" id="R_MXYLt5" name="M xylene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MXYLt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MXYLt6" sboTerm="SBO:0000185" id="R_MXYLt6" name="M xylene transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MXYLt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_M_XYLtpp" sboTerm="SBO:0000185" id="R_M_XYLtpp" name="Passive diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -77837,34 +87512,48 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NACt">
+            <rdf:Description rdf:about="#R_M_XYLtpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101808"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-8869603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05310"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08969"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12805"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_M_Xylt1" sboTerm="SBO:0000185" id="R_M_Xylt1" name="M xylene  outer membrane porin transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_M_Xylt1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12805"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_NADDPp_1" sboTerm="SBO:0000176" id="R_NADDPp_1" name="NAD diphosphatase, peroxisomal" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -78009,6 +87698,44 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NADH9" sboTerm="SBO:0000176" id="R_NADH9" name="NADH dehydrogenase (demethylmenaquinone-8 &amp; 0 protons)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NADH9">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08976"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dmmql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU09020"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU26470"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NADHHR" sboTerm="SBO:0000176" id="R_NADHHR" name="NADH hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -78031,6 +87758,9 @@
         <listOfProducts>
           <speciesReference species="M_nadhx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHPO" sboTerm="SBO:0000176" id="R_NADHPO" name="NADH peroxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -78479,6 +88209,9 @@
         <listOfProducts>
           <speciesReference species="M_nadphx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHQR2" sboTerm="SBO:0000176" id="R_NADPHQR2" name="NADPH Quinone Reductase (Ubiquinone-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -79358,60 +89091,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU22730"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4t" sboTerm="SBO:0000185" id="R_NH4t" name="Ammonia reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NH3c" sboTerm="SBO:0000176" id="R_NH3c" name="Ammomnium proton dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NH4t">
+            <rdf:Description rdf:about="#R_NH3c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101948"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU36510"/>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NH4t" sboTerm="SBO:0000185" id="R_NH4t" name="Ammonia reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -79419,7 +89128,60 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NH4tex">
+            <rdf:Description rdf:about="#R_NH4t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU36510"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
@@ -79464,9 +89226,63 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
             <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NH4tpp" sboTerm="SBO:0000185" id="R_NH4tpp" name="Ammonia reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NI2t4pp" sboTerm="SBO:0000185" id="R_NI2t4pp" name="Nickel transport out via antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80101,38 +89917,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NO3R1bpp" sboTerm="SBO:0000185" id="R_NO3R1bpp" name="Nitrate reductase (Ubiquinol-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NO3R1bpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29123"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29124"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09000"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_no3_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_NO3abc" sboTerm="SBO:0000185" id="R_NO3abc" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80443,6 +90227,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30310"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NP1_1" sboTerm="SBO:0000176" id="R_NP1_1" name="Nucleotide phosphatase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_NP1_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_nicrns_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NPHS" sboTerm="SBO:0000176" id="R_NPHS" name="Naphthoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80481,6 +90290,44 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NT5C" sboTerm="SBO:0000176" id="R_NT5C" name="5&apos;-nucleotidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NT5C">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02400"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nicrns_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU09190"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTD1" sboTerm="SBO:0000176" id="R_NTD1" name="5&apos;-nucleotidase (dUMP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -81304,6 +91151,90 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU28360"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP11" sboTerm="SBO:0000176" id="R_NTPP11" name="Nucleoside triphosphate pyrophosphorylase (xtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP11">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01962"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU28360"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NTPP11_1" sboTerm="SBO:0000176" id="R_NTPP11_1" name="Nucleoside triphosphate pyrophosphorylase (xtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_NTPP11_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU28360"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPP1_1" sboTerm="SBO:0000176" id="R_NTPP1_1" name="Nucleoside triphosphate pyrophosphorylase (dgtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -81917,7 +91848,7 @@
           <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_O2t" sboTerm="SBO:0000185" id="R_O2t" name="O2 transport  diffusion " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -81925,7 +91856,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2t">
+            <rdf:Description rdf:about="#R_O2tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
@@ -81943,9 +91874,45 @@
         <listOfReactants>
           <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="O2 transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_O2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OCBT_1" sboTerm="SBO:0000176" id="R_OCBT_1" name="Ornithine carbamoyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -82110,6 +92077,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_OCOAT4" sboTerm="SBO:0000176" id="R_OCOAT4" name="3 oxoacid CoA transferase  Succinyl CoA dehydrocarnitine " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_OCOAT4">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhcrn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dhcrncoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU19720"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_OCTDPS" sboTerm="SBO:0000176" id="R_OCTDPS" name="Octaprenyl pyrophosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82144,6 +92138,34 @@
           <speciesReference species="M_ppi_c" stoichiometry="5" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_OHEDH" sboTerm="SBO:0000176" id="R_OHEDH" name="2-oxo-hept-3-ene-1,7-dioate hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OHEDH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02883"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ohed_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_24dhhed_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_OIVD1r" sboTerm="SBO:0000176" id="R_OIVD1r" name="2-oxoisovalerate dehydrogenase (acylating; 4-methyl-2-oxopentaoate)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82310,6 +92332,9 @@
           <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OMPDC" sboTerm="SBO:0000176" id="R_OMPDC" name="Orotidine-5&apos;-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -82367,6 +92392,120 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU15550"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_OP4ENH" sboTerm="SBO:0000176" id="R_OP4ENH" name="2-oxopent-4-enoate hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OP4ENH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.80"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_op4en_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4h2opntn_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_OPETDC" sboTerm="SBO:0000176" id="R_OPETDC" name="OPET decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OPETDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR142617"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cohe_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hh24dd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU10750"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_OPTCCL" sboTerm="SBO:0000176" id="R_OPTCCL" name="5 carboxy 2 oxohept 3 enedioate decarboxylation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OPTCCL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR142617"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cohe_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hh24dd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU10750"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ORN5O" sboTerm="SBO:0000176" id="R_ORN5O" name="L ornithine 5 monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ORN5O">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n5horn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ORNR" sboTerm="SBO:0000176" id="R_ORNR" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82695,6 +92834,43 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30820"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_OXOAEL" sboTerm="SBO:0000176" id="R_OXOAEL" name="3-oxoadipate enol-lactone hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OXOAEL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.24"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-OXOADIPATE-ENOL-LACTONASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02144"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34100"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_P3PCL" sboTerm="SBO:0000176" id="R_P3PCL" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82852,6 +93028,42 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PA140abcpp" sboTerm="SBO:0000185" id="R_PA140abcpp" name="Phosphatidate transport via ABC system (n-C14:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PA140abcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09054"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa140_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU14320"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU37230"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PA141abcpp" sboTerm="SBO:0000185" id="R_PA141abcpp" name="Phosphatidate transport via ABC system (n-C14:1, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82924,6 +93136,42 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PA161abcpp" sboTerm="SBO:0000185" id="R_PA161abcpp" name="Phosphatidate transport via ABC system (n-C16:1, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PA161abcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09057"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa161_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa161_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU14320"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU37230"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PA180abcpp" sboTerm="SBO:0000185" id="R_PA180abcpp" name="Phosphatidate transport via ABC system (n-C18:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83142,6 +93390,30 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU22420"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PAP" sboTerm="SBO:0000176" id="R_PAP" name="Phosphatidate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PAP">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptdoh_MRSA_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dag_MRSA_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PAPA120pp" sboTerm="SBO:0000176" id="R_PAPA120pp" name="Phosphatidate phosphatase (periplasmic, n-C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83168,6 +93440,32 @@
           <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PAPA140pp" sboTerm="SBO:0000176" id="R_PAPA140pp" name="Phosphatidate phosphatase (periplasmic, n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PAPA140pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102348"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa140_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr140_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PAPA141pp" sboTerm="SBO:0000176" id="R_PAPA141pp" name="Phosphatidate phosphatase (periplasmic, n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83221,6 +93519,32 @@
           <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PAPA161pp" sboTerm="SBO:0000176" id="R_PAPA161pp" name="Phosphatidate phosphatase (periplasmic, n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PAPA161pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102353"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa161_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr161_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PAPA180pp" sboTerm="SBO:0000176" id="R_PAPA180pp" name="Phosphatidate phosphatase (periplasmic, n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83453,6 +93777,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PCADYOX" sboTerm="SBO:0000176" id="R_PCADYOX" name="Protocatechuate 3 4 dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PCADYOX">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROTOCATECHUATE-34-DIOXYGENASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01192"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_CCbuttc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PCNO" sboTerm="SBO:0000176" id="R_PCNO" name="Propanoyl-CoA:NADP+ 2-oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83492,34 +93850,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU10320"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PDBL_3" sboTerm="SBO:0000176" id="R_PDBL_3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_PDBL_3">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PDE1" sboTerm="SBO:0000176" id="R_PDE1" name="3&apos;,5&apos;-cyclic-nucleotide phosphodiesterase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83762,7 +94092,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30060"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PDIMAS" sboTerm="SBO:0000176" id="R_PDIMAS" name="PDIMAS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PDXPP" sboTerm="SBO:0000176" id="R_PDXPP" name="Pyridoxine 5-phosphate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -83770,27 +94100,39 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PDIMAS">
+            <rdf:Description rdf:about="#R_PDXPP">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102431"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.74"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01398"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_phthiocerol_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_tamocta_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pdx5p_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_pdima_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydxn_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU11140"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU28770"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PDIMAT" sboTerm="SBO:0000185" id="R_PDIMAT" name="Pdima translocase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PE120abcpp" sboTerm="SBO:0000185" id="R_PE120abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -83798,67 +94140,69 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PDIMAT">
+            <rdf:Description rdf:about="#R_PE120abcpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102432"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102441"/>
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             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_pdima_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe120_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_pdima_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe120_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU08310"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU14320"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU37230"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PDXPP" sboTerm="SBO:0000176" id="R_PDXPP" name="Pyridoxine 5-phosphate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PE141abcpp" sboTerm="SBO:0000185" id="R_PE141abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C14:1, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_PDXPP">
+            <rdf:Description rdf:about="#R_PE141abcpp">
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01911"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102443"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pdx5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe141_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe141_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pydxn_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
           <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_BSU11140"/>
-            <fbc:geneProductRef fbc:geneProduct="G_BSU28770"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU14320"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU37230"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PE120abcpp" sboTerm="SBO:0000185" id="R_PE120abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PE160abcpp" sboTerm="SBO:0000185" id="R_PE160abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C16:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -83866,10 +94210,11 @@
         </notes>
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           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PE120abcpp">
+            <rdf:Description rdf:about="#R_PE160abcpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09076"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -83878,12 +94223,12 @@
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pe120_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe160_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pe120_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe160_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
@@ -83893,7 +94238,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PE160abcpp" sboTerm="SBO:0000185" id="R_PE160abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C16:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PE161abcpp" sboTerm="SBO:0000185" id="R_PE161abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C16:1, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -83901,11 +94246,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PE160abcpp">
+            <rdf:Description rdf:about="#R_PE161abcpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102444"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102445"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -83914,12 +94258,12 @@
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pe160_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pe160_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
@@ -85115,65 +95459,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU37960"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PHTHDLS" sboTerm="SBO:0000176" id="R_PHTHDLS" name="PHTHDLS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PHTHDLS">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102645"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10762"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_prephth_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phthdl_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_PHTHS" sboTerm="SBO:0000176" id="R_PHTHS" name="PHTHS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PHTHS">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102647"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10700"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phthdl_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phthiocerol_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU27180"/>
-        </fbc:geneProductAssociation>
-      </reaction>
       <reaction metaid="R_PIMEtr" sboTerm="SBO:0000185" id="R_PIMEtr" name="PIMEtr" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85422,6 +95707,33 @@
           <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PLIPA1E141pp" sboTerm="SBO:0000176" id="R_PLIPA1E141pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C14:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PLIPA1E141pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102976"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe141_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2agpe141_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdcea_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PLIPA1E160pp" sboTerm="SBO:0000176" id="R_PLIPA1E160pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85451,6 +95763,33 @@
           <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PLIPA1E161pp" sboTerm="SBO:0000176" id="R_PLIPA1E161pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C16:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PLIPA1E161pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102978"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe161_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2agpe161_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PLIPA1E180pp" sboTerm="SBO:0000176" id="R_PLIPA1E180pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C18:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -86072,29 +96411,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU29470"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PPAP_Et" sboTerm="SBO:0000185" id="R_PPAP_Et" name="Propanoyl phosphate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_PPAP_Et">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_ppap_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ppap_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_PPAt4pp" sboTerm="SBO:0000185" id="R_PPAt4pp" name="Na+/Propionate symporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PPAt2pp" sboTerm="SBO:0000185" id="R_PPAt2pp" name="H+/Propionate symporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -86102,21 +96419,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PPAt4pp">
+            <rdf:Description rdf:about="#R_PPAt2pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103092"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ppa_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -86339,33 +96656,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PPDD" sboTerm="SBO:0000176" id="R_PPDD" name="Propanediol dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PPDD">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.28"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROPANEDIOL-DEHYDRATASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103104"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_12ppd__S_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PPDK" sboTerm="SBO:0000176" id="R_PPDK" name="Pyruvate,phosphate dikinase." reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87112,41 +97402,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU03520"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PREPTHS" sboTerm="SBO:0000176" id="R_PREPTHS" name="PREPTHS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PREPTHS">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103162"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_arachACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="13" constant="true"/>
-          <speciesReference species="M_malcoa_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_mmcoa__S_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="10" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="4" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="5" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="10" constant="true"/>
-          <speciesReference species="M_prephthACP_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU17220"/>
-        </fbc:geneProductAssociation>
-      </reaction>
       <reaction metaid="R_PREPTTA" sboTerm="SBO:0000176" id="R_PREPTTA" name="PREPTTA" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87343,6 +97598,67 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU03200"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PROGLYabcpp" sboTerm="SBO:0000185" id="R_PROGLYabcpp" name="L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PROGLYabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09189"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_progly_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_progly_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU11370"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU11390"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PROGLYtex" sboTerm="SBO:0000185" id="R_PROGLYtex" name="L-Prolinylglycine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PROGLYtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09190"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_progly_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_progly_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PROHISGLUtr" sboTerm="SBO:0000185" id="R_PROHISGLUtr" name="Tripeptide Opp3 transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87448,6 +97764,48 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PROabcpp" sboTerm="SBO:0000185" id="R_PROabcpp" name="L-proline transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PROabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29815#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29816#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29817#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29818#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-26-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09187"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU15340"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PROt2r" sboTerm="SBO:0000185" id="R_PROt2r" name="L proline reversible transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87490,6 +97848,71 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PROt2rpp" sboTerm="SBO:0000185" id="R_PROt2rpp" name="L-proline reversible transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PROt2rpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28964"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-29"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103211"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11167"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU03110"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PROtex" sboTerm="SBO:0000185" id="R_PROtex" name="L-proline transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PROtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11339"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pro__L_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PRPPS" sboTerm="SBO:0000176" id="R_PRPPS" name="Phosphoribosylpyrophosphate synthetase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87559,6 +97982,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU22600"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PSD141" sboTerm="SBO:0000176" id="R_PSD141" name="Phosphatidylserine decarboxylase (n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSD141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103231"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ps141_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe141_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PSD160" sboTerm="SBO:0000176" id="R_PSD160" name="Phosphatidylserine decarboxylase (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87587,6 +98036,33 @@
           <speciesReference species="M_pe160_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PSD161" sboTerm="SBO:0000176" id="R_PSD161" name="Phosphatidylserine decarboxylase (n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSD161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103233"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ps161_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe161_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PSD180" sboTerm="SBO:0000176" id="R_PSD180" name="Phosphatidylserine decarboxylase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87615,6 +98091,33 @@
           <speciesReference species="M_pe180_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PSD181" sboTerm="SBO:0000176" id="R_PSD181" name="Phosphatidylserine decarboxylase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSD181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103235"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ps181_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PSERT" sboTerm="SBO:0000176" id="R_PSERT" name="Phosphoserine transaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87786,6 +98289,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU04740"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PSSA141" sboTerm="SBO:0000176" id="R_PSSA141" name="Phosphatidylserine syntase (n-C14:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSSA141">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103268"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cdpdtdec7eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ps141_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PSSA160" sboTerm="SBO:0000176" id="R_PSSA160" name="Phosphatidylserine syntase (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87815,6 +98345,34 @@
           <speciesReference species="M_ps160_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PSSA161" sboTerm="SBO:0000176" id="R_PSSA161" name="Phosphatidylserine syntase (n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSSA161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103270"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cdpdhdec9eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ps161_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PSSA180" sboTerm="SBO:0000176" id="R_PSSA180" name="Phosphatidylserine syntase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87844,6 +98402,34 @@
           <speciesReference species="M_ps180_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PSSA181" sboTerm="SBO:0000176" id="R_PSSA181" name="Phosphatidylserine syntase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSSA181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103272"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ps181_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PSUDS" sboTerm="SBO:0000176" id="R_PSUDS" name="Pseudouridylate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -88531,6 +99117,60 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PXYLt5" sboTerm="SBO:0000185" id="R_PXYLt5" name="P xylene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PXYLt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PXYLt6" sboTerm="SBO:0000185" id="R_PXYLt6" name="P xylene transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PXYLt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PYDAMK" sboTerm="SBO:0000176" id="R_PYDAMK" name="Pyridoxamine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -88729,6 +99369,39 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PYDXS" sboTerm="SBO:0000176" id="R_PYDXS" name="Pyridoxal 5-phosphate synthase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYDXS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.3.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05144"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PYK" sboTerm="SBO:0000176" id="R_PYK" name="Pyruvate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -88886,7 +99559,51 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU14360"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PYRt4pp" sboTerm="SBO:0000185" id="R_PYRt4pp" name="Pyruvate transport via sodium symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PYOVDM1" sboTerm="SBO:0000176" id="R_PYOVDM1" name="Pyoverdine maduration I" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PYOVDM1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fbac_kt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pvdiq_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PYOVDM2" sboTerm="SBO:0000176" id="R_PYOVDM2" name="Pyoverdine maduration 2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PYOVDM2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_pvdiq_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyovd_kt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PYRt2rpp" sboTerm="SBO:0000185" id="R_PYRt2rpp" name="Pyruvate reversible transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -88894,21 +99611,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PYRt4pp">
+            <rdf:Description rdf:about="#R_PYRt2rpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-372359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-372342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-372347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09717"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09832"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -88946,7 +99670,59 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_QMO3" sboTerm="SBO:0000176" id="R_QMO3" name="Quinol monooxygenase (menaquinol 8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_P_XYLtpp" sboTerm="SBO:0000185" id="R_P_XYLtpp" name="P methyltoluene passive diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_P_XYLtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_P_Xylt1" sboTerm="SBO:0000185" id="R_P_Xylt1" name="P xylene  outer membrane porin transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_P_Xylt1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_QMO2" sboTerm="SBO:0000176" id="R_QMO2" name="Quinol monooxygenase (Ubiquinol-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -88954,27 +99730,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_QMO3">
+            <rdf:Description rdf:about="#R_QMO2">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103392"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_o2s_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_QULNS" sboTerm="SBO:0000176" id="R_QULNS" name="Quinolinate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -89718,6 +100494,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU05250"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_RECOAH23" sboTerm="SBO:0000176" id="R_RECOAH23" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxy  5Z  tetradecenyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RECOAH23">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3htd5coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tded5_2_coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU05250"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_RECOAH24" sboTerm="SBO:0000176" id="R_RECOAH24" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxy 5Z 8Z  tetradecedienyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91084,6 +101886,116 @@
           <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SALCHS1H" sboTerm="SBO:0000176" id="R_SALCHS1H" name="Salmochelin s1 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS1H">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104243"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs1_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhbzs_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchsx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHS2FER1" sboTerm="SBO:0000176" id="R_SALCHS2FER1" name="Salmochelin s2 Fe III reduction and offloading" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2FER1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104244"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_salchs2_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHS2FEabcpp" sboTerm="SBO:0000185" id="R_SALCHS2FEabcpp" name="Salmochelin s2 Fe III transport via ABC system periplasm" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2FEabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104247"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHS2H" sboTerm="SBO:0000176" id="R_SALCHS2H" name="Salmochelin s2 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2H">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104250"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchs1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchsx_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SALCHS2tex" sboTerm="SBO:0000185" id="R_SALCHS2tex" name="Salmochelin s2 secretion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91108,6 +102020,60 @@
           <speciesReference species="M_salchs2_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SALCHS4FEHpp" sboTerm="SBO:0000176" id="R_SALCHS4FEHpp" name="Salmochelin s4 fe3 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS4FEHpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104252"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs4fe_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchs2fe_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU32010"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_SALCHS4FEtonex" sboTerm="SBO:0000185" id="R_SALCHS4FEtonex" name="Salmochelin S4 Fe III transport via ton system extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS4FEtonex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104258"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs4fe_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs4fe_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SALCHS4Hpp" sboTerm="SBO:0000176" id="R_SALCHS4Hpp" name="Salmochelin s4 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91165,6 +102131,54 @@
           <speciesReference species="M_salchs4_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SALCHSXtex" sboTerm="SBO:0000185" id="R_SALCHSXtex" name="Salmochelin SX via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHSXtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104262"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_salchsx_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchsx_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHSXtpp" sboTerm="SBO:0000185" id="R_SALCHSXtpp" name="Salmochelin SX facilitated transport periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHSXtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104262"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_salchsx_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchsx_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SALCpts" sboTerm="SBO:0000185" id="R_SALCpts" name="Salicin transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91549,6 +102563,86 @@
           <speciesReference species="M_sl2a6o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SELabcpp" sboTerm="SBO:0000185" id="R_SELabcpp" name="Selenatenate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SELabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sel_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU01950"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_SELt" sboTerm="SBO:0000185" id="R_SELt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SELt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SELtex" sboTerm="SBO:0000185" id="R_SELtex" name="Selenate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SELtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104327"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sel_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SERASr" sboTerm="SBO:0000176" id="R_SERASr" name="(L-seryl)adenylate synthase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -92945,33 +104039,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU30780"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_SUCBZT1" sboTerm="SBO:0000176" id="R_SUCBZT1" name="Succinyl:benzoate CoA transferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SUCBZT1">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104614"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
-          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_benzcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_SUCCt2r" sboTerm="SBO:0000185" id="R_SUCCt2r" name="Succinate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93045,33 +104112,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_SUCD2" sboTerm="SBO:0000176" id="R_SUCD2" name="Succinate dehydrogenase dehydrogenase (menaquinone 8 as acceptor)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_SUCD2">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_mqn7_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mql7_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_SUCD4" sboTerm="SBO:0000176" id="R_SUCD4" name="Succinate dehyrdogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93137,6 +104177,30 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SUCMALt" sboTerm="SBO:0000185" id="R_SUCMALt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SUCMALt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mal__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SUCOAS" sboTerm="SBO:0000176" id="R_SUCOAS" name="Succinyl-CoA synthetase (ADP-forming)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93267,6 +104331,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU32590"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SUCRtex" sboTerm="SBO:0000185" id="R_SUCRtex" name="Sucrose transport transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SUCRtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09275"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_sucr_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sucr_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SUCpts" sboTerm="SBO:0000185" id="R_SUCpts" name="Sucrose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93310,6 +104399,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SUCptspp" sboTerm="SBO:0000185" id="R_SUCptspp" name="Sucrose transport via PEP:Pyr  (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SUCptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09274"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sucr_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_suc6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SULAabc" sboTerm="SBO:0000185" id="R_SULAabc" name="Sulfoacetate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93475,6 +104595,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_St" sboTerm="SBO:0000185" id="R_St" name="Sulfur diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_St">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_s_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TAGURr" sboTerm="SBO:0000176" id="R_TAGURr" name="Tagaturonate reductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93741,6 +104888,56 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TCYNTtex" sboTerm="SBO:0000185" id="R_TCYNTtex" name="Thiocyanate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TCYNTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09287"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TCYNTtpp" sboTerm="SBO:0000185" id="R_TCYNTtpp" name="Thiocyanate transport via diffusion  periplasm to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TCYNTtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TECA1S45" sboTerm="SBO:0000176" id="R_TECA1S45" name="Glycerol teichoic acid  n45   unlinked  unsubstituted" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94045,6 +105242,34 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_THMP" sboTerm="SBO:0000176" id="R_THMP" name="Thiamin phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_THMP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01539"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thmmp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_THMabc" sboTerm="SBO:0000185" id="R_THMabc" name="Thiamine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94239,7 +105464,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_THRabcpp" sboTerm="SBO:0000185" id="R_THRabcpp" name="L-threonine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_THRt2pp" sboTerm="SBO:0000185" id="R_THRt2pp" name="L-threonine efflux transport via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -94247,30 +105472,35 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_THRabcpp">
+            <rdf:Description rdf:about="#R_THRt2pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-0244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13747"/>
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             </rdf:Description>
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         </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU37630"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_THRt2pp" sboTerm="SBO:0000185" id="R_THRt2pp" name="L-threonine efflux transport via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_THRt4pp" sboTerm="SBO:0000185" id="R_THRt4pp" name="L-threonine  via sodium symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -94278,33 +105508,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_THRt2pp">
+            <rdf:Description rdf:about="#R_THRt4pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28998"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-0244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09304"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104842"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10186"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thr__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_BSU37630"/>
-        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_THYMt" sboTerm="SBO:0000185" id="R_THYMt" name="Thymine reversible transport via facilated diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -94420,6 +105642,43 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU27510"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_THZSN_1" sboTerm="SBO:0000176" id="R_THZSN_1" name="Thiazole synthesis from xylulose" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_THZSN_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104863"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dxyl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fdxo_2_2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4mhetz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fdxrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU11690"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TKT1" sboTerm="SBO:0000176" id="R_TKT1" name="Transketolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94752,6 +106011,241 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TNTHAC1" sboTerm="SBO:0000176" id="R_TNTHAC1" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTHAC1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmdh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_35dnta_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTHAC2" sboTerm="SBO:0000176" id="R_TNTHAC2" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTHAC2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmdh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2m35mdntha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTR1" sboTerm="SBO:0000176" id="R_TNTR1" name="TNT nitroreductase 4 Hydroxylamino 2 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU23820"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTR2" sboTerm="SBO:0000176" id="R_TNTR2" name="TNT nitroreductase 2 Hydroxylamino 4 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU23820"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTR3" sboTerm="SBO:0000176" id="R_TNTR3" name="TNT nitroreductase Meisenheimer monohydride complex forming " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmmh_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TNTR4" sboTerm="SBO:0000176" id="R_TNTR4" name="TNT nitroreductase Meisenheimer dihydride complex forming " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR4">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmmh_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmdh_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TNTtex" sboTerm="SBO:0000185" id="R_TNTtex" name="Trinitrotoluene transport via diffusion  extracellular to periplasm  irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tnt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TNTtpp" sboTerm="SBO:0000185" id="R_TNTtpp" name="Trinitrotoluene transport via diffusion  periplasm to cytosol  irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tnt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TOLt5" sboTerm="SBO:0000185" id="R_TOLt5" name="Toluene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TOLt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TOLt6" sboTerm="SBO:0000185" id="R_TOLt6" name="Toluene transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94779,6 +106273,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TOLt7" sboTerm="SBO:0000185" id="R_TOLt7" name="Toluene  transport out via proton antiport  cytosolperiplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TOLt7">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU05680"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TOLtex" sboTerm="SBO:0000185" id="R_TOLtex" name="Toluene  outer membrane porin transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94811,6 +106332,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TOLtpp" sboTerm="SBO:0000185" id="R_TOLtpp" name="Toluene transport via diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TOLtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12815"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_TPI" sboTerm="SBO:0000176" id="R_TPI" name="Triose-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94966,40 +106513,46 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TREHpp" sboTerm="SBO:0000176" id="R_TREHpp" name="Alpha,alpha-trehalase (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TREpts" sboTerm="SBO:0000185" id="R_TREpts" name="Trehalose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TREHpp">
+            <rdf:Description rdf:about="#R_TREpts">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/20868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/20869"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/20870"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/20871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.28"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95163"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.69"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09322"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_tre_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_glc__D_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre6p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU07800"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU13900"/>
+              <fbc:geneProductRef fbc:geneProduct="G_BSU13910"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TREpts" sboTerm="SBO:0000185" id="R_TREpts" name="Trehalose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TREptspp" sboTerm="SBO:0000185" id="R_TREptspp" name="Trehalose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -95007,7 +106560,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TREpts">
+            <rdf:Description rdf:about="#R_TREptspp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.69"/>
@@ -95021,21 +106574,14 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_tre_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_tre6p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
-            <fbc:and>
-              <fbc:geneProductRef fbc:geneProduct="G_BSU07800"/>
-              <fbc:geneProductRef fbc:geneProduct="G_BSU13900"/>
-              <fbc:geneProductRef fbc:geneProduct="G_BSU13910"/>
-            </fbc:and>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU34740"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TREtex" sboTerm="SBO:0000185" id="R_TREtex" name="Trehalose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -95407,7 +106953,140 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TTDCAt2pp" sboTerm="SBO:0000185" id="R_TTDCAt2pp" name="Tetradecanoate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TTRCYCt2pp" sboTerm="SBO:0000185" id="R_TTRCYCt2pp" name="Tetracycline transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCt2pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TTRCYCt5" sboTerm="SBO:0000185" id="R_TTRCYCt5" name="Tetracycline transport via TtgABC  system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TTRCYCt7pp" sboTerm="SBO:0000185" id="R_TTRCYCt7pp" name="Tetracycline Efflux  MSF " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCt7pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU05680"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TTRCYCtex" sboTerm="SBO:0000185" id="R_TTRCYCtex" name="Tetracycline transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TTRCYCtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104976"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TTRCYCtm" sboTerm="SBO:0000185" id="R_TTRCYCtm" name="Tetracyline/H+ Antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCtm">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU36450"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TTRCYCtpp" sboTerm="SBO:0000185" id="R_TTRCYCtpp" name="Tetracycline transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -95415,10 +107094,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TTDCAt2pp">
+            <rdf:Description rdf:about="#R_TTRCYCtpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104971"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104977"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -95426,12 +107105,55 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU02570"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TYRL" sboTerm="SBO:0000176" id="R_TYRL" name="Tyrosine lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TYRL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.19"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104993"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4crsol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhgly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU11690"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TYRTA" sboTerm="SBO:0000176" id="R_TYRTA" name="Tyrosine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -96200,6 +107922,65 @@
           <speciesReference species="M_ugmd_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_UM4PCP" sboTerm="SBO:0000176" id="R_UM4PCP" name="UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine L,D-carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UM4PCP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105116"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_um4p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ugmd_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU12970"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_UM4PL" sboTerm="SBO:0000176" id="R_UM4PL" name="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UM4PL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09360"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_LalaDgluMdapDala_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_uamr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_um4p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UMPK" sboTerm="SBO:0000176" id="R_UMPK" name="UMP kinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -96602,32 +108383,23 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU37940"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_URAtex" sboTerm="SBO:0000185" id="R_URAtex" name="Uracil transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_URAtpp" sboTerm="SBO:0000185" id="R_URAtpp" name="Uracil export via facillitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_URAtex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27320"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28622"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09366"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10993"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_URAtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_ura_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_ura_p" stoichiometry="1" constant="true"/>
@@ -96990,6 +108762,61 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_VACOAI" sboTerm="SBO:0000176" id="R_VACOAI" name="Vinylacetyl-CoA Delta-isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VACOAI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10572"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.3.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VINYLACETYL-COA-DELTA-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02171"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_vaccoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_VACOAI_2" sboTerm="SBO:0000176" id="R_VACOAI_2" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_VACOAI_2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_vaccoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctncoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_VALDHr" sboTerm="SBO:0000176" id="R_VALDHr" name="Valine dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97156,6 +108983,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_VALtex" sboTerm="SBO:0000185" id="R_VALtex" name="L-valine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VALtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09375"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_val__L_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU13680"/>
+            <fbc:geneProductRef fbc:geneProduct="G_BSU29720"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_VECOAH" sboTerm="SBO:0000176" id="R_VECOAH" name="3-hydroxyacyl-CoA dehydratase (3-hydroxypentanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97224,6 +109088,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_BSU05370"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_X5PL3E" sboTerm="SBO:0000176" id="R_X5PL3E" name="L-xylulose 5-phosphate 3-epimerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_X5PL3E">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.-.-.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LXULRU5P-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02321"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_xu5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ru5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_XAND" sboTerm="SBO:0000176" id="R_XAND" name="Xanthine dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97310,6 +109207,71 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_XANt2pp" sboTerm="SBO:0000185" id="R_XANt2pp" name="Xanthine transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XANt2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-5076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09377"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU37940"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_XANtpp" sboTerm="SBO:0000185" id="R_XANtpp" name="Xanthine reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XANtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09652"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_XPPT" sboTerm="SBO:0000176" id="R_XPPT" name="Xanthine phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97594,6 +109556,67 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_XYLt2pp" sboTerm="SBO:0000185" id="R_XYLt2pp" name="D-xylose transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XYLt2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09384"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xyl__D_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xyl__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_BSU10580"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_XYLtex" sboTerm="SBO:0000185" id="R_XYLtex" name="D-xylose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XYLtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09650"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_xyl__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_xyl__D_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_YUMPS" sboTerm="SBO:0000176" id="R_YUMPS" name="YUMP synthetase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98284,6 +110307,16 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_sink_4crsol_c" sboTerm="SBO:0000632" id="R_sink_4crsol_c" name="R_sink_4crsol_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000632</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4crsol_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_sink_amob_c" sboTerm="SBO:0000632" id="R_sink_amob_c" name="R_sink_amob_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98364,6 +110397,16 @@
           <speciesReference species="M_2ddglcn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_2dhglcn_e" sboTerm="SBO:0000627" id="R_EX_2dhglcn_e" name="R_EX_2dhglcn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_2dhglcn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_2hxmp_e" sboTerm="SBO:0000627" id="R_EX_2hxmp_e" name="R_EX_2hxmp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98374,6 +110417,16 @@
           <speciesReference species="M_2hxmp_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_2m35mdntha_e" sboTerm="SBO:0000627" id="R_EX_2m35mdntha_e" name="R_EX_2m35mdntha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_2pglyc_e" sboTerm="SBO:0000627" id="R_EX_2pglyc_e" name="R_EX_2pglyc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98384,6 +110437,16 @@
           <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_35dnta_e" sboTerm="SBO:0000627" id="R_EX_35dnta_e" name="R_EX_35dnta_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_3amp_e" sboTerm="SBO:0000627" id="R_EX_3amp_e" name="R_EX_3amp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98434,34 +110497,54 @@
           <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_4abutn_e" sboTerm="SBO:0000627" id="R_EX_4abutn_e" name="R_EX_4abutn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_4ahmmp_e" sboTerm="SBO:0000627" id="R_EX_4ahmmp_e" name="R_EX_4ahmmp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4abutn_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4ahmmp_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_4ahmmp_e" sboTerm="SBO:0000627" id="R_EX_4ahmmp_e" name="R_EX_4ahmmp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_4hba_e" sboTerm="SBO:0000627" id="R_EX_4hba_e" name="R_EX_4hba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4ahmmp_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_4hba_e" sboTerm="SBO:0000627" id="R_EX_4hba_e" name="R_EX_4hba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_4hbald_e" sboTerm="SBO:0000627" id="R_EX_4hbald_e" name="R_EX_4hbald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_4hbz_e" sboTerm="SBO:0000627" id="R_EX_4hbz_e" name="R_EX_4hbz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4hbz_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_4hoxpac_e" sboTerm="SBO:0000627" id="R_EX_4hoxpac_e" name="R_EX_4hoxpac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4hoxpac_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_4hpro_DC_e" sboTerm="SBO:0000627" id="R_EX_4hpro_DC_e" name="R_EX_4hpro_DC_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -98494,54 +110577,54 @@
           <speciesReference species="M_5dglcn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_LalaDgluMdapDala_e" sboTerm="SBO:0000627" id="R_EX_LalaDgluMdapDala_e" name="R_EX_LalaDgluMdapDala_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_5drib_e" sboTerm="SBO:0000627" id="R_EX_5drib_e" name="R_EX_5drib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_LalaDgluMdapDala_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_5drib_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_LalaLglu_e" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e" name="R_EX_LalaLglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_LalaDgluMdap_e" sboTerm="SBO:0000627" id="R_EX_LalaDgluMdap_e" name="R_EX_LalaDgluMdap_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_LalaDgluMdap_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_Larab_e" sboTerm="SBO:0000627" id="R_EX_Larab_e" name="R_EX_Larab_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_LalaLglu_e" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e" name="R_EX_LalaLglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_Larab_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_Lcyst_e" sboTerm="SBO:0000627" id="R_EX_Lcyst_e" name="R_EX_Lcyst_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_Larab_e" sboTerm="SBO:0000627" id="R_EX_Larab_e" name="R_EX_Larab_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_Larab_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_abt__L_e" sboTerm="SBO:0000627" id="R_EX_abt__L_e" name="R_EX_abt__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_Lcyst_e" sboTerm="SBO:0000627" id="R_EX_Lcyst_e" name="R_EX_Lcyst_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_abt__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_ac_e" sboTerm="SBO:0000627" id="R_EX_ac_e" name="R_EX_ac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -98584,24 +110667,24 @@
           <speciesReference species="M_acmana_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_acmum_e" sboTerm="SBO:0000627" id="R_EX_acmum_e" name="R_EX_acmum_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_acnam_e" sboTerm="SBO:0000627" id="R_EX_acnam_e" name="R_EX_acnam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_acmum_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acnam_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_acnam_e" sboTerm="SBO:0000627" id="R_EX_acnam_e" name="R_EX_acnam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_acon_C_e" sboTerm="SBO:0000627" id="R_EX_acon_C_e" name="R_EX_acon_C_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_acnam_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_actn__R_e" sboTerm="SBO:0000627" id="R_EX_actn__R_e" name="R_EX_actn__R_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -98614,6 +110697,16 @@
           <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ad_e" sboTerm="SBO:0000627" id="R_EX_ad_e" name="R_EX_ad_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ad_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_adn_e" sboTerm="SBO:0000627" id="R_EX_adn_e" name="R_EX_adn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98784,6 +110877,16 @@
           <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ascb__L_e" sboTerm="SBO:0000627" id="R_EX_ascb__L_e" name="R_EX_ascb__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_asn__L_e" sboTerm="SBO:0000627" id="R_EX_asn__L_e" name="R_EX_asn__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98794,6 +110897,26 @@
           <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_aso3_e" sboTerm="SBO:0000627" id="R_EX_aso3_e" name="R_EX_aso3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_aso4_e" sboTerm="SBO:0000627" id="R_EX_aso4_e" name="R_EX_aso4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_asp__L_e" sboTerm="SBO:0000627" id="R_EX_asp__L_e" name="R_EX_asp__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98954,6 +111077,16 @@
           <speciesReference species="M_cobalt2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_crn_e" sboTerm="SBO:0000627" id="R_EX_crn_e" name="R_EX_crn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_crn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_csn_e" sboTerm="SBO:0000627" id="R_EX_csn_e" name="R_EX_csn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98964,6 +111097,16 @@
           <speciesReference species="M_csn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ctbt_e" sboTerm="SBO:0000627" id="R_EX_ctbt_e" name="R_EX_ctbt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ctbt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cu2_e" sboTerm="SBO:0000627" id="R_EX_cu2_e" name="R_EX_cu2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98974,6 +111117,26 @@
           <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_cu_e" sboTerm="SBO:0000627" id="R_EX_cu_e" name="R_EX_cu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cu_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_cyan_e" sboTerm="SBO:0000627" id="R_EX_cyan_e" name="R_EX_cyan_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cys__L_e" sboTerm="SBO:0000627" id="R_EX_cys__L_e" name="R_EX_cys__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99034,6 +111197,16 @@
           <speciesReference species="M_drib_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_dxyl_e" sboTerm="SBO:0000627" id="R_EX_dxyl_e" name="R_EX_dxyl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_dxyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_etha_e" sboTerm="SBO:0000627" id="R_EX_etha_e" name="R_EX_etha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99064,34 +111237,34 @@
           <speciesReference species="M_etoh_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_fald_e" sboTerm="SBO:0000627" id="R_EX_fald_e" name="R_EX_fald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_fe2_e" sboTerm="SBO:0000627" id="R_EX_fe2_e" name="R_EX_fe2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_fe2_e" sboTerm="SBO:0000627" id="R_EX_fe2_e" name="R_EX_fe2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_fe3_e" sboTerm="SBO:0000627" id="R_EX_fe3_e" name="R_EX_fe3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_fe2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_fe3_e" sboTerm="SBO:0000627" id="R_EX_fe3_e" name="R_EX_fe3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_fe3dcit_e" sboTerm="SBO:0000627" id="R_EX_fe3dcit_e" name="R_EX_fe3dcit_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_fe3pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_kt_e" name="R_EX_fe3pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -99554,6 +111727,16 @@
           <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_h2s_e" sboTerm="SBO:0000627" id="R_EX_h2s_e" name="R_EX_h2s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_h_e" sboTerm="SBO:0000627" id="R_EX_h_e" name="R_EX_h_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99564,6 +111747,16 @@
           <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_hco3_e" sboTerm="SBO:0000627" id="R_EX_hco3_e" name="R_EX_hco3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_hexs_e" sboTerm="SBO:0000627" id="R_EX_hexs_e" name="R_EX_hexs_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99774,6 +111967,16 @@
           <speciesReference species="M_lysglugly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_m_xyl_e" sboTerm="SBO:0000627" id="R_EX_m_xyl_e" name="R_EX_m_xyl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_madg_e" sboTerm="SBO:0000627" id="R_EX_madg_e" name="R_EX_madg_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99984,16 +112187,6 @@
           <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_nac_e" sboTerm="SBO:0000627" id="R_EX_nac_e" name="R_EX_nac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_nh4_e" sboTerm="SBO:0000627" id="R_EX_nh4_e" name="R_EX_nh4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100064,24 +112257,24 @@
           <speciesReference species="M_oxa_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_pacald_e" sboTerm="SBO:0000627" id="R_EX_pacald_e" name="R_EX_pacald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_p_xyl_e" sboTerm="SBO:0000627" id="R_EX_p_xyl_e" name="R_EX_p_xyl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_pdima_e" sboTerm="SBO:0000627" id="R_EX_pdima_e" name="R_EX_pdima_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_pacald_e" sboTerm="SBO:0000627" id="R_EX_pacald_e" name="R_EX_pacald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_pdima_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_phe__L_e" sboTerm="SBO:0000627" id="R_EX_phe__L_e" name="R_EX_phe__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -100144,44 +112337,44 @@
           <speciesReference species="M_ppa_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ppap_e" sboTerm="SBO:0000627" id="R_EX_ppap_e" name="R_EX_ppap_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_ppi_e" sboTerm="SBO:0000627" id="R_EX_ppi_e" name="R_EX_ppi_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_ppap_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ppi_e" sboTerm="SBO:0000627" id="R_EX_ppi_e" name="R_EX_ppi_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_ppoh_e" sboTerm="SBO:0000627" id="R_EX_ppoh_e" name="R_EX_ppoh_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_ppi_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppoh_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ppoh_e" sboTerm="SBO:0000627" id="R_EX_ppoh_e" name="R_EX_ppoh_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_pro__L_e" sboTerm="SBO:0000627" id="R_EX_pro__L_e" name="R_EX_pro__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_ppoh_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_pro__L_e" sboTerm="SBO:0000627" id="R_EX_pro__L_e" name="R_EX_pro__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_progly_e" sboTerm="SBO:0000627" id="R_EX_progly_e" name="R_EX_progly_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_pro__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_progly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_prohisglu_e" sboTerm="SBO:0000627" id="R_EX_prohisglu_e" name="R_EX_prohisglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -100274,6 +112467,16 @@
           <speciesReference species="M_rmn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_s_e" sboTerm="SBO:0000627" id="R_EX_s_e" name="R_EX_s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_salc_e" sboTerm="SBO:0000627" id="R_EX_salc_e" name="R_EX_salc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100294,6 +112497,26 @@
           <speciesReference species="M_salchs2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_salchs4fe_e" sboTerm="SBO:0000627" id="R_EX_salchs4fe_e" name="R_EX_salchs4fe_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_salchs4fe_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_salchsx_e" sboTerm="SBO:0000627" id="R_EX_salchsx_e" name="R_EX_salchsx_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_salchsx_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_salcn_e" sboTerm="SBO:0000627" id="R_EX_salcn_e" name="R_EX_salcn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100314,6 +112537,16 @@
           <speciesReference species="M_sbt__D_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_sel_e" sboTerm="SBO:0000627" id="R_EX_sel_e" name="R_EX_sel_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ser__D_e" sboTerm="SBO:0000627" id="R_EX_ser__D_e" name="R_EX_ser__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100454,6 +112687,16 @@
           <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_tcynt_e" sboTerm="SBO:0000627" id="R_EX_tcynt_e" name="R_EX_tcynt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_thm_e" sboTerm="SBO:0000627" id="R_EX_thm_e" name="R_EX_thm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100494,6 +112737,16 @@
           <speciesReference species="M_thymd_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_tnt_e" sboTerm="SBO:0000627" id="R_EX_tnt_e" name="R_EX_tnt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_tol_e" sboTerm="SBO:0000627" id="R_EX_tol_e" name="R_EX_tol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100715,29 +112968,37 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_ACt2r_1" sboTerm="SBO:0000185" id="R_ACt2r_1" name="Acetate reversible transport via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
+      <reaction metaid="R_CAt6" sboTerm="SBO:0000185" id="R_CAt6" name="CAt6" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
             <p>GAP_FILL: M9</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ACt2r_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CAt6">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10448"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
     </listOfReactions>
@@ -100772,6 +113033,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_spontaneous" sboTerm="SBO:0000243" fbc:id="G_spontaneous" fbc:name="G_spontaneous" fbc:label="G_spontaneous">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU34680" sboTerm="SBO:0000243" fbc:id="G_BSU34680" fbc:name="G_BSU34680" fbc:label="G_BSU34680">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100824,14 +113092,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13680" sboTerm="SBO:0000243" fbc:id="G_BSU13680" fbc:name="G_BSU13680" fbc:label="G_BSU13680">
+      <fbc:geneProduct metaid="G_BSU29720" sboTerm="SBO:0000243" fbc:id="G_BSU29720" fbc:name="G_BSU29720" fbc:label="G_BSU29720">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29720" sboTerm="SBO:0000243" fbc:id="G_BSU29720" fbc:name="G_BSU29720" fbc:label="G_BSU29720">
+      <fbc:geneProduct metaid="G_BSU13680" sboTerm="SBO:0000243" fbc:id="G_BSU13680" fbc:name="G_BSU13680" fbc:label="G_BSU13680">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -100864,6 +113132,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU10590" sboTerm="SBO:0000243" fbc:id="G_BSU10590" fbc:name="G_BSU10590" fbc:label="G_BSU10590">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU10590">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945830"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10674"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU13000" sboTerm="SBO:0000243" fbc:id="G_BSU13000" fbc:name="G_BSU13000" fbc:label="G_BSU13000">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100885,27 +113174,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10590" sboTerm="SBO:0000243" fbc:id="G_BSU10590" fbc:name="G_BSU10590" fbc:label="G_BSU10590">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU10590">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004172"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945830"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10674"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU37960" sboTerm="SBO:0000243" fbc:id="G_BSU37960" fbc:name="G_BSU37960" fbc:label="G_BSU37960">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100932,6 +113200,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU18620" sboTerm="SBO:0000243" fbc:id="G_BSU18620" fbc:name="G_BSU18620" fbc:label="G_BSU18620">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU34470" sboTerm="SBO:0000243" fbc:id="G_BSU34470" fbc:name="G_BSU34470" fbc:label="G_BSU34470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100991,6 +113266,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU05840" sboTerm="SBO:0000243" fbc:id="G_BSU05840" fbc:name="G_BSU05840" fbc:label="G_BSU05840">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU05840">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001360"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018120"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18A15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18A15"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU29560" sboTerm="SBO:0000243" fbc:id="G_BSU29560" fbc:name="G_BSU29560" fbc:label="G_BSU29560">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101151,7 +113449,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU19310" sboTerm="SBO:0000243" fbc:id="G_BSU19310" fbc:name="G_BSU19310" fbc:label="G_BSU19310">
+      <fbc:geneProduct metaid="G_BSU39860" sboTerm="SBO:0000243" fbc:id="G_BSU39860" fbc:name="G_BSU39860" fbc:label="G_BSU39860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101159,24 +113457,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU19310">
+            <rdf:Description rdf:about="#G_BSU39860">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012394"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015590"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016160"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016161"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016162"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016163"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029510"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12582"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46329"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39860" sboTerm="SBO:0000243" fbc:id="G_BSU39860" fbc:name="G_BSU39860" fbc:label="G_BSU39860">
+      <fbc:geneProduct metaid="G_BSU19310" sboTerm="SBO:0000243" fbc:id="G_BSU19310" fbc:name="G_BSU19310" fbc:label="G_BSU19310">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101184,18 +113483,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39860">
+            <rdf:Description rdf:about="#G_BSU19310">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012394"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015590"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015657"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016161"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016162"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016163"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029510"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11355"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34660"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -101279,13 +113577,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10350" sboTerm="SBO:0000243" fbc:id="G_BSU10350" fbc:name="G_BSU10350" fbc:label="G_BSU10350">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU24170" sboTerm="SBO:0000243" fbc:id="G_BSU24170" fbc:name="G_BSU24170" fbc:label="G_BSU24170">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101313,6 +113604,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU10350" sboTerm="SBO:0000243" fbc:id="G_BSU10350" fbc:name="G_BSU10350" fbc:label="G_BSU10350">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU32830" sboTerm="SBO:0000243" fbc:id="G_BSU32830" fbc:name="G_BSU32830" fbc:label="G_BSU32830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101340,32 +113638,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU22440" sboTerm="SBO:0000243" fbc:id="G_BSU22440" fbc:name="G_BSU22440" fbc:label="G_BSU22440">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU22440">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004408"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004409"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11206"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P0CI75"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU18240" sboTerm="SBO:0000243" fbc:id="G_BSU18240" fbc:name="G_BSU18240" fbc:label="G_BSU18240">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101409,7 +113681,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29200" sboTerm="SBO:0000243" fbc:id="G_BSU29200" fbc:name="G_BSU29200" fbc:label="G_BSU29200">
+      <fbc:geneProduct metaid="G_BSU29210" sboTerm="SBO:0000243" fbc:id="G_BSU29210" fbc:name="G_BSU29210" fbc:label="G_BSU29210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101417,21 +113689,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29200">
+            <rdf:Description rdf:about="#G_BSU29210">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011762"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12557"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP93"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29210" sboTerm="SBO:0000243" fbc:id="G_BSU29210" fbc:name="G_BSU29210" fbc:label="G_BSU29210">
+      <fbc:geneProduct metaid="G_BSU29200" sboTerm="SBO:0000243" fbc:id="G_BSU29200" fbc:name="G_BSU29200" fbc:label="G_BSU29200">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101439,15 +113712,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29210">
+            <rdf:Description rdf:about="#G_BSU29200">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000438"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011763"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP93"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34847"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -101506,7 +113778,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU07700" sboTerm="SBO:0000243" fbc:id="G_BSU07700" fbc:name="G_BSU07700" fbc:label="G_BSU07700">
+      <fbc:geneProduct metaid="G_BSU22440" sboTerm="SBO:0000243" fbc:id="G_BSU22440" fbc:name="G_BSU22440" fbc:label="G_BSU22440">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101514,23 +113786,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU07700">
+            <rdf:Description rdf:about="#G_BSU22440">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010974"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12941"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P0CI75"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34740" sboTerm="SBO:0000243" fbc:id="G_BSU34740" fbc:name="G_BSU34740" fbc:label="G_BSU34740">
+      <fbc:geneProduct metaid="G_BSU13910" sboTerm="SBO:0000243" fbc:id="G_BSU13910" fbc:name="G_BSU13910" fbc:label="G_BSU13910">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101538,26 +113812,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34740">
+            <rdf:Description rdf:about="#G_BSU13910">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007962"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA04"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10788"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005698"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJF6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P08838"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13910" sboTerm="SBO:0000243" fbc:id="G_BSU13910" fbc:name="G_BSU13910" fbc:label="G_BSU13910">
+      <fbc:geneProduct metaid="G_BSU07700" sboTerm="SBO:0000243" fbc:id="G_BSU07700" fbc:name="G_BSU07700" fbc:label="G_BSU07700">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101565,25 +113839,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU13910">
+            <rdf:Description rdf:about="#G_BSU07700">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008279"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023151"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P08838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34521"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU22230" sboTerm="SBO:0000243" fbc:id="G_BSU22230" fbc:name="G_BSU22230" fbc:label="G_BSU22230">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU13900" sboTerm="SBO:0000243" fbc:id="G_BSU13900" fbc:name="G_BSU13900" fbc:label="G_BSU13900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101616,14 +113894,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU22230" sboTerm="SBO:0000243" fbc:id="G_BSU22230" fbc:name="G_BSU22230" fbc:label="G_BSU22230">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11210" sboTerm="SBO:0000243" fbc:id="G_BSU11210" fbc:name="G_BSU11210" fbc:label="G_BSU11210">
+      <fbc:geneProduct metaid="G_BSU34740" sboTerm="SBO:0000243" fbc:id="G_BSU34740" fbc:name="G_BSU34740" fbc:label="G_BSU34740">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101631,21 +113902,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11210">
+            <rdf:Description rdf:about="#G_BSU34740">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001057"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10193"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P68729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA04"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJF6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175816"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11200" sboTerm="SBO:0000243" fbc:id="G_BSU11200" fbc:name="G_BSU11200" fbc:label="G_BSU11200">
+      <fbc:geneProduct metaid="G_BSU11210" sboTerm="SBO:0000243" fbc:id="G_BSU11210" fbc:name="G_BSU11210" fbc:label="G_BSU11210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101653,13 +113929,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11200">
+            <rdf:Description rdf:about="#G_BSU11210">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016117"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10192"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P68729"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -101697,6 +113974,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU11200" sboTerm="SBO:0000243" fbc:id="G_BSU11200" fbc:name="G_BSU11200" fbc:label="G_BSU11200">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU11200">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36843"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU28300" sboTerm="SBO:0000243" fbc:id="G_BSU28300" fbc:name="G_BSU28300" fbc:label="G_BSU28300">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101719,7 +114017,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU36010" sboTerm="SBO:0000243" fbc:id="G_BSU36010" fbc:name="G_BSU36010" fbc:label="G_BSU36010">
+      <fbc:geneProduct metaid="G_BSU28310" sboTerm="SBO:0000243" fbc:id="G_BSU28310" fbc:name="G_BSU28310" fbc:label="G_BSU28310">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101727,25 +114025,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU36010">
+            <rdf:Description rdf:about="#G_BSU28310">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000399"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011766"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012000"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012846"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029035"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10471"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q04789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P37251"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28310" sboTerm="SBO:0000243" fbc:id="G_BSU28310" fbc:name="G_BSU28310" fbc:label="G_BSU28310">
+      <fbc:geneProduct metaid="G_BSU36010" sboTerm="SBO:0000243" fbc:id="G_BSU36010" fbc:name="G_BSU36010" fbc:label="G_BSU36010">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101753,17 +114050,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28310">
+            <rdf:Description rdf:about="#G_BSU36010">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000399"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011766"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012000"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012782"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029035"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P37251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q04789"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -101909,7 +114207,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18260" sboTerm="SBO:0000243" fbc:id="G_BSU18260" fbc:name="G_BSU18260" fbc:label="G_BSU18260">
+      <fbc:geneProduct metaid="G_BSU24150" sboTerm="SBO:0000243" fbc:id="G_BSU24150" fbc:name="G_BSU24150" fbc:label="G_BSU24150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101917,7 +114215,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18260">
+            <rdf:Description rdf:about="#G_BSU24150">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006089"/>
@@ -101925,15 +114223,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009075"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009100"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13461"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34421"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P45857"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32820" sboTerm="SBO:0000243" fbc:id="G_BSU32820" fbc:name="G_BSU32820" fbc:label="G_BSU32820">
+      <fbc:geneProduct metaid="G_BSU18260" sboTerm="SBO:0000243" fbc:id="G_BSU18260" fbc:name="G_BSU18260" fbc:label="G_BSU18260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101941,7 +114239,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32820">
+            <rdf:Description rdf:about="#G_BSU18260">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006089"/>
@@ -101949,15 +114247,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009075"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009100"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34421"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24150" sboTerm="SBO:0000243" fbc:id="G_BSU24150" fbc:name="G_BSU24150" fbc:label="G_BSU24150">
+      <fbc:geneProduct metaid="G_BSU32820" sboTerm="SBO:0000243" fbc:id="G_BSU32820" fbc:name="G_BSU32820" fbc:label="G_BSU32820">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -101965,7 +114263,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24150">
+            <rdf:Description rdf:about="#G_BSU32820">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006089"/>
@@ -101973,8 +114271,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009075"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009100"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11321"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P45857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32176"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -102006,6 +114304,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU29290" sboTerm="SBO:0000243" fbc:id="G_BSU29290" fbc:name="G_BSU29290" fbc:label="G_BSU29290">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23910" sboTerm="SBO:0000243" fbc:id="G_BSU23910" fbc:name="G_BSU23910" fbc:label="G_BSU23910">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102049,13 +114354,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29290" sboTerm="SBO:0000243" fbc:id="G_BSU29290" fbc:name="G_BSU29290" fbc:label="G_BSU29290">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15350" sboTerm="SBO:0000243" fbc:id="G_BSU15350" fbc:name="G_BSU15350" fbc:label="G_BSU15350">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102078,6 +114376,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU07600" sboTerm="SBO:0000243" fbc:id="G_BSU07600" fbc:name="G_BSU07600" fbc:label="G_BSU07600">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU07600">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU18000" sboTerm="SBO:0000243" fbc:id="G_BSU18000" fbc:name="G_BSU18000" fbc:label="G_BSU18000">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102234,7 +114551,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31220" sboTerm="SBO:0000243" fbc:id="G_BSU31220" fbc:name="G_BSU31220" fbc:label="G_BSU31220">
+      <fbc:geneProduct metaid="G_BSU18500" sboTerm="SBO:0000243" fbc:id="G_BSU18500" fbc:name="G_BSU18500" fbc:label="G_BSU18500">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102242,20 +114559,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31220">
+            <rdf:Description rdf:about="#G_BSU18500">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P05707"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10971"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q8I2S7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/813505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2C07"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q8I2S7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/5474052"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18500" sboTerm="SBO:0000243" fbc:id="G_BSU18500" fbc:name="G_BSU18500" fbc:label="G_BSU18500">
+      <fbc:geneProduct metaid="G_BSU31220" sboTerm="SBO:0000243" fbc:id="G_BSU31220" fbc:name="G_BSU31220" fbc:label="G_BSU31220">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102263,26 +114586,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18500">
+            <rdf:Description rdf:about="#G_BSU31220">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q8I2S7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/813505"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2C07"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q8I2S7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/5474052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P05707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10971"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29700" sboTerm="SBO:0000243" fbc:id="G_BSU29700" fbc:name="G_BSU29700" fbc:label="G_BSU29700">
+      <fbc:geneProduct metaid="G_BSU08090" sboTerm="SBO:0000243" fbc:id="G_BSU08090" fbc:name="G_BSU08090" fbc:label="G_BSU08090">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102290,19 +114607,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29700">
+            <rdf:Description rdf:about="#G_BSU08090">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34324"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08060" sboTerm="SBO:0000243" fbc:id="G_BSU08060" fbc:name="G_BSU08060" fbc:label="G_BSU08060">
+      <fbc:geneProduct metaid="G_BSU31420" sboTerm="SBO:0000243" fbc:id="G_BSU31420" fbc:name="G_BSU31420" fbc:label="G_BSU31420">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102310,20 +114633,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08060">
+            <rdf:Description rdf:about="#G_BSU31420">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12558"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29690" sboTerm="SBO:0000243" fbc:id="G_BSU29690" fbc:name="G_BSU29690" fbc:label="G_BSU29690">
+      <fbc:geneProduct metaid="G_BSU08070" sboTerm="SBO:0000243" fbc:id="G_BSU08070" fbc:name="G_BSU08070" fbc:label="G_BSU08070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102331,21 +114653,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29690">
+            <rdf:Description rdf:about="#G_BSU08070">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000182"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016181"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34591"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08080" sboTerm="SBO:0000243" fbc:id="G_BSU08080" fbc:name="G_BSU08080" fbc:label="G_BSU08080">
+      <fbc:geneProduct metaid="G_BSU08060" sboTerm="SBO:0000243" fbc:id="G_BSU08060" fbc:name="G_BSU08060" fbc:label="G_BSU08060">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102353,23 +114676,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08080">
+            <rdf:Description rdf:about="#G_BSU08060">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31404"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31420" sboTerm="SBO:0000243" fbc:id="G_BSU31420" fbc:name="G_BSU31420" fbc:label="G_BSU31420">
+      <fbc:geneProduct metaid="G_BSU29710" sboTerm="SBO:0000243" fbc:id="G_BSU29710" fbc:name="G_BSU29710" fbc:label="G_BSU29710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102377,19 +114697,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31420">
+            <rdf:Description rdf:about="#G_BSU29710">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887378"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10367"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39067"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08070" sboTerm="SBO:0000243" fbc:id="G_BSU08070" fbc:name="G_BSU08070" fbc:label="G_BSU08070">
+      <fbc:geneProduct metaid="G_BSU08080" sboTerm="SBO:0000243" fbc:id="G_BSU08080" fbc:name="G_BSU08080" fbc:label="G_BSU08080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102397,22 +114719,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08070">
+            <rdf:Description rdf:about="#G_BSU08080">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005476"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31550"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08090" sboTerm="SBO:0000243" fbc:id="G_BSU08090" fbc:name="G_BSU08090" fbc:label="G_BSU08090">
+      <fbc:geneProduct metaid="G_BSU29690" sboTerm="SBO:0000243" fbc:id="G_BSU29690" fbc:name="G_BSU29690" fbc:label="G_BSU29690">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102420,25 +114743,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08090">
+            <rdf:Description rdf:about="#G_BSU29690">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006258"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012999"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12561"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34324"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39065"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29710" sboTerm="SBO:0000243" fbc:id="G_BSU29710" fbc:name="G_BSU29710" fbc:label="G_BSU29710">
+      <fbc:geneProduct metaid="G_BSU29700" sboTerm="SBO:0000243" fbc:id="G_BSU29700" fbc:name="G_BSU29700" fbc:label="G_BSU29700">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102446,14 +114765,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29710">
+            <rdf:Description rdf:about="#G_BSU29700">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000286"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003085"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023801"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10367"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39066"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -102483,7 +114800,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30450" sboTerm="SBO:0000243" fbc:id="G_BSU30450" fbc:name="G_BSU30450" fbc:label="G_BSU30450">
+      <fbc:geneProduct metaid="G_BSU14360" sboTerm="SBO:0000243" fbc:id="G_BSU14360" fbc:name="G_BSU14360" fbc:label="G_BSU14360">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102491,14 +114808,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30450">
+            <rdf:Description rdf:about="#G_BSU14360">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187Q7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187Q7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -102548,7 +114868,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30430" sboTerm="SBO:0000243" fbc:id="G_BSU30430" fbc:name="G_BSU30430" fbc:label="G_BSU30430">
+      <fbc:geneProduct metaid="G_BSU30450" sboTerm="SBO:0000243" fbc:id="G_BSU30450" fbc:name="G_BSU30450" fbc:label="G_BSU30450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102556,19 +114876,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30430">
+            <rdf:Description rdf:about="#G_BSU30450">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13914"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34641"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14360" sboTerm="SBO:0000243" fbc:id="G_BSU14360" fbc:name="G_BSU14360" fbc:label="G_BSU14360">
+      <fbc:geneProduct metaid="G_BSU30430" sboTerm="SBO:0000243" fbc:id="G_BSU30430" fbc:name="G_BSU30430" fbc:label="G_BSU30430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102576,17 +114898,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14360">
+            <rdf:Description rdf:about="#G_BSU30430">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187Q7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187Q7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34953"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -102740,6 +115057,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU06560" sboTerm="SBO:0000243" fbc:id="G_BSU06560" fbc:name="G_BSU06560" fbc:label="G_BSU06560">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU14520" sboTerm="SBO:0000243" fbc:id="G_BSU14520" fbc:name="G_BSU14520" fbc:label="G_BSU14520">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102763,13 +115087,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06560" sboTerm="SBO:0000243" fbc:id="G_BSU06560" fbc:name="G_BSU06560" fbc:label="G_BSU06560">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU01370" sboTerm="SBO:0000243" fbc:id="G_BSU01370" fbc:name="G_BSU01370" fbc:label="G_BSU01370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102829,7 +115146,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33080" sboTerm="SBO:0000243" fbc:id="G_BSU33080" fbc:name="G_BSU33080" fbc:label="G_BSU33080">
+      <fbc:geneProduct metaid="G_BSU13950" sboTerm="SBO:0000243" fbc:id="G_BSU13950" fbc:name="G_BSU13950" fbc:label="G_BSU13950">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102837,24 +115154,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33080">
+            <rdf:Description rdf:about="#G_BSU13950">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885891"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11580" sboTerm="SBO:0000243" fbc:id="G_BSU11580" fbc:name="G_BSU11580" fbc:label="G_BSU11580">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13950" sboTerm="SBO:0000243" fbc:id="G_BSU13950" fbc:name="G_BSU13950" fbc:label="G_BSU13950">
+      <fbc:geneProduct metaid="G_BSU33080" sboTerm="SBO:0000243" fbc:id="G_BSU33080" fbc:name="G_BSU33080" fbc:label="G_BSU33080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -102862,16 +115172,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU13950">
+            <rdf:Description rdf:about="#G_BSU33080">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886030"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU11580" sboTerm="SBO:0000243" fbc:id="G_BSU11580" fbc:name="G_BSU11580" fbc:label="G_BSU11580">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38710" sboTerm="SBO:0000243" fbc:id="G_BSU38710" fbc:name="G_BSU38710" fbc:label="G_BSU38710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103339,30 +115656,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU19370" sboTerm="SBO:0000243" fbc:id="G_BSU19370" fbc:name="G_BSU19370" fbc:label="G_BSU19370">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU19370">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P23129"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU14610" sboTerm="SBO:0000243" fbc:id="G_BSU14610" fbc:name="G_BSU14610" fbc:label="G_BSU14610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103389,7 +115682,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU19360" sboTerm="SBO:0000243" fbc:id="G_BSU19360" fbc:name="G_BSU19360" fbc:label="G_BSU19360">
+      <fbc:geneProduct metaid="G_BSU19370" sboTerm="SBO:0000243" fbc:id="G_BSU19370" fbc:name="G_BSU19370" fbc:label="G_BSU19370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103397,25 +115690,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU19360">
+            <rdf:Description rdf:about="#G_BSU19370">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10273"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P16263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P23129"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU07570" sboTerm="SBO:0000243" fbc:id="G_BSU07570" fbc:name="G_BSU07570" fbc:label="G_BSU07570">
+      <fbc:geneProduct metaid="G_BSU19360" sboTerm="SBO:0000243" fbc:id="G_BSU19360" fbc:name="G_BSU19360" fbc:label="G_BSU19360">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103423,12 +115714,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU07570">
+            <rdf:Description rdf:about="#G_BSU19360">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12951"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P16263"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -103458,7 +115755,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05740" sboTerm="SBO:0000243" fbc:id="G_BSU05740" fbc:name="G_BSU05740" fbc:label="G_BSU05740">
+      <fbc:geneProduct metaid="G_BSU07570" sboTerm="SBO:0000243" fbc:id="G_BSU07570" fbc:name="G_BSU07570" fbc:label="G_BSU07570">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103466,15 +115763,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05740">
+            <rdf:Description rdf:about="#G_BSU07570">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018299"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10697"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P19405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34726"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -103511,7 +115805,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11370" sboTerm="SBO:0000243" fbc:id="G_BSU11370" fbc:name="G_BSU11370" fbc:label="G_BSU11370">
+      <fbc:geneProduct metaid="G_BSU05740" sboTerm="SBO:0000243" fbc:id="G_BSU05740" fbc:name="G_BSU05740" fbc:label="G_BSU05740">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103519,18 +115813,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11370">
+            <rdf:Description rdf:about="#G_BSU05740">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896881"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897776"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897787"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WA21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P19405"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -103564,6 +115855,32 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU11370" sboTerm="SBO:0000243" fbc:id="G_BSU11370" fbc:name="G_BSU11370" fbc:label="G_BSU11370">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU11370">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897776"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WA21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176836"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU04560" sboTerm="SBO:0000243" fbc:id="G_BSU04560" fbc:name="G_BSU04560" fbc:label="G_BSU04560">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103622,6 +115939,27 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU15380" sboTerm="SBO:0000243" fbc:id="G_BSU15380" fbc:name="G_BSU15380" fbc:label="G_BSU15380">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU15380">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182V8"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU04640" sboTerm="SBO:0000243" fbc:id="G_BSU04640" fbc:name="G_BSU04640" fbc:label="G_BSU04640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103670,27 +116008,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15380" sboTerm="SBO:0000243" fbc:id="G_BSU15380" fbc:name="G_BSU15380" fbc:label="G_BSU15380">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15380">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182V8"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU17640" sboTerm="SBO:0000243" fbc:id="G_BSU17640" fbc:name="G_BSU17640" fbc:label="G_BSU17640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103729,7 +116046,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31570" sboTerm="SBO:0000243" fbc:id="G_BSU31570" fbc:name="G_BSU31570" fbc:label="G_BSU31570">
+      <fbc:geneProduct metaid="G_BSU39480" sboTerm="SBO:0000243" fbc:id="G_BSU39480" fbc:name="G_BSU39480" fbc:label="G_BSU39480">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103737,11 +116054,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31570">
+            <rdf:Description rdf:about="#G_BSU39480">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896939"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185W1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185W1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -103786,7 +116107,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39480" sboTerm="SBO:0000243" fbc:id="G_BSU39480" fbc:name="G_BSU39480" fbc:label="G_BSU39480">
+      <fbc:geneProduct metaid="G_BSU31570" sboTerm="SBO:0000243" fbc:id="G_BSU31570" fbc:name="G_BSU31570" fbc:label="G_BSU31570">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103794,15 +116115,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39480">
+            <rdf:Description rdf:about="#G_BSU31570">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185W1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185W1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896939"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898627"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -103831,7 +116148,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02420" sboTerm="SBO:0000243" fbc:id="G_BSU02420" fbc:name="G_BSU02420" fbc:label="G_BSU02420">
+      <fbc:geneProduct metaid="G_BSU18120" sboTerm="SBO:0000243" fbc:id="G_BSU18120" fbc:name="G_BSU18120" fbc:label="G_BSU18120">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103839,19 +116156,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02420">
+            <rdf:Description rdf:about="#G_BSU18120">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q45068"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18120" sboTerm="SBO:0000243" fbc:id="G_BSU18120" fbc:name="G_BSU18120" fbc:label="G_BSU18120">
+      <fbc:geneProduct metaid="G_BSU27810" sboTerm="SBO:0000243" fbc:id="G_BSU27810" fbc:name="G_BSU27810" fbc:label="G_BSU27810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103859,19 +116176,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18120">
+            <rdf:Description rdf:about="#G_BSU27810">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q45068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32060"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU07750" sboTerm="SBO:0000243" fbc:id="G_BSU07750" fbc:name="G_BSU07750" fbc:label="G_BSU07750">
+      <fbc:geneProduct metaid="G_BSU02420" sboTerm="SBO:0000243" fbc:id="G_BSU02420" fbc:name="G_BSU02420" fbc:label="G_BSU02420">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103879,23 +116196,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU07750">
+            <rdf:Description rdf:about="#G_BSU02420">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q186Q3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q186Q3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185E7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185E7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31464"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27810" sboTerm="SBO:0000243" fbc:id="G_BSU27810" fbc:name="G_BSU27810" fbc:label="G_BSU27810">
+      <fbc:geneProduct metaid="G_BSU07750" sboTerm="SBO:0000243" fbc:id="G_BSU07750" fbc:name="G_BSU07750" fbc:label="G_BSU07750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103903,12 +116216,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27810">
+            <rdf:Description rdf:about="#G_BSU07750">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q186Q3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q186Q3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185E7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185E7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899471"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -103971,7 +116288,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09530" sboTerm="SBO:0000243" fbc:id="G_BSU09530" fbc:name="G_BSU09530" fbc:label="G_BSU09530">
+      <fbc:geneProduct metaid="G_BSU39780" sboTerm="SBO:0000243" fbc:id="G_BSU39780" fbc:name="G_BSU39780" fbc:label="G_BSU39780">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -103979,23 +116296,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU09530">
+            <rdf:Description rdf:about="#G_BSU39780">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001395"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018170"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020471"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1PZ1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P80874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1PYF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1PZ0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46336"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39780" sboTerm="SBO:0000243" fbc:id="G_BSU39780" fbc:name="G_BSU39780" fbc:label="G_BSU39780">
+      <fbc:geneProduct metaid="G_BSU09530" sboTerm="SBO:0000243" fbc:id="G_BSU09530" fbc:name="G_BSU09530" fbc:label="G_BSU09530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104003,17 +116321,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39780">
+            <rdf:Description rdf:about="#G_BSU09530">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001395"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018170"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020471"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11363"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1PYF"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1PZ0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1PZ1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P80874"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -104097,7 +116414,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32980" sboTerm="SBO:0000243" fbc:id="G_BSU32980" fbc:name="G_BSU32980" fbc:label="G_BSU32980">
+      <fbc:geneProduct metaid="G_BSU10430" sboTerm="SBO:0000243" fbc:id="G_BSU10430" fbc:name="G_BSU10430" fbc:label="G_BSU10430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104105,29 +116422,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32980">
+            <rdf:Description rdf:about="#G_BSU10430">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100750866"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100772460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100773401"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFP4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945337"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/107605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS24250.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/15485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS25445.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/235033"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS22884.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG84"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11292"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10430" sboTerm="SBO:0000243" fbc:id="G_BSU10430" fbc:name="G_BSU10430" fbc:label="G_BSU10430">
+      <fbc:geneProduct metaid="G_BSU32980" sboTerm="SBO:0000243" fbc:id="G_BSU32980" fbc:name="G_BSU32980" fbc:label="G_BSU32980">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104135,13 +116443,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU10430">
+            <rdf:Description rdf:about="#G_BSU32980">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009859"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG84"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947478"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100750866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100772460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100773401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFP4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/107605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS24250.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/15485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS25445.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/235033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS22884.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -104197,27 +116514,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU04090" sboTerm="SBO:0000243" fbc:id="G_BSU04090" fbc:name="G_BSU04090" fbc:label="G_BSU04090">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU04090">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003778"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ7"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU04080" sboTerm="SBO:0000243" fbc:id="G_BSU04080" fbc:name="G_BSU04080" fbc:label="G_BSU04080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104241,7 +116537,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14060" sboTerm="SBO:0000243" fbc:id="G_BSU14060" fbc:name="G_BSU14060" fbc:label="G_BSU14060">
+      <fbc:geneProduct metaid="G_BSU04090" sboTerm="SBO:0000243" fbc:id="G_BSU04090" fbc:name="G_BSU04090" fbc:label="G_BSU04090">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104249,10 +116545,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14060">
+            <rdf:Description rdf:about="#G_BSU04090">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100753128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ7"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -104266,6 +116565,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU40000" sboTerm="SBO:0000243" fbc:id="G_BSU40000" fbc:name="G_BSU40000" fbc:label="G_BSU40000">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU26850" sboTerm="SBO:0000243" fbc:id="G_BSU26850" fbc:name="G_BSU26850" fbc:label="G_BSU26850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104273,12 +116579,23 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU40000" sboTerm="SBO:0000243" fbc:id="G_BSU40000" fbc:name="G_BSU40000" fbc:label="G_BSU40000">
+      <fbc:geneProduct metaid="G_BSU14060" sboTerm="SBO:0000243" fbc:id="G_BSU14060" fbc:name="G_BSU14060" fbc:label="G_BSU14060">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU14060">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100753128"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU12390" sboTerm="SBO:0000243" fbc:id="G_BSU12390" fbc:name="G_BSU12390" fbc:label="G_BSU12390">
         <notes>
@@ -104376,6 +116693,20 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU13570" sboTerm="SBO:0000243" fbc:id="G_BSU13570" fbc:name="G_BSU13570" fbc:label="G_BSU13570">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU19600" sboTerm="SBO:0000243" fbc:id="G_BSU19600" fbc:name="G_BSU19600" fbc:label="G_BSU19600">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03160" sboTerm="SBO:0000243" fbc:id="G_BSU03160" fbc:name="G_BSU03160" fbc:label="G_BSU03160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104403,6 +116734,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU04180" sboTerm="SBO:0000243" fbc:id="G_BSU04180" fbc:name="G_BSU04180" fbc:label="G_BSU04180">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU31800" sboTerm="SBO:0000243" fbc:id="G_BSU31800" fbc:name="G_BSU31800" fbc:label="G_BSU31800">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104575,6 +116913,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU02570" sboTerm="SBO:0000243" fbc:id="G_BSU02570" fbc:name="G_BSU02570" fbc:label="G_BSU02570">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU02570">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042237"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23280" sboTerm="SBO:0000243" fbc:id="G_BSU23280" fbc:name="G_BSU23280" fbc:label="G_BSU23280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104770,7 +117131,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28750" sboTerm="SBO:0000243" fbc:id="G_BSU28750" fbc:name="G_BSU28750" fbc:label="G_BSU28750">
+      <fbc:geneProduct metaid="G_BSU28730" sboTerm="SBO:0000243" fbc:id="G_BSU28730" fbc:name="G_BSU28730" fbc:label="G_BSU28730">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104778,19 +117139,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28750">
+            <rdf:Description rdf:about="#G_BSU28730">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94530"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28730" sboTerm="SBO:0000243" fbc:id="G_BSU28730" fbc:name="G_BSU28730" fbc:label="G_BSU28730">
+      <fbc:geneProduct metaid="G_BSU28750" sboTerm="SBO:0000243" fbc:id="G_BSU28750" fbc:name="G_BSU28750" fbc:label="G_BSU28750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104798,12 +117159,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28730">
+            <rdf:Description rdf:about="#G_BSU28750">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94528"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -104834,7 +117195,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05800" sboTerm="SBO:0000243" fbc:id="G_BSU05800" fbc:name="G_BSU05800" fbc:label="G_BSU05800">
+      <fbc:geneProduct metaid="G_BSU29040" sboTerm="SBO:0000243" fbc:id="G_BSU29040" fbc:name="G_BSU29040" fbc:label="G_BSU29040">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104842,18 +117203,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05800">
+            <rdf:Description rdf:about="#G_BSU29040">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11636"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29040" sboTerm="SBO:0000243" fbc:id="G_BSU29040" fbc:name="G_BSU29040" fbc:label="G_BSU29040">
+      <fbc:geneProduct metaid="G_BSU05800" sboTerm="SBO:0000243" fbc:id="G_BSU05800" fbc:name="G_BSU05800" fbc:label="G_BSU05800">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104861,15 +117226,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29040">
+            <rdf:Description rdf:about="#G_BSU05800">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31122"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947218"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -104979,7 +117340,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23960" sboTerm="SBO:0000243" fbc:id="G_BSU23960" fbc:name="G_BSU23960" fbc:label="G_BSU23960">
+      <fbc:geneProduct metaid="G_BSU23970" sboTerm="SBO:0000243" fbc:id="G_BSU23970" fbc:name="G_BSU23970" fbc:label="G_BSU23970">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -104987,15 +117348,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23960">
+            <rdf:Description rdf:about="#G_BSU23970">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54536"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -105023,7 +117382,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23970" sboTerm="SBO:0000243" fbc:id="G_BSU23970" fbc:name="G_BSU23970" fbc:label="G_BSU23970">
+      <fbc:geneProduct metaid="G_BSU23960" sboTerm="SBO:0000243" fbc:id="G_BSU23960" fbc:name="G_BSU23960" fbc:label="G_BSU23960">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105031,20 +117390,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23970">
+            <rdf:Description rdf:about="#G_BSU23960">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11728"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54537"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02570" sboTerm="SBO:0000243" fbc:id="G_BSU02570" fbc:name="G_BSU02570" fbc:label="G_BSU02570">
+      <fbc:geneProduct metaid="G_BSU39490" sboTerm="SBO:0000243" fbc:id="G_BSU39490" fbc:name="G_BSU39490" fbc:label="G_BSU39490">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU03110" sboTerm="SBO:0000243" fbc:id="G_BSU03110" fbc:name="G_BSU03110" fbc:label="G_BSU03110">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105052,22 +117420,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02570">
+            <rdf:Description rdf:about="#G_BSU03110">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044745"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044745"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042237"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAE2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13609"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33330" sboTerm="SBO:0000243" fbc:id="G_BSU33330" fbc:name="G_BSU33330" fbc:label="G_BSU33330">
+      <fbc:geneProduct metaid="G_BSU09460" sboTerm="SBO:0000243" fbc:id="G_BSU09460" fbc:name="G_BSU09460" fbc:label="G_BSU09460">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU40330" sboTerm="SBO:0000243" fbc:id="G_BSU40330" fbc:name="G_BSU40330" fbc:label="G_BSU40330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105075,12 +117450,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33330">
+            <rdf:Description rdf:about="#G_BSU40330">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002293"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14154"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39137"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -105109,7 +117486,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU40330" sboTerm="SBO:0000243" fbc:id="G_BSU40330" fbc:name="G_BSU40330" fbc:label="G_BSU40330">
+      <fbc:geneProduct metaid="G_BSU33330" sboTerm="SBO:0000243" fbc:id="G_BSU33330" fbc:name="G_BSU33330" fbc:label="G_BSU33330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105117,27 +117494,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU40330">
+            <rdf:Description rdf:about="#G_BSU33330">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002293"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004840"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004841"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10933"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32204"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09460" sboTerm="SBO:0000243" fbc:id="G_BSU09460" fbc:name="G_BSU09460" fbc:label="G_BSU09460">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU16750" sboTerm="SBO:0000243" fbc:id="G_BSU16750" fbc:name="G_BSU16750" fbc:label="G_BSU16750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105163,13 +117531,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02690" sboTerm="SBO:0000243" fbc:id="G_BSU02690" fbc:name="G_BSU02690" fbc:label="G_BSU02690">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23580" sboTerm="SBO:0000243" fbc:id="G_BSU23580" fbc:name="G_BSU23580" fbc:label="G_BSU23580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105195,7 +117556,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30540" sboTerm="SBO:0000243" fbc:id="G_BSU30540" fbc:name="G_BSU30540" fbc:label="G_BSU30540">
+      <fbc:geneProduct metaid="G_BSU02690" sboTerm="SBO:0000243" fbc:id="G_BSU02690" fbc:name="G_BSU02690" fbc:label="G_BSU02690">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU39920" sboTerm="SBO:0000243" fbc:id="G_BSU39920" fbc:name="G_BSU39920" fbc:label="G_BSU39920">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105203,7 +117571,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30540">
+            <rdf:Description rdf:about="#G_BSU39920">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000583"/>
@@ -105212,8 +117580,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017932"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11831"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42113"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -105245,7 +117613,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39920" sboTerm="SBO:0000243" fbc:id="G_BSU39920" fbc:name="G_BSU39920" fbc:label="G_BSU39920">
+      <fbc:geneProduct metaid="G_BSU30540" sboTerm="SBO:0000243" fbc:id="G_BSU30540" fbc:name="G_BSU30540" fbc:label="G_BSU30540">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105253,7 +117621,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39920">
+            <rdf:Description rdf:about="#G_BSU30540">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000583"/>
@@ -105262,8 +117630,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017932"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11116"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54420"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -105460,7 +117828,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU22370" sboTerm="SBO:0000243" fbc:id="G_BSU22370" fbc:name="G_BSU22370" fbc:label="G_BSU22370">
+      <fbc:geneProduct metaid="G_BSU09570" sboTerm="SBO:0000243" fbc:id="G_BSU09570" fbc:name="G_BSU09570" fbc:label="G_BSU09570">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105468,7 +117836,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU22370">
+            <rdf:Description rdf:about="#G_BSU09570">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004838"/>
@@ -105476,15 +117844,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015421"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015422"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015424"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11513"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P53001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183R4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183R4"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09570" sboTerm="SBO:0000243" fbc:id="G_BSU09570" fbc:name="G_BSU09570" fbc:label="G_BSU09570">
+      <fbc:geneProduct metaid="G_BSU22370" sboTerm="SBO:0000243" fbc:id="G_BSU22370" fbc:name="G_BSU22370" fbc:label="G_BSU22370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105492,7 +117860,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU09570">
+            <rdf:Description rdf:about="#G_BSU22370">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004838"/>
@@ -105500,8 +117868,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015421"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015422"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015424"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183R4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183R4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11513"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P53001"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -105547,6 +117915,59 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU32810" sboTerm="SBO:0000243" fbc:id="G_BSU32810" fbc:name="G_BSU32810" fbc:label="G_BSU32810">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU32810">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB96"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12237"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU24770" sboTerm="SBO:0000243" fbc:id="G_BSU24770" fbc:name="G_BSU24770" fbc:label="G_BSU24770">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU24770">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCJ8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175891"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU25780" sboTerm="SBO:0000243" fbc:id="G_BSU25780" fbc:name="G_BSU25780" fbc:label="G_BSU25780">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU34920" sboTerm="SBO:0000243" fbc:id="G_BSU34920" fbc:name="G_BSU34920" fbc:label="G_BSU34920">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105571,6 +117992,58 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU30610" sboTerm="SBO:0000243" fbc:id="G_BSU30610" fbc:name="G_BSU30610" fbc:label="G_BSU30610">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU30610">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187T8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187T8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185N2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185N2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181C6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181C6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181C9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181C9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13299"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38970" sboTerm="SBO:0000243" fbc:id="G_BSU38970" fbc:name="G_BSU38970" fbc:label="G_BSU38970">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105621,29 +118094,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05840" sboTerm="SBO:0000243" fbc:id="G_BSU05840" fbc:name="G_BSU05840" fbc:label="G_BSU05840">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05840">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001360"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013781"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017853"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018120"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18A15"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18A15"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03410" sboTerm="SBO:0000243" fbc:id="G_BSU03410" fbc:name="G_BSU03410" fbc:label="G_BSU03410">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105741,7 +118191,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01460" sboTerm="SBO:0000243" fbc:id="G_BSU01460" fbc:name="G_BSU01460" fbc:label="G_BSU01460">
+      <fbc:geneProduct metaid="G_BSU10370" sboTerm="SBO:0000243" fbc:id="G_BSU10370" fbc:name="G_BSU10370" fbc:label="G_BSU10370">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU01470" sboTerm="SBO:0000243" fbc:id="G_BSU01470" fbc:name="G_BSU01470" fbc:label="G_BSU01470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105749,29 +118206,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01460">
+            <rdf:Description rdf:about="#G_BSU01470">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015856"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CI9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CJ3"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10370" sboTerm="SBO:0000243" fbc:id="G_BSU10370" fbc:name="G_BSU10370" fbc:label="G_BSU10370">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01470" sboTerm="SBO:0000243" fbc:id="G_BSU01470" fbc:name="G_BSU01470" fbc:label="G_BSU01470">
+      <fbc:geneProduct metaid="G_BSU01460" sboTerm="SBO:0000243" fbc:id="G_BSU01460" fbc:name="G_BSU01460" fbc:label="G_BSU01460">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105779,13 +118227,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01470">
+            <rdf:Description rdf:about="#G_BSU01460">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CJ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CI9"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -105889,7 +118339,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08830" sboTerm="SBO:0000243" fbc:id="G_BSU08830" fbc:name="G_BSU08830" fbc:label="G_BSU08830">
+      <fbc:geneProduct metaid="G_BSU08850" sboTerm="SBO:0000243" fbc:id="G_BSU08850" fbc:name="G_BSU08850" fbc:label="G_BSU08850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105897,23 +118347,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08830">
+            <rdf:Description rdf:about="#G_BSU08850">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12232"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P97027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P40401"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08850" sboTerm="SBO:0000243" fbc:id="G_BSU08850" fbc:name="G_BSU08850" fbc:label="G_BSU08850">
+      <fbc:geneProduct metaid="G_BSU08830" sboTerm="SBO:0000243" fbc:id="G_BSU08830" fbc:name="G_BSU08830" fbc:label="G_BSU08830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -105921,12 +118367,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08850">
+            <rdf:Description rdf:about="#G_BSU08830">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10657"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P40401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P97027"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106003,7 +118453,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39050" sboTerm="SBO:0000243" fbc:id="G_BSU39050" fbc:name="G_BSU39050" fbc:label="G_BSU39050">
+      <fbc:geneProduct metaid="G_BSU08820" sboTerm="SBO:0000243" fbc:id="G_BSU08820" fbc:name="G_BSU08820" fbc:label="G_BSU08820">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106011,7 +118461,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39050">
+            <rdf:Description rdf:about="#G_BSU08820">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002226"/>
@@ -106020,16 +118470,22 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018028"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020835"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024708"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024712"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11102"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P26901"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU12490" sboTerm="SBO:0000243" fbc:id="G_BSU12490" fbc:name="G_BSU12490" fbc:label="G_BSU12490">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38630" sboTerm="SBO:0000243" fbc:id="G_BSU38630" fbc:name="G_BSU38630" fbc:label="G_BSU38630">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106056,14 +118512,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU12490" sboTerm="SBO:0000243" fbc:id="G_BSU12490" fbc:name="G_BSU12490" fbc:label="G_BSU12490">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08820" sboTerm="SBO:0000243" fbc:id="G_BSU08820" fbc:name="G_BSU08820" fbc:label="G_BSU08820">
+      <fbc:geneProduct metaid="G_BSU39050" sboTerm="SBO:0000243" fbc:id="G_BSU39050" fbc:name="G_BSU39050" fbc:label="G_BSU39050">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106071,7 +118520,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08820">
+            <rdf:Description rdf:about="#G_BSU39050">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002226"/>
@@ -106080,9 +118529,10 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018028"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020835"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024708"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024711"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P26901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024712"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42234"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106113,7 +118563,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11240" sboTerm="SBO:0000243" fbc:id="G_BSU11240" fbc:name="G_BSU11240" fbc:label="G_BSU11240">
+      <fbc:geneProduct metaid="G_BSU15510" sboTerm="SBO:0000243" fbc:id="G_BSU15510" fbc:name="G_BSU15510" fbc:label="G_BSU15510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106121,27 +118571,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11240">
+            <rdf:Description rdf:about="#G_BSU15510">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005479"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005480"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006275"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013816"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P18185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P25993"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15510" sboTerm="SBO:0000243" fbc:id="G_BSU15510" fbc:name="G_BSU15510" fbc:label="G_BSU15510">
+      <fbc:geneProduct metaid="G_BSU11230" sboTerm="SBO:0000243" fbc:id="G_BSU11230" fbc:name="G_BSU11230" fbc:label="G_BSU11230">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106149,22 +118594,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15510">
+            <rdf:Description rdf:about="#G_BSU11230">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002474"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006274"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017926"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P25993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10195"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36838"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11230" sboTerm="SBO:0000243" fbc:id="G_BSU11230" fbc:name="G_BSU11230" fbc:label="G_BSU11230">
+      <fbc:geneProduct metaid="G_BSU11240" sboTerm="SBO:0000243" fbc:id="G_BSU11240" fbc:name="G_BSU11240" fbc:label="G_BSU11240">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106172,15 +118617,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11230">
+            <rdf:Description rdf:about="#G_BSU11240">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10195"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P18185"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106290,13 +118740,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06710" sboTerm="SBO:0000243" fbc:id="G_BSU06710" fbc:name="G_BSU06710" fbc:label="G_BSU06710">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU05470" sboTerm="SBO:0000243" fbc:id="G_BSU05470" fbc:name="G_BSU05470" fbc:label="G_BSU05470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106319,7 +118762,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24100" sboTerm="SBO:0000243" fbc:id="G_BSU24100" fbc:name="G_BSU24100" fbc:label="G_BSU24100">
+      <fbc:geneProduct metaid="G_BSU06710" sboTerm="SBO:0000243" fbc:id="G_BSU06710" fbc:name="G_BSU06710" fbc:label="G_BSU06710">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU14090" sboTerm="SBO:0000243" fbc:id="G_BSU14090" fbc:name="G_BSU14090" fbc:label="G_BSU14090">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106327,62 +118777,60 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24100">
+            <rdf:Description rdf:about="#G_BSU14090">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11236"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37130" sboTerm="SBO:0000243" fbc:id="G_BSU37130" fbc:name="G_BSU37130" fbc:label="G_BSU37130">
+      <fbc:geneProduct metaid="G_BSU13420" sboTerm="SBO:0000243" fbc:id="G_BSU13420" fbc:name="G_BSU13420" fbc:label="G_BSU13420">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU13420">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31740" sboTerm="SBO:0000243" fbc:id="G_BSU31740" fbc:name="G_BSU31740" fbc:label="G_BSU31740">
+      <fbc:geneProduct metaid="G_BSU37130" sboTerm="SBO:0000243" fbc:id="G_BSU37130" fbc:name="G_BSU37130" fbc:label="G_BSU37130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33221" sboTerm="SBO:0000243" fbc:id="G_BSU33221" fbc:name="G_BSU33221" fbc:label="G_BSU33221">
+      <fbc:geneProduct metaid="G_BSU09330" sboTerm="SBO:0000243" fbc:id="G_BSU09330" fbc:name="G_BSU09330" fbc:label="G_BSU09330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14090" sboTerm="SBO:0000243" fbc:id="G_BSU14090" fbc:name="G_BSU14090" fbc:label="G_BSU14090">
+      <fbc:geneProduct metaid="G_BSU31740" sboTerm="SBO:0000243" fbc:id="G_BSU31740" fbc:name="G_BSU31740" fbc:label="G_BSU31740">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14090">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21514"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11236"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13420" sboTerm="SBO:0000243" fbc:id="G_BSU13420" fbc:name="G_BSU13420" fbc:label="G_BSU13420">
+      <fbc:geneProduct metaid="G_BSU24100" sboTerm="SBO:0000243" fbc:id="G_BSU24100" fbc:name="G_BSU24100" fbc:label="G_BSU24100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106390,18 +118838,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU13420">
+            <rdf:Description rdf:about="#G_BSU24100">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13792"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09330" sboTerm="SBO:0000243" fbc:id="G_BSU09330" fbc:name="G_BSU09330" fbc:label="G_BSU09330">
+      <fbc:geneProduct metaid="G_BSU33221" sboTerm="SBO:0000243" fbc:id="G_BSU33221" fbc:name="G_BSU33221" fbc:label="G_BSU33221">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106432,7 +118882,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38590" sboTerm="SBO:0000243" fbc:id="G_BSU38590" fbc:name="G_BSU38590" fbc:label="G_BSU38590">
+      <fbc:geneProduct metaid="G_BSU38390" sboTerm="SBO:0000243" fbc:id="G_BSU38390" fbc:name="G_BSU38390" fbc:label="G_BSU38390">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106440,13 +118890,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38590">
+            <rdf:Description rdf:about="#G_BSU38390">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39584"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106475,7 +118926,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05810" sboTerm="SBO:0000243" fbc:id="G_BSU05810" fbc:name="G_BSU05810" fbc:label="G_BSU05810">
+      <fbc:geneProduct metaid="G_BSU05820" sboTerm="SBO:0000243" fbc:id="G_BSU05820" fbc:name="G_BSU05820" fbc:label="G_BSU05820">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106483,20 +118934,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05810">
+            <rdf:Description rdf:about="#G_BSU05820">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05506"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38390" sboTerm="SBO:0000243" fbc:id="G_BSU38390" fbc:name="G_BSU38390" fbc:label="G_BSU38390">
+      <fbc:geneProduct metaid="G_BSU38570" sboTerm="SBO:0000243" fbc:id="G_BSU38570" fbc:name="G_BSU38570" fbc:label="G_BSU38570">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106504,21 +118954,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38390">
+            <rdf:Description rdf:about="#G_BSU38570">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10562"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46319"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05820" sboTerm="SBO:0000243" fbc:id="G_BSU05820" fbc:name="G_BSU05820" fbc:label="G_BSU05820">
+      <fbc:geneProduct metaid="G_BSU38580" sboTerm="SBO:0000243" fbc:id="G_BSU38580" fbc:name="G_BSU38580" fbc:label="G_BSU38580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106526,19 +118974,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05820">
+            <rdf:Description rdf:about="#G_BSU38580">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12191"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05506"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46317"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38580" sboTerm="SBO:0000243" fbc:id="G_BSU38580" fbc:name="G_BSU38580" fbc:label="G_BSU38580">
+      <fbc:geneProduct metaid="G_BSU38590" sboTerm="SBO:0000243" fbc:id="G_BSU38590" fbc:name="G_BSU38590" fbc:label="G_BSU38590">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106546,21 +118996,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38580">
+            <rdf:Description rdf:about="#G_BSU38590">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46318"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38570" sboTerm="SBO:0000243" fbc:id="G_BSU38570" fbc:name="G_BSU38570" fbc:label="G_BSU38570">
+      <fbc:geneProduct metaid="G_BSU05810" sboTerm="SBO:0000243" fbc:id="G_BSU05810" fbc:name="G_BSU05810" fbc:label="G_BSU05810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106568,12 +119017,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38570">
+            <rdf:Description rdf:about="#G_BSU05810">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05505"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106640,7 +119090,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33730" sboTerm="SBO:0000243" fbc:id="G_BSU33730" fbc:name="G_BSU33730" fbc:label="G_BSU33730">
+      <fbc:geneProduct metaid="G_BSU40620" sboTerm="SBO:0000243" fbc:id="G_BSU40620" fbc:name="G_BSU40620" fbc:label="G_BSU40620">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106648,25 +119098,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33730">
+            <rdf:Description rdf:about="#G_BSU40620">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005892"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q45460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q17ZV9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q17ZV9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHG6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174174"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33820" sboTerm="SBO:0000243" fbc:id="G_BSU33820" fbc:name="G_BSU33820" fbc:label="G_BSU33820">
+      <fbc:geneProduct metaid="G_BSU33810" sboTerm="SBO:0000243" fbc:id="G_BSU33810" fbc:name="G_BSU33810" fbc:label="G_BSU33810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106674,12 +119128,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33820">
+            <rdf:Description rdf:about="#G_BSU33810">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPQ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPR"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32243"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU33700" sboTerm="SBO:0000243" fbc:id="G_BSU33700" fbc:name="G_BSU33700" fbc:label="G_BSU33700">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU33700">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39775"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106707,32 +119186,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33810" sboTerm="SBO:0000243" fbc:id="G_BSU33810" fbc:name="G_BSU33810" fbc:label="G_BSU33810">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33810">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12639"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPO"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPQ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3PPR"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32243"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33830" sboTerm="SBO:0000243" fbc:id="G_BSU33830" fbc:name="G_BSU33830" fbc:label="G_BSU33830">
+      <fbc:geneProduct metaid="G_BSU33730" sboTerm="SBO:0000243" fbc:id="G_BSU33730" fbc:name="G_BSU33730" fbc:label="G_BSU33730">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106740,7 +119194,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33830">
+            <rdf:Description rdf:about="#G_BSU33730">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
@@ -106750,15 +119204,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12637"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q45460"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU40620" sboTerm="SBO:0000243" fbc:id="G_BSU40620" fbc:name="G_BSU40620" fbc:label="G_BSU40620">
+      <fbc:geneProduct metaid="G_BSU33830" sboTerm="SBO:0000243" fbc:id="G_BSU33830" fbc:name="G_BSU33830" fbc:label="G_BSU33830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106766,29 +119220,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU40620">
+            <rdf:Description rdf:about="#G_BSU33830">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q17ZV9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q17ZV9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005893"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHG6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12637"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34992"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33700" sboTerm="SBO:0000243" fbc:id="G_BSU33700" fbc:name="G_BSU33700" fbc:label="G_BSU33700">
+      <fbc:geneProduct metaid="G_BSU33820" sboTerm="SBO:0000243" fbc:id="G_BSU33820" fbc:name="G_BSU33820" fbc:label="G_BSU33820">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -106796,12 +119246,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33700">
+            <rdf:Description rdf:about="#G_BSU33820">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12636"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34878"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -106850,27 +119300,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27910" sboTerm="SBO:0000243" fbc:id="G_BSU27910" fbc:name="G_BSU27910" fbc:label="G_BSU27910">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27910">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008310"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P21204"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU22690" sboTerm="SBO:0000243" fbc:id="G_BSU22690" fbc:name="G_BSU22690" fbc:label="G_BSU22690">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106927,6 +119356,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU27910" sboTerm="SBO:0000243" fbc:id="G_BSU27910" fbc:name="G_BSU27910" fbc:label="G_BSU27910">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU27910">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P21204"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU22710" sboTerm="SBO:0000243" fbc:id="G_BSU22710" fbc:name="G_BSU22710" fbc:label="G_BSU22710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107057,6 +119507,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU08240" sboTerm="SBO:0000243" fbc:id="G_BSU08240" fbc:name="G_BSU08240" fbc:label="G_BSU08240">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU05950" sboTerm="SBO:0000243" fbc:id="G_BSU05950" fbc:name="G_BSU05950" fbc:label="G_BSU05950">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107123,6 +119580,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU25500" sboTerm="SBO:0000243" fbc:id="G_BSU25500" fbc:name="G_BSU25500" fbc:label="G_BSU25500">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU25500">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54304"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU09840" sboTerm="SBO:0000243" fbc:id="G_BSU09840" fbc:name="G_BSU09840" fbc:label="G_BSU09840">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107153,7 +119634,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU25500" sboTerm="SBO:0000243" fbc:id="G_BSU25500" fbc:name="G_BSU25500" fbc:label="G_BSU25500">
+      <fbc:geneProduct metaid="G_BSU17170" sboTerm="SBO:0000243" fbc:id="G_BSU17170" fbc:name="G_BSU17170" fbc:label="G_BSU17170">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107161,23 +119642,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU25500">
+            <rdf:Description rdf:about="#G_BSU17170">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023404"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11395"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7199171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/93747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS21964.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU36130" sboTerm="SBO:0000243" fbc:id="G_BSU36130" fbc:name="G_BSU36130" fbc:label="G_BSU36130">
+      <fbc:geneProduct metaid="G_BSU15340" sboTerm="SBO:0000243" fbc:id="G_BSU15340" fbc:name="G_BSU15340" fbc:label="G_BSU15340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107185,12 +119666,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU36130">
+            <rdf:Description rdf:about="#G_BSU15340">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12520"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10771"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107217,7 +119700,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09440" sboTerm="SBO:0000243" fbc:id="G_BSU09440" fbc:name="G_BSU09440" fbc:label="G_BSU09440">
+      <fbc:geneProduct metaid="G_BSU36130" sboTerm="SBO:0000243" fbc:id="G_BSU36130" fbc:name="G_BSU36130" fbc:label="G_BSU36130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107225,25 +119708,45 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU09440">
+            <rdf:Description rdf:about="#G_BSU36130">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05215"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU29140" sboTerm="SBO:0000243" fbc:id="G_BSU29140" fbc:name="G_BSU29140" fbc:label="G_BSU29140">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU29140">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011278"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016141"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016142"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016143"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019810"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10854"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2C6X"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10855"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39120"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29140" sboTerm="SBO:0000243" fbc:id="G_BSU29140" fbc:name="G_BSU29140" fbc:label="G_BSU29140">
+      <fbc:geneProduct metaid="G_BSU09440" sboTerm="SBO:0000243" fbc:id="G_BSU09440" fbc:name="G_BSU09440" fbc:label="G_BSU09440">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107251,18 +119754,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29140">
+            <rdf:Description rdf:about="#G_BSU09440">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011278"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016141"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016142"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016143"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019810"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10855"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39120"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10854"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2C6X"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39119"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU09890" sboTerm="SBO:0000243" fbc:id="G_BSU09890" fbc:name="G_BSU09890" fbc:label="G_BSU09890">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU09890">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044868"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107298,7 +119820,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU17170" sboTerm="SBO:0000243" fbc:id="G_BSU17170" fbc:name="G_BSU17170" fbc:label="G_BSU17170">
+      <fbc:geneProduct metaid="G_BSU37150" sboTerm="SBO:0000243" fbc:id="G_BSU37150" fbc:name="G_BSU37150" fbc:label="G_BSU37150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107306,23 +119828,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU17170">
+            <rdf:Description rdf:about="#G_BSU37150">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7199171"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000130"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11557"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/93747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS21964.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P13242"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37150" sboTerm="SBO:0000243" fbc:id="G_BSU37150" fbc:name="G_BSU37150" fbc:label="G_BSU37150">
+      <fbc:geneProduct metaid="G_BSU06300" sboTerm="SBO:0000243" fbc:id="G_BSU06300" fbc:name="G_BSU06300" fbc:label="G_BSU06300">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU24540" sboTerm="SBO:0000243" fbc:id="G_BSU24540" fbc:name="G_BSU24540" fbc:label="G_BSU24540">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107330,16 +119859,31 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU37150">
+            <rdf:Description rdf:about="#G_BSU24540">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004468"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10410"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P13242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WKH8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172969"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU40480" sboTerm="SBO:0000243" fbc:id="G_BSU40480" fbc:name="G_BSU40480" fbc:label="G_BSU40480">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU40480">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044890"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107469,13 +120013,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39490" sboTerm="SBO:0000243" fbc:id="G_BSU39490" fbc:name="G_BSU39490" fbc:label="G_BSU39490">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03370" sboTerm="SBO:0000243" fbc:id="G_BSU03370" fbc:name="G_BSU03370" fbc:label="G_BSU03370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107522,13 +120059,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU19140" sboTerm="SBO:0000243" fbc:id="G_BSU19140" fbc:name="G_BSU19140" fbc:label="G_BSU19140">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU30720" sboTerm="SBO:0000243" fbc:id="G_BSU30720" fbc:name="G_BSU30720" fbc:label="G_BSU30720">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107549,7 +120079,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38760" sboTerm="SBO:0000243" fbc:id="G_BSU38760" fbc:name="G_BSU38760" fbc:label="G_BSU38760">
+      <fbc:geneProduct metaid="G_BSU30710" sboTerm="SBO:0000243" fbc:id="G_BSU30710" fbc:name="G_BSU30710" fbc:label="G_BSU30710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107557,39 +120087,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38760">
+            <rdf:Description rdf:about="#G_BSU30710">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11925"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP90"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38750" sboTerm="SBO:0000243" fbc:id="G_BSU38750" fbc:name="G_BSU38750" fbc:label="G_BSU38750">
+      <fbc:geneProduct metaid="G_BSU19140" sboTerm="SBO:0000243" fbc:id="G_BSU19140" fbc:name="G_BSU19140" fbc:label="G_BSU19140">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38750">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94365"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30710" sboTerm="SBO:0000243" fbc:id="G_BSU30710" fbc:name="G_BSU30710" fbc:label="G_BSU30710">
+      <fbc:geneProduct metaid="G_BSU38760" sboTerm="SBO:0000243" fbc:id="G_BSU38760" fbc:name="G_BSU38760" fbc:label="G_BSU38760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107597,25 +120114,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30710">
+            <rdf:Description rdf:about="#G_BSU38760">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13857"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP90"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11925"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94364"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38730" sboTerm="SBO:0000243" fbc:id="G_BSU38730" fbc:name="G_BSU38730" fbc:label="G_BSU38730">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38740" sboTerm="SBO:0000243" fbc:id="G_BSU38740" fbc:name="G_BSU38740" fbc:label="G_BSU38740">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107623,7 +120133,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38140" sboTerm="SBO:0000243" fbc:id="G_BSU38140" fbc:name="G_BSU38140" fbc:label="G_BSU38140">
+      <fbc:geneProduct metaid="G_BSU38750" sboTerm="SBO:0000243" fbc:id="G_BSU38750" fbc:name="G_BSU38750" fbc:label="G_BSU38750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107631,20 +120141,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38140">
+            <rdf:Description rdf:about="#G_BSU38750">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005171"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10586"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P34959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94365"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38150" sboTerm="SBO:0000243" fbc:id="G_BSU38150" fbc:name="G_BSU38150" fbc:label="G_BSU38150">
+      <fbc:geneProduct metaid="G_BSU38730" sboTerm="SBO:0000243" fbc:id="G_BSU38730" fbc:name="G_BSU38730" fbc:label="G_BSU38730">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU38160" sboTerm="SBO:0000243" fbc:id="G_BSU38160" fbc:name="G_BSU38160" fbc:label="G_BSU38160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107652,15 +120168,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38150">
+            <rdf:Description rdf:about="#G_BSU38160">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000298"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014246"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024791"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P34958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P34956"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107692,7 +120208,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38160" sboTerm="SBO:0000243" fbc:id="G_BSU38160" fbc:name="G_BSU38160" fbc:label="G_BSU38160">
+      <fbc:geneProduct metaid="G_BSU38140" sboTerm="SBO:0000243" fbc:id="G_BSU38140" fbc:name="G_BSU38140" fbc:label="G_BSU38140">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107700,15 +120216,36 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38160">
+            <rdf:Description rdf:about="#G_BSU38140">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014233"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023616"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10584"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P34956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P34959"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU38150" sboTerm="SBO:0000243" fbc:id="G_BSU38150" fbc:name="G_BSU38150" fbc:label="G_BSU38150">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU38150">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P34958"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107765,7 +120302,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39020" sboTerm="SBO:0000243" fbc:id="G_BSU39020" fbc:name="G_BSU39020" fbc:label="G_BSU39020">
+      <fbc:geneProduct metaid="G_BSU32180" sboTerm="SBO:0000243" fbc:id="G_BSU32180" fbc:name="G_BSU32180" fbc:label="G_BSU32180">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107773,15 +120310,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39020">
+            <rdf:Description rdf:about="#G_BSU32180">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002668"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011642"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011657"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11150"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32115"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107811,7 +120349,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32180" sboTerm="SBO:0000243" fbc:id="G_BSU32180" fbc:name="G_BSU32180" fbc:label="G_BSU32180">
+      <fbc:geneProduct metaid="G_BSU39020" sboTerm="SBO:0000243" fbc:id="G_BSU39020" fbc:name="G_BSU39020" fbc:label="G_BSU39020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107819,16 +120357,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32180">
+            <rdf:Description rdf:about="#G_BSU39020">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002668"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008276"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011642"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011657"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14047"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42312"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -107857,7 +120394,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06070" sboTerm="SBO:0000243" fbc:id="G_BSU06070" fbc:name="G_BSU06070" fbc:label="G_BSU06070">
+      <fbc:geneProduct metaid="G_BSU06060" sboTerm="SBO:0000243" fbc:id="G_BSU06060" fbc:name="G_BSU06060" fbc:label="G_BSU06060">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU20250" sboTerm="SBO:0000243" fbc:id="G_BSU20250" fbc:name="G_BSU20250" fbc:label="G_BSU20250">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107865,27 +120409,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU06070">
+            <rdf:Description rdf:about="#G_BSU20250">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018117"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AC0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AC0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P68585"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06060" sboTerm="SBO:0000243" fbc:id="G_BSU06060" fbc:name="G_BSU06060" fbc:label="G_BSU06060">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU20250" sboTerm="SBO:0000243" fbc:id="G_BSU20250" fbc:name="G_BSU20250" fbc:label="G_BSU20250">
+      <fbc:geneProduct metaid="G_BSU06070" sboTerm="SBO:0000243" fbc:id="G_BSU06070" fbc:name="G_BSU06070" fbc:label="G_BSU06070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -107893,14 +120431,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU20250">
+            <rdf:Description rdf:about="#G_BSU06070">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018117"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P68585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AC0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AC0"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -108029,6 +120566,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU06720" sboTerm="SBO:0000243" fbc:id="G_BSU06720" fbc:name="G_BSU06720" fbc:label="G_BSU06720">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU29940" sboTerm="SBO:0000243" fbc:id="G_BSU29940" fbc:name="G_BSU29940" fbc:label="G_BSU29940">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108296,7 +120840,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29100" sboTerm="SBO:0000243" fbc:id="G_BSU29100" fbc:name="G_BSU29100" fbc:label="G_BSU29100">
+      <fbc:geneProduct metaid="G_BSU09120" sboTerm="SBO:0000243" fbc:id="G_BSU09120" fbc:name="G_BSU09120" fbc:label="G_BSU09120">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU13250" sboTerm="SBO:0000243" fbc:id="G_BSU13250" fbc:name="G_BSU13250" fbc:label="G_BSU13250">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108322,14 +120873,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09120" sboTerm="SBO:0000243" fbc:id="G_BSU09120" fbc:name="G_BSU09120" fbc:label="G_BSU09120">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13250" sboTerm="SBO:0000243" fbc:id="G_BSU13250" fbc:name="G_BSU13250" fbc:label="G_BSU13250">
+      <fbc:geneProduct metaid="G_BSU29100" sboTerm="SBO:0000243" fbc:id="G_BSU29100" fbc:name="G_BSU29100" fbc:label="G_BSU29100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108464,7 +121008,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU40760" sboTerm="SBO:0000243" fbc:id="G_BSU40760" fbc:name="G_BSU40760" fbc:label="G_BSU40760">
+      <fbc:geneProduct metaid="G_BSU16870" sboTerm="SBO:0000243" fbc:id="G_BSU16870" fbc:name="G_BSU16870" fbc:label="G_BSU16870">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108472,17 +121016,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU40760">
+            <rdf:Description rdf:about="#G_BSU16870">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182R6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182R6"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU21810" sboTerm="SBO:0000243" fbc:id="G_BSU21810" fbc:name="G_BSU21810" fbc:label="G_BSU21810">
+      <fbc:geneProduct metaid="G_BSU40760" sboTerm="SBO:0000243" fbc:id="G_BSU40760" fbc:name="G_BSU40760" fbc:label="G_BSU40760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108490,22 +121039,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU21810">
+            <rdf:Description rdf:about="#G_BSU40760">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017925"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024072"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P11045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896828"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU16870" sboTerm="SBO:0000243" fbc:id="G_BSU16870" fbc:name="G_BSU16870" fbc:label="G_BSU16870">
+      <fbc:geneProduct metaid="G_BSU21810" sboTerm="SBO:0000243" fbc:id="G_BSU21810" fbc:name="G_BSU21810" fbc:label="G_BSU21810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108513,15 +121057,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU16870">
+            <rdf:Description rdf:about="#G_BSU21810">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182R6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182R6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017925"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P11045"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -108595,6 +121139,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU15540" sboTerm="SBO:0000243" fbc:id="G_BSU15540" fbc:name="G_BSU15540" fbc:label="G_BSU15540">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU15540">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001295"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024920"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P25996"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15530" sboTerm="SBO:0000243" fbc:id="G_BSU15530" fbc:name="G_BSU15530" fbc:label="G_BSU15530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108621,30 +121189,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15540" sboTerm="SBO:0000243" fbc:id="G_BSU15540" fbc:name="G_BSU15540" fbc:label="G_BSU15540">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15540">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001295"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024920"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10718"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P25996"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15500" sboTerm="SBO:0000243" fbc:id="G_BSU15500" fbc:name="G_BSU15500" fbc:label="G_BSU15500">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108688,7 +121232,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24470" sboTerm="SBO:0000243" fbc:id="G_BSU24470" fbc:name="G_BSU24470" fbc:label="G_BSU24470">
+      <fbc:geneProduct metaid="G_BSU23080" sboTerm="SBO:0000243" fbc:id="G_BSU23080" fbc:name="G_BSU23080" fbc:label="G_BSU23080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108696,24 +121240,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24470">
+            <rdf:Description rdf:about="#G_BSU23080">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045534"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045534"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897305"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAZ2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P35146"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23080" sboTerm="SBO:0000243" fbc:id="G_BSU23080" fbc:name="G_BSU23080" fbc:label="G_BSU23080">
+      <fbc:geneProduct metaid="G_BSU24470" sboTerm="SBO:0000243" fbc:id="G_BSU24470" fbc:name="G_BSU24470" fbc:label="G_BSU24470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108721,14 +121262,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23080">
+            <rdf:Description rdf:about="#G_BSU24470">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001381"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018508"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P35146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAZ2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176481"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -108764,7 +121308,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU12950" sboTerm="SBO:0000243" fbc:id="G_BSU12950" fbc:name="G_BSU12950" fbc:label="G_BSU12950">
+      <fbc:geneProduct metaid="G_BSU39680" sboTerm="SBO:0000243" fbc:id="G_BSU39680" fbc:name="G_BSU39680" fbc:label="G_BSU39680">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -108772,17 +121316,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU12950">
+            <rdf:Description rdf:about="#G_BSU39680">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10845"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P26905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045859"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -108830,6 +121368,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU12950" sboTerm="SBO:0000243" fbc:id="G_BSU12950" fbc:name="G_BSU12950" fbc:label="G_BSU12950">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU12950">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P26905"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU12940" sboTerm="SBO:0000243" fbc:id="G_BSU12940" fbc:name="G_BSU12940" fbc:label="G_BSU12940">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108919,6 +121482,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU22880" sboTerm="SBO:0000243" fbc:id="G_BSU22880" fbc:name="G_BSU22880" fbc:label="G_BSU22880">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU25160" sboTerm="SBO:0000243" fbc:id="G_BSU25160" fbc:name="G_BSU25160" fbc:label="G_BSU25160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108939,13 +121509,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU22880" sboTerm="SBO:0000243" fbc:id="G_BSU22880" fbc:name="G_BSU22880" fbc:label="G_BSU22880">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23020" sboTerm="SBO:0000243" fbc:id="G_BSU23020" fbc:name="G_BSU23020" fbc:label="G_BSU23020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108992,7 +121555,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15110" sboTerm="SBO:0000243" fbc:id="G_BSU15110" fbc:name="G_BSU15110" fbc:label="G_BSU15110">
+      <fbc:geneProduct metaid="G_BSU14440" sboTerm="SBO:0000243" fbc:id="G_BSU14440" fbc:name="G_BSU14440" fbc:label="G_BSU14440">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109000,25 +121563,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15110">
+            <rdf:Description rdf:about="#G_BSU14440">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013328"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013332"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3EGO"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043055"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14440" sboTerm="SBO:0000243" fbc:id="G_BSU14440" fbc:name="G_BSU14440" fbc:label="G_BSU14440">
+      <fbc:geneProduct metaid="G_BSU15110" sboTerm="SBO:0000243" fbc:id="G_BSU15110" fbc:name="G_BSU15110" fbc:label="G_BSU15110">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109026,11 +121582,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14440">
+            <rdf:Description rdf:about="#G_BSU15110">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3EGO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34661"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -109061,7 +121624,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35960" sboTerm="SBO:0000243" fbc:id="G_BSU35960" fbc:name="G_BSU35960" fbc:label="G_BSU35960">
+      <fbc:geneProduct metaid="G_BSU35940" sboTerm="SBO:0000243" fbc:id="G_BSU35940" fbc:name="G_BSU35940" fbc:label="G_BSU35940">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109069,20 +121632,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35960">
+            <rdf:Description rdf:about="#G_BSU35940">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10881"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36947"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35950" sboTerm="SBO:0000243" fbc:id="G_BSU35950" fbc:name="G_BSU35950" fbc:label="G_BSU35950">
+      <fbc:geneProduct metaid="G_BSU35930" sboTerm="SBO:0000243" fbc:id="G_BSU35930" fbc:name="G_BSU35930" fbc:label="G_BSU35930">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109090,19 +121656,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35950">
+            <rdf:Description rdf:about="#G_BSU35930">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10880"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36948"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGC"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGD"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36946"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35940" sboTerm="SBO:0000243" fbc:id="G_BSU35940" fbc:name="G_BSU35940" fbc:label="G_BSU35940">
+      <fbc:geneProduct metaid="G_BSU35950" sboTerm="SBO:0000243" fbc:id="G_BSU35950" fbc:name="G_BSU35950" fbc:label="G_BSU35950">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109110,23 +121682,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35940">
+            <rdf:Description rdf:about="#G_BSU35950">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015861"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10879"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36948"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35930" sboTerm="SBO:0000243" fbc:id="G_BSU35930" fbc:name="G_BSU35930" fbc:label="G_BSU35930">
+      <fbc:geneProduct metaid="G_BSU35960" sboTerm="SBO:0000243" fbc:id="G_BSU35960" fbc:name="G_BSU35960" fbc:label="G_BSU35960">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109134,18 +121702,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35930">
+            <rdf:Description rdf:about="#G_BSU35960">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007721"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023064"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGC"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGD"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1OGF"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36949"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -109175,6 +121738,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU38540" sboTerm="SBO:0000243" fbc:id="G_BSU38540" fbc:name="G_BSU38540" fbc:label="G_BSU38540">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23780" sboTerm="SBO:0000243" fbc:id="G_BSU23780" fbc:name="G_BSU23780" fbc:label="G_BSU23780">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109198,13 +121768,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38540" sboTerm="SBO:0000243" fbc:id="G_BSU38540" fbc:name="G_BSU38540" fbc:label="G_BSU38540">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU00280" sboTerm="SBO:0000243" fbc:id="G_BSU00280" fbc:name="G_BSU00280" fbc:label="G_BSU00280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109275,7 +121838,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU17660" sboTerm="SBO:0000243" fbc:id="G_BSU17660" fbc:name="G_BSU17660" fbc:label="G_BSU17660">
+      <fbc:geneProduct metaid="G_BSU20020" sboTerm="SBO:0000243" fbc:id="G_BSU20020" fbc:name="G_BSU20020" fbc:label="G_BSU20020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109283,26 +121846,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU17660">
+            <rdf:Description rdf:about="#G_BSU20020">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008180"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029054"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13437"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XCD"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XCE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4AOO"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4AOZ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4APZ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4B0H"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2BAZ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XX6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XY3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2Y1T"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4AO5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34919"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU20020" sboTerm="SBO:0000243" fbc:id="G_BSU20020" fbc:name="G_BSU20020" fbc:label="G_BSU20020">
+      <fbc:geneProduct metaid="G_BSU17660" sboTerm="SBO:0000243" fbc:id="G_BSU17660" fbc:name="G_BSU17660" fbc:label="G_BSU17660">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109310,18 +121872,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU20020">
+            <rdf:Description rdf:about="#G_BSU17660">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008180"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029054"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13728"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2BAZ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XX6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XY3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2Y1T"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4AO5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XCD"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XCE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4AOO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4AOZ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4APZ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4B0H"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31801"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -109511,6 +122074,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU39550" sboTerm="SBO:0000243" fbc:id="G_BSU39550" fbc:name="G_BSU39550" fbc:label="G_BSU39550">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU39550">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11195"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU10540" sboTerm="SBO:0000243" fbc:id="G_BSU10540" fbc:name="G_BSU10540" fbc:label="G_BSU10540">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109532,27 +122116,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39550" sboTerm="SBO:0000243" fbc:id="G_BSU39550" fbc:name="G_BSU39550" fbc:label="G_BSU39550">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39550">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11195"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU36290" sboTerm="SBO:0000243" fbc:id="G_BSU36290" fbc:name="G_BSU36290" fbc:label="G_BSU36290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109621,7 +122184,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28560" sboTerm="SBO:0000243" fbc:id="G_BSU28560" fbc:name="G_BSU28560" fbc:label="G_BSU28560">
+      <fbc:geneProduct metaid="G_BSU18250" sboTerm="SBO:0000243" fbc:id="G_BSU18250" fbc:name="G_BSU18250" fbc:label="G_BSU18250">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109629,21 +122192,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28560">
+            <rdf:Description rdf:about="#G_BSU18250">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000873"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020845"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11946"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31826"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18250" sboTerm="SBO:0000243" fbc:id="G_BSU18250" fbc:name="G_BSU18250" fbc:label="G_BSU18250">
+      <fbc:geneProduct metaid="G_BSU10270" sboTerm="SBO:0000243" fbc:id="G_BSU10270" fbc:name="G_BSU10270" fbc:label="G_BSU10270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109651,21 +122214,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18250">
+            <rdf:Description rdf:about="#G_BSU10270">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020459"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020845"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07610"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10270" sboTerm="SBO:0000243" fbc:id="G_BSU10270" fbc:name="G_BSU10270" fbc:label="G_BSU10270">
+      <fbc:geneProduct metaid="G_BSU28560" sboTerm="SBO:0000243" fbc:id="G_BSU28560" fbc:name="G_BSU28560" fbc:label="G_BSU28560">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109673,22 +122237,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU10270">
+            <rdf:Description rdf:about="#G_BSU28560">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000873"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020459"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020845"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13057"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94547"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01880" sboTerm="SBO:0000243" fbc:id="G_BSU01880" fbc:name="G_BSU01880" fbc:label="G_BSU01880">
+      <fbc:geneProduct metaid="G_BSU01830" sboTerm="SBO:0000243" fbc:id="G_BSU01830" fbc:name="G_BSU01830" fbc:label="G_BSU01830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109709,12 +122272,33 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01830" sboTerm="SBO:0000243" fbc:id="G_BSU01830" fbc:name="G_BSU01830" fbc:label="G_BSU01830">
+      <fbc:geneProduct metaid="G_BSU01880" sboTerm="SBO:0000243" fbc:id="G_BSU01880" fbc:name="G_BSU01880" fbc:label="G_BSU01880">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU28530" sboTerm="SBO:0000243" fbc:id="G_BSU28530" fbc:name="G_BSU28530" fbc:label="G_BSU28530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU28530">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7196905"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU37180" sboTerm="SBO:0000243" fbc:id="G_BSU37180" fbc:name="G_BSU37180" fbc:label="G_BSU37180">
         <notes>
@@ -109723,7 +122307,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28530" sboTerm="SBO:0000243" fbc:id="G_BSU28530" fbc:name="G_BSU28530" fbc:label="G_BSU28530">
+      <fbc:geneProduct metaid="G_BSU37120" sboTerm="SBO:0000243" fbc:id="G_BSU37120" fbc:name="G_BSU37120" fbc:label="G_BSU37120">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109731,13 +122315,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28530">
+            <rdf:Description rdf:about="#G_BSU37120">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000049"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7196905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P13243"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -109766,7 +122351,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37120" sboTerm="SBO:0000243" fbc:id="G_BSU37120" fbc:name="G_BSU37120" fbc:label="G_BSU37120">
+      <fbc:geneProduct metaid="G_BSU03510" sboTerm="SBO:0000243" fbc:id="G_BSU03510" fbc:name="G_BSU03510" fbc:label="G_BSU03510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109774,14 +122359,32 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU37120">
+            <rdf:Description rdf:about="#G_BSU03510">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000771"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011289"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10412"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P13243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042543"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU03480" sboTerm="SBO:0000243" fbc:id="G_BSU03480" fbc:name="G_BSU03480" fbc:label="G_BSU03480">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU03480">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042600"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -109869,7 +122472,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27220" sboTerm="SBO:0000243" fbc:id="G_BSU27220" fbc:name="G_BSU27220" fbc:label="G_BSU27220">
+      <fbc:geneProduct metaid="G_BSU18570" sboTerm="SBO:0000243" fbc:id="G_BSU18570" fbc:name="G_BSU18570" fbc:label="G_BSU18570">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109877,21 +122480,45 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27220">
+            <rdf:Description rdf:about="#G_BSU18570">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP82"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU12160" sboTerm="SBO:0000243" fbc:id="G_BSU12160" fbc:name="G_BSU12160" fbc:label="G_BSU12160">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU12160">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001450"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006478"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017896"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017900"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q795Y4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34720"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -109919,7 +122546,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU12160" sboTerm="SBO:0000243" fbc:id="G_BSU12160" fbc:name="G_BSU12160" fbc:label="G_BSU12160">
+      <fbc:geneProduct metaid="G_BSU27220" sboTerm="SBO:0000243" fbc:id="G_BSU27220" fbc:name="G_BSU27220" fbc:label="G_BSU27220">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -109927,45 +122554,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU12160">
+            <rdf:Description rdf:about="#G_BSU27220">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001450"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006478"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017896"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017900"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34720"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18570" sboTerm="SBO:0000243" fbc:id="G_BSU18570" fbc:name="G_BSU18570" fbc:label="G_BSU18570">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18570">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13476"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP82"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q795Y4"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -110051,7 +122654,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01630" sboTerm="SBO:0000243" fbc:id="G_BSU01630" fbc:name="G_BSU01630" fbc:label="G_BSU01630">
+      <fbc:geneProduct metaid="G_BSU01620" sboTerm="SBO:0000243" fbc:id="G_BSU01620" fbc:name="G_BSU01620" fbc:label="G_BSU01620">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110059,31 +122662,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01630">
+            <rdf:Description rdf:about="#G_BSU01620">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002491"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2PHZ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2WHY"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2WI8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XUZ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XV1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P40409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P40410"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10330" sboTerm="SBO:0000243" fbc:id="G_BSU10330" fbc:name="G_BSU10330" fbc:label="G_BSU10330">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01620" sboTerm="SBO:0000243" fbc:id="G_BSU01620" fbc:name="G_BSU01620" fbc:label="G_BSU01620">
+      <fbc:geneProduct metaid="G_BSU01610" sboTerm="SBO:0000243" fbc:id="G_BSU01610" fbc:name="G_BSU01610" fbc:label="G_BSU01610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110091,20 +122683,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01620">
+            <rdf:Description rdf:about="#G_BSU01610">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P40410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P40411"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01610" sboTerm="SBO:0000243" fbc:id="G_BSU01610" fbc:name="G_BSU01610" fbc:label="G_BSU01610">
+      <fbc:geneProduct metaid="G_BSU01630" sboTerm="SBO:0000243" fbc:id="G_BSU01630" fbc:name="G_BSU01630" fbc:label="G_BSU01630">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110112,45 +122704,36 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01610">
+            <rdf:Description rdf:about="#G_BSU01630">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10837"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P40411"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2PHZ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2WHY"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2WI8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XUZ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2XV1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P40409"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27920" sboTerm="SBO:0000243" fbc:id="G_BSU27920" fbc:name="G_BSU27920" fbc:label="G_BSU27920">
+      <fbc:geneProduct metaid="G_BSU10330" sboTerm="SBO:0000243" fbc:id="G_BSU10330" fbc:name="G_BSU10330" fbc:label="G_BSU10330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06650" sboTerm="SBO:0000243" fbc:id="G_BSU06650" fbc:name="G_BSU06650" fbc:label="G_BSU06650">
+      <fbc:geneProduct metaid="G_BSU27920" sboTerm="SBO:0000243" fbc:id="G_BSU27920" fbc:name="G_BSU27920" fbc:label="G_BSU27920">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU06650">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B3"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU16050" sboTerm="SBO:0000243" fbc:id="G_BSU16050" fbc:name="G_BSU16050" fbc:label="G_BSU16050">
         <notes>
@@ -110177,6 +122760,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU06650" sboTerm="SBO:0000243" fbc:id="G_BSU06650" fbc:name="G_BSU06650" fbc:label="G_BSU06650">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU06650">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B3"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU04060" sboTerm="SBO:0000243" fbc:id="G_BSU04060" fbc:name="G_BSU04060" fbc:label="G_BSU04060">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110197,7 +122800,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15340" sboTerm="SBO:0000243" fbc:id="G_BSU15340" fbc:name="G_BSU15340" fbc:label="G_BSU15340">
+      <fbc:geneProduct metaid="G_BSU05610" sboTerm="SBO:0000243" fbc:id="G_BSU05610" fbc:name="G_BSU05610" fbc:label="G_BSU05610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110205,21 +122808,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15340">
+            <rdf:Description rdf:about="#G_BSU05610">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14175"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899360"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKD5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176209"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30610" sboTerm="SBO:0000243" fbc:id="G_BSU30610" fbc:name="G_BSU30610" fbc:label="G_BSU30610">
+      <fbc:geneProduct metaid="G_BSU38270" sboTerm="SBO:0000243" fbc:id="G_BSU38270" fbc:name="G_BSU38270" fbc:label="G_BSU38270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110227,51 +122830,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30610">
+            <rdf:Description rdf:about="#G_BSU38270">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187T8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187T8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185N2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185N2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181C6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181C6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181C9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181C9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10574"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38260" sboTerm="SBO:0000243" fbc:id="G_BSU38260" fbc:name="G_BSU38260" fbc:label="G_BSU38260">
+      <fbc:geneProduct metaid="G_BSU38280" sboTerm="SBO:0000243" fbc:id="G_BSU38280" fbc:name="G_BSU38280" fbc:label="G_BSU38280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110279,23 +122848,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38260">
+            <rdf:Description rdf:about="#G_BSU38280">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006311"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006314"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011008"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019546"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10575"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39595"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38270" sboTerm="SBO:0000243" fbc:id="G_BSU38270" fbc:name="G_BSU38270" fbc:label="G_BSU38270">
+      <fbc:geneProduct metaid="G_BSU38260" sboTerm="SBO:0000243" fbc:id="G_BSU38260" fbc:name="G_BSU38260" fbc:label="G_BSU38260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110303,17 +122868,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38270">
+            <rdf:Description rdf:about="#G_BSU38260">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011008"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39597"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38280" sboTerm="SBO:0000243" fbc:id="G_BSU38280" fbc:name="G_BSU38280" fbc:label="G_BSU38280">
+      <fbc:geneProduct metaid="G_BSU08450" sboTerm="SBO:0000243" fbc:id="G_BSU08450" fbc:name="G_BSU08450" fbc:label="G_BSU08450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -110321,12 +122892,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38280">
+            <rdf:Description rdf:about="#G_BSU08450">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31568"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -110374,27 +122946,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08450" sboTerm="SBO:0000243" fbc:id="G_BSU08450" fbc:name="G_BSU08450" fbc:label="G_BSU08450">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08450">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31568"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU30650" sboTerm="SBO:0000243" fbc:id="G_BSU30650" fbc:name="G_BSU30650" fbc:label="G_BSU30650">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110512,13 +123063,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09340" sboTerm="SBO:0000243" fbc:id="G_BSU09340" fbc:name="G_BSU09340" fbc:label="G_BSU09340">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU36150" sboTerm="SBO:0000243" fbc:id="G_BSU36150" fbc:name="G_BSU36150" fbc:label="G_BSU36150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110544,6 +123088,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU09340" sboTerm="SBO:0000243" fbc:id="G_BSU09340" fbc:name="G_BSU09340" fbc:label="G_BSU09340">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38110" sboTerm="SBO:0000243" fbc:id="G_BSU38110" fbc:name="G_BSU38110" fbc:label="G_BSU38110">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110589,6 +123140,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU24890" sboTerm="SBO:0000243" fbc:id="G_BSU24890" fbc:name="G_BSU24890" fbc:label="G_BSU24890">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU24890">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC28"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11158"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU27200" sboTerm="SBO:0000243" fbc:id="G_BSU27200" fbc:name="G_BSU27200" fbc:label="G_BSU27200">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110698,6 +123270,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU27070" sboTerm="SBO:0000243" fbc:id="G_BSU27070" fbc:name="G_BSU27070" fbc:label="G_BSU27070">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU27070">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P26379"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU14400" sboTerm="SBO:0000243" fbc:id="G_BSU14400" fbc:name="G_BSU14400" fbc:label="G_BSU14400">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110791,27 +123384,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27070" sboTerm="SBO:0000243" fbc:id="G_BSU27070" fbc:name="G_BSU27070" fbc:label="G_BSU27070">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27070">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013789"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10316"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P26379"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU13110" sboTerm="SBO:0000243" fbc:id="G_BSU13110" fbc:name="G_BSU13110" fbc:label="G_BSU13110">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -111381,7 +123953,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35670" sboTerm="SBO:0000243" fbc:id="G_BSU35670" fbc:name="G_BSU35670" fbc:label="G_BSU35670">
+      <fbc:geneProduct metaid="G_BSU30850" sboTerm="SBO:0000243" fbc:id="G_BSU30850" fbc:name="G_BSU30850" fbc:label="G_BSU30850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -111389,21 +123961,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35670">
+            <rdf:Description rdf:about="#G_BSU30850">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005771"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029044"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10402"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q05852"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899301"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30850" sboTerm="SBO:0000243" fbc:id="G_BSU30850" fbc:name="G_BSU30850" fbc:label="G_BSU30850">
+      <fbc:geneProduct metaid="G_BSU35670" sboTerm="SBO:0000243" fbc:id="G_BSU35670" fbc:name="G_BSU35670" fbc:label="G_BSU35670">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -111411,10 +123979,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30850">
+            <rdf:Description rdf:about="#G_BSU35670">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q05852"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -111842,13 +124414,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03920" sboTerm="SBO:0000243" fbc:id="G_BSU03920" fbc:name="G_BSU03920" fbc:label="G_BSU03920">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU13890" sboTerm="SBO:0000243" fbc:id="G_BSU13890" fbc:name="G_BSU13890" fbc:label="G_BSU13890">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -111878,6 +124443,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU03920" sboTerm="SBO:0000243" fbc:id="G_BSU03920" fbc:name="G_BSU03920" fbc:label="G_BSU03920">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU10520" sboTerm="SBO:0000243" fbc:id="G_BSU10520" fbc:name="G_BSU10520" fbc:label="G_BSU10520">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -111900,7 +124472,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30960" sboTerm="SBO:0000243" fbc:id="G_BSU30960" fbc:name="G_BSU30960" fbc:label="G_BSU30960">
+      <fbc:geneProduct metaid="G_BSU30970" sboTerm="SBO:0000243" fbc:id="G_BSU30970" fbc:name="G_BSU30970" fbc:label="G_BSU30970">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -111908,22 +124480,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30960">
+            <rdf:Description rdf:about="#G_BSU30970">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005836"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023049"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029044"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10909"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39122"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30970" sboTerm="SBO:0000243" fbc:id="G_BSU30970" fbc:name="G_BSU30970" fbc:label="G_BSU30970">
+      <fbc:geneProduct metaid="G_BSU30960" sboTerm="SBO:0000243" fbc:id="G_BSU30960" fbc:name="G_BSU30960" fbc:label="G_BSU30960">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -111931,17 +124505,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30970">
+            <rdf:Description rdf:about="#G_BSU30960">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005836"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011831"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011832"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029044"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10909"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39124"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -111981,6 +124553,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU27430" sboTerm="SBO:0000243" fbc:id="G_BSU27430" fbc:name="G_BSU27430" fbc:label="G_BSU27430">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU27430">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34677"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03600" sboTerm="SBO:0000243" fbc:id="G_BSU03600" fbc:name="G_BSU03600" fbc:label="G_BSU03600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112002,6 +124597,48 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU27460" sboTerm="SBO:0000243" fbc:id="G_BSU27460" fbc:name="G_BSU27460" fbc:label="G_BSU27460">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU27460">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34606"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU27440" sboTerm="SBO:0000243" fbc:id="G_BSU27440" fbc:name="G_BSU27440" fbc:label="G_BSU27440">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU27440">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34563"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU27450" sboTerm="SBO:0000243" fbc:id="G_BSU27450" fbc:name="G_BSU27450" fbc:label="G_BSU27450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112023,71 +124660,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27430" sboTerm="SBO:0000243" fbc:id="G_BSU27430" fbc:name="G_BSU27430" fbc:label="G_BSU27430">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27430">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34677"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03610" sboTerm="SBO:0000243" fbc:id="G_BSU03610" fbc:name="G_BSU03610" fbc:label="G_BSU03610">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03610">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42199"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27460" sboTerm="SBO:0000243" fbc:id="G_BSU27460" fbc:name="G_BSU27460" fbc:label="G_BSU27460">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27460">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11488"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34606"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03590" sboTerm="SBO:0000243" fbc:id="G_BSU03590" fbc:name="G_BSU03590" fbc:label="G_BSU03590">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112111,7 +124683,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27440" sboTerm="SBO:0000243" fbc:id="G_BSU27440" fbc:name="G_BSU27440" fbc:label="G_BSU27440">
+      <fbc:geneProduct metaid="G_BSU03730" sboTerm="SBO:0000243" fbc:id="G_BSU03730" fbc:name="G_BSU03730" fbc:label="G_BSU03730">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112119,20 +124691,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27440">
+            <rdf:Description rdf:about="#G_BSU03730">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11486"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886977"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03730" sboTerm="SBO:0000243" fbc:id="G_BSU03730" fbc:name="G_BSU03730" fbc:label="G_BSU03730">
+      <fbc:geneProduct metaid="G_BSU03610" sboTerm="SBO:0000243" fbc:id="G_BSU03610" fbc:name="G_BSU03610" fbc:label="G_BSU03610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112140,10 +124709,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03730">
+            <rdf:Description rdf:about="#G_BSU03610">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42199"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -112175,7 +124747,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13120" sboTerm="SBO:0000243" fbc:id="G_BSU13120" fbc:name="G_BSU13120" fbc:label="G_BSU13120">
+      <fbc:geneProduct metaid="G_BSU18470" sboTerm="SBO:0000243" fbc:id="G_BSU18470" fbc:name="G_BSU18470" fbc:label="G_BSU18470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112183,7 +124755,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU13120">
+            <rdf:Description rdf:about="#G_BSU18470">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001048"/>
@@ -112193,15 +124765,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011529"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015947"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019797"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07509"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18470" sboTerm="SBO:0000243" fbc:id="G_BSU18470" fbc:name="G_BSU18470" fbc:label="G_BSU18470">
+      <fbc:geneProduct metaid="G_BSU13120" sboTerm="SBO:0000243" fbc:id="G_BSU13120" fbc:name="G_BSU13120" fbc:label="G_BSU13120">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112209,7 +124781,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18470">
+            <rdf:Description rdf:about="#G_BSU13120">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001048"/>
@@ -112219,8 +124791,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011529"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015947"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019797"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12658"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39820"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -112277,7 +124849,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14830" sboTerm="SBO:0000243" fbc:id="G_BSU14830" fbc:name="G_BSU14830" fbc:label="G_BSU14830">
+      <fbc:geneProduct metaid="G_BSU02430" sboTerm="SBO:0000243" fbc:id="G_BSU02430" fbc:name="G_BSU02430" fbc:label="G_BSU02430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112285,20 +124857,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14830">
+            <rdf:Description rdf:about="#G_BSU02430">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13350"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07637"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1MKI"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2OSU"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3AGF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3BRM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31465"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02430" sboTerm="SBO:0000243" fbc:id="G_BSU02430" fbc:name="G_BSU02430" fbc:label="G_BSU02430">
+      <fbc:geneProduct metaid="G_BSU14830" sboTerm="SBO:0000243" fbc:id="G_BSU14830" fbc:name="G_BSU14830" fbc:label="G_BSU14830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112306,17 +124882,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02430">
+            <rdf:Description rdf:about="#G_BSU14830">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1MKI"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2OSU"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3AGF"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3BRM"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31465"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13350"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07637"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -112652,7 +125224,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09890" sboTerm="SBO:0000243" fbc:id="G_BSU09890" fbc:name="G_BSU09890" fbc:label="G_BSU09890">
+      <fbc:geneProduct metaid="G_BSU02990" sboTerm="SBO:0000243" fbc:id="G_BSU02990" fbc:name="G_BSU02990" fbc:label="G_BSU02990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112660,11 +125232,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU09890">
+            <rdf:Description rdf:about="#G_BSU02990">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46921"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -112719,26 +125292,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02990" sboTerm="SBO:0000243" fbc:id="G_BSU02990" fbc:name="G_BSU02990" fbc:label="G_BSU02990">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02990">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11371"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46921"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU30070" sboTerm="SBO:0000243" fbc:id="G_BSU30070" fbc:name="G_BSU30070" fbc:label="G_BSU30070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112827,7 +125380,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03060" sboTerm="SBO:0000243" fbc:id="G_BSU03060" fbc:name="G_BSU03060" fbc:label="G_BSU03060">
+      <fbc:geneProduct metaid="G_BSU34190" sboTerm="SBO:0000243" fbc:id="G_BSU34190" fbc:name="G_BSU34190" fbc:label="G_BSU34190">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112835,19 +125388,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03060">
+            <rdf:Description rdf:about="#G_BSU34190">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P55910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P71067"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34190" sboTerm="SBO:0000243" fbc:id="G_BSU34190" fbc:name="G_BSU34190" fbc:label="G_BSU34190">
+      <fbc:geneProduct metaid="G_BSU03060" sboTerm="SBO:0000243" fbc:id="G_BSU03060" fbc:name="G_BSU03060" fbc:label="G_BSU03060">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -112855,12 +125408,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34190">
+            <rdf:Description rdf:about="#G_BSU03060">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P71067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P55910"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -112958,20 +125511,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU07620" sboTerm="SBO:0000243" fbc:id="G_BSU07620" fbc:name="G_BSU07620" fbc:label="G_BSU07620">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU26510" sboTerm="SBO:0000243" fbc:id="G_BSU26510" fbc:name="G_BSU26510" fbc:label="G_BSU26510">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU19080" sboTerm="SBO:0000243" fbc:id="G_BSU19080" fbc:name="G_BSU19080" fbc:label="G_BSU19080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113000,6 +125539,20 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU26510" sboTerm="SBO:0000243" fbc:id="G_BSU26510" fbc:name="G_BSU26510" fbc:label="G_BSU26510">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU07620" sboTerm="SBO:0000243" fbc:id="G_BSU07620" fbc:name="G_BSU07620" fbc:label="G_BSU07620">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU32130" sboTerm="SBO:0000243" fbc:id="G_BSU32130" fbc:name="G_BSU32130" fbc:label="G_BSU32130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113050,6 +125603,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU25730" sboTerm="SBO:0000243" fbc:id="G_BSU25730" fbc:name="G_BSU25730" fbc:label="G_BSU25730">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23860" sboTerm="SBO:0000243" fbc:id="G_BSU23860" fbc:name="G_BSU23860" fbc:label="G_BSU23860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113077,13 +125637,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU25730" sboTerm="SBO:0000243" fbc:id="G_BSU25730" fbc:name="G_BSU25730" fbc:label="G_BSU25730">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU40080" sboTerm="SBO:0000243" fbc:id="G_BSU40080" fbc:name="G_BSU40080" fbc:label="G_BSU40080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113157,13 +125710,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24180" sboTerm="SBO:0000243" fbc:id="G_BSU24180" fbc:name="G_BSU24180" fbc:label="G_BSU24180">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU02130" sboTerm="SBO:0000243" fbc:id="G_BSU02130" fbc:name="G_BSU02130" fbc:label="G_BSU02130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113185,6 +125731,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU24180" sboTerm="SBO:0000243" fbc:id="G_BSU24180" fbc:name="G_BSU24180" fbc:label="G_BSU24180">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU21900" sboTerm="SBO:0000243" fbc:id="G_BSU21900" fbc:name="G_BSU21900" fbc:label="G_BSU21900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113417,7 +125970,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29990" sboTerm="SBO:0000243" fbc:id="G_BSU29990" fbc:name="G_BSU29990" fbc:label="G_BSU29990">
+      <fbc:geneProduct metaid="G_BSU06370" sboTerm="SBO:0000243" fbc:id="G_BSU06370" fbc:name="G_BSU06370" fbc:label="G_BSU06370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -113425,20 +125978,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29990">
+            <rdf:Description rdf:about="#G_BSU06370">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006043"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026033"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13864"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34987"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06370" sboTerm="SBO:0000243" fbc:id="G_BSU06370" fbc:name="G_BSU06370" fbc:label="G_BSU06370">
+      <fbc:geneProduct metaid="G_BSU29990" sboTerm="SBO:0000243" fbc:id="G_BSU29990" fbc:name="G_BSU29990" fbc:label="G_BSU29990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -113446,13 +125999,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU06370">
+            <rdf:Description rdf:about="#G_BSU29990">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006043"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026033"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12811"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13864"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34978"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -113599,6 +126152,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU14880" sboTerm="SBO:0000243" fbc:id="G_BSU14880" fbc:name="G_BSU14880" fbc:label="G_BSU14880">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU14880">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P24009"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU12080" sboTerm="SBO:0000243" fbc:id="G_BSU12080" fbc:name="G_BSU12080" fbc:label="G_BSU12080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113620,7 +126194,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14880" sboTerm="SBO:0000243" fbc:id="G_BSU14880" fbc:name="G_BSU14880" fbc:label="G_BSU14880">
+      <fbc:geneProduct metaid="G_BSU38300" sboTerm="SBO:0000243" fbc:id="G_BSU38300" fbc:name="G_BSU38300" fbc:label="G_BSU38300">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -113628,13 +126202,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14880">
+            <rdf:Description rdf:about="#G_BSU38300">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P24009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1C3Q"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1EKK"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1EKQ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1ESJ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1ESQ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39593"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -113659,32 +126238,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38300" sboTerm="SBO:0000243" fbc:id="G_BSU38300" fbc:name="G_BSU38300" fbc:label="G_BSU38300">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38300">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029056"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1C3Q"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1EKK"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1EKQ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1ESJ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1ESQ"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39593"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU24850" sboTerm="SBO:0000243" fbc:id="G_BSU24850" fbc:name="G_BSU24850" fbc:label="G_BSU24850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113751,6 +126304,40 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU33510" sboTerm="SBO:0000243" fbc:id="G_BSU33510" fbc:name="G_BSU33510" fbc:label="G_BSU33510">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU33510">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1K0V"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1P8G"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2QIF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3I9Z"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32221"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU10750" sboTerm="SBO:0000243" fbc:id="G_BSU10750" fbc:name="G_BSU10750" fbc:label="G_BSU10750">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU07990" sboTerm="SBO:0000243" fbc:id="G_BSU07990" fbc:name="G_BSU07990" fbc:label="G_BSU07990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114254,7 +126841,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32470" sboTerm="SBO:0000243" fbc:id="G_BSU32470" fbc:name="G_BSU32470" fbc:label="G_BSU32470">
+      <fbc:geneProduct metaid="G_BSU32500" sboTerm="SBO:0000243" fbc:id="G_BSU32500" fbc:name="G_BSU32500" fbc:label="G_BSU32500">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114262,23 +126849,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32470">
+            <rdf:Description rdf:about="#G_BSU32500">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32146"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32490" sboTerm="SBO:0000243" fbc:id="G_BSU32490" fbc:name="G_BSU32490" fbc:label="G_BSU32490">
+      <fbc:geneProduct metaid="G_BSU32510" sboTerm="SBO:0000243" fbc:id="G_BSU32510" fbc:name="G_BSU32510" fbc:label="G_BSU32510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114286,16 +126871,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32490">
+            <rdf:Description rdf:about="#G_BSU32510">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005107"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016166"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017612"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003777"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32147"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -114324,7 +126906,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32510" sboTerm="SBO:0000243" fbc:id="G_BSU32510" fbc:name="G_BSU32510" fbc:label="G_BSU32510">
+      <fbc:geneProduct metaid="G_BSU32470" sboTerm="SBO:0000243" fbc:id="G_BSU32470" fbc:name="G_BSU32470" fbc:label="G_BSU32470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114332,20 +126914,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32510">
+            <rdf:Description rdf:about="#G_BSU32470">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003777"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13992"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32143"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32500" sboTerm="SBO:0000243" fbc:id="G_BSU32500" fbc:name="G_BSU32500" fbc:label="G_BSU32500">
+      <fbc:geneProduct metaid="G_BSU32490" sboTerm="SBO:0000243" fbc:id="G_BSU32490" fbc:name="G_BSU32490" fbc:label="G_BSU32490">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114353,14 +126938,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32500">
+            <rdf:Description rdf:about="#G_BSU32490">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029044"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016166"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32145"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -114410,7 +126997,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30830" sboTerm="SBO:0000243" fbc:id="G_BSU30830" fbc:name="G_BSU30830" fbc:label="G_BSU30830">
+      <fbc:geneProduct metaid="G_BSU31990" sboTerm="SBO:0000243" fbc:id="G_BSU31990" fbc:name="G_BSU31990" fbc:label="G_BSU31990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114418,21 +127005,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30830">
+            <rdf:Description rdf:about="#G_BSU31990">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004561"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005801"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10682"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P23973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P45744"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31990" sboTerm="SBO:0000243" fbc:id="G_BSU31990" fbc:name="G_BSU31990" fbc:label="G_BSU31990">
+      <fbc:geneProduct metaid="G_BSU30830" sboTerm="SBO:0000243" fbc:id="G_BSU30830" fbc:name="G_BSU30830" fbc:label="G_BSU30830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114440,21 +127027,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31990">
+            <rdf:Description rdf:about="#G_BSU30830">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004561"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005801"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11242"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P45744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P23973"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05070" sboTerm="SBO:0000243" fbc:id="G_BSU05070" fbc:name="G_BSU05070" fbc:label="G_BSU05070">
+      <fbc:geneProduct metaid="G_BSU31970" sboTerm="SBO:0000243" fbc:id="G_BSU31970" fbc:name="G_BSU31970" fbc:label="G_BSU31970">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114462,19 +127049,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05070">
+            <rdf:Description rdf:about="#G_BSU31970">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181N3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181N3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P45743"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31970" sboTerm="SBO:0000243" fbc:id="G_BSU31970" fbc:name="G_BSU31970" fbc:label="G_BSU31970">
+      <fbc:geneProduct metaid="G_BSU05070" sboTerm="SBO:0000243" fbc:id="G_BSU05070" fbc:name="G_BSU05070" fbc:label="G_BSU05070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114482,14 +127071,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31970">
+            <rdf:Description rdf:about="#G_BSU05070">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016291"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11241"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P45743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181N3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181N3"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -114653,7 +127240,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU26690" sboTerm="SBO:0000243" fbc:id="G_BSU26690" fbc:name="G_BSU26690" fbc:label="G_BSU26690">
+      <fbc:geneProduct metaid="G_BSU26710" sboTerm="SBO:0000243" fbc:id="G_BSU26710" fbc:name="G_BSU26710" fbc:label="G_BSU26710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114661,19 +127248,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU26690">
+            <rdf:Description rdf:about="#G_BSU26710">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11918"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07942"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU26700" sboTerm="SBO:0000243" fbc:id="G_BSU26700" fbc:name="G_BSU26700" fbc:label="G_BSU26700">
+      <fbc:geneProduct metaid="G_BSU26690" sboTerm="SBO:0000243" fbc:id="G_BSU26690" fbc:name="G_BSU26690" fbc:label="G_BSU26690">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114681,19 +127269,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU26700">
+            <rdf:Description rdf:about="#G_BSU26690">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008407"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94499"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29600" sboTerm="SBO:0000243" fbc:id="G_BSU29600" fbc:name="G_BSU29600" fbc:label="G_BSU29600">
+      <fbc:geneProduct metaid="G_BSU26700" sboTerm="SBO:0000243" fbc:id="G_BSU26700" fbc:name="G_BSU26700" fbc:label="G_BSU26700">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114701,19 +127289,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29600">
+            <rdf:Description rdf:about="#G_BSU26700">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07923"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU26710" sboTerm="SBO:0000243" fbc:id="G_BSU26710" fbc:name="G_BSU26710" fbc:label="G_BSU26710">
+      <fbc:geneProduct metaid="G_BSU29600" sboTerm="SBO:0000243" fbc:id="G_BSU29600" fbc:name="G_BSU29600" fbc:label="G_BSU29600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114721,13 +127309,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU26710">
+            <rdf:Description rdf:about="#G_BSU29600">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004471"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07942"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34545"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -114790,6 +127377,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU30100" sboTerm="SBO:0000243" fbc:id="G_BSU30100" fbc:name="G_BSU30100" fbc:label="G_BSU30100">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU39700" sboTerm="SBO:0000243" fbc:id="G_BSU39700" fbc:name="G_BSU39700" fbc:label="G_BSU39700">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114829,37 +127423,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30100" sboTerm="SBO:0000243" fbc:id="G_BSU30100" fbc:name="G_BSU30100" fbc:label="G_BSU30100">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39750" sboTerm="SBO:0000243" fbc:id="G_BSU39750" fbc:name="G_BSU39750" fbc:label="G_BSU39750">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39750">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR021120"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023770"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11118"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42413"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU39730" sboTerm="SBO:0000243" fbc:id="G_BSU39730" fbc:name="G_BSU39730" fbc:label="G_BSU39730">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114886,7 +127449,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU39720" sboTerm="SBO:0000243" fbc:id="G_BSU39720" fbc:name="G_BSU39720" fbc:label="G_BSU39720">
+      <fbc:geneProduct metaid="G_BSU39750" sboTerm="SBO:0000243" fbc:id="G_BSU39750" fbc:name="G_BSU39750" fbc:label="G_BSU39750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -114894,13 +127457,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU39720">
+            <rdf:Description rdf:about="#G_BSU39750">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR021120"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023770"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42413"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -114930,6 +127496,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU39720" sboTerm="SBO:0000243" fbc:id="G_BSU39720" fbc:name="G_BSU39720" fbc:label="G_BSU39720">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU39720">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42416"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU06230" sboTerm="SBO:0000243" fbc:id="G_BSU06230" fbc:name="G_BSU06230" fbc:label="G_BSU06230">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115167,7 +127754,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10170" sboTerm="SBO:0000243" fbc:id="G_BSU10170" fbc:name="G_BSU10170" fbc:label="G_BSU10170">
+      <fbc:geneProduct metaid="G_BSU04030" sboTerm="SBO:0000243" fbc:id="G_BSU04030" fbc:name="G_BSU04030" fbc:label="G_BSU04030">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115175,23 +127762,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU10170">
+            <rdf:Description rdf:about="#G_BSU04030">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013751"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11225"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU04030" sboTerm="SBO:0000243" fbc:id="G_BSU04030" fbc:name="G_BSU04030" fbc:label="G_BSU04030">
+      <fbc:geneProduct metaid="G_BSU15900" sboTerm="SBO:0000243" fbc:id="G_BSU15900" fbc:name="G_BSU15900" fbc:label="G_BSU15900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115199,19 +127782,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU04030">
+            <rdf:Description rdf:about="#G_BSU15900">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014043"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016036"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024925"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P71019"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11330" sboTerm="SBO:0000243" fbc:id="G_BSU11330" fbc:name="G_BSU11330" fbc:label="G_BSU11330">
+      <fbc:geneProduct metaid="G_BSU15910" sboTerm="SBO:0000243" fbc:id="G_BSU15910" fbc:name="G_BSU15910" fbc:label="G_BSU15910">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115219,23 +127807,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11330">
+            <rdf:Description rdf:about="#G_BSU15910">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013751"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13127"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P51831"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15910" sboTerm="SBO:0000243" fbc:id="G_BSU15910" fbc:name="G_BSU15910" fbc:label="G_BSU15910">
+      <fbc:geneProduct metaid="G_BSU08650" sboTerm="SBO:0000243" fbc:id="G_BSU08650" fbc:name="G_BSU08650" fbc:label="G_BSU08650">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115243,22 +127830,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15910">
+            <rdf:Description rdf:about="#G_BSU08650">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P51831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OIC"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OID"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P71079"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11340" sboTerm="SBO:0000243" fbc:id="G_BSU11340" fbc:name="G_BSU11340" fbc:label="G_BSU11340">
+      <fbc:geneProduct metaid="G_BSU36370" sboTerm="SBO:0000243" fbc:id="G_BSU36370" fbc:name="G_BSU36370" fbc:label="G_BSU36370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115266,28 +127854,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11340">
+            <rdf:Description rdf:about="#G_BSU36370">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017568"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94584"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08650" sboTerm="SBO:0000243" fbc:id="G_BSU08650" fbc:name="G_BSU08650" fbc:label="G_BSU08650">
+      <fbc:geneProduct metaid="G_BSU11330" sboTerm="SBO:0000243" fbc:id="G_BSU11330" fbc:name="G_BSU11330" fbc:label="G_BSU11330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115295,23 +127876,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08650">
+            <rdf:Description rdf:about="#G_BSU11330">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12221"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OIC"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OID"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P71079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013751"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34746"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15900" sboTerm="SBO:0000243" fbc:id="G_BSU15900" fbc:name="G_BSU15900" fbc:label="G_BSU15900">
+      <fbc:geneProduct metaid="G_BSU10170" sboTerm="SBO:0000243" fbc:id="G_BSU10170" fbc:name="G_BSU10170" fbc:label="G_BSU10170">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115319,24 +127900,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15900">
+            <rdf:Description rdf:about="#G_BSU10170">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001227"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004410"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014043"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016035"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016036"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024925"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P71019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013751"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07600"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU36370" sboTerm="SBO:0000243" fbc:id="G_BSU36370" fbc:name="G_BSU36370" fbc:label="G_BSU36370">
+      <fbc:geneProduct metaid="G_BSU11340" sboTerm="SBO:0000243" fbc:id="G_BSU11340" fbc:name="G_BSU11340" fbc:label="G_BSU11340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115344,14 +127924,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU36370">
+            <rdf:Description rdf:about="#G_BSU11340">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12496"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4LS8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34340"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -115432,28 +128019,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU26640" sboTerm="SBO:0000243" fbc:id="G_BSU26640" fbc:name="G_BSU26640" fbc:label="G_BSU26640">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU26640">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11980"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07085"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31090" sboTerm="SBO:0000243" fbc:id="G_BSU31090" fbc:name="G_BSU31090" fbc:label="G_BSU31090">
+      <fbc:geneProduct metaid="G_BSU14510" sboTerm="SBO:0000243" fbc:id="G_BSU14510" fbc:name="G_BSU14510" fbc:label="G_BSU14510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115461,30 +128027,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31090">
+            <rdf:Description rdf:about="#G_BSU14510">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006037"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13943"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1LSU"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMS"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMT"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMU"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMV"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMW"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J7C"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J90"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J91"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39760"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31100" sboTerm="SBO:0000243" fbc:id="G_BSU31100" fbc:name="G_BSU31100" fbc:label="G_BSU31100">
+      <fbc:geneProduct metaid="G_BSU13500" sboTerm="SBO:0000243" fbc:id="G_BSU13500" fbc:name="G_BSU13500" fbc:label="G_BSU13500">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115492,21 +128049,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31100">
+            <rdf:Description rdf:about="#G_BSU13500">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003445"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004772"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13956"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J7C"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31658"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13500" sboTerm="SBO:0000243" fbc:id="G_BSU13500" fbc:name="G_BSU13500" fbc:label="G_BSU13500">
+      <fbc:geneProduct metaid="G_BSU31090" sboTerm="SBO:0000243" fbc:id="G_BSU31090" fbc:name="G_BSU31090" fbc:label="G_BSU31090">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115514,19 +128069,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU13500">
+            <rdf:Description rdf:about="#G_BSU31090">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003445"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13275"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13943"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1LSU"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMS"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMT"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMU"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMV"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HMW"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J7C"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J90"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J91"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32080"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14510" sboTerm="SBO:0000243" fbc:id="G_BSU14510" fbc:name="G_BSU14510" fbc:label="G_BSU14510">
+      <fbc:geneProduct metaid="G_BSU26640" sboTerm="SBO:0000243" fbc:id="G_BSU26640" fbc:name="G_BSU26640" fbc:label="G_BSU26640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115534,21 +128100,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14510">
+            <rdf:Description rdf:about="#G_BSU26640">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006037"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39760"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07085"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31650" sboTerm="SBO:0000243" fbc:id="G_BSU31650" fbc:name="G_BSU31650" fbc:label="G_BSU31650">
+      <fbc:geneProduct metaid="G_BSU31100" sboTerm="SBO:0000243" fbc:id="G_BSU31100" fbc:name="G_BSU31100" fbc:label="G_BSU31100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115556,19 +128121,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31650">
+            <rdf:Description rdf:about="#G_BSU31100">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05228"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4J7C"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32081"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31620" sboTerm="SBO:0000243" fbc:id="G_BSU31620" fbc:name="G_BSU31620" fbc:label="G_BSU31620">
+      <fbc:geneProduct metaid="G_BSU31630" sboTerm="SBO:0000243" fbc:id="G_BSU31630" fbc:name="G_BSU31630" fbc:label="G_BSU31630">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115576,12 +128143,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31620">
+            <rdf:Description rdf:about="#G_BSU31630">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12357"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05229"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -115609,7 +128178,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31630" sboTerm="SBO:0000243" fbc:id="G_BSU31630" fbc:name="G_BSU31630" fbc:label="G_BSU31630">
+      <fbc:geneProduct metaid="G_BSU31620" sboTerm="SBO:0000243" fbc:id="G_BSU31620" fbc:name="G_BSU31620" fbc:label="G_BSU31620">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115617,14 +128186,32 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31630">
+            <rdf:Description rdf:about="#G_BSU31620">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003918"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004775"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12345"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001133"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05260"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU31650" sboTerm="SBO:0000243" fbc:id="G_BSU31650" fbc:name="G_BSU31650" fbc:label="G_BSU31650">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU31650">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05228"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -115745,7 +128332,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34130" sboTerm="SBO:0000243" fbc:id="G_BSU34130" fbc:name="G_BSU34130" fbc:label="G_BSU34130">
+      <fbc:geneProduct metaid="G_BSU07080" sboTerm="SBO:0000243" fbc:id="G_BSU07080" fbc:name="G_BSU07080" fbc:label="G_BSU07080">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115753,25 +128340,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#G_BSU34130">
+            <rdf:Description rdf:about="#G_BSU07080">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003476"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013529"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013738"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013739"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013781"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017853"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898289"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU07080" sboTerm="SBO:0000243" fbc:id="G_BSU07080" fbc:name="G_BSU07080" fbc:label="G_BSU07080">
+      <fbc:geneProduct metaid="G_BSU34130" sboTerm="SBO:0000243" fbc:id="G_BSU34130" fbc:name="G_BSU34130" fbc:label="G_BSU34130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115779,17 +128358,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU07080">
+            <rdf:Description rdf:about="#G_BSU34130">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013738"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013739"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07012"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06990" sboTerm="SBO:0000243" fbc:id="G_BSU06990" fbc:name="G_BSU06990" fbc:label="G_BSU06990">
+      <fbc:geneProduct metaid="G_BSU06980" sboTerm="SBO:0000243" fbc:id="G_BSU06980" fbc:name="G_BSU06980" fbc:label="G_BSU06980">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115797,12 +128384,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU06990">
+            <rdf:Description rdf:about="#G_BSU06980">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31519"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -115830,7 +128417,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06980" sboTerm="SBO:0000243" fbc:id="G_BSU06980" fbc:name="G_BSU06980" fbc:label="G_BSU06980">
+      <fbc:geneProduct metaid="G_BSU06990" sboTerm="SBO:0000243" fbc:id="G_BSU06990" fbc:name="G_BSU06990" fbc:label="G_BSU06990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115838,12 +128425,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU06980">
+            <rdf:Description rdf:about="#G_BSU06990">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31520"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -115935,7 +128522,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38510" sboTerm="SBO:0000243" fbc:id="G_BSU38510" fbc:name="G_BSU38510" fbc:label="G_BSU38510">
+      <fbc:geneProduct metaid="G_BSU38530" sboTerm="SBO:0000243" fbc:id="G_BSU38530" fbc:name="G_BSU38530" fbc:label="G_BSU38530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115943,21 +128530,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38510">
+            <rdf:Description rdf:about="#G_BSU38530">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004299"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024024"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10550"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39578"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38520" sboTerm="SBO:0000243" fbc:id="G_BSU38520" fbc:name="G_BSU38520" fbc:label="G_BSU38520">
+      <fbc:geneProduct metaid="G_BSU38500" sboTerm="SBO:0000243" fbc:id="G_BSU38500" fbc:name="G_BSU38500" fbc:label="G_BSU38500">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115965,23 +128553,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38520">
+            <rdf:Description rdf:about="#G_BSU38500">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4BPF"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4BPG"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4BPH"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3E7W"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3E7X"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39581"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38500" sboTerm="SBO:0000243" fbc:id="G_BSU38500" fbc:name="G_BSU38500" fbc:label="G_BSU38500">
+      <fbc:geneProduct metaid="G_BSU38510" sboTerm="SBO:0000243" fbc:id="G_BSU38510" fbc:name="G_BSU38510" fbc:label="G_BSU38510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -115989,25 +128579,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38500">
+            <rdf:Description rdf:about="#G_BSU38510">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000873"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010071"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010072"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020845"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3E7W"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3E7X"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39580"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU38530" sboTerm="SBO:0000243" fbc:id="G_BSU38530" fbc:name="G_BSU38530" fbc:label="G_BSU38530">
+      <fbc:geneProduct metaid="G_BSU38520" sboTerm="SBO:0000243" fbc:id="G_BSU38520" fbc:name="G_BSU38520" fbc:label="G_BSU38520">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116015,15 +128601,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU38530">
+            <rdf:Description rdf:about="#G_BSU38520">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006998"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006999"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10548"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4BPF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4BPG"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4BPH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39579"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -116103,7 +128690,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34040" sboTerm="SBO:0000243" fbc:id="G_BSU34040" fbc:name="G_BSU34040" fbc:label="G_BSU34040">
+      <fbc:geneProduct metaid="G_BSU34050" sboTerm="SBO:0000243" fbc:id="G_BSU34050" fbc:name="G_BSU34050" fbc:label="G_BSU34050">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116111,20 +128698,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34040">
+            <rdf:Description rdf:about="#G_BSU34050">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001060"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944980"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13582"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34050" sboTerm="SBO:0000243" fbc:id="G_BSU34050" fbc:name="G_BSU34050" fbc:label="G_BSU34050">
+      <fbc:geneProduct metaid="G_BSU34030" sboTerm="SBO:0000243" fbc:id="G_BSU34030" fbc:name="G_BSU34030" fbc:label="G_BSU34030">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116132,20 +128719,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34050">
+            <rdf:Description rdf:about="#G_BSU34030">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77252"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948438"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13584"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34030" sboTerm="SBO:0000243" fbc:id="G_BSU34030" fbc:name="G_BSU34030" fbc:label="G_BSU34030">
+      <fbc:geneProduct metaid="G_BSU34040" sboTerm="SBO:0000243" fbc:id="G_BSU34040" fbc:name="G_BSU34040" fbc:label="G_BSU34040">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116153,13 +128740,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34030">
+            <rdf:Description rdf:about="#G_BSU34040">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13583"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -116302,7 +128889,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30290" sboTerm="SBO:0000243" fbc:id="G_BSU30290" fbc:name="G_BSU30290" fbc:label="G_BSU30290">
+      <fbc:geneProduct metaid="G_BSU30280" sboTerm="SBO:0000243" fbc:id="G_BSU30280" fbc:name="G_BSU30280" fbc:label="G_BSU30280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116310,19 +128897,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30290">
+            <rdf:Description rdf:about="#G_BSU30280">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12564"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34518"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12565"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34706"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34160" sboTerm="SBO:0000243" fbc:id="G_BSU34160" fbc:name="G_BSU34160" fbc:label="G_BSU34160">
+      <fbc:geneProduct metaid="G_BSU34600" sboTerm="SBO:0000243" fbc:id="G_BSU34600" fbc:name="G_BSU34600" fbc:label="G_BSU34600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116330,20 +128917,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34160">
+            <rdf:Description rdf:about="#G_BSU34600">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006060"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12436"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O06990"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30270" sboTerm="SBO:0000243" fbc:id="G_BSU30270" fbc:name="G_BSU30270" fbc:label="G_BSU30270">
+      <fbc:geneProduct metaid="G_BSU34160" sboTerm="SBO:0000243" fbc:id="G_BSU34160" fbc:name="G_BSU34160" fbc:label="G_BSU34160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116351,13 +128937,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30270">
+            <rdf:Description rdf:about="#G_BSU34160">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12625"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4R6H"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07009"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -116385,7 +128971,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34140" sboTerm="SBO:0000243" fbc:id="G_BSU34140" fbc:name="G_BSU34140" fbc:label="G_BSU34140">
+      <fbc:geneProduct metaid="G_BSU34590" sboTerm="SBO:0000243" fbc:id="G_BSU34590" fbc:name="G_BSU34590" fbc:label="G_BSU34590">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116393,19 +128979,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34140">
+            <rdf:Description rdf:about="#G_BSU34590">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12438"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O06991"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30280" sboTerm="SBO:0000243" fbc:id="G_BSU30280" fbc:name="G_BSU30280" fbc:label="G_BSU30280">
+      <fbc:geneProduct metaid="G_BSU30270" sboTerm="SBO:0000243" fbc:id="G_BSU30270" fbc:name="G_BSU30270" fbc:label="G_BSU30270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116413,19 +128999,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30280">
+            <rdf:Description rdf:about="#G_BSU30270">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12565"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4R6H"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34335"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34590" sboTerm="SBO:0000243" fbc:id="G_BSU34590" fbc:name="G_BSU34590" fbc:label="G_BSU34590">
+      <fbc:geneProduct metaid="G_BSU30290" sboTerm="SBO:0000243" fbc:id="G_BSU30290" fbc:name="G_BSU30290" fbc:label="G_BSU30290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116433,19 +129020,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34590">
+            <rdf:Description rdf:about="#G_BSU30290">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12418"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O06991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34518"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34600" sboTerm="SBO:0000243" fbc:id="G_BSU34600" fbc:name="G_BSU34600" fbc:label="G_BSU34600">
+      <fbc:geneProduct metaid="G_BSU34150" sboTerm="SBO:0000243" fbc:id="G_BSU34150" fbc:name="G_BSU34150" fbc:label="G_BSU34150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116453,19 +129040,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34600">
+            <rdf:Description rdf:about="#G_BSU34150">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O06990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32261"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34150" sboTerm="SBO:0000243" fbc:id="G_BSU34150" fbc:name="G_BSU34150" fbc:label="G_BSU34150">
+      <fbc:geneProduct metaid="G_BSU34140" sboTerm="SBO:0000243" fbc:id="G_BSU34140" fbc:name="G_BSU34140" fbc:label="G_BSU34140">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116473,13 +129061,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34150">
+            <rdf:Description rdf:about="#G_BSU34140">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12437"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07011"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -116577,7 +129164,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU12020" sboTerm="SBO:0000243" fbc:id="G_BSU12020" fbc:name="G_BSU12020" fbc:label="G_BSU12020">
+      <fbc:geneProduct metaid="G_BSU05870" sboTerm="SBO:0000243" fbc:id="G_BSU05870" fbc:name="G_BSU05870" fbc:label="G_BSU05870">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116585,22 +129172,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU12020">
+            <rdf:Description rdf:about="#G_BSU05870">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001250"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011051"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014628"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13177"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182H9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182H9"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05870" sboTerm="SBO:0000243" fbc:id="G_BSU05870" fbc:name="G_BSU05870" fbc:label="G_BSU05870">
+      <fbc:geneProduct metaid="G_BSU12020" sboTerm="SBO:0000243" fbc:id="G_BSU12020" fbc:name="G_BSU12020" fbc:label="G_BSU12020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116608,15 +129195,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05870">
+            <rdf:Description rdf:about="#G_BSU12020">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001250"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011051"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014628"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182H9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182H9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31646"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -116762,6 +129349,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU38950" sboTerm="SBO:0000243" fbc:id="G_BSU38950" fbc:name="G_BSU38950" fbc:label="G_BSU38950">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU27310" sboTerm="SBO:0000243" fbc:id="G_BSU27310" fbc:name="G_BSU27310" fbc:label="G_BSU27310">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -116811,7 +129405,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18350" sboTerm="SBO:0000243" fbc:id="G_BSU18350" fbc:name="G_BSU18350" fbc:label="G_BSU18350">
+      <fbc:geneProduct metaid="G_BSU00100" sboTerm="SBO:0000243" fbc:id="G_BSU00100" fbc:name="G_BSU00100" fbc:label="G_BSU00100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116819,22 +129413,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18350">
+            <rdf:Description rdf:about="#G_BSU00100">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKJ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08506"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10203"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU00100" sboTerm="SBO:0000243" fbc:id="G_BSU00100" fbc:name="G_BSU00100" fbc:label="G_BSU00100">
+      <fbc:geneProduct metaid="G_BSU18350" sboTerm="SBO:0000243" fbc:id="G_BSU18350" fbc:name="G_BSU18350" fbc:label="G_BSU18350">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -116842,15 +129436,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU00100">
+            <rdf:Description rdf:about="#G_BSU18350">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08506"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945455"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176325"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117053,7 +129647,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29350" sboTerm="SBO:0000243" fbc:id="G_BSU29350" fbc:name="G_BSU29350" fbc:label="G_BSU29350">
+      <fbc:geneProduct metaid="G_BSU29360" sboTerm="SBO:0000243" fbc:id="G_BSU29360" fbc:name="G_BSU29360" fbc:label="G_BSU29360">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117061,20 +129655,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29350">
+            <rdf:Description rdf:about="#G_BSU29360">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13887"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34315"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32750" sboTerm="SBO:0000243" fbc:id="G_BSU32750" fbc:name="G_BSU32750" fbc:label="G_BSU32750">
+      <fbc:geneProduct metaid="G_BSU29350" sboTerm="SBO:0000243" fbc:id="G_BSU29350" fbc:name="G_BSU29350" fbc:label="G_BSU29350">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117082,25 +129676,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32750">
+            <rdf:Description rdf:about="#G_BSU29350">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018449"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026253"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34931"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32730" sboTerm="SBO:0000243" fbc:id="G_BSU32730" fbc:name="G_BSU32730" fbc:label="G_BSU32730">
+      <fbc:geneProduct metaid="G_BSU09110" sboTerm="SBO:0000243" fbc:id="G_BSU09110" fbc:name="G_BSU09110" fbc:label="G_BSU09110">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU32750" sboTerm="SBO:0000243" fbc:id="G_BSU32750" fbc:name="G_BSU32750" fbc:label="G_BSU32750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117108,20 +129704,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32730">
+            <rdf:Description rdf:about="#G_BSU32750">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4GOT"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32169"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29360" sboTerm="SBO:0000243" fbc:id="G_BSU29360" fbc:name="G_BSU29360" fbc:label="G_BSU29360">
+      <fbc:geneProduct metaid="G_BSU35260" sboTerm="SBO:0000243" fbc:id="G_BSU35260" fbc:name="G_BSU35260" fbc:label="G_BSU35260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117129,27 +129730,38 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29360">
+            <rdf:Description rdf:about="#G_BSU35260">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18C09"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHX1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173914"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09110" sboTerm="SBO:0000243" fbc:id="G_BSU09110" fbc:name="G_BSU09110" fbc:label="G_BSU09110">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32740" sboTerm="SBO:0000243" fbc:id="G_BSU32740" fbc:name="G_BSU32740" fbc:label="G_BSU32740">
+      <fbc:geneProduct metaid="G_BSU29380" sboTerm="SBO:0000243" fbc:id="G_BSU29380" fbc:name="G_BSU29380" fbc:label="G_BSU29380">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117157,19 +129769,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32740">
+            <rdf:Description rdf:about="#G_BSU29380">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13884"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34406"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29380" sboTerm="SBO:0000243" fbc:id="G_BSU29380" fbc:name="G_BSU29380" fbc:label="G_BSU29380">
+      <fbc:geneProduct metaid="G_BSU29370" sboTerm="SBO:0000243" fbc:id="G_BSU29370" fbc:name="G_BSU29370" fbc:label="G_BSU29370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117177,19 +129789,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29380">
+            <rdf:Description rdf:about="#G_BSU29370">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13884"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2O1M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34852"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35260" sboTerm="SBO:0000243" fbc:id="G_BSU35260" fbc:name="G_BSU35260" fbc:label="G_BSU35260">
+      <fbc:geneProduct metaid="G_BSU32740" sboTerm="SBO:0000243" fbc:id="G_BSU32740" fbc:name="G_BSU32740" fbc:label="G_BSU32740">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117197,38 +129810,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35260">
+            <rdf:Description rdf:about="#G_BSU32740">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018449"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026253"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18C09"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000671"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHX1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32168"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29370" sboTerm="SBO:0000243" fbc:id="G_BSU29370" fbc:name="G_BSU29370" fbc:label="G_BSU29370">
+      <fbc:geneProduct metaid="G_BSU32730" sboTerm="SBO:0000243" fbc:id="G_BSU32730" fbc:name="G_BSU32730" fbc:label="G_BSU32730">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117236,13 +129830,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29370">
+            <rdf:Description rdf:about="#G_BSU32730">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13885"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2O1M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34852"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4GOT"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32167"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117313,7 +129907,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29640" sboTerm="SBO:0000243" fbc:id="G_BSU29640" fbc:name="G_BSU29640" fbc:label="G_BSU29640">
+      <fbc:geneProduct metaid="G_BSU18010" sboTerm="SBO:0000243" fbc:id="G_BSU18010" fbc:name="G_BSU18010" fbc:label="G_BSU18010">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117321,22 +129915,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU29640">
+            <rdf:Description rdf:about="#G_BSU18010">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKZ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176707"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18010" sboTerm="SBO:0000243" fbc:id="G_BSU18010" fbc:name="G_BSU18010" fbc:label="G_BSU18010">
+      <fbc:geneProduct metaid="G_BSU29640" sboTerm="SBO:0000243" fbc:id="G_BSU29640" fbc:name="G_BSU29640" fbc:label="G_BSU29640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117344,21 +129944,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18010">
+            <rdf:Description rdf:about="#G_BSU29640">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012357"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA25"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948289"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013766"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKZ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14020"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117452,7 +130046,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08000" sboTerm="SBO:0000243" fbc:id="G_BSU08000" fbc:name="G_BSU08000" fbc:label="G_BSU08000">
+      <fbc:geneProduct metaid="G_BSU13300" sboTerm="SBO:0000243" fbc:id="G_BSU13300" fbc:name="G_BSU13300" fbc:label="G_BSU13300">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117460,20 +130054,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08000">
+            <rdf:Description rdf:about="#G_BSU13300">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002523"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004488"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34442"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13300" sboTerm="SBO:0000243" fbc:id="G_BSU13300" fbc:name="G_BSU13300" fbc:label="G_BSU13300">
+      <fbc:geneProduct metaid="G_BSU08000" sboTerm="SBO:0000243" fbc:id="G_BSU08000" fbc:name="G_BSU08000" fbc:label="G_BSU08000">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117481,15 +130077,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU13300">
+            <rdf:Description rdf:about="#G_BSU08000">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006668"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006669"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34442"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31543"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117543,13 +130137,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29530" sboTerm="SBO:0000243" fbc:id="G_BSU29530" fbc:name="G_BSU29530" fbc:label="G_BSU29530">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU16860" sboTerm="SBO:0000243" fbc:id="G_BSU16860" fbc:name="G_BSU16860" fbc:label="G_BSU16860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117570,6 +130157,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU29530" sboTerm="SBO:0000243" fbc:id="G_BSU29530" fbc:name="G_BSU29530" fbc:label="G_BSU29530">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU13789" sboTerm="SBO:0000243" fbc:id="G_BSU13789" fbc:name="G_BSU13789" fbc:label="G_BSU13789">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117653,6 +130247,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU03982" sboTerm="SBO:0000243" fbc:id="G_BSU03982" fbc:name="G_BSU03982" fbc:label="G_BSU03982">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03981" sboTerm="SBO:0000243" fbc:id="G_BSU03981" fbc:name="G_BSU03981" fbc:label="G_BSU03981">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117678,13 +130279,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03982" sboTerm="SBO:0000243" fbc:id="G_BSU03982" fbc:name="G_BSU03982" fbc:label="G_BSU03982">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU12340" sboTerm="SBO:0000243" fbc:id="G_BSU12340" fbc:name="G_BSU12340" fbc:label="G_BSU12340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117706,7 +130300,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30760" sboTerm="SBO:0000243" fbc:id="G_BSU30760" fbc:name="G_BSU30760" fbc:label="G_BSU30760">
+      <fbc:geneProduct metaid="G_BSU35160" sboTerm="SBO:0000243" fbc:id="G_BSU35160" fbc:name="G_BSU35160" fbc:label="G_BSU35160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117714,15 +130308,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30760">
+            <rdf:Description rdf:about="#G_BSU35160">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13852"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q17ZT9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q17ZT9"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117771,7 +130364,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU30770" sboTerm="SBO:0000243" fbc:id="G_BSU30770" fbc:name="G_BSU30770" fbc:label="G_BSU30770">
+      <fbc:geneProduct metaid="G_BSU30760" sboTerm="SBO:0000243" fbc:id="G_BSU30760" fbc:name="G_BSU30760" fbc:label="G_BSU30760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117779,21 +130372,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU30770">
+            <rdf:Description rdf:about="#G_BSU30760">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006127"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13852"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34338"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35160" sboTerm="SBO:0000243" fbc:id="G_BSU35160" fbc:name="G_BSU35160" fbc:label="G_BSU35160">
+      <fbc:geneProduct metaid="G_BSU30770" sboTerm="SBO:0000243" fbc:id="G_BSU30770" fbc:name="G_BSU30770" fbc:label="G_BSU30770">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117801,14 +130395,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35160">
+            <rdf:Description rdf:about="#G_BSU30770">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q17ZT9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q17ZT9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34385"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117857,7 +130451,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33390" sboTerm="SBO:0000243" fbc:id="G_BSU33390" fbc:name="G_BSU33390" fbc:label="G_BSU33390">
+      <fbc:geneProduct metaid="G_BSU33380" sboTerm="SBO:0000243" fbc:id="G_BSU33380" fbc:name="G_BSU33380" fbc:label="G_BSU33380">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117865,20 +130459,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33390">
+            <rdf:Description rdf:about="#G_BSU33380">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011867"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32208"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33380" sboTerm="SBO:0000243" fbc:id="G_BSU33380" fbc:name="G_BSU33380" fbc:label="G_BSU33380">
+      <fbc:geneProduct metaid="G_BSU33390" sboTerm="SBO:0000243" fbc:id="G_BSU33390" fbc:name="G_BSU33390" fbc:label="G_BSU33390">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -117886,13 +130480,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33380">
+            <rdf:Description rdf:about="#G_BSU33390">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32209"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -117953,20 +130547,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37510" sboTerm="SBO:0000243" fbc:id="G_BSU37510" fbc:name="G_BSU37510" fbc:label="G_BSU37510">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15170" sboTerm="SBO:0000243" fbc:id="G_BSU15170" fbc:name="G_BSU15170" fbc:label="G_BSU15170">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15210" sboTerm="SBO:0000243" fbc:id="G_BSU15210" fbc:name="G_BSU15210" fbc:label="G_BSU15210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117990,6 +130570,20 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU37510" sboTerm="SBO:0000243" fbc:id="G_BSU37510" fbc:name="G_BSU37510" fbc:label="G_BSU37510">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU15170" sboTerm="SBO:0000243" fbc:id="G_BSU15170" fbc:name="G_BSU15170" fbc:label="G_BSU15170">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU24310" sboTerm="SBO:0000243" fbc:id="G_BSU24310" fbc:name="G_BSU24310" fbc:label="G_BSU24310">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118096,7 +130690,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU26470" sboTerm="SBO:0000243" fbc:id="G_BSU26470" fbc:name="G_BSU26470" fbc:label="G_BSU26470">
+      <fbc:geneProduct metaid="G_BSU09020" sboTerm="SBO:0000243" fbc:id="G_BSU09020" fbc:name="G_BSU09020" fbc:label="G_BSU09020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118104,20 +130698,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU26470">
+            <rdf:Description rdf:about="#G_BSU09020">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000159"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A754"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944767"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8G6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11540"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09020" sboTerm="SBO:0000243" fbc:id="G_BSU09020" fbc:name="G_BSU09020" fbc:label="G_BSU09020">
+      <fbc:geneProduct metaid="G_BSU26470" sboTerm="SBO:0000243" fbc:id="G_BSU26470" fbc:name="G_BSU26470" fbc:label="G_BSU26470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118125,13 +130719,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU09020">
+            <rdf:Description rdf:about="#G_BSU26470">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8G6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A754"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11568"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -118204,7 +130798,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU40100" sboTerm="SBO:0000243" fbc:id="G_BSU40100" fbc:name="G_BSU40100" fbc:label="G_BSU40100">
+      <fbc:geneProduct metaid="G_BSU40090" sboTerm="SBO:0000243" fbc:id="G_BSU40090" fbc:name="G_BSU40090" fbc:label="G_BSU40090">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118212,22 +130806,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU40100">
+            <rdf:Description rdf:about="#G_BSU40090">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P35340"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947540"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE08"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11384"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU40090" sboTerm="SBO:0000243" fbc:id="G_BSU40090" fbc:name="G_BSU40090" fbc:label="G_BSU40090">
+      <fbc:geneProduct metaid="G_BSU40100" sboTerm="SBO:0000243" fbc:id="G_BSU40100" fbc:name="G_BSU40100" fbc:label="G_BSU40100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118235,15 +130829,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU40090">
+            <rdf:Description rdf:about="#G_BSU40100">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE08"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P35340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11385"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -118271,6 +130865,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU29540" sboTerm="SBO:0000243" fbc:id="G_BSU29540" fbc:name="G_BSU29540" fbc:label="G_BSU29540">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU11610" sboTerm="SBO:0000243" fbc:id="G_BSU11610" fbc:name="G_BSU11610" fbc:label="G_BSU11610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118294,13 +130895,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU29540" sboTerm="SBO:0000243" fbc:id="G_BSU29540" fbc:name="G_BSU29540" fbc:label="G_BSU29540">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU18430" sboTerm="SBO:0000243" fbc:id="G_BSU18430" fbc:name="G_BSU18430" fbc:label="G_BSU18430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118394,25 +130988,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02760" sboTerm="SBO:0000243" fbc:id="G_BSU02760" fbc:name="G_BSU02760" fbc:label="G_BSU02760">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02760">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46904"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU02750" sboTerm="SBO:0000243" fbc:id="G_BSU02750" fbc:name="G_BSU02750" fbc:label="G_BSU02750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118436,50 +131011,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31640" sboTerm="SBO:0000243" fbc:id="G_BSU31640" fbc:name="G_BSU31640" fbc:label="G_BSU31640">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31640">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002758"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14181"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q7WY60"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU11640" sboTerm="SBO:0000243" fbc:id="G_BSU11640" fbc:name="G_BSU11640" fbc:label="G_BSU11640">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU11640">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006037"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13146"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31615"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU09850" sboTerm="SBO:0000243" fbc:id="G_BSU09850" fbc:name="G_BSU09850" fbc:label="G_BSU09850">
+      <fbc:geneProduct metaid="G_BSU02760" sboTerm="SBO:0000243" fbc:id="G_BSU02760" fbc:name="G_BSU02760" fbc:label="G_BSU02760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118487,19 +131019,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU09850">
+            <rdf:Description rdf:about="#G_BSU02760">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O07536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46904"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33420" sboTerm="SBO:0000243" fbc:id="G_BSU33420" fbc:name="G_BSU33420" fbc:label="G_BSU33420">
+      <fbc:geneProduct metaid="G_BSU31640" sboTerm="SBO:0000243" fbc:id="G_BSU31640" fbc:name="G_BSU31640" fbc:label="G_BSU31640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118507,14 +131038,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33420">
+            <rdf:Description rdf:about="#G_BSU31640">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004705"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018422"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q7WY60"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -118542,6 +131071,71 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU33420" sboTerm="SBO:0000243" fbc:id="G_BSU33420" fbc:name="G_BSU33420" fbc:label="G_BSU33420">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU33420">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU11640" sboTerm="SBO:0000243" fbc:id="G_BSU11640" fbc:name="G_BSU11640" fbc:label="G_BSU11640">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU11640">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31615"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU09850" sboTerm="SBO:0000243" fbc:id="G_BSU09850" fbc:name="G_BSU09850" fbc:label="G_BSU09850">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU09850">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O07536"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU22730" sboTerm="SBO:0000243" fbc:id="G_BSU22730" fbc:name="G_BSU22730" fbc:label="G_BSU22730">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118663,7 +131257,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU31760" sboTerm="SBO:0000243" fbc:id="G_BSU31760" fbc:name="G_BSU31760" fbc:label="G_BSU31760">
+      <fbc:geneProduct metaid="G_BSU27020" sboTerm="SBO:0000243" fbc:id="G_BSU27020" fbc:name="G_BSU27020" fbc:label="G_BSU27020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118671,19 +131265,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU31760">
+            <rdf:Description rdf:about="#G_BSU27020">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13965"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180K2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180K2"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU00170" sboTerm="SBO:0000243" fbc:id="G_BSU00170" fbc:name="G_BSU00170" fbc:label="G_BSU00170">
+      <fbc:geneProduct metaid="G_BSU31760" sboTerm="SBO:0000243" fbc:id="G_BSU31760" fbc:name="G_BSU31760" fbc:label="G_BSU31760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118691,17 +131286,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU00170">
+            <rdf:Description rdf:about="#G_BSU31760">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32091"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27020" sboTerm="SBO:0000243" fbc:id="G_BSU27020" fbc:name="G_BSU27020" fbc:label="G_BSU27020">
+      <fbc:geneProduct metaid="G_BSU00170" sboTerm="SBO:0000243" fbc:id="G_BSU00170" fbc:name="G_BSU00170" fbc:label="G_BSU00170">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118709,13 +131306,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27020">
+            <rdf:Description rdf:about="#G_BSU00170">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002818"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180K2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180K2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897507"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -118947,7 +131541,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03360" sboTerm="SBO:0000243" fbc:id="G_BSU03360" fbc:name="G_BSU03360" fbc:label="G_BSU03360">
+      <fbc:geneProduct metaid="G_BSU01120" sboTerm="SBO:0000243" fbc:id="G_BSU01120" fbc:name="G_BSU01120" fbc:label="G_BSU01120">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118955,18 +131549,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03360">
+            <rdf:Description rdf:about="#G_BSU01120">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045441"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888240"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU16630" sboTerm="SBO:0000243" fbc:id="G_BSU16630" fbc:name="G_BSU16630" fbc:label="G_BSU16630">
+      <fbc:geneProduct metaid="G_BSU14770" sboTerm="SBO:0000243" fbc:id="G_BSU14770" fbc:name="G_BSU14770" fbc:label="G_BSU14770">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU03360" sboTerm="SBO:0000243" fbc:id="G_BSU03360" fbc:name="G_BSU03360" fbc:label="G_BSU03360">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -118974,38 +131574,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU16630">
+            <rdf:Description rdf:about="#G_BSU03360">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004161"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015191"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182I0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182I0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10942"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045441"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14770" sboTerm="SBO:0000243" fbc:id="G_BSU14770" fbc:name="G_BSU14770" fbc:label="G_BSU14770">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU01130" sboTerm="SBO:0000243" fbc:id="G_BSU01130" fbc:name="G_BSU01130" fbc:label="G_BSU01130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119034,7 +131613,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01120" sboTerm="SBO:0000243" fbc:id="G_BSU01120" fbc:name="G_BSU01120" fbc:label="G_BSU01120">
+      <fbc:geneProduct metaid="G_BSU16630" sboTerm="SBO:0000243" fbc:id="G_BSU16630" fbc:name="G_BSU16630" fbc:label="G_BSU16630">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119042,10 +131621,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01120">
+            <rdf:Description rdf:about="#G_BSU16630">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182I0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182I0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10942"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -119175,7 +131769,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03320" sboTerm="SBO:0000243" fbc:id="G_BSU03320" fbc:name="G_BSU03320" fbc:label="G_BSU03320">
+      <fbc:geneProduct metaid="G_BSU37280" sboTerm="SBO:0000243" fbc:id="G_BSU37280" fbc:name="G_BSU37280" fbc:label="G_BSU37280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119183,26 +131777,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03320">
+            <rdf:Description rdf:about="#G_BSU37280">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005117"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006067"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007419"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42175"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37270" sboTerm="SBO:0000243" fbc:id="G_BSU37270" fbc:name="G_BSU37270" fbc:label="G_BSU37270">
+      <fbc:geneProduct metaid="G_BSU37260" sboTerm="SBO:0000243" fbc:id="G_BSU37260" fbc:name="G_BSU37260" fbc:label="G_BSU37260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119210,21 +131804,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU37270">
+            <rdf:Description rdf:about="#G_BSU37260">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11083"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42178"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03310" sboTerm="SBO:0000243" fbc:id="G_BSU03310" fbc:name="G_BSU03310" fbc:label="G_BSU03310">
+      <fbc:geneProduct metaid="G_BSU03320" sboTerm="SBO:0000243" fbc:id="G_BSU03320" fbc:name="G_BSU03320" fbc:label="G_BSU03320">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119232,24 +131825,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03310">
+            <rdf:Description rdf:about="#G_BSU03320">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027467"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42433"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37280" sboTerm="SBO:0000243" fbc:id="G_BSU37280" fbc:name="G_BSU37280" fbc:label="G_BSU37280">
+      <fbc:geneProduct metaid="G_BSU03310" sboTerm="SBO:0000243" fbc:id="G_BSU03310" fbc:name="G_BSU03310" fbc:label="G_BSU03310">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119257,19 +131852,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU37280">
+            <rdf:Description rdf:about="#G_BSU03310">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006468"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027467"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42434"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -119283,7 +131876,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37260" sboTerm="SBO:0000243" fbc:id="G_BSU37260" fbc:name="G_BSU37260" fbc:label="G_BSU37260">
+      <fbc:geneProduct metaid="G_BSU37270" sboTerm="SBO:0000243" fbc:id="G_BSU37270" fbc:name="G_BSU37270" fbc:label="G_BSU37270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119291,13 +131884,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU37260">
+            <rdf:Description rdf:about="#G_BSU37270">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003765"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020945"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11083"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42176"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -119448,6 +132042,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU24050" sboTerm="SBO:0000243" fbc:id="G_BSU24050" fbc:name="G_BSU24050" fbc:label="G_BSU24050">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU24050">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P37940"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU24040" sboTerm="SBO:0000243" fbc:id="G_BSU24040" fbc:name="G_BSU24040" fbc:label="G_BSU24040">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119497,27 +132112,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24050" sboTerm="SBO:0000243" fbc:id="G_BSU24050" fbc:name="G_BSU24050" fbc:label="G_BSU24050">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24050">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10307"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P37940"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15550" sboTerm="SBO:0000243" fbc:id="G_BSU15550" fbc:name="G_BSU15550" fbc:label="G_BSU15550">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119591,6 +132185,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU18670" sboTerm="SBO:0000243" fbc:id="G_BSU18670" fbc:name="G_BSU18670" fbc:label="G_BSU18670">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU18670">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34767"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU33240" sboTerm="SBO:0000243" fbc:id="G_BSU33240" fbc:name="G_BSU33240" fbc:label="G_BSU33240">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119624,7 +132241,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18670" sboTerm="SBO:0000243" fbc:id="G_BSU18670" fbc:name="G_BSU18670" fbc:label="G_BSU18670">
+      <fbc:geneProduct metaid="G_BSU34100" sboTerm="SBO:0000243" fbc:id="G_BSU34100" fbc:name="G_BSU34100" fbc:label="G_BSU34100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119632,15 +132249,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18670">
+            <rdf:Description rdf:about="#G_BSU34100">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017774"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13484"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042540"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -119673,7 +132286,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18480" sboTerm="SBO:0000243" fbc:id="G_BSU18480" fbc:name="G_BSU18480" fbc:label="G_BSU18480">
+      <fbc:geneProduct metaid="G_BSU23800" sboTerm="SBO:0000243" fbc:id="G_BSU23800" fbc:name="G_BSU23800" fbc:label="G_BSU23800">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119681,7 +132294,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18480">
+            <rdf:Description rdf:about="#G_BSU23800">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000304"/>
@@ -119689,8 +132302,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028939"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029036"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11049"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P0CI77"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54552"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -119721,7 +132334,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23800" sboTerm="SBO:0000243" fbc:id="G_BSU23800" fbc:name="G_BSU23800" fbc:label="G_BSU23800">
+      <fbc:geneProduct metaid="G_BSU18480" sboTerm="SBO:0000243" fbc:id="G_BSU18480" fbc:name="G_BSU18480" fbc:label="G_BSU18480">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119729,7 +132342,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23800">
+            <rdf:Description rdf:about="#G_BSU18480">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000304"/>
@@ -119737,8 +132350,8 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028939"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029036"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54552"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P0CI77"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -119866,7 +132479,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24090" sboTerm="SBO:0000243" fbc:id="G_BSU24090" fbc:name="G_BSU24090" fbc:label="G_BSU24090">
+      <fbc:geneProduct metaid="G_BSU37660" sboTerm="SBO:0000243" fbc:id="G_BSU37660" fbc:name="G_BSU37660" fbc:label="G_BSU37660">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119874,21 +132487,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24090">
+            <rdf:Description rdf:about="#G_BSU37660">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004614"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014079"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1TD9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1XCO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39646"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU37660" sboTerm="SBO:0000243" fbc:id="G_BSU37660" fbc:name="G_BSU37660" fbc:label="G_BSU37660">
+      <fbc:geneProduct metaid="G_BSU24090" sboTerm="SBO:0000243" fbc:id="G_BSU24090" fbc:name="G_BSU24090" fbc:label="G_BSU24090">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -119896,16 +132511,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU37660">
+            <rdf:Description rdf:about="#G_BSU24090">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002505"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004614"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1TD9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1XCO"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54530"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -120017,6 +132630,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU14590" sboTerm="SBO:0000243" fbc:id="G_BSU14590" fbc:name="G_BSU14590" fbc:label="G_BSU14590">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU14590">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P21882"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU14600" sboTerm="SBO:0000243" fbc:id="G_BSU14600" fbc:name="G_BSU14600" fbc:label="G_BSU14600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120064,47 +132700,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU14590" sboTerm="SBO:0000243" fbc:id="G_BSU14590" fbc:name="G_BSU14590" fbc:label="G_BSU14590">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU14590">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005476"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P21882"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU08310" sboTerm="SBO:0000243" fbc:id="G_BSU08310" fbc:name="G_BSU08310" fbc:label="G_BSU08310">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU08310">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888168"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU11140" sboTerm="SBO:0000243" fbc:id="G_BSU11140" fbc:name="G_BSU11140" fbc:label="G_BSU11140">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120302,7 +132897,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU10340" sboTerm="SBO:0000243" fbc:id="G_BSU10340" fbc:name="G_BSU10340" fbc:label="G_BSU10340">
+      <fbc:geneProduct metaid="G_BSU33910" sboTerm="SBO:0000243" fbc:id="G_BSU33910" fbc:name="G_BSU33910" fbc:label="G_BSU33910">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120310,21 +132905,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU10340">
+            <rdf:Description rdf:about="#G_BSU33910">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001345"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029033"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187C3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187C3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39773"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33910" sboTerm="SBO:0000243" fbc:id="G_BSU33910" fbc:name="G_BSU33910" fbc:label="G_BSU33910">
+      <fbc:geneProduct metaid="G_BSU10340" sboTerm="SBO:0000243" fbc:id="G_BSU10340" fbc:name="G_BSU10340" fbc:label="G_BSU10340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120332,16 +132929,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33910">
+            <rdf:Description rdf:about="#G_BSU10340">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006124"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011258"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187C3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187C3"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -120392,29 +132987,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03110" sboTerm="SBO:0000243" fbc:id="G_BSU03110" fbc:name="G_BSU03110" fbc:label="G_BSU03110">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03110">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001398"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAE2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945050"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13609"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU34010" sboTerm="SBO:0000243" fbc:id="G_BSU34010" fbc:name="G_BSU34010" fbc:label="G_BSU34010">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120422,45 +132994,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU27180" sboTerm="SBO:0000243" fbc:id="G_BSU27180" fbc:name="G_BSU27180" fbc:label="G_BSU27180">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU27180">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887311"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24970" sboTerm="SBO:0000243" fbc:id="G_BSU24970" fbc:name="G_BSU24970" fbc:label="G_BSU24970">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24970">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005672"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46340"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU24960" sboTerm="SBO:0000243" fbc:id="G_BSU24960" fbc:name="G_BSU24960" fbc:label="G_BSU24960">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120486,7 +133019,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24950" sboTerm="SBO:0000243" fbc:id="G_BSU24950" fbc:name="G_BSU24950" fbc:label="G_BSU24950">
+      <fbc:geneProduct metaid="G_BSU24990" sboTerm="SBO:0000243" fbc:id="G_BSU24990" fbc:name="G_BSU24990" fbc:label="G_BSU24990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120494,17 +133027,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24950">
+            <rdf:Description rdf:about="#G_BSU24990">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11379"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46338"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -120532,7 +133061,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU24990" sboTerm="SBO:0000243" fbc:id="G_BSU24990" fbc:name="G_BSU24990" fbc:label="G_BSU24990">
+      <fbc:geneProduct metaid="G_BSU24970" sboTerm="SBO:0000243" fbc:id="G_BSU24970" fbc:name="G_BSU24970" fbc:label="G_BSU24970">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120540,13 +133069,38 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU24990">
+            <rdf:Description rdf:about="#G_BSU24970">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011862"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11375"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46340"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU24950" sboTerm="SBO:0000243" fbc:id="G_BSU24950" fbc:name="G_BSU24950" fbc:label="G_BSU24950">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU24950">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46342"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -120640,6 +133194,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU23490" sboTerm="SBO:0000243" fbc:id="G_BSU23490" fbc:name="G_BSU23490" fbc:label="G_BSU23490">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU23490">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46354"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU19630" sboTerm="SBO:0000243" fbc:id="G_BSU19630" fbc:name="G_BSU19630" fbc:label="G_BSU19630">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120677,7 +133255,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23490" sboTerm="SBO:0000243" fbc:id="G_BSU23490" fbc:name="G_BSU23490" fbc:label="G_BSU23490">
+      <fbc:geneProduct metaid="G_BSU23760" sboTerm="SBO:0000243" fbc:id="G_BSU23760" fbc:name="G_BSU23760" fbc:label="G_BSU23760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120685,16 +133263,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23490">
+            <rdf:Description rdf:about="#G_BSU23760">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000845"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011268"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11330"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004566"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006083"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54556"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -120720,28 +133296,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23760" sboTerm="SBO:0000243" fbc:id="G_BSU23760" fbc:name="G_BSU23760" fbc:label="G_BSU23760">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23760">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004566"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006083"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54556"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38240" sboTerm="SBO:0000243" fbc:id="G_BSU38240" fbc:name="G_BSU38240" fbc:label="G_BSU38240">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120864,7 +133418,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU18210" sboTerm="SBO:0000243" fbc:id="G_BSU18210" fbc:name="G_BSU18210" fbc:label="G_BSU18210">
+      <fbc:geneProduct metaid="G_BSU23920" sboTerm="SBO:0000243" fbc:id="G_BSU23920" fbc:name="G_BSU23920" fbc:label="G_BSU23920">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120872,22 +133426,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU18210">
+            <rdf:Description rdf:about="#G_BSU23920">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000438"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011762"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011763"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54541"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23920" sboTerm="SBO:0000243" fbc:id="G_BSU23920" fbc:name="G_BSU23920" fbc:label="G_BSU23920">
+      <fbc:geneProduct metaid="G_BSU18210" sboTerm="SBO:0000243" fbc:id="G_BSU18210" fbc:name="G_BSU18210" fbc:label="G_BSU18210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -120895,16 +133450,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23920">
+            <rdf:Description rdf:about="#G_BSU18210">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000438"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011762"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011763"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11733"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31825"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -121129,13 +133683,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU17560" sboTerm="SBO:0000243" fbc:id="G_BSU17560" fbc:name="G_BSU17560" fbc:label="G_BSU17560">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU22650" sboTerm="SBO:0000243" fbc:id="G_BSU22650" fbc:name="G_BSU22650" fbc:label="G_BSU22650">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121158,6 +133705,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU17560" sboTerm="SBO:0000243" fbc:id="G_BSU17560" fbc:name="G_BSU17560" fbc:label="G_BSU17560">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU34860" sboTerm="SBO:0000243" fbc:id="G_BSU34860" fbc:name="G_BSU34860" fbc:label="G_BSU34860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121205,25 +133759,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU17220" sboTerm="SBO:0000243" fbc:id="G_BSU17220" fbc:name="G_BSU17220" fbc:label="G_BSU17220">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU17220">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888023"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU06480" sboTerm="SBO:0000243" fbc:id="G_BSU06480" fbc:name="G_BSU06480" fbc:label="G_BSU06480">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121358,7 +133893,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU05610" sboTerm="SBO:0000243" fbc:id="G_BSU05610" fbc:name="G_BSU05610" fbc:label="G_BSU05610">
+      <fbc:geneProduct metaid="G_BSU19580" sboTerm="SBO:0000243" fbc:id="G_BSU19580" fbc:name="G_BSU19580" fbc:label="G_BSU19580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121366,21 +133901,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU05610">
+            <rdf:Description rdf:about="#G_BSU19580">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899360"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKD5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34745"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03220" sboTerm="SBO:0000243" fbc:id="G_BSU03220" fbc:name="G_BSU03220" fbc:label="G_BSU03220">
+      <fbc:geneProduct metaid="G_BSU06660" sboTerm="SBO:0000243" fbc:id="G_BSU06660" fbc:name="G_BSU06660" fbc:label="G_BSU06660">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121388,22 +133921,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03220">
+            <rdf:Description rdf:about="#G_BSU06660">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001734"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011851"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018212"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019900"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O06493"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU19580" sboTerm="SBO:0000243" fbc:id="G_BSU19580" fbc:name="G_BSU19580" fbc:label="G_BSU19580">
+      <fbc:geneProduct metaid="G_BSU03220" sboTerm="SBO:0000243" fbc:id="G_BSU03220" fbc:name="G_BSU03220" fbc:label="G_BSU03220">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121411,12 +133944,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU19580">
+            <rdf:Description rdf:about="#G_BSU03220">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001734"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94392"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -121445,29 +133981,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU06660" sboTerm="SBO:0000243" fbc:id="G_BSU06660" fbc:name="G_BSU06660" fbc:label="G_BSU06660">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU06660">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001734"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018212"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019900"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O06493"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU00510" sboTerm="SBO:0000243" fbc:id="G_BSU00510" fbc:name="G_BSU00510" fbc:label="G_BSU00510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121684,7 +134197,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23270" sboTerm="SBO:0000243" fbc:id="G_BSU23270" fbc:name="G_BSU23270" fbc:label="G_BSU23270">
+      <fbc:geneProduct metaid="G_BSU23250" sboTerm="SBO:0000243" fbc:id="G_BSU23250" fbc:name="G_BSU23250" fbc:label="G_BSU23250">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121692,22 +134205,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23270">
+            <rdf:Description rdf:about="#G_BSU23250">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017938"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023366"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10519"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P16440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1RVV"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1ZIS"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P11998"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU23250" sboTerm="SBO:0000243" fbc:id="G_BSU23250" fbc:name="G_BSU23250" fbc:label="G_BSU23250">
+      <fbc:geneProduct metaid="G_BSU23270" sboTerm="SBO:0000243" fbc:id="G_BSU23270" fbc:name="G_BSU23270" fbc:label="G_BSU23270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121715,14 +134227,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU23250">
+            <rdf:Description rdf:about="#G_BSU23270">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10521"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1RVV"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1ZIS"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P11998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P16440"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -121838,7 +134351,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33970" sboTerm="SBO:0000243" fbc:id="G_BSU33970" fbc:name="G_BSU33970" fbc:label="G_BSU33970">
+      <fbc:geneProduct metaid="G_BSU12370" sboTerm="SBO:0000243" fbc:id="G_BSU12370" fbc:name="G_BSU12370" fbc:label="G_BSU12370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121846,19 +134359,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33970">
+            <rdf:Description rdf:about="#G_BSU12370">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CL07"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02925"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10815"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU12370" sboTerm="SBO:0000243" fbc:id="G_BSU12370" fbc:name="G_BSU12370" fbc:label="G_BSU12370">
+      <fbc:geneProduct metaid="G_BSU33970" sboTerm="SBO:0000243" fbc:id="G_BSU33970" fbc:name="G_BSU33970" fbc:label="G_BSU33970">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -121866,13 +134380,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU12370">
+            <rdf:Description rdf:about="#G_BSU33970">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02925"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CL07"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176745"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -121941,13 +134454,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU20070" sboTerm="SBO:0000243" fbc:id="G_BSU20070" fbc:name="G_BSU20070" fbc:label="G_BSU20070">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU17370" sboTerm="SBO:0000243" fbc:id="G_BSU17370" fbc:name="G_BSU17370" fbc:label="G_BSU17370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121970,6 +134476,38 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU20070" sboTerm="SBO:0000243" fbc:id="G_BSU20070" fbc:name="G_BSU20070" fbc:label="G_BSU20070">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU17380" sboTerm="SBO:0000243" fbc:id="G_BSU17380" fbc:name="G_BSU17380" fbc:label="G_BSU17380">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU17380">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P50620"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU17390" sboTerm="SBO:0000243" fbc:id="G_BSU17390" fbc:name="G_BSU17390" fbc:label="G_BSU17390">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121995,31 +134533,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU17380" sboTerm="SBO:0000243" fbc:id="G_BSU17380" fbc:name="G_BSU17380" fbc:label="G_BSU17380">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU17380">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000788"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013509"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11404"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P50620"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15790" sboTerm="SBO:0000243" fbc:id="G_BSU15790" fbc:name="G_BSU15790" fbc:label="G_BSU15790">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -122226,7 +134739,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15850" sboTerm="SBO:0000243" fbc:id="G_BSU15850" fbc:name="G_BSU15850" fbc:label="G_BSU15850">
+      <fbc:geneProduct metaid="G_BSU15860" sboTerm="SBO:0000243" fbc:id="G_BSU15860" fbc:name="G_BSU15860" fbc:label="G_BSU15860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122234,22 +134747,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15850">
+            <rdf:Description rdf:about="#G_BSU15860">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004643"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029009"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13397"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34607"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15860" sboTerm="SBO:0000243" fbc:id="G_BSU15860" fbc:name="G_BSU15860" fbc:label="G_BSU15860">
+      <fbc:geneProduct metaid="G_BSU15850" sboTerm="SBO:0000243" fbc:id="G_BSU15850" fbc:name="G_BSU15850" fbc:label="G_BSU15850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122257,13 +134768,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15860">
+            <rdf:Description rdf:about="#G_BSU15850">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004642"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005130"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13398"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34635"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -122380,7 +134893,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01580" sboTerm="SBO:0000243" fbc:id="G_BSU01580" fbc:name="G_BSU01580" fbc:label="G_BSU01580">
+      <fbc:geneProduct metaid="G_BSU15580" sboTerm="SBO:0000243" fbc:id="G_BSU15580" fbc:name="G_BSU15580" fbc:label="G_BSU15580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122388,15 +134901,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01580">
+            <rdf:Description rdf:about="#G_BSU15580">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002645"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11562"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P55189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34734"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -122425,7 +134935,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15580" sboTerm="SBO:0000243" fbc:id="G_BSU15580" fbc:name="G_BSU15580" fbc:label="G_BSU15580">
+      <fbc:geneProduct metaid="G_BSU01580" sboTerm="SBO:0000243" fbc:id="G_BSU01580" fbc:name="G_BSU01580" fbc:label="G_BSU01580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122433,12 +134943,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15580">
+            <rdf:Description rdf:about="#G_BSU01580">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P55189"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -122513,13 +135026,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU19400" sboTerm="SBO:0000243" fbc:id="G_BSU19400" fbc:name="G_BSU19400" fbc:label="G_BSU19400">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU19330" sboTerm="SBO:0000243" fbc:id="G_BSU19330" fbc:name="G_BSU19330" fbc:label="G_BSU19330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -122565,6 +135071,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU19400" sboTerm="SBO:0000243" fbc:id="G_BSU19400" fbc:name="G_BSU19400" fbc:label="G_BSU19400">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU03910" sboTerm="SBO:0000243" fbc:id="G_BSU03910" fbc:name="G_BSU03910" fbc:label="G_BSU03910">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -122645,7 +135158,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28450" sboTerm="SBO:0000243" fbc:id="G_BSU28450" fbc:name="G_BSU28450" fbc:label="G_BSU28450">
+      <fbc:geneProduct metaid="G_BSU28430" sboTerm="SBO:0000243" fbc:id="G_BSU28430" fbc:name="G_BSU28430" fbc:label="G_BSU28430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122653,21 +135166,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28450">
+            <rdf:Description rdf:about="#G_BSU28430">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011138"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10351"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P08064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P08066"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28430" sboTerm="SBO:0000243" fbc:id="G_BSU28430" fbc:name="G_BSU28430" fbc:label="G_BSU28430">
+      <fbc:geneProduct metaid="G_BSU28450" sboTerm="SBO:0000243" fbc:id="G_BSU28450" fbc:name="G_BSU28450" fbc:label="G_BSU28450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122675,18 +135192,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU28430">
+            <rdf:Description rdf:about="#G_BSU28450">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017900"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025192"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10353"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P08066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P08064"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -122770,6 +135283,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU01680" sboTerm="SBO:0000243" fbc:id="G_BSU01680" fbc:name="G_BSU01680" fbc:label="G_BSU01680">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU01680">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q797S1"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU38050" sboTerm="SBO:0000243" fbc:id="G_BSU38050" fbc:name="G_BSU38050" fbc:label="G_BSU38050">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -122795,7 +135331,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01680" sboTerm="SBO:0000243" fbc:id="G_BSU01680" fbc:name="G_BSU01680" fbc:label="G_BSU01680">
+      <fbc:geneProduct metaid="G_BSU33430" sboTerm="SBO:0000243" fbc:id="G_BSU33430" fbc:name="G_BSU33430" fbc:label="G_BSU33430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122803,15 +135339,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU01680">
+            <rdf:Description rdf:about="#G_BSU33430">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11567"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q797S1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32213"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -122847,29 +135383,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33430" sboTerm="SBO:0000243" fbc:id="G_BSU33430" fbc:name="G_BSU33430" fbc:label="G_BSU33430">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33430">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005117"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006067"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32213"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU12380" sboTerm="SBO:0000243" fbc:id="G_BSU12380" fbc:name="G_BSU12380" fbc:label="G_BSU12380">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -122928,7 +135441,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35700" sboTerm="SBO:0000243" fbc:id="G_BSU35700" fbc:name="G_BSU35700" fbc:label="G_BSU35700">
+      <fbc:geneProduct metaid="G_BSU35710" sboTerm="SBO:0000243" fbc:id="G_BSU35710" fbc:name="G_BSU35710" fbc:label="G_BSU35710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122936,23 +135449,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35700">
+            <rdf:Description rdf:about="#G_BSU35710">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11191"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42953"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35720" sboTerm="SBO:0000243" fbc:id="G_BSU35720" fbc:name="G_BSU35720" fbc:label="G_BSU35720">
+      <fbc:geneProduct metaid="G_BSU35750" sboTerm="SBO:0000243" fbc:id="G_BSU35750" fbc:name="G_BSU35750" fbc:label="G_BSU35750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122960,19 +135470,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35720">
+            <rdf:Description rdf:about="#G_BSU35750">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10725"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P13485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P27620"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35530" sboTerm="SBO:0000243" fbc:id="G_BSU35530" fbc:name="G_BSU35530" fbc:label="G_BSU35530">
+      <fbc:geneProduct metaid="G_BSU35720" sboTerm="SBO:0000243" fbc:id="G_BSU35720" fbc:name="G_BSU35720" fbc:label="G_BSU35720">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -122980,20 +135490,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35530">
+            <rdf:Description rdf:about="#G_BSU35720">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018480"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12684"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10725"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P13485"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35710" sboTerm="SBO:0000243" fbc:id="G_BSU35710" fbc:name="G_BSU35710" fbc:label="G_BSU35710">
+      <fbc:geneProduct metaid="G_BSU35760" sboTerm="SBO:0000243" fbc:id="G_BSU35760" fbc:name="G_BSU35760" fbc:label="G_BSU35760">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123001,20 +135510,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35710">
+            <rdf:Description rdf:about="#G_BSU35760">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000412"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11205"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P27621"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35760" sboTerm="SBO:0000243" fbc:id="G_BSU35760" fbc:name="G_BSU35760" fbc:label="G_BSU35760">
+      <fbc:geneProduct metaid="G_BSU35530" sboTerm="SBO:0000243" fbc:id="G_BSU35530" fbc:name="G_BSU35530" fbc:label="G_BSU35530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123022,19 +135530,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35760">
+            <rdf:Description rdf:about="#G_BSU35530">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P27621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34753"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU35750" sboTerm="SBO:0000243" fbc:id="G_BSU35750" fbc:name="G_BSU35750" fbc:label="G_BSU35750">
+      <fbc:geneProduct metaid="G_BSU35700" sboTerm="SBO:0000243" fbc:id="G_BSU35700" fbc:name="G_BSU35700" fbc:label="G_BSU35700">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123042,12 +135551,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU35750">
+            <rdf:Description rdf:about="#G_BSU35700">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P27620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42954"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -123082,6 +135595,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU28500" sboTerm="SBO:0000243" fbc:id="G_BSU28500" fbc:name="G_BSU28500" fbc:label="G_BSU28500">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU29490" sboTerm="SBO:0000243" fbc:id="G_BSU29490" fbc:name="G_BSU29490" fbc:label="G_BSU29490">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123123,13 +135643,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU28500" sboTerm="SBO:0000243" fbc:id="G_BSU28500" fbc:name="G_BSU28500" fbc:label="G_BSU28500">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU16990" sboTerm="SBO:0000243" fbc:id="G_BSU16990" fbc:name="G_BSU16990" fbc:label="G_BSU16990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123269,7 +135782,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU17680" sboTerm="SBO:0000243" fbc:id="G_BSU17680" fbc:name="G_BSU17680" fbc:label="G_BSU17680">
+      <fbc:geneProduct metaid="G_BSU21820" sboTerm="SBO:0000243" fbc:id="G_BSU21820" fbc:name="G_BSU21820" fbc:label="G_BSU21820">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123277,26 +135790,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU17680">
+            <rdf:Description rdf:about="#G_BSU21820">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000398"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020940"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1B02"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BKO"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BKP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BSF"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BSP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P0CI79"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P11044"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU21820" sboTerm="SBO:0000243" fbc:id="G_BSU21820" fbc:name="G_BSU21820" fbc:label="G_BSU21820">
+      <fbc:geneProduct metaid="G_BSU17680" sboTerm="SBO:0000243" fbc:id="G_BSU17680" fbc:name="G_BSU17680" fbc:label="G_BSU17680">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123304,14 +135812,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU21820">
+            <rdf:Description rdf:about="#G_BSU17680">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000398"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020940"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P11044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1B02"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BKO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BKP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BSF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1BSP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P0CI79"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -123407,7 +135920,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU33920" sboTerm="SBO:0000243" fbc:id="G_BSU33920" fbc:name="G_BSU33920" fbc:label="G_BSU33920">
+      <fbc:geneProduct metaid="G_BSU23820" sboTerm="SBO:0000243" fbc:id="G_BSU23820" fbc:name="G_BSU23820" fbc:label="G_BSU23820">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123415,29 +135928,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU33920">
+            <rdf:Description rdf:about="#G_BSU23820">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000652"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020861"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR022896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10897"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P27876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045742"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU22950" sboTerm="SBO:0000243" fbc:id="G_BSU22950" fbc:name="G_BSU22950" fbc:label="G_BSU22950">
+      <fbc:geneProduct metaid="G_BSU05680" sboTerm="SBO:0000243" fbc:id="G_BSU05680" fbc:name="G_BSU05680" fbc:label="G_BSU05680">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU05680">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU34790" sboTerm="SBO:0000243" fbc:id="G_BSU34790" fbc:name="G_BSU34790" fbc:label="G_BSU34790">
+      <fbc:geneProduct metaid="G_BSU33920" sboTerm="SBO:0000243" fbc:id="G_BSU33920" fbc:name="G_BSU33920" fbc:label="G_BSU33920">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123445,17 +135966,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU34790">
+            <rdf:Description rdf:about="#G_BSU33920">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005982"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12398"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P80880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR022896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P27876"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -123488,7 +136007,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03270" sboTerm="SBO:0000243" fbc:id="G_BSU03270" fbc:name="G_BSU03270" fbc:label="G_BSU03270">
+      <fbc:geneProduct metaid="G_BSU34790" sboTerm="SBO:0000243" fbc:id="G_BSU34790" fbc:name="G_BSU34790" fbc:label="G_BSU34790">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123496,23 +136015,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03270">
+            <rdf:Description rdf:about="#G_BSU34790">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008255"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR022890"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P80880"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02840" sboTerm="SBO:0000243" fbc:id="G_BSU02840" fbc:name="G_BSU02840" fbc:label="G_BSU02840">
+      <fbc:geneProduct metaid="G_BSU03270" sboTerm="SBO:0000243" fbc:id="G_BSU03270" fbc:name="G_BSU03270" fbc:label="G_BSU03270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -123520,19 +136040,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02840">
+            <rdf:Description rdf:about="#G_BSU03270">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013870"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948762"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR022890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31475"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU22950" sboTerm="SBO:0000243" fbc:id="G_BSU22950" fbc:name="G_BSU22950" fbc:label="G_BSU22950">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU07810" sboTerm="SBO:0000243" fbc:id="G_BSU07810" fbc:name="G_BSU07810" fbc:label="G_BSU07810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123559,6 +136089,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU02840" sboTerm="SBO:0000243" fbc:id="G_BSU02840" fbc:name="G_BSU02840" fbc:label="G_BSU02840">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU02840">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11402"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU07800" sboTerm="SBO:0000243" fbc:id="G_BSU07800" fbc:name="G_BSU07800" fbc:label="G_BSU07800">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123670,6 +136221,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU36450" sboTerm="SBO:0000243" fbc:id="G_BSU36450" fbc:name="G_BSU36450" fbc:label="G_BSU36450">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15180" sboTerm="SBO:0000243" fbc:id="G_BSU15180" fbc:name="G_BSU15180" fbc:label="G_BSU15180">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123760,6 +136318,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU13350" sboTerm="SBO:0000243" fbc:id="G_BSU13350" fbc:name="G_BSU13350" fbc:label="G_BSU13350">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15220" sboTerm="SBO:0000243" fbc:id="G_BSU15220" fbc:name="G_BSU15220" fbc:label="G_BSU15220">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123782,13 +136347,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU13350" sboTerm="SBO:0000243" fbc:id="G_BSU13350" fbc:name="G_BSU13350" fbc:label="G_BSU13350">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU15200" sboTerm="SBO:0000243" fbc:id="G_BSU15200" fbc:name="G_BSU15200" fbc:label="G_BSU15200">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124028,7 +136586,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15610" sboTerm="SBO:0000243" fbc:id="G_BSU15610" fbc:name="G_BSU15610" fbc:label="G_BSU15610">
+      <fbc:geneProduct metaid="G_BSU03280" sboTerm="SBO:0000243" fbc:id="G_BSU03280" fbc:name="G_BSU03280" fbc:label="G_BSU03280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -124036,23 +136594,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU15610">
+            <rdf:Description rdf:about="#G_BSU03280">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000878"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003043"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003754"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006366"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014776"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014777"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13380"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42437"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU03280" sboTerm="SBO:0000243" fbc:id="G_BSU03280" fbc:name="G_BSU03280" fbc:label="G_BSU03280">
+      <fbc:geneProduct metaid="G_BSU15610" sboTerm="SBO:0000243" fbc:id="G_BSU15610" fbc:name="G_BSU15610" fbc:label="G_BSU15610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -124060,17 +136619,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU03280">
+            <rdf:Description rdf:about="#G_BSU15610">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000878"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003043"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003754"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006366"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014776"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014777"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34744"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -124288,6 +136846,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU36660" sboTerm="SBO:0000243" fbc:id="G_BSU36660" fbc:name="G_BSU36660" fbc:label="G_BSU36660">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_BSU36660">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P75030"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU36640" sboTerm="SBO:0000243" fbc:id="G_BSU36640" fbc:name="G_BSU36640" fbc:label="G_BSU36640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124334,7 +136913,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU36660" sboTerm="SBO:0000243" fbc:id="G_BSU36660" fbc:name="G_BSU36660" fbc:label="G_BSU36660">
+      <fbc:geneProduct metaid="G_BSU32450" sboTerm="SBO:0000243" fbc:id="G_BSU32450" fbc:name="G_BSU32450" fbc:label="G_BSU32450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -124342,13 +136921,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU36660">
+            <rdf:Description rdf:about="#G_BSU32450">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11981"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P75030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019842"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32141"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -124382,29 +136963,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU32450" sboTerm="SBO:0000243" fbc:id="G_BSU32450" fbc:name="G_BSU32450" fbc:label="G_BSU32450">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU32450">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR019842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32141"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU21450" sboTerm="SBO:0000243" fbc:id="G_BSU21450" fbc:name="G_BSU21450" fbc:label="G_BSU21450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124550,6 +137108,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_BSU10580" sboTerm="SBO:0000243" fbc:id="G_BSU10580" fbc:name="G_BSU10580" fbc:label="G_BSU10580">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_BSU23160" sboTerm="SBO:0000243" fbc:id="G_BSU23160" fbc:name="G_BSU23160" fbc:label="G_BSU23160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124564,14 +137129,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU01480" sboTerm="SBO:0000243" fbc:id="G_BSU01480" fbc:name="G_BSU01480" fbc:label="G_BSU01480">
+      <fbc:geneProduct metaid="G_BSU15460" sboTerm="SBO:0000243" fbc:id="G_BSU15460" fbc:name="G_BSU15460" fbc:label="G_BSU15460">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU15460" sboTerm="SBO:0000243" fbc:id="G_BSU15460" fbc:name="G_BSU15460" fbc:label="G_BSU15460">
+      <fbc:geneProduct metaid="G_BSU01480" sboTerm="SBO:0000243" fbc:id="G_BSU01480" fbc:name="G_BSU01480" fbc:label="G_BSU01480">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -124608,7 +137173,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02850" sboTerm="SBO:0000243" fbc:id="G_BSU02850" fbc:name="G_BSU02850" fbc:label="G_BSU02850">
+      <fbc:geneProduct metaid="G_BSU02870" sboTerm="SBO:0000243" fbc:id="G_BSU02870" fbc:name="G_BSU02870" fbc:label="G_BSU02870">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -124616,22 +137181,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02850">
+            <rdf:Description rdf:about="#G_BSU02870">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006127"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2O1E"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34610"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_BSU02870" sboTerm="SBO:0000243" fbc:id="G_BSU02870" fbc:name="G_BSU02870" fbc:label="G_BSU02870">
+      <fbc:geneProduct metaid="G_BSU02850" sboTerm="SBO:0000243" fbc:id="G_BSU02850" fbc:name="G_BSU02850" fbc:label="G_BSU02850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -124639,13 +137202,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_BSU02870">
+            <rdf:Description rdf:about="#G_BSU02850">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001626"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12765"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2O1E"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34966"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
diff --git a/carveme/data/benchmark/models/ecol.xml b/carveme/data/benchmark/models/ecol.xml
index d08e011..fb570d7 100644
--- a/carveme/data/benchmark/models/ecol.xml
+++ b/carveme/data/benchmark/models/ecol.xml
@@ -3,7 +3,7 @@
   <model metaid="ecol" id="ecol" fbc:strict="true">
     <notes>
       <html xmlns="http://www.w3.org/1999/xhtml">
-        <p>Description: This model was built with CarveMe version 1.4.1</p>
+        <p>Description: This model was built with CarveMe version 1.5.0</p>
       </html>
     </notes>
     <listOfCompartments>
@@ -1660,6 +1660,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_24dhhed_c" sboTerm="SBO:0000247" id="M_24dhhed_c" name="2,4-Dihydroxyhept-2-enedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H8O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_24dhhed_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/APNIDHDQYISZAE-HYXAFXHYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:73089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01170062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM722757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03708"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_25aics_c" sboTerm="SBO:0000247" id="M_25aics_c" name="(S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C13H15N4O12P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3023,6 +3050,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2dhglcn_c" sboTerm="SBO:0000247" id="M_2dhglcn_c" name="2-Dehydro-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2dhglcn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06473"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM582"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VBUYCZFBVCCYFD-JJYYJPOSSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03889"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2dhguln_c" sboTerm="SBO:0000247" id="M_2dhguln_c" name="2-Dehydro-L-gulonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H9O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3223,6 +3284,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2hadnt_c" sboTerm="SBO:0000247" id="M_2hadnt_c" name="2 Hydroxylamino 4 6 dinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HNO</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2hadnt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_2hdec9eg3p_c" sboTerm="SBO:0000247" id="M_2hdec9eg3p_c" name="2-hexadec-9-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H36O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3311,6 +3389,54 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2hh24dd_c" sboTerm="SBO:0000247" id="M_2hh24dd_c" name="2-Hydroxyhepta-2-4-dienedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H6O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O5</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2hh24dd_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146251"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2hyoxplac_c" sboTerm="SBO:0000247" id="M_2hyoxplac_c" name="2-Hydroxyphenylacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2hyoxplac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05852"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CCVYRRGZDBSHFU-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-11495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2ins_c" sboTerm="SBO:0000247" id="M_2ins_c" name="2-Inosose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H10O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3405,6 +3531,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2m35mdntha_c" sboTerm="SBO:0000247" id="M_2m35mdntha_c" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2m35mdntha_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_2m35mdntha_e" sboTerm="SBO:0000247" id="M_2m35mdntha_e" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2m35mdntha_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_2mahmp_c" sboTerm="SBO:0000247" id="M_2mahmp_c" name="2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H8N3O7P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3891,6 +4051,72 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2pglyc_c" sboTerm="SBO:0000247" id="M_2pglyc_c" name="2-Phosphoglycolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2O6P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2pglyc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ASCFNMCAHFUBCO-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-67"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00727"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2pglyc_e" sboTerm="SBO:0000247" id="M_2pglyc_e" name="2-Phosphoglycolate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2O6P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2pglyc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ASCFNMCAHFUBCO-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-67"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00727"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2sephchc_c" sboTerm="SBO:0000247" id="M_2sephchc_c" name="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H13O9">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3941,6 +4167,43 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_34dhbz_c" sboTerm="SBO:0000247" id="M_34dhbz_c" name="3,4-Dihydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhbz_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-4-DIHYDROXYBENZOATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM204"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YQUVCSBJEUQKSH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00197"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_34dhpac_e" sboTerm="SBO:0000247" id="M_34dhpac_e" name="3,4-Dihydroxyphenylacetaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H8O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4001,6 +4264,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_34dhpha_c" sboTerm="SBO:0000247" id="M_34dhpha_c" name="3-4-Dihydroxyphenylacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhpha_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01161"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CFFZDZCDUFSOFZ-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00854"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_34hpp_c" sboTerm="SBO:0000247" id="M_34hpp_c" name="3-(4-Hydroxyphenyl)pyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4071,6 +4366,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_35dnta_c" sboTerm="SBO:0000247" id="M_35dnta_c" name="N N bis 3 5 dinitrotolyl  amine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_35dnta_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_35dnta_e" sboTerm="SBO:0000247" id="M_35dnta_e" name="N N bis 3 5 dinitrotolyl  amine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HN</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_35dnta_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_3aib__D_c" sboTerm="SBO:0000247" id="M_3aib__D_c" name="D-3-Amino-isobutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C4H9NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5471,6 +5800,57 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3oxoadp_c" sboTerm="SBO:0000247" id="M_3oxoadp_c" name="3-Oxoadipate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H6O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H6O5</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3oxoadp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01170096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-KETO-ADIPATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM716"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RTGHRDFWYQHVFW-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00630"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_3padsel_c" sboTerm="SBO:0000247" id="M_3padsel_c" name="3&apos;-Phosphoadenylylselenate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H11N5O13P2Se">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N5O13P2Se</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -4.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3padsel_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM92909"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3pg_c" sboTerm="SBO:0000247" id="M_3pg_c" name="3-Phospho-D-glycerate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C3H4O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6073,6 +6453,65 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4cml_c" sboTerm="SBO:0000247" id="M_4cml_c" name="4-Carboxymuconolactone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H4O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H4O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4cml_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57979"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DHCUIDTZCMREHG-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00938"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4crsol_c" sboTerm="SBO:0000247" id="M_4crsol_c" name="P-Cresol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4crsol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IWDCLRJOBJJRNH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01042"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4fe4s_c" sboTerm="SBO:0000247" id="M_4fe4s_c" name="[4Fe-4S] iron-sulfur cluster" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Fe4S4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6096,6 +6535,41 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4fumacac_c" sboTerm="SBO:0000247" id="M_4fumacac_c" name="4 Fumarylacetoacetate C8H6O6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H6O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H6O6</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4fumacac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-31175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1830"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30907"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GACSIVHAIFQKTC-OWOJBTEDSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01170066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-FUMARYL-ACETOACETATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00780"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4h2opntn_c" sboTerm="SBO:0000247" id="M_4h2opntn_c" name="4-Hydroxy-2-oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6124,6 +6598,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hadnt_c" sboTerm="SBO:0000247" id="M_4hadnt_c" name="4 Hydroxylamino 2 6 dinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HNO</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4hadnt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4hba_c" sboTerm="SBO:0000247" id="M_4hba_c" name="4-Hydroxy-benzyl alcohol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6151,6 +6642,93 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hba_e" sboTerm="SBO:0000247" id="M_4hba_e" name="4-Hydroxy-benzyl alcohol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hba_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVJSUAQZOZWCKN-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C17467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:67410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXY-BENZYL-ALCOHOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM107505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd17595"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbald_e" sboTerm="SBO:0000247" id="M_4hbald_e" name="4-Hydroxybenzaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbald_p" sboTerm="SBO:0000247" id="M_4hbald_p" name="4-Hydroxybenzaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4hbz_c" sboTerm="SBO:0000247" id="M_4hbz_c" name="4-Hydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6250,38 +6828,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_4hoxpacd_c" sboTerm="SBO:0000247" id="M_4hoxpacd_c" name="4-Hydroxyphenylacetaldehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H8O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C8H8O2</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_4hoxpacd_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-500608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5696178"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03765"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10899"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03767"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IPRPPFIAVHPVJH-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HYDRPHENYLAC-CPD"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM479"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02361"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_4hoxpacd_e" sboTerm="SBO:0000247" id="M_4hoxpacd_e" name="4-Hydroxyphenylacetaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6505,6 +7051,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4izp_c" sboTerm="SBO:0000247" id="M_4izp_c" name="4-Imidazolone-5-propanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H7N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H7N2O3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4izp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-34979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62719"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-IMIDAZOLONE-5-PROPIONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90394"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYNHYKDPSRPBNZ-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02311"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4mhetz_c" sboTerm="SBO:0000247" id="M_4mhetz_c" name="4-Methyl-5-(2-hydroxyethyl)-thiazole" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9NOS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6537,6 +7119,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4mlacac_c" sboTerm="SBO:0000247" id="M_4mlacac_c" name="4 Maleylacetoacetate C8H6O6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H6O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H6O6</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4mlacac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-31135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01036"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:133872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17105"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47904"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GACSIVHAIFQKTC-UPHRSURJSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01170114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-MALEYL-ACETOACETATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00763"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4mop_c" sboTerm="SBO:0000247" id="M_4mop_c" name="4-Methyl-2-oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7014,6 +7630,88 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5cmhm_c" sboTerm="SBO:0000247" id="M_5cmhm_c" name="5-Carboxymethyl-2-hydroxymuconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H5O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H5O7</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5cmhm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47961"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HJIBROWPWNLWHX-IKENXXAYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02572"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5cmhmsa_c" sboTerm="SBO:0000247" id="M_5cmhmsa_c" name="2-Hydroxy-5-carboxymethylmuconate-Semialdehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H6O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H6O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5cmhmsa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01030989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1628"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NLXIEJRQAIHYPN-IOBHVTPZSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02828"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5cohe_c" sboTerm="SBO:0000247" id="M_5cohe_c" name="5-Carboxy-2-oxohept-3-enedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H5O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H5O7</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5cohe_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM46951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_5dglcn_c" sboTerm="SBO:0000247" id="M_5dglcn_c" name="5-Dehydro-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7456,6 +8154,96 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5mtr_e" sboTerm="SBO:0000247" id="M_5mtr_e" name="5-Methylthio-D-ribose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5mtr_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ACWASDPGAVYCNI-JKUQZMGJSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:78440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01981"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5mtr_p" sboTerm="SBO:0000247" id="M_5mtr_p" name="5-Methylthio-D-ribose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5mtr_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ACWASDPGAVYCNI-JKUQZMGJSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:78440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01981"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5odhf2a_c" sboTerm="SBO:0000247" id="M_5odhf2a_c" name="5-Oxo-4,5-dihydrofuran-2-acetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H5O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5odhf2a_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-OXOADIPATE-ENOL-LACTONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM829"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZPEHSARSWGDCEX-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02255"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_5pg35pg_c" sboTerm="SBO:0000247" id="M_5pg35pg_c" name="5-Phosphoguanylyl(3-&gt;5)guanosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C20H23N10O15P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7608,6 +8396,64 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_6hnac_c" sboTerm="SBO:0000247" id="M_6hnac_c" name="6-Hydroxynicotinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_6p2dhglcn_c" sboTerm="SBO:0000247" id="M_6p2dhglcn_c" name="6-Phospho-2-dehydro-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H11O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O10P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6p2dhglcn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12228"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1218"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZKUSPPOKDDRMIU-JJYYJPOSSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00896"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_6pgc_c" sboTerm="SBO:0000247" id="M_6pgc_c" name="6-Phospho-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H10O10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7721,6 +8567,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_CCbuttc_c" sboTerm="SBO:0000247" id="M_CCbuttc_c" name="Cis,cis-Butadiene-1,2,4-tricarboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C7H3O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H3O6</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_CCbuttc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57496"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KJOVGYUGXHIVAY-BXTBVDPRSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00856"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_LalaDgluMdapDala_c" sboTerm="SBO:0000247" id="M_LalaDgluMdapDala_c" name="L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C18H30N5O9">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8074,6 +8951,26 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_R_3hdcoa_c" sboTerm="SBO:0000247" id="M_R_3hdcoa_c" name="(R)-Hydroxydecanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H50N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C31H50N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_R_3hdcoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16755"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_R_3hmrscoa_c" sboTerm="SBO:0000247" id="M_R_3hmrscoa_c" name="(R)-3-hydroxytetradecanoyl-coa" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C35H58N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8099,6 +8996,57 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_R_3httdca_c" sboTerm="SBO:0000247" id="M_R_3httdca_c" name=" 3 Hydroxytetradecanoic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H27O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H27O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3httdca_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_R_3httdca_e" sboTerm="SBO:0000247" id="M_R_3httdca_e" name=" 3 Hydroxytetradecanoic acid" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H27O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H27O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3httdca_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_R_3httdca_p" sboTerm="SBO:0000247" id="M_R_3httdca_p" name=" 3 Hydroxytetradecanoic acid" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H27O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H27O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3httdca_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_S2hglut_c" sboTerm="SBO:0000247" id="M_S2hglut_c" name="(S)-2-Hydroxyglutarate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H6O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8231,6 +9179,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_aact_c" sboTerm="SBO:0000247" id="M_aact_c" name="Aminoacetone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C3H8NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H8NO</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_aact_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BCDGQXUMWHRQCB-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2648"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMINO-ACETONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01298"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ac_c" sboTerm="SBO:0000247" id="M_ac_c" name="Acetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C2H3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9729,6 +10710,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_actn__S_c" sboTerm="SBO:0000247" id="M_actn__S_c" name="S-acetoin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C4H8O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H8O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_actn__S_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_actp_c" sboTerm="SBO:0000247" id="M_actp_c" name="Acetyl phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C2H3O5P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9759,6 +10757,66 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ad_c" sboTerm="SBO:0000247" id="M_ad_c" name="Acetamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C2H5NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H5NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ad_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49028"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DLFVBJFMPXGRIB-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETAMIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ad_e" sboTerm="SBO:0000247" id="M_ad_e" name="Acetamide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C2H5NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H5NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ad_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49028"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DLFVBJFMPXGRIB-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETAMIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_adcob1nda_c" sboTerm="SBO:0000247" id="M_adcob1nda_c" name="Adenosyl-cobyrinate-a-c-diamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C55CoH68N11O15">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9778,6 +10836,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_adcobhex_c" sboTerm="SBO:0000247" id="M_adcobhex_c" name="Adenosyl-cobyric acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C55H76CoN15O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C55H76CoN15O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_adcobhex_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AXZSUSWNAXMBBB-NQYRMHKHSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03917"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ade_c" sboTerm="SBO:0000247" id="M_ade_c" name="Adenine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H5N5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10000,6 +11084,59 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_adocbi_c" sboTerm="SBO:0000247" id="M_adocbi_c" name="Adenosyl cobinamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C58H84CoN16O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C58H84CoN16O11</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_adocbi_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06964"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KQXSPGAEBZWHMC-OCUXTBADSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADENOSYLCOBINAMIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03918"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_adocbip_c" sboTerm="SBO:0000247" id="M_adocbip_c" name="Adenosyl cobinamide phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C58H83CoN16O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C58H83CoN16O14P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_adocbip_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58502"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADENOSYLCOBINAMIDE-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM856"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MQCMBMUJJHSGIF-QMUWONGRSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03919"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_adp_c" sboTerm="SBO:0000247" id="M_adp_c" name="ADP C10H12N5O10P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10113,6 +11250,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_adsel_c" sboTerm="SBO:0000247" id="M_adsel_c" name="Adenylylselenate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H12N5O10PSe">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H12N5O10PSe</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_adsel_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM92092"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_agm_c" sboTerm="SBO:0000247" id="M_agm_c" name="Agmatine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C5H16N4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11785,6 +12942,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_apc_e" sboTerm="SBO:0000247" id="M_apc_e" name="Ampicillin" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C16H19N3O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H19N3O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_apc_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_apc_p" sboTerm="SBO:0000247" id="M_apc_p" name="Ampicillin" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C16H19N3O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H19N3O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_apc_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_apoACP_c" sboTerm="SBO:0000247" id="M_apoACP_c" name="Apoprotein [acyl carrier protein]" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C373H582N94O136S2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11807,6 +13000,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_appl_c" sboTerm="SBO:0000247" id="M_appl_c" name="1-Aminopropan-2-ol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C3H10NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H10NO</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_appl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12136"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXKKHQJGJAFBHI-GSVOUGTGSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1-AMINO-PROPAN-2-OL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19039"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_applp_c" sboTerm="SBO:0000247" id="M_applp_c" name="D-1-Aminopropan-2-ol O-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H9NO4P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H9NO4P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_applp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:R-1-AMINOPROPAN-2-YL-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1697"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YBOLZUJJGUZUDC-GSVOUGTGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02547"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_aps_c" sboTerm="SBO:0000247" id="M_aps_c" name="Adenosine 5&apos;-phosphosulfate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O10PS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12054,6 +13309,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_arbt6p_e" sboTerm="SBO:0000247" id="M_arbt6p_e" name="Arbutin 6-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H15O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H15O10P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_arbt6p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60929"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FBHYCDOVYMVLEN-RMPHRYRLSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03697"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_arbt_e" sboTerm="SBO:0000247" id="M_arbt_e" name="Arbutin C12H16O7" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H16O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12727,6 +14008,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_asp__D_c" sboTerm="SBO:0000247" id="M_asp__D_c" name="D-Aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H6NO4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_asp__D_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20920"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4108"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CKLJMWTZIZZHCS-UWTATZPHSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-302"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00320"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_asp__L_c" sboTerm="SBO:0000247" id="M_asp__L_c" name="L-Aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14344,35 +15657,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_ch4s_e" sboTerm="SBO:0000247" id="M_ch4s_e" name="Methanethiol CH4S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH4S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: CH4S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ch4s_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00409"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14586"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16007"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03227"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LSDPWZHWYPCBBB-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-7671"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM652"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00324"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_chol_c" sboTerm="SBO:0000247" id="M_chol_c" name="Choline C5H14NO" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C5H14NO">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -15275,6 +16559,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cm_c" sboTerm="SBO:0000247" id="M_cm_c" name="Chloramphenicol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H12Cl2N2O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:94390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHLORAMPHENICOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4519"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WIIZWVCIJKGZOK-RKDXNWHRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00680"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cm_e" sboTerm="SBO:0000247" id="M_cm_e" name="Chloramphenicol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18599,6 +19916,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhgly_c" sboTerm="SBO:0000247" id="M_dhgly_c" name="Dehydroglycine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C2H2NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhgly_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1984"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/TVMUHOAONWHJBV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14545"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhlam_c" sboTerm="SBO:0000247" id="M_dhlam_c" name="Dihydrolipoamide C8H17NOS2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H17NOS2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18632,6 +19976,25 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhmpt_c" sboTerm="SBO:0000247" id="M_dhmpt_c" name="Dihydromonapterin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C9H13N5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H13N5O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhmpt_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM148224"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhna_c" sboTerm="SBO:0000247" id="M_dhna_c" name="1,4-Dihydroxy-2-naphthoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18876,6 +20239,92 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_dhpyr_c" sboTerm="SBO:0000247" id="M_dhpyr_c" name="2,5-Dihydroxypyridine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H5NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H5NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhpyr_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:937"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CHGPEDOMXOLANF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-5-DIHYDROXYPYRIDINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00778"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_diact_c" sboTerm="SBO:0000247" id="M_diact_c" name="Diacetyl C4H6O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_diact_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA12000012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIACETYL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1467"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QSJXEFYPDANLFS-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00551"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_diact_e" sboTerm="SBO:0000247" id="M_diact_e" name="Diacetyl C4H6O2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_diact_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA12000012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIACETYL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1467"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QSJXEFYPDANLFS-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00551"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dimp_c" sboTerm="SBO:0000247" id="M_dimp_c" name="DIMP C10H12N4O7P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H11N4O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -19552,6 +21001,81 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_drib_c" sboTerm="SBO:0000247" id="M_drib_c" name="Deoxyribose C5H10O4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_drib_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:90761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90412"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PDWIQYODPROSQH-PYHARJCCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_drib_e" sboTerm="SBO:0000247" id="M_drib_e" name="Deoxyribose C5H10O4" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_drib_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:90761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90412"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PDWIQYODPROSQH-PYHARJCCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_drib_p" sboTerm="SBO:0000247" id="M_drib_p" name="Deoxyribose C5H10O4" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_drib_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:90761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90412"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PDWIQYODPROSQH-PYHARJCCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dscl_c" sboTerm="SBO:0000247" id="M_dscl_c" name="Dihydrosirohydrochlorin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H41N4O16">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21428,6 +22952,28 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fe3dcit_c" sboTerm="SBO:0000247" id="M_fe3dcit_c" name="Fe(III)dicitrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12FeH10O14">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12FeH10O14</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -12.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fe3dcit_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03725"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_fe3dcit_e" sboTerm="SBO:0000247" id="M_fe3dcit_e" name="Fe(III)dicitrate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12FeH10O14">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22306,6 +23852,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_forglu_c" sboTerm="SBO:0000247" id="M_forglu_c" name="N-Formimidoyl-L-glutamate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9N2O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9N2O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_forglu_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12502"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00854"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-FORMIMINO-L-GLUTAMATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM496"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NRXIKWMTVXPVEF-BYPYZUCNSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00344"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_forglu_e" sboTerm="SBO:0000247" id="M_forglu_e" name="N-Formimidoyl-L-glutamate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9N2O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9N2O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_forglu_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30158"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00344"/>
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@@ -22407,37 +24015,6 @@
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
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-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
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         <notes>
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@@ -28775,142 +30352,140 @@
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+      <species metaid="M_hco3_e" sboTerm="SBO:0000247" id="M_hco3_e" name="Bicarbonate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C4H9NO2S</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: CHO3</p>
+            <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCO3"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00242"/>
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+      <species metaid="M_hco3_p" sboTerm="SBO:0000247" id="M_hco3_p" name="Bicarbonate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C16H31O2</p>
+            <p>FORMULA: CHO3</p>
             <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00242"/>
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+      <species metaid="M_hcys__L_c" sboTerm="SBO:0000247" id="M_hcys__L_c" name="L-Homocysteine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C16H31O2</p>
-            <p>CHARGE: -1</p>
+            <p>FORMULA: C4H9NO2S</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
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+      <species metaid="M_hdca_c" sboTerm="SBO:0000247" id="M_hdca_c" name="Hexadecanoate (n-C16:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C16H31O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C16H31O2</p>
@@ -28920,7 +30495,101 @@
         </notes>
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-            <rdf:Description rdf:about="#M_hdca_p">
+            <rdf:Description rdf:about="#M_hdca_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2453691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-3632881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-426576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5690516"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15756"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:233028"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05341"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60083"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IPCSVZSSVZVIGE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PALMITATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00214"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hdca_e" sboTerm="SBO:0000247" id="M_hdca_e" name="Hexadecanoate (n-C16:0)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C16H31O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H31O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hdca_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2453691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-3632881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-426576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5690516"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:231736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:233028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05341"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60083"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IPCSVZSSVZVIGE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PALMITATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00214"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hdca_p" sboTerm="SBO:0000247" id="M_hdca_p" name="Hexadecanoate (n-C16:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C16H31O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H31O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hdca_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2453691"/>
@@ -29090,6 +30759,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hemeO_c" sboTerm="SBO:0000247" id="M_hemeO_c" name="Heme O C49H56FeN4O5" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C49FeH56N4O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C49FeH56N4O5</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hemeO_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2995328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61719"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FISPASSVCDRERW-ARQJTVBPSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-17063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HEME_O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11313"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hethmpp_c" sboTerm="SBO:0000247" id="M_hethmpp_c" name="Hydroxy ethyl Thiamin diphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H20N4O8P2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29202,6 +30902,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hgentis_c" sboTerm="SBO:0000247" id="M_hgentis_c" name="Homogentisate C8H7O4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hgentis_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00130"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGMNYECMUMZDDF-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HOMOGENTISATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00426"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_his__L_c" sboTerm="SBO:0000247" id="M_his__L_c" name="L-Histidine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32446,6 +34179,90 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_m_xyl_c" sboTerm="SBO:0000247" id="M_m_xyl_c" name="M-Xylene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_m_xyl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59810"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IVSZLXZYQVIEFR-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:META-XYLENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04446"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_m_xyl_e" sboTerm="SBO:0000247" id="M_m_xyl_e" name="M-Xylene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_m_xyl_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59810"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IVSZLXZYQVIEFR-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:META-XYLENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04446"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_m_xyl_p" sboTerm="SBO:0000247" id="M_m_xyl_p" name="M-Xylene" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_m_xyl_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59810"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IVSZLXZYQVIEFR-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:META-XYLENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04446"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mal__D_c" sboTerm="SBO:0000247" id="M_mal__D_c" name="D-Malate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H4O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32684,121 +34501,106 @@
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         </annotation>
       </species>
-      <species metaid="M_malt6p_c" sboTerm="SBO:0000247" id="M_malt6p_c" name="Maltose 6&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H21O14P">
+      <species metaid="M_male_c" sboTerm="SBO:0000247" id="M_male_c" name="Maleate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H2O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C12H21O14P</p>
+            <p>FORMULA: C4H2O4</p>
             <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_malt6p_c">
+            <rdf:Description rdf:about="#M_male_c">
               <bqbiol:is>
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+      <species metaid="M_malm_c" sboTerm="SBO:0000247" id="M_malm_c" name="Maleamate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H4NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C12H22O11</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C4H4NO3</p>
+            <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
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+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01596"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29045"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEAMATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01123"/>
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+      <species metaid="M_malt6p_c" sboTerm="SBO:0000247" id="M_malt6p_c" name="Maltose 6&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H21O14P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C12H22O11</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C12H21O14P</p>
+            <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_malt_e">
+            <rdf:Description rdf:about="#M_malt6p_c">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00179"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:111006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14569"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15703"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:91177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10519"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ITPHOIFCAFNCLL-ASMJPISFSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01919"/>
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-      <species metaid="M_malt_p" sboTerm="SBO:0000247" id="M_malt_p" name="Maltose C12H22O11" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+      <species metaid="M_malt_c" sboTerm="SBO:0000247" id="M_malt_c" name="Maltose C12H22O11" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C12H22O11</p>
@@ -32808,7 +34610,87 @@
         </notes>
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-            <rdf:Description rdf:about="#M_malt_p">
+            <rdf:Description rdf:about="#M_malt_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-868706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10300"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18167"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00275"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUBGYTABKSRVRQ-PICCSMPSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALPHA-MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00665"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_malt_e" sboTerm="SBO:0000247" id="M_malt_e" name="Maltose C12H22O11" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-868706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00897"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17306"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00275"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUBGYTABKSRVRQ-PICCSMPSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALPHA-MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00665"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_malt_p" sboTerm="SBO:0000247" id="M_malt_p" name="Maltose C12H22O11" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malt_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188986"/>
@@ -33621,6 +35503,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mdhdhf_c" sboTerm="SBO:0000247" id="M_mdhdhf_c" name="(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H8O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mdhdhf_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CCVJVKWZZMMBHB-WVZVXSGGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-10773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM9407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd22811"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_melib_c" sboTerm="SBO:0000247" id="M_melib_c" name="Melibiose C12H22O11" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34159,6 +36065,106 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_metox__R_c" sboTerm="SBO:0000247" id="M_metox__R_c" name="L methionine R oxide C5H11NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+      <species metaid="M_metox__R_e" sboTerm="SBO:0000247" id="M_metox__R_e" name="L methionine R oxide C5H11NO3S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_metox__R_e">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11576"/>
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+      <species metaid="M_metox_c" sboTerm="SBO:0000247" id="M_metox_c" name="L Methionine S oxide C5H11NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-Methionine-sulfoxides"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd29319"/>
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+      <species metaid="M_metox_e" sboTerm="SBO:0000247" id="M_metox_e" name="L Methionine S oxide C5H11NO3S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_metox_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-Methionine-sulfoxides"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2246"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-YGVKFDHGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd29319"/>
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+              </bqbiol:is>
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35673,105 +37679,6 @@
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: N2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: N2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: N2</p>
-            <p>SBOTerm: SBO:0000247</p>
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-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36346,73 +38253,100 @@
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+      <species metaid="M_nfmalm_c" sboTerm="SBO:0000247" id="M_nfmalm_c" name="N-Formyl maleamic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H4NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: H3N</p>
+            <p>FORMULA: C5H4NO4</p>
+            <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_nh3_c">
+            <rdf:Description rdf:about="#M_nfmalm_c">
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+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16741"/>
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+      <species metaid="M_nh3_c" sboTerm="SBO:0000247" id="M_nh3_c" name="Ammonia" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H3N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: H4N</p>
-            <p>CHARGE: 1</p>
+            <p>FORMULA: H3N</p>
             <p>SBOTerm: SBO:0000247</p>
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+            <rdf:Description rdf:about="#M_nh3_c">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:135980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB41827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIUM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM15"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QGZKDVFQNNGYKY-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19013"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_nh4_c" sboTerm="SBO:0000247" id="M_nh4_c" name="Ammonium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H4N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nh4_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1132163"/>
@@ -38630,6 +40564,93 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_p_xyl_c" sboTerm="SBO:0000247" id="M_p_xyl_c" name="P-methyltoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_p_xyl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3685"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/URLKBWYHVLBVBO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_p_xyl_e" sboTerm="SBO:0000247" id="M_p_xyl_e" name="P-methyltoluene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_p_xyl_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3685"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/URLKBWYHVLBVBO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_p_xyl_p" sboTerm="SBO:0000247" id="M_p_xyl_p" name="P-methyltoluene" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H10</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_p_xyl_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3685"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/URLKBWYHVLBVBO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04136"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pa120_c" sboTerm="SBO:0000247" id="M_pa120_c" name="1,2-didodecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H51O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40780,6 +42801,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pheme_e" sboTerm="SBO:0000247" id="M_pheme_e" name="Protoheme C34H30FeN4O4" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C34H30FeN4O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H30FeN4O4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pheme_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-71185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-917877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60344"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KABFMIBPWCXCRK-RGGAHWMASA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROTOHEME"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM249"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pheme_p" sboTerm="SBO:0000247" id="M_pheme_p" name="Protoheme C34H30FeN4O4" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C34H30FeN4O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H30FeN4O4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pheme_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-71185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-917877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60344"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KABFMIBPWCXCRK-RGGAHWMASA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROTOHEME"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM249"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_phnac_c" sboTerm="SBO:0000247" id="M_phnac_c" name="Phosphonoacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C2H2O5P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44459,6 +46542,31 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_s_e" sboTerm="SBO:0000247" id="M_s_e" name="Sulfur" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_s_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Elemental-Sulfur"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NINIDFKCEFEMDL-UHFFFAOYSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs4_c" sboTerm="SBO:0000247" id="M_salchs4_c" name="Salmochelin-S4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H46N3O25">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44828,6 +46936,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_scys__L_c" sboTerm="SBO:0000247" id="M_scys__L_c" name="S-Sulfo-L-cysteine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C3H6NO5S2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6NO5S2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_scys__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05824"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SULFO-CYSTEINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2428"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NOKPBJYHPHHWAN-REOHCLBHSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03456"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_sdhlam_c" sboTerm="SBO:0000247" id="M_sdhlam_c" name="S Succinyldihydrolipoamide C12H20NO4S2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H20NO4S2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47544,6 +49681,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_thmnp_c" sboTerm="SBO:0000247" id="M_thmnp_c" name="Tetrahydromonapterin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H15N5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H15N5O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_thmnp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C21007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM22017"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XHIXPVCTDRNTTC-YQVKZWHSSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_thmpp_c" sboTerm="SBO:0000247" id="M_thmpp_c" name="Thiamine diphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H16N4O7P2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47704,7 +49865,7 @@
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       </species>
-      <species metaid="M_thrp_e" sboTerm="SBO:0000247" id="M_thrp_e" name="L-Threonine O-3-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H8NO6P">
+      <species metaid="M_thrp_c" sboTerm="SBO:0000247" id="M_thrp_c" name="L-Threonine O-3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H8NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C4H8NO6P</p>
@@ -47714,7 +49875,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thrp_e">
+            <rdf:Description rdf:about="#M_thrp_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C12147"/>
@@ -47734,7 +49895,7 @@
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-      <species metaid="M_thrp_p" sboTerm="SBO:0000247" id="M_thrp_p" name="L-Threonine O-3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H8NO6P">
+      <species metaid="M_thrp_e" sboTerm="SBO:0000247" id="M_thrp_e" name="L-Threonine O-3-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H8NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C4H8NO6P</p>
@@ -47744,7 +49905,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thrp_p">
+            <rdf:Description rdf:about="#M_thrp_e">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C12147"/>
@@ -47764,38 +49925,37 @@
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         </annotation>
       </species>
-      <species metaid="M_thym_c" sboTerm="SBO:0000247" id="M_thym_c" name="Thymine C5H6N2O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2">
+      <species metaid="M_thrp_p" sboTerm="SBO:0000247" id="M_thrp_p" name="L-Threonine O-3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H8NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H6N2O2</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C4H8NO6P</p>
+            <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thym_c">
+            <rdf:Description rdf:about="#M_thrp_p">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83960"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00178"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15247"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17821"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THYMINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM386"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RWQNBRDOKXIBIV-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C12147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:31757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-THREONINE-O-3-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1492"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/USRGIUJOYOXOQJ-GBXIJSLDSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08928"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_thym_e" sboTerm="SBO:0000247" id="M_thym_e" name="Thymine C5H6N2O2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2">
+      <species metaid="M_thym_c" sboTerm="SBO:0000247" id="M_thym_c" name="Thymine C5H6N2O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H6N2O2</p>
@@ -47805,7 +49965,38 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thym_e">
+            <rdf:Description rdf:about="#M_thym_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THYMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM386"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RWQNBRDOKXIBIV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00151"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_thym_e" sboTerm="SBO:0000247" id="M_thym_e" name="Thymine C5H6N2O2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H6N2O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_thym_e">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83960"/>
@@ -48113,6 +50304,121 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_tnt_c" sboTerm="SBO:0000247" id="M_tnt_c" name="2 4 6 Trinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tnt_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tnt_e" sboTerm="SBO:0000247" id="M_tnt_e" name="2 4 6 Trinitrotoluene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tnt_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tnt_p" sboTerm="SBO:0000247" id="M_tnt_p" name="2 4 6 Trinitrotoluene" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tnt_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tntmdh_c" sboTerm="SBO:0000247" id="M_tntmdh_c" name="2 4 6 trinitrotoluene  Meisenheimer dihydride complex" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H2NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H2NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tntmdh_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tntmmh_c" sboTerm="SBO:0000247" id="M_tntmmh_c" name="2 4 6 Trinitrotoluene Meisenheimer monohydride complex" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: HNO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_tntmmh_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_tol_c" sboTerm="SBO:0000247" id="M_tol_c" name="Toluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB34168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TOLUENE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM889"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YXFVVABEGXRONW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01034"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_tol_e" sboTerm="SBO:0000247" id="M_tol_e" name="Toluene" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48841,6 +51147,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ttrcyc_c" sboTerm="SBO:0000247" id="M_ttrcyc_c" name="Tetracycline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C22H24N2O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ttrcyc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97613"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OFVLGDICTFRJMM-WESIUVDSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ttrcyc_e" sboTerm="SBO:0000247" id="M_ttrcyc_e" name="Tetracycline" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -50554,6 +52892,41 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_urcan_c" sboTerm="SBO:0000247" id="M_urcan_c" name="Urocanate C6H5N2O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H5N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H5N2O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_urcan_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02280"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62562"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LOIYMIARKYCTBW-OWOJBTEDSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UROCANATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00581"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_urdgci_c" sboTerm="SBO:0000247" id="M_urdgci_c" name="S-ureidoglycine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C3H7N3O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -50999,6 +53372,102 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_vanlt_c" sboTerm="SBO:0000247" id="M_vanlt_c" name="Vanillate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_vanlt_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VANILLATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM982"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WKOLLVMJNQIZCI-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04073"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_vanlt_e" sboTerm="SBO:0000247" id="M_vanlt_e" name="Vanillate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_vanlt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VANILLATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM982"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WKOLLVMJNQIZCI-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04073"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_vanlt_p" sboTerm="SBO:0000247" id="M_vanlt_p" name="Vanillate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_vanlt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VANILLATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM982"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WKOLLVMJNQIZCI-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04073"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xan_c" sboTerm="SBO:0000247" id="M_xan_c" name="Xanthine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H4N4O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51194,6 +53663,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xtp_c" sboTerm="SBO:0000247" id="M_xtp_c" name="XTP" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O15P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O15P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00700"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CAEFEWVYEZABLA-UUOKFMHZSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XTP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00530"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xtsn_c" sboTerm="SBO:0000247" id="M_xtsn_c" name="Xanthosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51799,6 +54297,53 @@
           <speciesReference species="M_12dgr180_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_12PPDRDH" sboTerm="SBO:0000176" id="R_12PPDRDH" name=" R Propane 1 2 diol dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_12PPDRDH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94682"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12ppd__R_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_12PPDRte" sboTerm="SBO:0000185" id="R_12PPDRte" name="Assumed Passive Diffusion into Extracellular Space" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_12PPDRte">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_12ppd__R_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12ppd__R_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_12PPDRtex" sboTerm="SBO:0000185" id="R_12PPDRtex" name="(R)-Propane-1,2-diol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51836,33 +54381,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_12PPDRtpp" sboTerm="SBO:0000185" id="R_12PPDRtpp" name="(R)-Propane-1,2-diol facilitated transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_12PPDRtpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-467"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94683"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07920"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_12ppd__R_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_12ppd__R_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_12PPDStex" sboTerm="SBO:0000185" id="R_12PPDStex" name="(S)-Propane-1,2-diol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51897,30 +54415,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_12PPDStpp" sboTerm="SBO:0000185" id="R_12PPDStpp" name="(S)-Propane-1,2-diol facilitated transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_12PPDStpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94684"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_12ppd__S_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_12ppd__S_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_13PPDH2" sboTerm="SBO:0000176" id="R_13PPDH2" name="1,3-propanediol dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53563,6 +56057,70 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3553"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2DHGLCK" sboTerm="SBO:0000176" id="R_2DHGLCK" name="Dehydrogluconokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2DHGLCK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEHYDOGLUCONOKINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01921"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn14220"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6p2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1772"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_2HH24DDH1" sboTerm="SBO:0000176" id="R_2HH24DDH1" name="2hh24dd hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2HH24DDH1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR137939"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2hh24dd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_24dhhed_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2MAHMP" sboTerm="SBO:0000176" id="R_2MAHMP" name="2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53597,6 +56155,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2PGLYCt6" sboTerm="SBO:0000185" id="R_2PGLYCt6" name="2 Phosphoglycolate transport inout via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2PGLYCt6">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05473"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2PGt6pp" sboTerm="SBO:0000185" id="R_2PGt6pp" name="D Glycerate 2 phosphate phosphate antiporter periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54255,6 +56840,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_3OADPCOAT" sboTerm="SBO:0000176" id="R_3OADPCOAT" name="3-oxoadipate CoA-transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_3OADPCOAT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.3.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-OXOADIPATE-COA-TRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94940"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02143"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_3OAR40" sboTerm="SBO:0000176" id="R_3OAR40" name="3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54680,33 +57299,56 @@
           <fbc:geneProductRef fbc:geneProduct="G_b1336"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_4HALDD" sboTerm="SBO:0000176" id="R_4HALDD" name="Aldehyde dehydrogenase  4 hydroxyphenylacetaldehyde  NAD " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_4HBALDtex" sboTerm="SBO:0000185" id="R_4HBALDtex" name="4-hydroxybenzaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_4HALDD">
+            <rdf:Description rdf:about="#R_4HBALDtex">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.53"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95006"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_4hoxpacd_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4hphac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hbald_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4HBAt" sboTerm="SBO:0000185" id="R_4HBAt" name="MNXR68734" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4HBAt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_4HBZt3pp" sboTerm="SBO:0000185" id="R_4HBZt3pp" name="4-hydroxybenzoate transport out via antiporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -54806,6 +57448,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4HOXPACMOF" sboTerm="SBO:0000176" id="R_4HOXPACMOF" name="4 hydroxyphenylacetate 3 monooxygenase FADH2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HOXPACMOF">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.14.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95018"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hphac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhpha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_4HOXPACt2pp" sboTerm="SBO:0000185" id="R_4HOXPACt2pp" name="4 hydroxyphenylacetate transport in via proton symport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55328,6 +57999,71 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0159"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_5MTRtex" sboTerm="SBO:0000185" id="R_5MTRtex" name="5-Methylthio-D-ribose transport via proton diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_5MTRtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95091"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5mtr_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5mtr_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_5MTRtpp" sboTerm="SBO:0000185" id="R_5MTRtpp" name="5-Methylthio-D-ribose transport via proton symport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_5MTRtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05481"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5mtr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5mtr_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_6APAt1" sboTerm="SBO:0000185" id="R_6APAt1" name="6 aminopenicillanic acid transport via outer membrane porin" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55360,6 +58096,44 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_6HNACMO" sboTerm="SBO:0000176" id="R_6HNACMO" name="6 hydroxynicotinic acid monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_6HNACMO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.13.114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-7573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12746"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_A5PISO" sboTerm="SBO:0000176" id="R_A5PISO" name="Arabinose-5-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55398,6 +58172,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AAAN" sboTerm="SBO:0000176" id="R_AAAN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AAAN">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AACPS1" sboTerm="SBO:0000176" id="R_AACPS1" name="Acyl-[acyl-carrier-protein] synthetase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55549,6 +58350,44 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AACTOOR" sboTerm="SBO:0000176" id="R_AACTOOR" name="Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AACTOOR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMACETOXID-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01833"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mthgxl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AAMYL" sboTerm="SBO:0000176" id="R_AAMYL" name="Alpha-amylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56581,6 +59420,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACALDt" sboTerm="SBO:0000185" id="R_ACALDt" name="Acetaldehyde reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACALDtex" sboTerm="SBO:0000185" id="R_ACALDtex" name="Acetaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56620,6 +59491,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACALDtpp" sboTerm="SBO:0000185" id="R_ACALDtpp" name="Acetaldehyde reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACCOAC" sboTerm="SBO:0000176" id="R_ACCOAC" name="Acetyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -57290,28 +60193,31 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACLS_b" sboTerm="SBO:0000176" id="R_ACLS_b" name="Acetolactate synthase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACLS_a" sboTerm="SBO:0000176" id="R_ACLS_a" name="Acetolactate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ACLS_b">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACLS_a">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95272"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_alac__S_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_thmpp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_hethmpp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ACM6PH" sboTerm="SBO:0000176" id="R_ACM6PH" name="N-acetylmuramate 6-phosphate hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -58275,41 +61181,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3957"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACONCtex" sboTerm="SBO:0000185" id="R_ACONCtex" name="Cisaconitat transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACONCt4pp" sboTerm="SBO:0000185" id="R_ACONCt4pp" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACONCtex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95381"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12788"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ACONCt4pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
-          </fbc:or>
-        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACONCtupp" sboTerm="SBO:0000185" id="R_ACONCtupp" name="Cisaconitate transport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACONCtex" sboTerm="SBO:0000185" id="R_ACONCtex" name="Cisaconitat transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -58317,7 +61213,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACONCtupp">
+            <rdf:Description rdf:about="#R_ACONCtex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95381"/>
@@ -58328,11 +61224,20 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ACONT" sboTerm="SBO:0000176" id="R_ACONT" name="Aconitate hydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -58922,6 +61827,32 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ACSPHAC140" sboTerm="SBO:0000176" id="R_ACSPHAC140" name="R 3 Hydroxyacid Acyl CoA Synthetase  C140 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ACSPHAC140">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3httdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ACTD2" sboTerm="SBO:0000176" id="R_ACTD2" name="Acetoin dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58954,6 +61885,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0686"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACTD_1" sboTerm="SBO:0000176" id="R_ACTD_1" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ACTD_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_diact_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2137"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACTNabc" sboTerm="SBO:0000185" id="R_ACTNabc" name="Acetoin transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -59214,6 +62173,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ADCPS2" sboTerm="SBO:0000176" id="R_ADCPS2" name="Adenosylcobinamide-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADCPS2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.1.10"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-6261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04384"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_adcobhex_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_applp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ADCS" sboTerm="SBO:0000176" id="R_ADCS" name="4-amino-4-deoxychorismate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -59819,6 +62815,70 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0411"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ADOCBIAH" sboTerm="SBO:0000176" id="R_ADOCBIAH" name="MNXR85327" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADOCBIAH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.90"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:R346-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03541"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adcobhex_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ADOCBIK" sboTerm="SBO:0000176" id="R_ADOCBIK" name="Adenosyl cobinamide kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADOCBIK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:COBINAMIDEKIN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95465"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03536"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1993"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ADPGLC" sboTerm="SBO:0000176" id="R_ADPGLC" name="ADPglucose diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -59941,6 +63001,92 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0469"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ADSELK" sboTerm="SBO:0000176" id="R_ADSELK" name="Adenylyl-selenate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADSELK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95491"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_adsel_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3padsel_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ADSELR" sboTerm="SBO:0000176" id="R_ADSELR" name="Phosphoadenylyl selenate reductase  thioredoxin " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ADSELR">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3padsel_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0492"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ADSELR2" sboTerm="SBO:0000176" id="R_ADSELR2" name="Phosphoadenylyl selenate reductase  glutaredoxin " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ADSELR2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3padsel_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_grxrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_grxox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2673"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ADSK" sboTerm="SBO:0000176" id="R_ADSK" name="Adenylyl-sulfate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60162,6 +63308,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_b4177"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ADtr" sboTerm="SBO:0000185" id="R_ADtr" name="Acetamide transport, extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADtr">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10936"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ad_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AEPTA" sboTerm="SBO:0000176" id="R_AEPTA" name="2 aminoethylphosphonate pyruvate transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -62442,6 +65613,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ALDD31" sboTerm="SBO:0000176" id="R_ALDD31" name="Aminoacetaldehyde oxidation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ALDD31">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05735"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ALDD3y" sboTerm="SBO:0000176" id="R_ALDD3y" name="Aldehyde dehydrogenase (propanal, NADP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -63348,6 +66548,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AMID4" sboTerm="SBO:0000176" id="R_AMID4" name="Amidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMID4">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/45051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00231"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0219"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AMMQLT8" sboTerm="SBO:0000176" id="R_AMMQLT8" name="S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -63879,6 +67116,101 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_APATr" sboTerm="SBO:0000176" id="R_APATr" name="B alanine pyruvate aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_APATr">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.6.1.18-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-909776"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-909762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00907"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00656"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_msa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_APCt6" sboTerm="SBO:0000185" id="R_APCt6" name="Ampicilin  transport out via proton antiport TtgABC system  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_APCt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_APCtex" sboTerm="SBO:0000185" id="R_APCtex" name="Ampicilin transport  extracellular " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_APCtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_apc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_apc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_APG3PAT160" sboTerm="SBO:0000176" id="R_APG3PAT160" name="Acyl-phosphate:glycerol-3-phosphate acyltransferase (C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64029,6 +67361,45 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0968"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_APPLDHr" sboTerm="SBO:0000176" id="R_APPLDHr" name="Aminopropanol dehydrogenase reversible" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_APPLDHr">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.75"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16518"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.37"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMINOPROPDEHYDROG-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02667"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3945"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_APRAUR" sboTerm="SBO:0000176" id="R_APRAUR" name="5-amino-6-(5-phosphoribosylamino)uracil reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64233,6 +67604,28 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0062"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ARBT6Pt" sboTerm="SBO:0000185" id="R_ARBT6Pt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ARBT6Pt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_arbt6p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_arbt6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ARBTpts" sboTerm="SBO:0000185" id="R_ARBTpts" name="Arbutin transport via PEPPyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -65958,6 +69351,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2574"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ASPR" sboTerm="SBO:0000176" id="R_ASPR" name="Aspartate racemase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASPR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14975"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.1.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASPARTATE-RACEMASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00348"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_asp__D_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2840"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ASPT" sboTerm="SBO:0000176" id="R_ASPT" name="L-aspartase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66444,6 +69872,45 @@
           <fbc:geneProductRef fbc:geneProduct="G_b1539"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ATPHs" sboTerm="SBO:0000176" id="R_ATPHs" name="ATP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ATPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATP-DEAMINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00064"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ATPPRT" sboTerm="SBO:0000176" id="R_ATPPRT" name="ATP phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66620,6 +70087,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_BCT1_syn" sboTerm="SBO:0000185" id="R_BCT1_syn" name="Bicarbonate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_BCT1_syn">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96227"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0490"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_BETALDHx" sboTerm="SBO:0000176" id="R_BETALDHx" name="Betaine-aldehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66923,7 +70422,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_BTS2" sboTerm="SBO:0000176" id="R_BTS2" name="Biotin synthase (ala-L producing)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_BTS3r" sboTerm="SBO:0000176" id="R_BTS3r" name="Biotin synthase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -66931,24 +70430,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_BTS2">
+            <rdf:Description rdf:about="#R_BTS3r">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96341"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138148"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_dtbt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_s_c" stoichiometry="2" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_btn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_BTS4" sboTerm="SBO:0000176" id="R_BTS4" name="Biotin synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -67012,57 +70510,6 @@
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_BUPN" sboTerm="SBO:0000176" id="R_BUPN" name="Beta-ureidopropionase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_BUPN">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:BETA-UREIDOPROPIONASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-73591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00905"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00654"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_cala_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_BUTCT" sboTerm="SBO:0000176" id="R_BUTCT" name="Acetyl-CoA:butyrate-CoA transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67284,6 +70731,9 @@
         <listOfProducts>
           <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_BZt1pp" sboTerm="SBO:0000185" id="R_BZt1pp" name="Benzoate transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -67347,28 +70797,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
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+      <reaction metaid="R_CA2abc" sboTerm="SBO:0000185" id="R_CA2abc" name="Calcium transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_C4HP">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CA2abc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18105#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18106#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18107#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18108#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10447"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4hoxpacd_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_CA2t3pp" sboTerm="SBO:0000185" id="R_CA2t3pp" name="Calcium (Ca+2) transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -67760,6 +71223,9 @@
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_CBMKr" sboTerm="SBO:0000176" id="R_CBMKr" name="Carbamate kinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -68617,31 +72083,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CH4St" sboTerm="SBO:0000185" id="R_CH4St" name="Methanethiol diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_CH4St">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10470"/>
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-          <speciesReference species="M_ch4s_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ch4s_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_CHLabc" sboTerm="SBO:0000185" id="R_CHLabc" name="Choline transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70141,6 +73582,99 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0490"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CMCMSAD" sboTerm="SBO:0000176" id="R_CMCMSAD" name="4 carboxy 2 hydroxymuconate 6 semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMCMSAD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHMS-DEHYDROGENASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03055"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cmhmsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cmhm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMHMI" sboTerm="SBO:0000176" id="R_CMHMI" name="5 carboxymethyl 2 hydroxymuconate delta isomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMHMI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.3.10"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR142618"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03040"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cmhm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cohe_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMLDC" sboTerm="SBO:0000176" id="R_CMLDC" name="4 carboxymuconolactone decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMLDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.44"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02483"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4cml_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CMPtex" sboTerm="SBO:0000185" id="R_CMPtex" name="CMP transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70177,6 +73711,65 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CMt2ex" sboTerm="SBO:0000185" id="R_CMt2ex" name="Chloramphenicol extrusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMt2ex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CMt2ppi" sboTerm="SBO:0000185" id="R_CMt2ppi" name="Chloramphenicol transport via diffusion  periplasm to cytosol " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMt2ppi">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cm_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CMtex" sboTerm="SBO:0000185" id="R_CMtex" name="Chloramphenicol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70214,6 +73807,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CMtexabc" sboTerm="SBO:0000185" id="R_CMtexabc" name="Chloramphenicol extrusion via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMtexabc">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cm_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0792"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CMtpp" sboTerm="SBO:0000185" id="R_CMtpp" name="Chloramphenicol transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70263,6 +73886,96 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2t" sboTerm="SBO:0000185" id="R_CO2t" name="CO2 transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70359,9 +74072,100 @@
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             <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
             <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2tpp" sboTerm="SBO:0000185" id="R_CO2tpp" name="CO2 transporter via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tpp">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_COB1NDAAT1" sboTerm="SBO:0000176" id="R_COB1NDAAT1" name="Cob I yrinate a c diamide adenosyltransferase 1" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74392,6 +78196,9 @@
           <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DB4PS" sboTerm="SBO:0000176" id="R_DB4PS" name="3,4-Dihydroxy-2-butanone-4-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -75453,34 +79260,6 @@
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         </fbc:geneProductAssociation>
       </reaction>
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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-        <listOfReactants>
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-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_dha_c" stoichiometry="1" constant="true"/>
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       <reaction metaid="R_DHBD" sboTerm="SBO:0000176" id="R_DHBD" name="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75560,7 +79339,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0594"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHBSH" sboTerm="SBO:0000176" id="R_DHBSH" name="2,3-dihydroxybenzoylserine hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHBSH_1" sboTerm="SBO:0000176" id="R_DHBSH_1" name="2 3 dihydroxybenzoylserine hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -75568,7 +79347,7 @@
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-            <rdf:Description rdf:about="#R_DHBSH">
+            <rdf:Description rdf:about="#R_DHBSH_1">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97370"/>
@@ -75852,6 +79631,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2478"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHEDAA" sboTerm="SBO:0000176" id="R_DHEDAA" name="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHEDAA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.52"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01203"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_24dhhed_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sucsal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2245"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHFR" sboTerm="SBO:0000176" id="R_DHFR" name="Dihydrofolate reductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75947,6 +79759,64 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2315"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHGLYH" sboTerm="SBO:0000176" id="R_DHGLYH" name="Dehydroglycine Hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DHGLYH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhgly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DHMPTR" sboTerm="SBO:0000176" id="R_DHMPTR" name="Dihydromonapterin reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHMPTR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97405"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1606"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHNAOT4" sboTerm="SBO:0000176" id="R_DHNAOT4" name="1,4-dihydroxy-2-naphthoate octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76210,6 +80080,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHPDO" sboTerm="SBO:0000176" id="R_DHPDO" name="3 4 dihydroxyphenylacetate 2 3 dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPDO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.13.11.15-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02366"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_34dhpha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5cmhmsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHPM1" sboTerm="SBO:0000176" id="R_DHPM1" name="Dihydropyrimidinase (5,6-dihydrouracil)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76407,6 +80311,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3177"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHPTDCs2" sboTerm="SBO:0000176" id="R_DHPTDCs2" name="4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPTDCs2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35157"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97442"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhptd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHQS" sboTerm="SBO:0000176" id="R_DHQS" name="3-dehydroquinate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76482,6 +80418,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DIACTt" sboTerm="SBO:0000185" id="R_DIACTt" name="Diacetyl diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DIACTt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_diact_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_diact_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DIMPtex" sboTerm="SBO:0000185" id="R_DIMPtex" name="DIMP transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76699,6 +80657,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3553"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DKGLCNR3" sboTerm="SBO:0000176" id="R_DKGLCNR3" name="2 5 diketo D gluconate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DKGLCNR3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_25dkglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1406"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DLMETR" sboTerm="SBO:0000176" id="R_DLMETR" name="Methionine racemase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77090,6 +81076,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DNTAep" sboTerm="SBO:0000185" id="R_DNTAep" name="N N bis 3 5 dinitrotolyl  amine extrusion pump" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DNTAep">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_35dnta_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2075"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DNTPPA" sboTerm="SBO:0000176" id="R_DNTPPA" name="Dihydroneopterin triphosphate pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77353,6 +81369,105 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DRBK" sboTerm="SBO:0000176" id="R_DRBK" name="Deoxyribokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DRBK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01987"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_drib_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dr5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_DRIBabc" sboTerm="SBO:0000185" id="R_DRIBabc" name="Deoxyribose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DRIBabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05549"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_drib_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_drib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_b2546"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b3753"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DRIBtex" sboTerm="SBO:0000185" id="R_DRIBtex" name="Deoxyribose transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DRIBtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97783"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_drib_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_drib_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DRIBtex_1" sboTerm="SBO:0000185" id="R_DRIBtex_1" name="5-Deoxy-D-ribose transport by diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77375,6 +81490,33 @@
           <speciesReference species="M_5drib_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_DRIBtpp" sboTerm="SBO:0000185" id="R_DRIBtpp" name="Deoxy D ribose transport via proton symport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DRIBtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12579"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_drib_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_drib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DRPA" sboTerm="SBO:0000176" id="R_DRPA" name="Deoxyribose-phosphate aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -78206,28 +82348,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DXYLONtpp" sboTerm="SBO:0000185" id="R_DXYLONtpp" name="D-xylonate reversible tranposrt (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_DXYLONtpp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_dxylnt_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_dxylnt_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_DXYLTD" sboTerm="SBO:0000176" id="R_DXYLTD" name="D-xylonate dehydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -79426,6 +83546,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETOHtrpp" sboTerm="SBO:0000185" id="R_ETOHtrpp" name="Ethanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09764"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_F1PP" sboTerm="SBO:0000176" id="R_F1PP" name="D-fructose 1-phosphate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -79686,6 +83841,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0404"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FACOAE100" sboTerm="SBO:0000176" id="R_FACOAE100" name="Fatty-acid-CoA thioesterase (decanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FACOAE100">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99127"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dcacoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0452"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FACOAE120" sboTerm="SBO:0000176" id="R_FACOAE120" name="Fatty-acid-CoA thioesterase (dodecanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80721,6 +84907,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FALDtpp" sboTerm="SBO:0000185" id="R_FALDtpp" name="Formaldehyde transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08462"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FALDtpp2" sboTerm="SBO:0000185" id="R_FALDtpp2" name="Formaldehyde extrusion  pp " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80784,6 +84999,73 @@
         <listOfProducts>
           <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FAS120" sboTerm="SBO:0000176" id="R_FAS120" name="Fatty acid synthase  n C120 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FAS120">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.85"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99386"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FAS160" sboTerm="SBO:0000176" id="R_FAS160" name="Fatty acid synthase  n C160 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FAS160">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.85"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99396"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_malcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
       </reaction>
       <reaction metaid="R_FBA" sboTerm="SBO:0000176" id="R_FBA" name="Fructose-bisphosphate aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -81795,6 +86077,61 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3040"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3DCITCH" sboTerm="SBO:0000176" id="R_FE3DCITCH" name="Ferric dicitrate chelation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3DCITCH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FE3DCITR5" sboTerm="SBO:0000176" id="R_FE3DCITR5" name="Ferric-dicitrate reductase via nadph" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3DCITR5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3dcit_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cit_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3070"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3DCITabcpp" sboTerm="SBO:0000185" id="R_FE3DCITabcpp" name="Iron transport from ferric-dicitrate via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82116,6 +86453,32 @@
           <speciesReference species="M_pyovd_kt_p" stoichiometry="2" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine complex formation  P putida KT2440 specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3PYOVDL2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3Ri" sboTerm="SBO:0000176" id="R_FE3Ri" name="Fe(III) reduction" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82867,7 +87230,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FESD1s" sboTerm="SBO:0000176" id="R_FESD1s" name="Iron-sulfur cluster damage (peroxide, spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FESD2s" sboTerm="SBO:0000176" id="R_FESD2s" name="Iron-sulfur cluster damage (nitrous oxide, spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -82875,10 +87238,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FESD1s">
+            <rdf:Description rdf:about="#R_FESD2s">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99586"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -82886,14 +87249,18 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_4fe4s_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_no_c" stoichiometry="2" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_3fe4s_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_fe3_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FESR" sboTerm="SBO:0000176" id="R_FESR" name="Iron-sulfur cluster repair" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -83381,31 +87748,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FOAMtrpp" sboTerm="SBO:0000185" id="R_FOAMtrpp" name="Formamide transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FOAMtrpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13708"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_frmd_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_frmd_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_FOMETRi" sboTerm="SBO:0000176" id="R_FOMETRi" name="Aminomethyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83479,6 +87821,28 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2374"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FORGLUt" sboTerm="SBO:0000185" id="R_FORGLUt" name="Transport of N-Formimidoyl-L-Glutamate" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FORGLUt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_forglu_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_forglu_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FORt2pp" sboTerm="SBO:0000185" id="R_FORt2pp" name="Formate transport via proton symport (uptake only, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -84361,6 +88725,56 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FUMAC" sboTerm="SBO:0000176" id="R_FUMAC" name="Fumarylacetoacetase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FUMAC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.7.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:FUMARYLACETOACETASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-71181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00993"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4fumacac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FUMt1pp" sboTerm="SBO:0000185" id="R_FUMt1pp" name="Fumarate transport via diffusion in (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85586,6 +90000,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_G5SD" sboTerm="SBO:0000176" id="R_G5SD" name="Glutamate-5-semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -87568,6 +91985,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_b1045"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GDOCBIK" sboTerm="SBO:0000176" id="R_GDOCBIK" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GDOCBIK">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GDPDPK" sboTerm="SBO:0000176" id="R_GDPDPK" name="GDP diphosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -89251,33 +93693,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLUDy_1" sboTerm="SBO:0000176" id="R_GLUDy_1" name="Glutamate dehydrogenase (NADP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_GLUDy_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLUN" sboTerm="SBO:0000176" id="R_GLUN" name="Glutaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91446,7 +95861,10 @@
           <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b3927"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b3927"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_GLYK" sboTerm="SBO:0000176" id="R_GLYK" name="Glycerol kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -93358,6 +97776,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2784"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GTPHs" sboTerm="SBO:0000176" id="R_GTPHs" name="GTP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GTPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08679"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GTPtex" sboTerm="SBO:0000185" id="R_GTPtex" name="GTP transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93768,9 +98217,157 @@
             <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
             <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
             <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_H2Ot" sboTerm="SBO:0000185" id="R_H2Ot" name="H2O transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2Ot">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-432065"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_H2Otex" sboTerm="SBO:0000185" id="R_H2Otex" name="H2O transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -93928,6 +98525,7 @@
             <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
             <fbc:geneProductRef fbc:geneProduct="G_b3875"/>
             <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -94075,7 +98673,41 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b0875"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0875"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2St1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2Stex" sboTerm="SBO:0000185" id="R_H2Stex" name="H2s transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -94116,7 +98748,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_H2td" sboTerm="SBO:0000185" id="R_H2td" name="Hydrogen transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2tex" sboTerm="SBO:0000185" id="R_H2tex" name="Hydrogen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -94124,7 +98756,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_H2td">
+            <rdf:Description rdf:about="#R_H2tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100495"/>
@@ -94137,13 +98769,25 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_H2tex" sboTerm="SBO:0000185" id="R_H2tex" name="Hydrogen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2tpp" sboTerm="SBO:0000185" id="R_H2tpp" name="Hydrogen transport diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -94151,7 +98795,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_H2tex">
+            <rdf:Description rdf:about="#R_H2tpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100495"/>
@@ -94164,22 +98808,13 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_HACD1" sboTerm="SBO:0000176" id="R_HACD1" name="3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -95360,9 +99995,52 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_b0126"/>
             <fbc:geneProductRef fbc:geneProduct="G_b0339"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HCO3tex" sboTerm="SBO:0000185" id="R_HCO3tex" name="Bicarbonate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HCO3tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13310"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hco3_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HCYSMT" sboTerm="SBO:0000176" id="R_HCYSMT" name="Homocysteine S-methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95543,6 +100221,60 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2344"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HEMEOS" sboTerm="SBO:0000176" id="R_HEMEOS" name="Heme O synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HEMEOS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2995330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07411"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_frdp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hemeO_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0428"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HETZK" sboTerm="SBO:0000176" id="R_HETZK" name="Hydroxyethylthiazole kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95625,42 +100357,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HEX4" sboTerm="SBO:0000176" id="R_HEX4" name="Hexokinase (D-mannose:ATP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_HEX4">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MANNKIN-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01326"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00975"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_HEX7" sboTerm="SBO:0000176" id="R_HEX7" name="Hexokinase (D-fructose:ATP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95829,6 +100525,77 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HG2tppi" sboTerm="SBO:0000185" id="R_HG2tppi" name="Mercury  Hg2  transport via diffusion  periplasm to cytoplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HG2tppi">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_HGNTOR" sboTerm="SBO:0000176" id="R_HGNTOR" name="Homogentisateoxygen 1 2 oxidoreductase  decyclizing " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HGNTOR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HOMOGENTISATE-12-DIOXYGENASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-71164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01825"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hgentis_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4mlacac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HGt" sboTerm="SBO:0000185" id="R_HGt" name="Mercury transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95859,6 +100626,53 @@
           <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_HISDr" sboTerm="SBO:0000176" id="R_HISDr" name="Histidase r" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HISDr">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HISTIDINE-AMMONIA-LYASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00867"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_his__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_urcan_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HISTD" sboTerm="SBO:0000176" id="R_HISTD" name="Histidinol dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -96359,6 +101173,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HPHACA" sboTerm="SBO:0000176" id="R_HPHACA" name="2--hydroxyphenylacetate hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HPHACA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2hyoxplac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hgentis_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HPPK2" sboTerm="SBO:0000176" id="R_HPPK2" name="6-hydroxymethyl-dihydropterin pyrophosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97489,41 +102330,31 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ICITtex" sboTerm="SBO:0000185" id="R_ICITtex" name="Citrate transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ICITt4pp" sboTerm="SBO:0000185" id="R_ICITt4pp" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ICITtex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100788"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12803"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ICITt4pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
-          </fbc:or>
-        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ICITtupp" sboTerm="SBO:0000185" id="R_ICITtupp" name="Isocitrate transport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ICITtex" sboTerm="SBO:0000185" id="R_ICITtex" name="Citrate transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -97531,7 +102362,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ICITtupp">
+            <rdf:Description rdf:about="#R_ICITtex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100788"/>
@@ -97542,11 +102373,20 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_icit_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_icit_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_icit_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ICL" sboTerm="SBO:0000176" id="R_ICL" name="Isocitrate lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -99167,6 +104007,55 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_IZPN" sboTerm="SBO:0000176" id="R_IZPN" name="Imidazolonepropionase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_IZPN">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:IMIDAZOLONEPROPIONASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01642"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4izp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_forglu_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b4328"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_K2L4Aabcpp" sboTerm="SBO:0000185" id="R_K2L4Aabcpp" name="KDO(2)-lipid IV A transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102237,6 +107126,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_L_LACD" sboTerm="SBO:0000176" id="R_L_LACD" name="L LACD" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_L_LACD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101095"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ficytc_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_lac__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_focytc_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_L_LACD2" sboTerm="SBO:0000176" id="R_L_LACD2" name="L-Lactate dehydrogenase (ubiquinone)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102454,6 +107369,59 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3600"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MACACI" sboTerm="SBO:0000176" id="R_MACACI" name="Maleylacetoacetate isomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MACACI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.2.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEYLACETOACETATE-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-71173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02276"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4mlacac_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4fumacac_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b2301"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b3229"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MAL6PG" sboTerm="SBO:0000176" id="R_MAL6PG" name="Maltose 6  phosphate glucosidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102597,6 +107565,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MALEI" sboTerm="SBO:0000176" id="R_MALEI" name="Maleate cis trans isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALEI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.2.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEATE-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00803"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_male_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MALS" sboTerm="SBO:0000176" id="R_MALS" name="Malate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104641,6 +109641,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2210"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MDNTHAep" sboTerm="SBO:0000185" id="R_MDNTHAep" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline extrusion pump" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MDNTHAep">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2m35mdntha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2075"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ME1" sboTerm="SBO:0000176" id="R_ME1" name="Malic enzyme (NAD)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104922,6 +109952,7 @@
             <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
             <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
             <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -104954,6 +109985,9 @@
         <listOfProducts>
           <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MEPCT" sboTerm="SBO:0000176" id="R_MEPCT" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -105600,6 +110634,134 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_METSR_R1" sboTerm="SBO:0000176" id="R_METSR_R1" name="L methionine R oxide reductase  trdrd " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSR_R1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09940"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_metox__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_METSR_S1" sboTerm="SBO:0000176" id="R_METSR_S1" name="L methionine S oxide reductase  trdrd " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSR_S1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08918"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_metox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_METSRabc" sboTerm="SBO:0000185" id="R_METSRabc" name="L methionine R oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSRabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05614"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3463"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_METSabc" sboTerm="SBO:0000185" id="R_METSabc" name="L methionine S oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08914"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3463"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_METabc" sboTerm="SBO:0000185" id="R_METabc" name="L-methionine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106066,7 +111228,10 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b0963"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0963"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MGt2pp" sboTerm="SBO:0000185" id="R_MGt2pp" name="Magnesium transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -108137,30 +113302,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MSADC" sboTerm="SBO:0000176" id="R_MSADC" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MSADC">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_msa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MSO3abcpp" sboTerm="SBO:0000185" id="R_MSO3abcpp" name="Methanesulfonate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108247,6 +113388,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MSULR" sboTerm="SBO:0000176" id="R_MSULR" name="Metanesulfonate reductase  NADPH2 " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_MSULR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.2.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12780"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ch4s_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="3" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_mso3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="3" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MTAN" sboTerm="SBO:0000176" id="R_MTAN" name="Methylthioadenosine nucleosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108408,6 +113579,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3941"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MTHTHFSs" sboTerm="SBO:0000176" id="R_MTHTHFSs" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MTHTHFSs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101756"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mththf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MTI" sboTerm="SBO:0000176" id="R_MTI" name="Maltose trehalose isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108544,7 +113748,7 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_N2OR" sboTerm="SBO:0000176" id="R_N2OR" name="Nitrous oxide reductase (nadh)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MUCCY_kt" sboTerm="SBO:0000176" id="R_MUCCY_kt" name="3 carboxy cis cis muconate cycloisomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -108552,99 +113756,105 @@
         </notes>
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-            <rdf:Description rdf:about="#R_N2OR">
+            <rdf:Description rdf:about="#R_MUCCY_kt">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.5.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02369"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
+          <speciesReference species="M_CCbuttc_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_n2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4cml_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b0873"/>
-        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_N2Otex" sboTerm="SBO:0000185" id="R_N2Otex" name="Nitrious oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MXYLt5" sboTerm="SBO:0000185" id="R_MXYLt5" name="M xylene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08967"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MXYLt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_n2o_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_n2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
           <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_N2tex" sboTerm="SBO:0000185" id="R_N2tex" name="Nitrogen exchange, diffusion (extra-organism to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MXYLt6" sboTerm="SBO:0000185" id="R_MXYLt6" name="M xylene transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_N2tex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10577"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MXYLt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_n2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_n2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
           <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_N2trpp" sboTerm="SBO:0000185" id="R_N2trpp" name="Nitrogen exchange, diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_M_XYLtpp" sboTerm="SBO:0000185" id="R_M_XYLtpp" name="Passive diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -108652,58 +113862,87 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_N2trpp">
+            <rdf:Description rdf:about="#R_M_XYLtpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12805"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_n2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_n2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_NACODA" sboTerm="SBO:0000176" id="R_NACODA" name="N-acetylornithine deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_M_Xylt1" sboTerm="SBO:0000185" id="R_M_Xylt1" name="M xylene  outer membrane porin transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NACODA">
+            <rdf:Description rdf:about="#R_M_Xylt1">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30503"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30504"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30505"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30506"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08968"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12805"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_N2Otex" sboTerm="SBO:0000185" id="R_N2Otex" name="Nitrious oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_N2Otex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08967"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_n2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_n2o_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b3957"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NACt1pp" sboTerm="SBO:0000185" id="R_NACt1pp" name="Nicotinic acid transport via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_N2Otpp" sboTerm="SBO:0000185" id="R_N2Otpp" name="Nitrious oxide transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -108711,24 +113950,89 @@
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-            <rdf:Description rdf:about="#R_NACt1pp">
+            <rdf:Description rdf:about="#R_N2Otpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101858"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08967"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n2o_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NACHY" sboTerm="SBO:0000176" id="R_NACHY" name="Nicotinic acid 6 Hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NACHY">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12747"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
           <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b0286"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NACODA" sboTerm="SBO:0000176" id="R_NACODA" name="N-acetylornithine deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NACODA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30506"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08968"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3957"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NACtex" sboTerm="SBO:0000185" id="R_NACtex" name="Nicotinic acid transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -108778,6 +114082,44 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NACtpp" sboTerm="SBO:0000185" id="R_NACtpp" name="Nicotinic acid uptake (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NACtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-8869603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08970"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NADDP" sboTerm="SBO:0000176" id="R_NADDP" name="NAD diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109287,7 +114629,10 @@
           <speciesReference species="M_nadhx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHHS" sboTerm="SBO:0000176" id="R_NADHHS" name="NADH hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -109313,7 +114658,10 @@
           <speciesReference species="M_nadhx__S_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHNQR" sboTerm="SBO:0000185" id="R_NADHNQR" name="NADH: quinone oxidoreductas, NQR-type" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -109520,7 +114868,10 @@
           <speciesReference species="M_nadphx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHHS" sboTerm="SBO:0000176" id="R_NADPHHS" name="NADPH hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -109546,7 +114897,10 @@
           <speciesReference species="M_nadphx__S_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b1779"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHQR2" sboTerm="SBO:0000176" id="R_NADPHQR2" name="NADPH Quinone Reductase (Ubiquinone-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -110629,96 +115983,98 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4t3pp" sboTerm="SBO:0000185" id="R_NH4t3pp" name="Ammonia transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NFMLDF" sboTerm="SBO:0000176" id="R_NFMLDF" name="N Formyl maleate deformylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_NH4t3pp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NFMLDF">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101944"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12748"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_for_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b1191"/>
-        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NH3c" sboTerm="SBO:0000176" id="R_NH3c" name="Ammomnium proton dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NH4tex">
+            <rdf:Description rdf:about="#R_NH3c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101948"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4t3pp" sboTerm="SBO:0000185" id="R_NH4t3pp" name="Ammonia transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_NH4t3pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_b1191"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4tpp" sboTerm="SBO:0000185" id="R_NH4tpp" name="Ammonia reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -110726,7 +116082,70 @@
         </notes>
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-            <rdf:Description rdf:about="#R_NH4tpp">
+            <rdf:Description rdf:about="#R_NH4tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2605"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b3552"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4tpp" sboTerm="SBO:0000185" id="R_NH4tpp" name="Ammonia reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4tpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
@@ -110768,7 +116187,10 @@
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b0451"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0451"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NHFRBO" sboTerm="SBO:0000176" id="R_NHFRBO" name="NADH:flavorubredoxin oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -111980,6 +117402,9 @@
         <listOfProducts>
           <speciesReference species="M_novbcn_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NOVBCNtpp" sboTerm="SBO:0000185" id="R_NOVBCNtpp" name="Novobiocin transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -112021,30 +117446,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NOt" sboTerm="SBO:0000185" id="R_NOt" name="NO transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NOt">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101998"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_no_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_no_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_NOtex" sboTerm="SBO:0000185" id="R_NOtex" name="Nitric oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112102,6 +117503,9 @@
         <listOfProducts>
           <speciesReference species="M_no_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NPHS" sboTerm="SBO:0000176" id="R_NPHS" name="Naphthoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -113547,6 +118951,62 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2954"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP11" sboTerm="SBO:0000176" id="R_NTPP11" name="Nucleoside triphosphate pyrophosphorylase (xtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP11">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01962"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2954"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPP2" sboTerm="SBO:0000176" id="R_NTPP2" name="Nucleoside triphosphate pyrophosphorylase (gtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113846,6 +119306,63 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP9" sboTerm="SBO:0000176" id="R_NTPP9" name="Nucleoside triphosphate pyrophosphorylase (itp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP9">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00514"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2954"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPTP1" sboTerm="SBO:0000176" id="R_NTPTP1" name="Nucleoside triphosphate tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114093,7 +119610,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_O2t" sboTerm="SBO:0000185" id="R_O2t" name="O2 transport  diffusion " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -114101,7 +119618,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2t">
+            <rdf:Description rdf:about="#R_O2tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
@@ -114120,10 +119637,21 @@
           <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="O2 transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -114131,7 +119659,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2tex">
+            <rdf:Description rdf:about="#R_O2tpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
@@ -114147,20 +119675,13 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_b0241"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b0929"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1377"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b1472"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b2215"/>
-            <fbc:geneProductRef fbc:geneProduct="G_b4496"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OAADC" sboTerm="SBO:0000176" id="R_OAADC" name="Oxaloacetate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -114765,7 +120286,10 @@
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_b0073"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_b0073"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OMPDC" sboTerm="SBO:0000176" id="R_OMPDC" name="Orotidine-5&apos;-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -114961,6 +120485,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2906"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_OPTCCL" sboTerm="SBO:0000176" id="R_OPTCCL" name="5 carboxy 2 oxohept 3 enedioate decarboxylation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OPTCCL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR142617"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5cohe_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hh24dd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ORNDC" sboTerm="SBO:0000176" id="R_ORNDC" name="Ornithine Decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115466,6 +121016,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2264"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_OXOAEL" sboTerm="SBO:0000176" id="R_OXOAEL" name="3-oxoadipate enol-lactone hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_OXOAEL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.24"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-OXOADIPATE-ENOL-LACTONASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02144"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5odhf2a_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3oxoadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_OXPTNDH" sboTerm="SBO:0000176" id="R_OXPTNDH" name="Glutarate-semialdehyde:NAD+ oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -116659,6 +122243,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PCADYOX" sboTerm="SBO:0000176" id="R_PCADYOX" name="Protocatechuate 3 4 dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PCADYOX">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PROTOCATECHUATE-34-DIOXYGENASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01192"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_CCbuttc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PCNO" sboTerm="SBO:0000176" id="R_PCNO" name="Propanoyl-CoA:NADP+ 2-oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117495,36 +123113,6 @@
           <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PENAM" sboTerm="SBO:0000176" id="R_PENAM" name="Penicillin Amidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PENAM">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.11"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-17099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02871"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_peng_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_6apa_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pac_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PENGt1" sboTerm="SBO:0000185" id="R_PENGt1" name="Penicillin transport via outer membrane porin" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118349,6 +123937,77 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PGLCNDH" sboTerm="SBO:0000176" id="R_PGLCNDH" name="Phosphogluconate 2 dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PGLCNDH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.43"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01475"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_6p2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6pgc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PGLYCP" sboTerm="SBO:0000176" id="R_PGLYCP" name="Phosphoglycolate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PGLYCP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GPH-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00980"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3385"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PGM" sboTerm="SBO:0000176" id="R_PGM" name="Phosphoglycerate mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119417,6 +125076,139 @@
           <fbc:geneProductRef fbc:geneProduct="G_b1912"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PHEME2abcpp" sboTerm="SBO:0000185" id="R_PHEME2abcpp" name="Protoheme transport via ABC system  periplasm to cytosol " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PHEME2abcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PHEMEabcpp" sboTerm="SBO:0000185" id="R_PHEMEabcpp" name="Protoheme transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PHEMEabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19261#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19262#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19263#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19264#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-917979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-382560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-917979"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_b2197"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2198"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2199"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2200"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2201"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PHEMEtonex" sboTerm="SBO:0000185" id="R_PHEMEtonex" name="Heme ton dependend transport system  extracellular to periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PHEMEtonex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pheme_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_b0737"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b0738"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PHETA1" sboTerm="SBO:0000176" id="R_PHETA1" name="Phenylalanine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119463,6 +125255,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PHETHPTOX3" sboTerm="SBO:0000176" id="R_PHETHPTOX3" name="L Phenylalanine tetrahydrobiopterinoxygen oxidoreductase  Tetrahydromonapterin " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PHETHPTOX3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PHEt2rpp" sboTerm="SBO:0000185" id="R_PHEt2rpp" name="L-phenylalanine reversible transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121138,32 +126956,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PPALtpp" sboTerm="SBO:0000185" id="R_PPALtpp" name="Propanal transport via channel (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PPALtpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103071"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09170"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ppal_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PPAt4pp" sboTerm="SBO:0000185" id="R_PPAt4pp" name="Na+/Propionate symporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121756,6 +127548,43 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2599"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PPOR" sboTerm="SBO:0000176" id="R_PPOR" name="Phenylpyruvate:oxygen oxidoreductase (hydroxylating,decarboxylating)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PPOR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.27"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31109"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00999"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hyoxplac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2739"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PPPGO" sboTerm="SBO:0000176" id="R_PPPGO" name="Protoporphyrinogen oxidase (aerobic)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123506,6 +129335,30 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PTHRP" sboTerm="SBO:0000176" id="R_PTHRP" name="Phospho-threonine phosphatase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PTHRP">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thrp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PTHRpp" sboTerm="SBO:0000176" id="R_PTHRpp" name="Phospho-L-threonine phosphatase (periplasmic)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124147,6 +130000,80 @@
           <fbc:geneProductRef fbc:geneProduct="G_b2407"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PXYLt5" sboTerm="SBO:0000185" id="R_PXYLt5" name="P xylene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PXYLt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PXYLt6" sboTerm="SBO:0000185" id="R_PXYLt6" name="P xylene transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PXYLt6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PYAM5PO" sboTerm="SBO:0000176" id="R_PYAM5PO" name="Pyridoxamine 5&apos;-phosphate oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124880,6 +130807,40 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PYRDOX" sboTerm="SBO:0000176" id="R_PYRDOX" name="2 5 dihydroxypyridine dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYRDOX">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.13.11.9-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12749"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PYROX" sboTerm="SBO:0000176" id="R_PYROX" name="Pyrimidine oxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124917,7 +130878,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PYRt2rpp" sboTerm="SBO:0000185" id="R_PYRt2rpp" name="Pyruvate reversible transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PYRZAM" sboTerm="SBO:0000176" id="R_PYRZAM" name="Pyrazinamidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYRZAM">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_male_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PYRt4pp" sboTerm="SBO:0000185" id="R_PYRt4pp" name="Pyruvate transport via sodium symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -124925,28 +130920,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PYRt2rpp">
+            <rdf:Description rdf:about="#R_PYRt4pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103385"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-372359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-372342"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-372347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05469"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09717"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103387"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -124990,6 +130978,58 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_P_XYLtpp" sboTerm="SBO:0000185" id="R_P_XYLtpp" name="P methyltoluene passive diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_P_XYLtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_p_xyl_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_P_Xylt1" sboTerm="SBO:0000185" id="R_P_Xylt1" name="P xylene  outer membrane porin transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_P_Xylt1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_p_xyl_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_QMO2" sboTerm="SBO:0000176" id="R_QMO2" name="Quinol monooxygenase (Ubiquinol-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125058,6 +131098,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3029"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_QUIDHy" sboTerm="SBO:0000176" id="R_QUIDHy" name="Quinate dehydrogenase  NADP " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_QUIDHy">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_QUIN2tex" sboTerm="SBO:0000185" id="R_QUIN2tex" name="Quinate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125163,34 +131228,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_b1692"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_QUINtpp" sboTerm="SBO:0000185" id="R_QUINtpp" name="Quinateproton symport transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_QUINtpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103399"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12810"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_QULNS" sboTerm="SBO:0000176" id="R_QULNS" name="Quinolinate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125649,7 +131686,7 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_RECOAH6" sboTerm="SBO:0000176" id="R_RECOAH6" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxytetradecanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RECOAH4" sboTerm="SBO:0000176" id="R_RECOAH4" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxydecanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -125657,7 +131694,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_RECOAH6">
+            <rdf:Description rdf:about="#R_RECOAH4">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -125665,11 +131702,11 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_dc2coa_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_REPHACCOAI" sboTerm="SBO:0000176" id="R_REPHACCOAI" name="Ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -125743,6 +131780,79 @@
           <speciesReference species="M_R3hdec4e_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_RHA140tex" sboTerm="SBO:0000185" id="R_RHA140tex" name="R 3 Hydroxy acid transport diffusion C140  extracellularperiplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHA140tex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3httdca_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3httdca_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_RHA140tpp" sboTerm="SBO:0000185" id="R_RHA140tpp" name="R 3 Hydroxy acid transport diffusion C140   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHA140tpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3httdca_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3httdca_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_RHACOAR100" sboTerm="SBO:0000176" id="R_RHACOAR100" name=" 3R  3 Hydroxyacyl CoANADP oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RHACOAR100">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.36"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12767"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3odcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_RHCCE" sboTerm="SBO:0000176" id="R_RHCCE" name="S-ribosylhomocysteine cleavage enzyme" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -127593,6 +133703,34 @@
           <speciesReference species="M_salchs4_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SAOR" sboTerm="SBO:0000176" id="R_SAOR" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SAOR">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_diact_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2137"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SARCOX" sboTerm="SBO:0000176" id="R_SARCOX" name="Sarcosine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -127873,6 +134011,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SCYSSL" sboTerm="SBO:0000176" id="R_SCYSSL" name="S-sulfo-L-cysteine sulfite lyase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SCYSSL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12682"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gthrd_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_scys__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gthox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SDPDS" sboTerm="SBO:0000176" id="R_SDPDS" name="Succinyl-diaminopimelate desuccinylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -127953,6 +134120,34 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SELADT" sboTerm="SBO:0000176" id="R_SELADT" name="Selenate adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SELADT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104310"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adsel_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SELR" sboTerm="SBO:0000176" id="R_SELR" name="Selenate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129037,6 +135232,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SLCYSS" sboTerm="SBO:0000176" id="R_SLCYSS" name="O-acetyl-L-serine sulfhydrylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SLCYSS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.47"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SULFOCYS-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95415"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02246"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acser_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_scys__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b2421"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SLNTabcpp" sboTerm="SBO:0000185" id="R_SLNTabcpp" name="Selenite ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -130773,6 +137005,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_St" sboTerm="SBO:0000185" id="R_St" name="Sulfur diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_St">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_s_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TAG1PK" sboTerm="SBO:0000176" id="R_TAG1PK" name="D Tagatose 1 phosphate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131308,6 +137567,9 @@
         <listOfProducts>
           <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TDP" sboTerm="SBO:0000176" id="R_TDP" name="Thiamin pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -132067,6 +138329,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_THRPDC" sboTerm="SBO:0000176" id="R_THRPDC" name="L threonine phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_THRPDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11492"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.81"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4.1.1.81-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04385"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thrp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_applp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_THRPtex" sboTerm="SBO:0000185" id="R_THRPtex" name="Phospho-L-threonine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132365,34 +138661,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_b0473"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_THYMt3pp" sboTerm="SBO:0000185" id="R_THYMt3pp" name="Thymine transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_THYMt3pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104854"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09308"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09656"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thym_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thym_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_THYMtex" sboTerm="SBO:0000185" id="R_THYMtex" name="Thymine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132993,6 +139261,281 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3993"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TNTHAC1" sboTerm="SBO:0000176" id="R_TNTHAC1" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTHAC1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmdh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_35dnta_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTHAC2" sboTerm="SBO:0000176" id="R_TNTHAC2" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTHAC2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmdh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2m35mdntha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTR1" sboTerm="SBO:0000176" id="R_TNTR1" name="TNT nitroreductase 4 Hydroxylamino 2 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1650"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTR2" sboTerm="SBO:0000176" id="R_TNTR2" name="TNT nitroreductase 2 Hydroxylamino 4 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hadnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1650"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTR3" sboTerm="SBO:0000176" id="R_TNTR3" name="TNT nitroreductase Meisenheimer monohydride complex forming " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmmh_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TNTR4" sboTerm="SBO:0000176" id="R_TNTR4" name="TNT nitroreductase Meisenheimer dihydride complex forming " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTR4">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmmh_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tntmdh_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TNTep" sboTerm="SBO:0000185" id="R_TNTep" name="2 4 6 trinitrotoluene extrusion pump" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTep">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+            <fbc:geneProductRef fbc:geneProduct="G_b2075"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TNTtex" sboTerm="SBO:0000185" id="R_TNTtex" name="Trinitrotoluene transport via diffusion  extracellular to periplasm  irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tnt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TNTtpp" sboTerm="SBO:0000185" id="R_TNTtpp" name="Trinitrotoluene transport via diffusion  periplasm to cytosol  irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TNTtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tnt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TOLt5" sboTerm="SBO:0000185" id="R_TOLt5" name="Toluene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TOLt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TOLt6" sboTerm="SBO:0000185" id="R_TOLt6" name="Toluene transport out via proton antiport  periplasmexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133030,6 +139573,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TOLt7" sboTerm="SBO:0000185" id="R_TOLt7" name="Toluene  transport out via proton antiport  cytosolperiplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TOLt7">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1660"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TOLtex" sboTerm="SBO:0000185" id="R_TOLtex" name="Toluene  outer membrane porin transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133062,6 +139632,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TOLtpp" sboTerm="SBO:0000185" id="R_TOLtpp" name="Toluene transport via diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TOLtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12815"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_TPI" sboTerm="SBO:0000176" id="R_TPI" name="Triose-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134265,6 +140861,94 @@
           <fbc:geneProductRef fbc:geneProduct="G_b1674"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TTRCYCt2pp" sboTerm="SBO:0000185" id="R_TTRCYCt2pp" name="Tetracycline transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCt2pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TTRCYCt5" sboTerm="SBO:0000185" id="R_TTRCYCt5" name="Tetracycline transport via TtgABC  system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCt5">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b2074"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b2076"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_b3193"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3194"/>
+              <fbc:geneProductRef fbc:geneProduct="G_b3195"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TTRCYCt7pp" sboTerm="SBO:0000185" id="R_TTRCYCt7pp" name="Tetracycline Efflux  MSF " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TTRCYCt7pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttrcyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1660"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TTRCYCtex" sboTerm="SBO:0000185" id="R_TTRCYCtex" name="Tetracycline transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134386,6 +141070,46 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TYRL" sboTerm="SBO:0000176" id="R_TYRL" name="Tyrosine lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TYRL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.19"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104993"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4crsol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhgly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b3991"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TYROXDApp" sboTerm="SBO:0000176" id="R_TYROXDApp" name="Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136147,6 +142871,57 @@
           <fbc:geneProductRef fbc:geneProduct="G_b3997"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UPPN" sboTerm="SBO:0000176" id="R_UPPN" name="B-ureidopropionase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UPPN">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:BETA-UREIDOPROPIONASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-73591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00654"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cala_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala_B_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UPPRT" sboTerm="SBO:0000176" id="R_UPPRT" name="Uracil phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136392,6 +143167,50 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_URCN" sboTerm="SBO:0000176" id="R_URCN" name="Urocanase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_URCN">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.49"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UROCANATE-HYDRATASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02085"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_urcan_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4izp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UREASE" sboTerm="SBO:0000176" id="R_UREASE" name="Urea carboxylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137093,6 +143912,102 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_VANKpp" sboTerm="SBO:0000185" id="R_VANKpp" name="Vanillateproton symport transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VANKpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12816"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_vanlt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_vanlt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1690"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_VANLTtex" sboTerm="SBO:0000185" id="R_VANLTtex" name="Vanillate transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VANLTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12818"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_vanlt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_VNTDM" sboTerm="SBO:0000176" id="R_VNTDM" name="Vanillateoxygen oxidoreductase  demethylating " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VNTDM">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.13.82"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03586"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_vanlt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhbz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_b1803"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_VPAMTr" sboTerm="SBO:0000176" id="R_VPAMTr" name="Valine-pyruvate aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138536,24 +145451,24 @@
           <speciesReference species="M_2ohph_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_sink_4hba_c" sboTerm="SBO:0000632" id="R_sink_4hba_c" name="R_sink_4hba_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_sink_4crsol_c" sboTerm="SBO:0000632" id="R_sink_4crsol_c" name="R_sink_4crsol_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000632</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4crsol_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_sink_aacald_c" sboTerm="SBO:0000632" id="R_sink_aacald_c" name="R_sink_aacald_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_sink_hemeO_c" sboTerm="SBO:0000632" id="R_sink_hemeO_c" name="R_sink_hemeO_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000632</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hemeO_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_sink_lipopb_c" sboTerm="SBO:0000632" id="R_sink_lipopb_c" name="R_sink_lipopb_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -138706,6 +145621,16 @@
           <speciesReference species="M_2ddglcn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_2m35mdntha_e" sboTerm="SBO:0000627" id="R_EX_2m35mdntha_e" name="R_EX_2m35mdntha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_2pg_e" sboTerm="SBO:0000627" id="R_EX_2pg_e" name="R_EX_2pg_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138716,6 +145641,16 @@
           <speciesReference species="M_2pg_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_2pglyc_e" sboTerm="SBO:0000627" id="R_EX_2pglyc_e" name="R_EX_2pglyc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_34dhpac_e" sboTerm="SBO:0000627" id="R_EX_34dhpac_e" name="R_EX_34dhpac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138726,6 +145661,16 @@
           <speciesReference species="M_34dhpac_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_35dnta_e" sboTerm="SBO:0000627" id="R_EX_35dnta_e" name="R_EX_35dnta_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_35dnta_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_3amp_e" sboTerm="SBO:0000627" id="R_EX_3amp_e" name="R_EX_3amp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138826,6 +145771,26 @@
           <speciesReference species="M_4abzglu_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_4hba_e" sboTerm="SBO:0000627" id="R_EX_4hba_e" name="R_EX_4hba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_4hbald_e" sboTerm="SBO:0000627" id="R_EX_4hbald_e" name="R_EX_4hbald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_4hbz_e" sboTerm="SBO:0000627" id="R_EX_4hbz_e" name="R_EX_4hbz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138896,6 +145861,16 @@
           <speciesReference species="M_5mdru1p_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_5mtr_e" sboTerm="SBO:0000627" id="R_EX_5mtr_e" name="R_EX_5mtr_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_5mtr_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_6apa_e" sboTerm="SBO:0000627" id="R_EX_6apa_e" name="R_EX_6apa_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138956,6 +145931,16 @@
           <speciesReference species="M_R3hdec4e_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_R_3httdca_e" sboTerm="SBO:0000627" id="R_EX_R_3httdca_e" name="R_EX_R_3httdca_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_R_3httdca_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ac_e" sboTerm="SBO:0000627" id="R_EX_ac_e" name="R_EX_ac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139086,6 +146071,16 @@
           <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ad_e" sboTerm="SBO:0000627" id="R_EX_ad_e" name="R_EX_ad_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ad_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ade_e" sboTerm="SBO:0000627" id="R_EX_ade_e" name="R_EX_ade_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139226,6 +146221,16 @@
           <speciesReference species="M_arab__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_arbt6p_e" sboTerm="SBO:0000627" id="R_EX_arbt6p_e" name="R_EX_arbt6p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_arbt6p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_arbt_e" sboTerm="SBO:0000627" id="R_EX_arbt_e" name="R_EX_arbt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139366,16 +146371,6 @@
           <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ch4s_e" sboTerm="SBO:0000627" id="R_EX_ch4s_e" name="R_EX_ch4s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_ch4s_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_chol_e" sboTerm="SBO:0000627" id="R_EX_chol_e" name="R_EX_chol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139666,6 +146661,16 @@
           <speciesReference species="M_dha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_diact_e" sboTerm="SBO:0000627" id="R_EX_diact_e" name="R_EX_diact_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_diact_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_dimp_e" sboTerm="SBO:0000627" id="R_EX_dimp_e" name="R_EX_dimp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139716,6 +146721,16 @@
           <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_drib_e" sboTerm="SBO:0000627" id="R_EX_drib_e" name="R_EX_drib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_drib_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_dtmp_e" sboTerm="SBO:0000627" id="R_EX_dtmp_e" name="R_EX_dtmp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139946,6 +146961,16 @@
           <speciesReference species="M_for_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_forglu_e" sboTerm="SBO:0000627" id="R_EX_forglu_e" name="R_EX_forglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_forglu_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_frmd_e" sboTerm="SBO:0000627" id="R_EX_frmd_e" name="R_EX_frmd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140446,6 +147471,16 @@
           <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_hco3_e" sboTerm="SBO:0000627" id="R_EX_hco3_e" name="R_EX_hco3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_hdca_e" sboTerm="SBO:0000627" id="R_EX_hdca_e" name="R_EX_hdca_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140686,6 +147721,16 @@
           <speciesReference species="M_lyx__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_m_xyl_e" sboTerm="SBO:0000627" id="R_EX_m_xyl_e" name="R_EX_m_xyl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_m_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_mal__D_e" sboTerm="SBO:0000627" id="R_EX_mal__D_e" name="R_EX_mal__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140846,6 +147891,26 @@
           <speciesReference species="M_metglcur_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_metox__R_e" sboTerm="SBO:0000627" id="R_EX_metox__R_e" name="R_EX_metox__R_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_metox__R_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_metox_e" sboTerm="SBO:0000627" id="R_EX_metox_e" name="R_EX_metox_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_metsox_R__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_R__L_e" name="R_EX_metsox_R__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140946,16 +148011,6 @@
           <speciesReference species="M_mththf_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_n2_e" sboTerm="SBO:0000627" id="R_EX_n2_e" name="R_EX_n2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_n2_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_n2o_e" sboTerm="SBO:0000627" id="R_EX_n2o_e" name="R_EX_n2o_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141116,6 +148171,16 @@
           <speciesReference species="M_oxa_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_p_xyl_e" sboTerm="SBO:0000627" id="R_EX_p_xyl_e" name="R_EX_p_xyl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_p_xyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_pac_e" sboTerm="SBO:0000627" id="R_EX_pac_e" name="R_EX_pac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141176,6 +148241,16 @@
           <speciesReference species="M_phe__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_pheme_e" sboTerm="SBO:0000627" id="R_EX_pheme_e" name="R_EX_pheme_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_pi_e" sboTerm="SBO:0000627" id="R_EX_pi_e" name="R_EX_pi_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141406,6 +148481,16 @@
           <speciesReference species="M_rnam_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_s_e" sboTerm="SBO:0000627" id="R_EX_s_e" name="R_EX_s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_salchs4_e" sboTerm="SBO:0000627" id="R_EX_salchs4_e" name="R_EX_salchs4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141706,6 +148791,16 @@
           <speciesReference species="M_tmao_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_tnt_e" sboTerm="SBO:0000627" id="R_EX_tnt_e" name="R_EX_tnt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_tnt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_tol_e" sboTerm="SBO:0000627" id="R_EX_tol_e" name="R_EX_tol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141916,6 +149011,16 @@
           <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_vanlt_e" sboTerm="SBO:0000627" id="R_EX_vanlt_e" name="R_EX_vanlt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_xan_e" sboTerm="SBO:0000627" id="R_EX_xan_e" name="R_EX_xan_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142067,6 +149172,30 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_RECOAH6" sboTerm="SBO:0000176" id="R_RECOAH6" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxytetradecanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+            <p>GAP_FILL: M9</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RECOAH6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
     </listOfReactions>
     <fbc:listOfObjectives fbc:activeObjective="objective">
       <fbc:objective fbc:id="objective" fbc:type="maximize">
@@ -142104,6 +149233,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0929" sboTerm="SBO:0000243" fbc:id="G_b0929" fbc:name="G_b0929" fbc:label="G_b0929">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0929">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10671"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1472" sboTerm="SBO:0000243" fbc:id="G_b1472" fbc:name="G_b1472" fbc:label="G_b1472">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142153,7 +149303,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0929" sboTerm="SBO:0000243" fbc:id="G_b0929" fbc:name="G_b0929" fbc:label="G_b0929">
+      <fbc:geneProduct metaid="G_b3011" sboTerm="SBO:0000243" fbc:id="G_b3011" fbc:name="G_b3011" fbc:label="G_b3011">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142161,20 +149311,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0929">
+            <rdf:Description rdf:about="#G_b3011">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02931"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13014"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3011" sboTerm="SBO:0000243" fbc:id="G_b3011" fbc:name="G_b3011" fbc:label="G_b3011">
+      <fbc:geneProduct metaid="G_b4033" sboTerm="SBO:0000243" fbc:id="G_b4033" fbc:name="G_b4033" fbc:label="G_b4033">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142182,20 +149332,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3011">
+            <rdf:Description rdf:about="#G_b4033">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46856"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947493"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013195"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10555"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4033" sboTerm="SBO:0000243" fbc:id="G_b4033" fbc:name="G_b4033" fbc:label="G_b4033">
+      <fbc:geneProduct metaid="G_b4035" sboTerm="SBO:0000243" fbc:id="G_b4035" fbc:name="G_b4035" fbc:label="G_b4035">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142203,13 +149353,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4033">
+            <rdf:Description rdf:about="#G_b4035">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013195"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948532"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10555"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013216"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P68187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10558"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142257,27 +149407,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4035" sboTerm="SBO:0000243" fbc:id="G_b4035" fbc:name="G_b4035" fbc:label="G_b4035">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4035">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013216"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P68187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10558"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4034" sboTerm="SBO:0000243" fbc:id="G_b4034" fbc:name="G_b4034" fbc:label="G_b4034">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142452,27 +149581,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4298" sboTerm="SBO:0000243" fbc:id="G_b4298" fbc:name="G_b4298" fbc:label="G_b4298">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4298">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948825"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12550"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0268" sboTerm="SBO:0000243" fbc:id="G_b0268" fbc:name="G_b0268" fbc:label="G_b0268">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142494,6 +149602,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4298" sboTerm="SBO:0000243" fbc:id="G_b4298" fbc:name="G_b4298" fbc:label="G_b4298">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4298">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12550"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3553" sboTerm="SBO:0000243" fbc:id="G_b3553" fbc:name="G_b3553" fbc:label="G_b3553">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142515,6 +149644,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1772" sboTerm="SBO:0000243" fbc:id="G_b1772" fbc:name="G_b1772" fbc:label="G_b1772">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1772">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P50845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0446" sboTerm="SBO:0000243" fbc:id="G_b0446" fbc:name="G_b0446" fbc:label="G_b0446">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142578,7 +149731,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0180" sboTerm="SBO:0000243" fbc:id="G_b0180" fbc:name="G_b0180" fbc:label="G_b0180">
+      <fbc:geneProduct metaid="G_b0954" sboTerm="SBO:0000243" fbc:id="G_b0954" fbc:name="G_b0954" fbc:label="G_b0954">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142586,20 +149739,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0180">
+            <rdf:Description rdf:about="#G_b0954">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000613"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6Q6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6Q3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10273"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0954" sboTerm="SBO:0000243" fbc:id="G_b0954" fbc:name="G_b0954" fbc:label="G_b0954">
+      <fbc:geneProduct metaid="G_b0180" sboTerm="SBO:0000243" fbc:id="G_b0180" fbc:name="G_b0180" fbc:label="G_b0180">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142607,13 +149760,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0954">
+            <rdf:Description rdf:about="#G_b0180">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003229"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6Q3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945568"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6Q6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11284"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142659,14 +149812,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2605" sboTerm="SBO:0000243" fbc:id="G_b2605" fbc:name="G_b2605" fbc:label="G_b2605">
+      <fbc:geneProduct metaid="G_b3552" sboTerm="SBO:0000243" fbc:id="G_b3552" fbc:name="G_b3552" fbc:label="G_b3552">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3552" sboTerm="SBO:0000243" fbc:id="G_b3552" fbc:name="G_b3552" fbc:label="G_b3552">
+      <fbc:geneProduct metaid="G_b2605" sboTerm="SBO:0000243" fbc:id="G_b2605" fbc:name="G_b2605" fbc:label="G_b2605">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142715,30 +149868,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2137" sboTerm="SBO:0000243" fbc:id="G_b2137" fbc:name="G_b2137" fbc:label="G_b2137">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2137">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18B45"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18B45"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885331"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1093" sboTerm="SBO:0000243" fbc:id="G_b1093" fbc:name="G_b1093" fbc:label="G_b1093">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142778,7 +149907,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1397" sboTerm="SBO:0000243" fbc:id="G_b1397" fbc:name="G_b1397" fbc:label="G_b1397">
+      <fbc:geneProduct metaid="G_b2137" sboTerm="SBO:0000243" fbc:id="G_b2137" fbc:name="G_b2137" fbc:label="G_b2137">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142786,13 +149915,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1397">
+            <rdf:Description rdf:about="#G_b2137">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004668"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C7L2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18B45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18B45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885331"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142806,7 +149938,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1244" sboTerm="SBO:0000243" fbc:id="G_b1244" fbc:name="G_b1244" fbc:label="G_b1244">
+      <fbc:geneProduct metaid="G_b1397" sboTerm="SBO:0000243" fbc:id="G_b1397" fbc:name="G_b1397" fbc:label="G_b1397">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142814,20 +149946,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1244">
+            <rdf:Description rdf:about="#G_b1397">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004174"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFH2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945823"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C7L2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13744"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1329" sboTerm="SBO:0000243" fbc:id="G_b1329" fbc:name="G_b1329" fbc:label="G_b1329">
+      <fbc:geneProduct metaid="G_b2179" sboTerm="SBO:0000243" fbc:id="G_b2179" fbc:name="G_b2179" fbc:label="G_b2179">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142835,13 +149967,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1329">
+            <rdf:Description rdf:about="#G_b2179">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945951"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12040"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142890,7 +150022,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1245" sboTerm="SBO:0000243" fbc:id="G_b1245" fbc:name="G_b1245" fbc:label="G_b1245">
+      <fbc:geneProduct metaid="G_b1246" sboTerm="SBO:0000243" fbc:id="G_b1246" fbc:name="G_b1246" fbc:label="G_b1246">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142898,20 +150030,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1245">
+            <rdf:Description rdf:about="#G_b1246">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFH6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945810"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10677"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2178" sboTerm="SBO:0000243" fbc:id="G_b2178" fbc:name="G_b2178" fbc:label="G_b2178">
+      <fbc:geneProduct metaid="G_b1244" sboTerm="SBO:0000243" fbc:id="G_b1244" fbc:name="G_b1244" fbc:label="G_b1244">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142919,20 +150051,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2178">
+            <rdf:Description rdf:about="#G_b1244">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFU0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946679"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFH2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10675"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2179" sboTerm="SBO:0000243" fbc:id="G_b2179" fbc:name="G_b2179" fbc:label="G_b2179">
+      <fbc:geneProduct metaid="G_b1245" sboTerm="SBO:0000243" fbc:id="G_b1245" fbc:name="G_b1245" fbc:label="G_b1245">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142940,20 +150072,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2179">
+            <rdf:Description rdf:about="#G_b1245">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946683"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFH6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10676"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1246" sboTerm="SBO:0000243" fbc:id="G_b1246" fbc:name="G_b1246" fbc:label="G_b1246">
+      <fbc:geneProduct metaid="G_b2178" sboTerm="SBO:0000243" fbc:id="G_b2178" fbc:name="G_b2178" fbc:label="G_b2178">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142961,13 +150093,34 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1246">
+            <rdf:Description rdf:about="#G_b2178">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004178"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945802"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFU0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946679"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12038"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2180" sboTerm="SBO:0000243" fbc:id="G_b2180" fbc:name="G_b2180" fbc:label="G_b2180">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2180">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12041"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142995,7 +150148,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2180" sboTerm="SBO:0000243" fbc:id="G_b2180" fbc:name="G_b2180" fbc:label="G_b2180">
+      <fbc:geneProduct metaid="G_b1329" sboTerm="SBO:0000243" fbc:id="G_b1329" fbc:name="G_b1329" fbc:label="G_b1329">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143003,13 +150156,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2180">
+            <rdf:Description rdf:about="#G_b1329">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007212"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946689"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13376"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143130,7 +150283,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3241" sboTerm="SBO:0000243" fbc:id="G_b3241" fbc:name="G_b3241" fbc:label="G_b3241">
+      <fbc:geneProduct metaid="G_b3240" sboTerm="SBO:0000243" fbc:id="G_b3240" fbc:name="G_b3240" fbc:label="G_b3240">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143138,20 +150291,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3241">
+            <rdf:Description rdf:about="#G_b3240">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010631"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46482"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12822"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3240" sboTerm="SBO:0000243" fbc:id="G_b3240" fbc:name="G_b3240" fbc:label="G_b3240">
+      <fbc:geneProduct metaid="G_b3241" sboTerm="SBO:0000243" fbc:id="G_b3241" fbc:name="G_b3241" fbc:label="G_b3241">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143159,13 +150312,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3240">
+            <rdf:Description rdf:about="#G_b3241">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12823"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143417,6 +150570,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2708" sboTerm="SBO:0000243" fbc:id="G_b2708" fbc:name="G_b2708" fbc:label="G_b2708">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2708">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10973"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3197" sboTerm="SBO:0000243" fbc:id="G_b3197" fbc:name="G_b3197" fbc:label="G_b3197">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143438,27 +150612,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2708" sboTerm="SBO:0000243" fbc:id="G_b2708" fbc:name="G_b2708" fbc:label="G_b2708">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2708">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947587"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10973"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1094" sboTerm="SBO:0000243" fbc:id="G_b1094" fbc:name="G_b1094" fbc:label="G_b1094">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143550,7 +150703,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2901" sboTerm="SBO:0000243" fbc:id="G_b2901" fbc:name="G_b2901" fbc:label="G_b2901">
+      <fbc:geneProduct metaid="G_b3721" sboTerm="SBO:0000243" fbc:id="G_b3721" fbc:name="G_b3721" fbc:label="G_b3721">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143558,20 +150711,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2901">
+            <rdf:Description rdf:about="#G_b3721">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009523"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947378"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10114"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2716" sboTerm="SBO:0000243" fbc:id="G_b2716" fbc:name="G_b2716" fbc:label="G_b2716">
+      <fbc:geneProduct metaid="G_b2901" sboTerm="SBO:0000243" fbc:id="G_b2901" fbc:name="G_b2901" fbc:label="G_b2901">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143579,20 +150732,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2716">
+            <rdf:Description rdf:about="#G_b2901">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008928"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13079"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3721" sboTerm="SBO:0000243" fbc:id="G_b3721" fbc:name="G_b3721" fbc:label="G_b3721">
+      <fbc:geneProduct metaid="G_b2716" sboTerm="SBO:0000243" fbc:id="G_b2716" fbc:name="G_b2716" fbc:label="G_b2716">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143600,13 +150753,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3721">
+            <rdf:Description rdf:about="#G_b2716">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948234"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10085"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143697,7 +150850,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1694" sboTerm="SBO:0000243" fbc:id="G_b1694" fbc:name="G_b1694" fbc:label="G_b1694">
+      <fbc:geneProduct metaid="G_b2222" sboTerm="SBO:0000243" fbc:id="G_b2222" fbc:name="G_b2222" fbc:label="G_b2222">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143705,13 +150858,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1694">
+            <rdf:Description rdf:about="#G_b2222">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37766"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12432"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946719"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11670"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143739,7 +150892,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2222" sboTerm="SBO:0000243" fbc:id="G_b2222" fbc:name="G_b2222" fbc:label="G_b2222">
+      <fbc:geneProduct metaid="G_b1694" sboTerm="SBO:0000243" fbc:id="G_b1694" fbc:name="G_b1694" fbc:label="G_b1694">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143747,13 +150900,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2222">
+            <rdf:Description rdf:about="#G_b1694">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946719"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946211"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12432"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143844,6 +150997,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2455" sboTerm="SBO:0000243" fbc:id="G_b2455" fbc:name="G_b2455" fbc:label="G_b2455">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1241" sboTerm="SBO:0000243" fbc:id="G_b1241" fbc:name="G_b1241" fbc:label="G_b1241">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143870,13 +151030,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2455" sboTerm="SBO:0000243" fbc:id="G_b2455" fbc:name="G_b2455" fbc:label="G_b2455">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0351" sboTerm="SBO:0000243" fbc:id="G_b0351" fbc:name="G_b0351" fbc:label="G_b0351">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143898,47 +151051,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3255" sboTerm="SBO:0000243" fbc:id="G_b3255" fbc:name="G_b3255" fbc:label="G_b3255">
+      <fbc:geneProduct metaid="G_spontaneous" sboTerm="SBO:0000243" fbc:id="G_spontaneous" fbc:name="G_spontaneous" fbc:label="G_spontaneous">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3255">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947758"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10275"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2316" sboTerm="SBO:0000243" fbc:id="G_b2316" fbc:name="G_b2316" fbc:label="G_b2316">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2316">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007648"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9Q5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10217"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0185" sboTerm="SBO:0000243" fbc:id="G_b0185" fbc:name="G_b0185" fbc:label="G_b0185">
         <notes>
@@ -143997,6 +151115,48 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3255" sboTerm="SBO:0000243" fbc:id="G_b3255" fbc:name="G_b3255" fbc:label="G_b3255">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3255">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10275"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2316" sboTerm="SBO:0000243" fbc:id="G_b2316" fbc:name="G_b2316" fbc:label="G_b2316">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2316">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007648"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9Q5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10217"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0335" sboTerm="SBO:0000243" fbc:id="G_b0335" fbc:name="G_b0335" fbc:label="G_b0335">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144067,38 +151227,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3206" sboTerm="SBO:0000243" fbc:id="G_b3206" fbc:name="G_b3206" fbc:label="G_b3206">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3206">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10200"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1JEM"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1KKL"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1KKM"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/1SPH"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2FEP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HID"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HPR"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OQM"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OQN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OQO"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P08877"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3947" sboTerm="SBO:0000243" fbc:id="G_b3947" fbc:name="G_b3947" fbc:label="G_b3947">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144137,7 +151265,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0679" sboTerm="SBO:0000243" fbc:id="G_b0679" fbc:name="G_b0679" fbc:label="G_b0679">
+      <fbc:geneProduct metaid="G_b3206" sboTerm="SBO:0000243" fbc:id="G_b3206" fbc:name="G_b3206" fbc:label="G_b3206">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144145,13 +151273,45 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0679">
+            <rdf:Description rdf:about="#G_b3206">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002312"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09323"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945292"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1JEM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1KKL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1KKM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/1SPH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2FEP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HID"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/2HPR"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OQM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OQN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/3OQO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P08877"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1101" sboTerm="SBO:0000243" fbc:id="G_b1101" fbc:name="G_b1101" fbc:label="G_b1101">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1101">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10787"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144185,6 +151345,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0679" sboTerm="SBO:0000243" fbc:id="G_b0679" fbc:name="G_b0679" fbc:label="G_b0679">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0679">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10635"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2417" sboTerm="SBO:0000243" fbc:id="G_b2417" fbc:name="G_b2417" fbc:label="G_b2417">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144210,27 +151391,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1101" sboTerm="SBO:0000243" fbc:id="G_b1101" fbc:name="G_b1101" fbc:label="G_b1101">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1101">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945651"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10787"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2416" sboTerm="SBO:0000243" fbc:id="G_b2416" fbc:name="G_b2416" fbc:label="G_b2416">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144294,14 +151454,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4488" sboTerm="SBO:0000243" fbc:id="G_b4488" fbc:name="G_b4488" fbc:label="G_b4488">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3671" sboTerm="SBO:0000243" fbc:id="G_b3671" fbc:name="G_b3671" fbc:label="G_b3671">
+      <fbc:geneProduct metaid="G_b0078" sboTerm="SBO:0000243" fbc:id="G_b0078" fbc:name="G_b0078" fbc:label="G_b0078">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144309,20 +151462,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3671">
+            <rdf:Description rdf:about="#G_b0078">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011999"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948182"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10499"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3670" sboTerm="SBO:0000243" fbc:id="G_b3670" fbc:name="G_b3670" fbc:label="G_b3670">
+      <fbc:geneProduct metaid="G_b3671" sboTerm="SBO:0000243" fbc:id="G_b3671" fbc:name="G_b3671" fbc:label="G_b3671">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144330,13 +151483,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3670">
+            <rdf:Description rdf:about="#G_b3671">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ADF8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10502"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10494"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144371,7 +151524,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0078" sboTerm="SBO:0000243" fbc:id="G_b0078" fbc:name="G_b0078" fbc:label="G_b0078">
+      <fbc:geneProduct metaid="G_b3670" sboTerm="SBO:0000243" fbc:id="G_b3670" fbc:name="G_b3670" fbc:label="G_b3670">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144379,20 +151532,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0078">
+            <rdf:Description rdf:about="#G_b3670">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00894"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ADF8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10502"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2296" sboTerm="SBO:0000243" fbc:id="G_b2296" fbc:name="G_b2296" fbc:label="G_b2296">
+      <fbc:geneProduct metaid="G_b4488" sboTerm="SBO:0000243" fbc:id="G_b4488" fbc:name="G_b4488" fbc:label="G_b4488">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1849" sboTerm="SBO:0000243" fbc:id="G_b1849" fbc:name="G_b1849" fbc:label="G_b1849">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144400,24 +151560,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2296">
+            <rdf:Description rdf:about="#G_b1849">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007579"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946775"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004372"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDW1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11809"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1849" sboTerm="SBO:0000243" fbc:id="G_b1849" fbc:name="G_b1849" fbc:label="G_b1849">
+      <fbc:geneProduct metaid="G_b2296" sboTerm="SBO:0000243" fbc:id="G_b2296" fbc:name="G_b2296" fbc:label="G_b2296">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144425,13 +151581,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1849">
+            <rdf:Description rdf:about="#G_b2296">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006162"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33221"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDW1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175397"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144480,7 +151640,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1817" sboTerm="SBO:0000243" fbc:id="G_b1817" fbc:name="G_b1817" fbc:label="G_b1817">
+      <fbc:geneProduct metaid="G_b1819" sboTerm="SBO:0000243" fbc:id="G_b1819" fbc:name="G_b1819" fbc:label="G_b1819">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144488,13 +151648,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1817">
+            <rdf:Description rdf:about="#G_b1819">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006054"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69797"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946334"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10569"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144522,7 +151682,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1819" sboTerm="SBO:0000243" fbc:id="G_b1819" fbc:name="G_b1819" fbc:label="G_b1819">
+      <fbc:geneProduct metaid="G_b1817" sboTerm="SBO:0000243" fbc:id="G_b1817" fbc:name="G_b1817" fbc:label="G_b1817">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144530,13 +151690,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1819">
+            <rdf:Description rdf:about="#G_b1817">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69805"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946342"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10569"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10567"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144670,7 +151830,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1697" sboTerm="SBO:0000243" fbc:id="G_b1697" fbc:name="G_b1697" fbc:label="G_b1697">
+      <fbc:geneProduct metaid="G_b1698" sboTerm="SBO:0000243" fbc:id="G_b1698" fbc:name="G_b1698" fbc:label="G_b1698">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144678,21 +151838,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1697">
+            <rdf:Description rdf:about="#G_b1698">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001308"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014730"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AQ6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AQ6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AQ5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AQ5"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1698" sboTerm="SBO:0000243" fbc:id="G_b1698" fbc:name="G_b1698" fbc:label="G_b1698">
+      <fbc:geneProduct metaid="G_b1695" sboTerm="SBO:0000243" fbc:id="G_b1695" fbc:name="G_b1695" fbc:label="G_b1695">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144700,24 +151863,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1698">
+            <rdf:Description rdf:about="#G_b1695">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001308"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014730"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018206"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029035"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AQ5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AQ5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9U8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13974"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1695" sboTerm="SBO:0000243" fbc:id="G_b1695" fbc:name="G_b1695" fbc:label="G_b1695">
+      <fbc:geneProduct metaid="G_b1697" sboTerm="SBO:0000243" fbc:id="G_b1697" fbc:name="G_b1697" fbc:label="G_b1697">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144725,13 +151884,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1695">
+            <rdf:Description rdf:about="#G_b1697">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005658"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9U8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945626"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AQ6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AQ6"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144895,7 +152055,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0844" sboTerm="SBO:0000243" fbc:id="G_b0844" fbc:name="G_b0844" fbc:label="G_b0844">
+      <fbc:geneProduct metaid="G_b3812" sboTerm="SBO:0000243" fbc:id="G_b3812" fbc:name="G_b3812" fbc:label="G_b3812">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144903,20 +152063,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0844">
+            <rdf:Description rdf:about="#G_b3812">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75809"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945470"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13678"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ADP0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11202"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0982" sboTerm="SBO:0000243" fbc:id="G_b0982" fbc:name="G_b0982" fbc:label="G_b0982">
+      <fbc:geneProduct metaid="G_b0844" sboTerm="SBO:0000243" fbc:id="G_b0844" fbc:name="G_b0844" fbc:label="G_b0844">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144924,19 +152084,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0982">
+            <rdf:Description rdf:about="#G_b0844">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11431"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS36427.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS49045.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13678"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3812" sboTerm="SBO:0000243" fbc:id="G_b3812" fbc:name="G_b3812" fbc:label="G_b3812">
+      <fbc:geneProduct metaid="G_b0982" sboTerm="SBO:0000243" fbc:id="G_b0982" fbc:name="G_b0982" fbc:label="G_b0982">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144944,13 +152105,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3812">
+            <rdf:Description rdf:about="#G_b0982">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ADP0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948357"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS36427.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS49045.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144978,7 +152138,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3475" sboTerm="SBO:0000243" fbc:id="G_b3475" fbc:name="G_b3475" fbc:label="G_b3475">
+      <fbc:geneProduct metaid="G_b2563" sboTerm="SBO:0000243" fbc:id="G_b2563" fbc:name="G_b2563" fbc:label="G_b2563">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144986,20 +152146,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3475">
+            <rdf:Description rdf:about="#G_b2563">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011351"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37623"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947979"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10247"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2563" sboTerm="SBO:0000243" fbc:id="G_b2563" fbc:name="G_b2563" fbc:label="G_b2563">
+      <fbc:geneProduct metaid="G_b3475" sboTerm="SBO:0000243" fbc:id="G_b3475" fbc:name="G_b3475" fbc:label="G_b3475">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145007,13 +152167,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2563">
+            <rdf:Description rdf:about="#G_b3475">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24224"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947037"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37623"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12221"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145063,13 +152223,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1959" sboTerm="SBO:0000243" fbc:id="G_b1959" fbc:name="G_b1959" fbc:label="G_b1959">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2578" sboTerm="SBO:0000243" fbc:id="G_b2578" fbc:name="G_b2578" fbc:label="G_b2578">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145091,6 +152244,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1959" sboTerm="SBO:0000243" fbc:id="G_b1959" fbc:name="G_b1959" fbc:label="G_b1959">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0686" sboTerm="SBO:0000243" fbc:id="G_b0686" fbc:name="G_b0686" fbc:label="G_b0686">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145307,6 +152467,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3654" sboTerm="SBO:0000243" fbc:id="G_b3654" fbc:name="G_b3654" fbc:label="G_b3654">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3654">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGM9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11194"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3714" sboTerm="SBO:0000243" fbc:id="G_b3714" fbc:name="G_b3714" fbc:label="G_b3714">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145328,27 +152509,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3654" sboTerm="SBO:0000243" fbc:id="G_b3654" fbc:name="G_b3654" fbc:label="G_b3654">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3654">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011946"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGM9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948172"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11194"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3664" sboTerm="SBO:0000243" fbc:id="G_b3664" fbc:name="G_b3664" fbc:label="G_b3664">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145412,13 +152572,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3054" sboTerm="SBO:0000243" fbc:id="G_b3054" fbc:name="G_b3054" fbc:label="G_b3054">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2856" sboTerm="SBO:0000243" fbc:id="G_b2856" fbc:name="G_b2856" fbc:label="G_b2856">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145437,6 +152590,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3054" sboTerm="SBO:0000243" fbc:id="G_b3054" fbc:name="G_b3054" fbc:label="G_b3054">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3806" sboTerm="SBO:0000243" fbc:id="G_b3806" fbc:name="G_b3806" fbc:label="G_b3806">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145479,6 +152639,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2098" sboTerm="SBO:0000243" fbc:id="G_b2098" fbc:name="G_b2098" fbc:label="G_b2098">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2393" sboTerm="SBO:0000243" fbc:id="G_b2393" fbc:name="G_b2393" fbc:label="G_b2393">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145500,13 +152667,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2098" sboTerm="SBO:0000243" fbc:id="G_b2098" fbc:name="G_b2098" fbc:label="G_b2098">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2964" sboTerm="SBO:0000243" fbc:id="G_b2964" fbc:name="G_b2964" fbc:label="G_b2964">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145549,6 +152709,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1993" sboTerm="SBO:0000243" fbc:id="G_b1993" fbc:name="G_b1993" fbc:label="G_b1993">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1993">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE76"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13238"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3034" sboTerm="SBO:0000243" fbc:id="G_b3034" fbc:name="G_b3034" fbc:label="G_b3034">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145612,6 +152793,44 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0492" sboTerm="SBO:0000243" fbc:id="G_b0492" fbc:name="G_b0492" fbc:label="G_b0492">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0492">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2673" sboTerm="SBO:0000243" fbc:id="G_b2673" fbc:name="G_b2673" fbc:label="G_b2673">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2673">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2750" sboTerm="SBO:0000243" fbc:id="G_b2750" fbc:name="G_b2750" fbc:label="G_b2750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145678,25 +152897,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4104" sboTerm="SBO:0000243" fbc:id="G_b4104" fbc:name="G_b4104" fbc:label="G_b4104">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4104">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0262" sboTerm="SBO:0000243" fbc:id="G_b0262" fbc:name="G_b0262" fbc:label="G_b0262">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145769,7 +152969,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4328" sboTerm="SBO:0000243" fbc:id="G_b4328" fbc:name="G_b4328" fbc:label="G_b4328">
+      <fbc:geneProduct metaid="G_b4104" sboTerm="SBO:0000243" fbc:id="G_b4104" fbc:name="G_b4104" fbc:label="G_b4104">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145777,22 +152977,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4328">
+            <rdf:Description rdf:about="#G_b4104">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013108"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AL1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AL1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886765"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002195"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006680"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10714"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P25995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145821,6 +153010,36 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4328" sboTerm="SBO:0000243" fbc:id="G_b4328" fbc:name="G_b4328" fbc:label="G_b4328">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4328">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AL1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AL1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002195"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P25995"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0677" sboTerm="SBO:0000243" fbc:id="G_b0677" fbc:name="G_b0677" fbc:label="G_b0677">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145884,7 +153103,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0867" sboTerm="SBO:0000243" fbc:id="G_b0867" fbc:name="G_b0867" fbc:label="G_b0867">
+      <fbc:geneProduct metaid="G_b2435" sboTerm="SBO:0000243" fbc:id="G_b2435" fbc:name="G_b2435" fbc:label="G_b2435">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145892,20 +153111,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0867">
+            <rdf:Description rdf:about="#G_b2435">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75820"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945494"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11823"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2435" sboTerm="SBO:0000243" fbc:id="G_b2435" fbc:name="G_b2435" fbc:label="G_b2435">
+      <fbc:geneProduct metaid="G_b4169" sboTerm="SBO:0000243" fbc:id="G_b4169" fbc:name="G_b4169" fbc:label="G_b4169">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145913,20 +153132,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2435">
+            <rdf:Description rdf:about="#G_b4169">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36548"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P26365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11363"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4169" sboTerm="SBO:0000243" fbc:id="G_b4169" fbc:name="G_b4169" fbc:label="G_b4169">
+      <fbc:geneProduct metaid="G_b0867" sboTerm="SBO:0000243" fbc:id="G_b0867" fbc:name="G_b0867" fbc:label="G_b0867">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145934,13 +153153,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4169">
+            <rdf:Description rdf:about="#G_b0867">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013653"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P26365"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948683"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13687"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146129,7 +153348,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1516" sboTerm="SBO:0000243" fbc:id="G_b1516" fbc:name="G_b1516" fbc:label="G_b1516">
+      <fbc:geneProduct metaid="G_b1514" sboTerm="SBO:0000243" fbc:id="G_b1514" fbc:name="G_b1514" fbc:label="G_b1514">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146137,20 +153356,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1516">
+            <rdf:Description rdf:about="#G_b1514">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945418"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946105"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13807"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1514" sboTerm="SBO:0000243" fbc:id="G_b1514" fbc:name="G_b1514" fbc:label="G_b1514">
+      <fbc:geneProduct metaid="G_b1516" sboTerm="SBO:0000243" fbc:id="G_b1516" fbc:name="G_b1516" fbc:label="G_b1516">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146158,20 +153377,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1514">
+            <rdf:Description rdf:about="#G_b1516">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77672"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946105"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13809"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1515" sboTerm="SBO:0000243" fbc:id="G_b1515" fbc:name="G_b1515" fbc:label="G_b1515">
+      <fbc:geneProduct metaid="G_b1513" sboTerm="SBO:0000243" fbc:id="G_b1513" fbc:name="G_b1513" fbc:label="G_b1513">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146179,20 +153398,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1515">
+            <rdf:Description rdf:about="#G_b1513">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFS1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13806"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1513" sboTerm="SBO:0000243" fbc:id="G_b1513" fbc:name="G_b1513" fbc:label="G_b1513">
+      <fbc:geneProduct metaid="G_b1515" sboTerm="SBO:0000243" fbc:id="G_b1515" fbc:name="G_b1515" fbc:label="G_b1515">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146200,13 +153419,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1513">
+            <rdf:Description rdf:about="#G_b1515">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005056"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945680"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFS1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13808"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146318,6 +153537,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0727" sboTerm="SBO:0000243" fbc:id="G_b0727" fbc:name="G_b0727" fbc:label="G_b0727">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0727">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFG6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10980"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0116" sboTerm="SBO:0000243" fbc:id="G_b0116" fbc:name="G_b0116" fbc:label="G_b0116">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146349,27 +153589,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0727" sboTerm="SBO:0000243" fbc:id="G_b0727" fbc:name="G_b0727" fbc:label="G_b0727">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0727">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002480"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFG6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945307"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10980"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2587" sboTerm="SBO:0000243" fbc:id="G_b2587" fbc:name="G_b2587" fbc:label="G_b2587">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146412,7 +153631,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1485" sboTerm="SBO:0000243" fbc:id="G_b1485" fbc:name="G_b1485" fbc:label="G_b1485">
+      <fbc:geneProduct metaid="G_b1290" sboTerm="SBO:0000243" fbc:id="G_b1290" fbc:name="G_b1290" fbc:label="G_b1290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146420,20 +153639,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1485">
+            <rdf:Description rdf:about="#G_b1290">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004953"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WA21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176836"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1484" sboTerm="SBO:0000243" fbc:id="G_b1484" fbc:name="G_b1484" fbc:label="G_b1484">
+      <fbc:geneProduct metaid="G_b3544" sboTerm="SBO:0000243" fbc:id="G_b3544" fbc:name="G_b3544" fbc:label="G_b3544">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146441,20 +153665,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1484">
+            <rdf:Description rdf:about="#G_b3544">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004949"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77268"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10248"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1483" sboTerm="SBO:0000243" fbc:id="G_b1483" fbc:name="G_b1483" fbc:label="G_b1483">
+      <fbc:geneProduct metaid="G_b3542" sboTerm="SBO:0000243" fbc:id="G_b3542" fbc:name="G_b3542" fbc:label="G_b3542">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146462,20 +153686,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1483">
+            <rdf:Description rdf:about="#G_b3542">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77622"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEG1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12626"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1290" sboTerm="SBO:0000243" fbc:id="G_b1290" fbc:name="G_b1290" fbc:label="G_b1290">
+      <fbc:geneProduct metaid="G_b1484" sboTerm="SBO:0000243" fbc:id="G_b1484" fbc:name="G_b1484" fbc:label="G_b1484">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146483,25 +153707,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1290">
+            <rdf:Description rdf:about="#G_b1484">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896881"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WA21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13787"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3541" sboTerm="SBO:0000243" fbc:id="G_b3541" fbc:name="G_b3541" fbc:label="G_b3541">
+      <fbc:geneProduct metaid="G_b1483" sboTerm="SBO:0000243" fbc:id="G_b1483" fbc:name="G_b1483" fbc:label="G_b1483">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146509,20 +153728,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3541">
+            <rdf:Description rdf:about="#G_b1483">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011566"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAG0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77622"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13786"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3543" sboTerm="SBO:0000243" fbc:id="G_b3543" fbc:name="G_b3543" fbc:label="G_b3543">
+      <fbc:geneProduct metaid="G_b3541" sboTerm="SBO:0000243" fbc:id="G_b3541" fbc:name="G_b3541" fbc:label="G_b3541">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146530,20 +153749,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3543">
+            <rdf:Description rdf:about="#G_b3541">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011572"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEF8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011566"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAG0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12627"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3540" sboTerm="SBO:0000243" fbc:id="G_b3540" fbc:name="G_b3540" fbc:label="G_b3540">
+      <fbc:geneProduct metaid="G_b1485" sboTerm="SBO:0000243" fbc:id="G_b1485" fbc:name="G_b1485" fbc:label="G_b1485">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146551,13 +153770,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3540">
+            <rdf:Description rdf:about="#G_b1485">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011564"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948056"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77463"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13788"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146585,7 +153804,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1487" sboTerm="SBO:0000243" fbc:id="G_b1487" fbc:name="G_b1487" fbc:label="G_b1487">
+      <fbc:geneProduct metaid="G_b1292" sboTerm="SBO:0000243" fbc:id="G_b1292" fbc:name="G_b1292" fbc:label="G_b1292">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146593,20 +153812,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1487">
+            <rdf:Description rdf:about="#G_b1292">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004958"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946052"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044761"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1293" sboTerm="SBO:0000243" fbc:id="G_b1293" fbc:name="G_b1293" fbc:label="G_b1293">
+      <fbc:geneProduct metaid="G_b3543" sboTerm="SBO:0000243" fbc:id="G_b3543" fbc:name="G_b3543" fbc:label="G_b3543">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146614,18 +153831,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1293">
+            <rdf:Description rdf:about="#G_b3543">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044762"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011572"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEF8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12625"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3542" sboTerm="SBO:0000243" fbc:id="G_b3542" fbc:name="G_b3542" fbc:label="G_b3542">
+      <fbc:geneProduct metaid="G_b3540" sboTerm="SBO:0000243" fbc:id="G_b3540" fbc:name="G_b3540" fbc:label="G_b3540">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146633,20 +153852,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3542">
+            <rdf:Description rdf:about="#G_b3540">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011570"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEG1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948064"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12628"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1294" sboTerm="SBO:0000243" fbc:id="G_b1294" fbc:name="G_b1294" fbc:label="G_b1294">
+      <fbc:geneProduct metaid="G_b1487" sboTerm="SBO:0000243" fbc:id="G_b1487" fbc:name="G_b1487" fbc:label="G_b1487">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146654,19 +153873,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1294">
+            <rdf:Description rdf:about="#G_b1487">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000914"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CG20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13790"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3544" sboTerm="SBO:0000243" fbc:id="G_b3544" fbc:name="G_b3544" fbc:label="G_b3544">
+      <fbc:geneProduct metaid="G_b1293" sboTerm="SBO:0000243" fbc:id="G_b1293" fbc:name="G_b1293" fbc:label="G_b1293">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146674,20 +153894,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3544">
+            <rdf:Description rdf:about="#G_b1293">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011576"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23847"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044762"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1292" sboTerm="SBO:0000243" fbc:id="G_b1292" fbc:name="G_b1292" fbc:label="G_b1292">
+      <fbc:geneProduct metaid="G_b1294" sboTerm="SBO:0000243" fbc:id="G_b1294" fbc:name="G_b1294" fbc:label="G_b1294">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146695,37 +153913,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1292">
+            <rdf:Description rdf:about="#G_b1294">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CG20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176840"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0381" sboTerm="SBO:0000243" fbc:id="G_b0381" fbc:name="G_b0381" fbc:label="G_b0381">
+      <fbc:geneProduct metaid="G_b0093" sboTerm="SBO:0000243" fbc:id="G_b0093" fbc:name="G_b0093" fbc:label="G_b0093">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0381">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001309"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10213"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0092" sboTerm="SBO:0000243" fbc:id="G_b0092" fbc:name="G_b0092" fbc:label="G_b0092">
         <notes>
@@ -146748,12 +153953,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0093" sboTerm="SBO:0000243" fbc:id="G_b0093" fbc:name="G_b0093" fbc:label="G_b0093">
+      <fbc:geneProduct metaid="G_b0381" sboTerm="SBO:0000243" fbc:id="G_b0381" fbc:name="G_b0381" fbc:label="G_b0381">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0381">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10213"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1325" sboTerm="SBO:0000243" fbc:id="G_b1325" fbc:name="G_b1325" fbc:label="G_b1325">
         <notes>
@@ -146866,6 +154085,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2290" sboTerm="SBO:0000243" fbc:id="G_b2290" fbc:name="G_b2290" fbc:label="G_b2290">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2290">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14101"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2379" sboTerm="SBO:0000243" fbc:id="G_b2379" fbc:name="G_b2379" fbc:label="G_b2379">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146887,7 +154127,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2290" sboTerm="SBO:0000243" fbc:id="G_b2290" fbc:name="G_b2290" fbc:label="G_b2290">
+      <fbc:geneProduct metaid="G_b3454" sboTerm="SBO:0000243" fbc:id="G_b3454" fbc:name="G_b3454" fbc:label="G_b3454">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146895,13 +154135,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2290">
+            <rdf:Description rdf:about="#G_b3454">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A959"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946772"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10536"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146929,6 +154169,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3456" sboTerm="SBO:0000243" fbc:id="G_b3456" fbc:name="G_b3456" fbc:label="G_b3456">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3456">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10541"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3455" sboTerm="SBO:0000243" fbc:id="G_b3455" fbc:name="G_b3455" fbc:label="G_b3455">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146950,27 +154211,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3456" sboTerm="SBO:0000243" fbc:id="G_b3456" fbc:name="G_b3456" fbc:label="G_b3456">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3456">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011287"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947966"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10541"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3457" sboTerm="SBO:0000243" fbc:id="G_b3457" fbc:name="G_b3457" fbc:label="G_b3457">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146992,27 +154232,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3454" sboTerm="SBO:0000243" fbc:id="G_b3454" fbc:name="G_b3454" fbc:label="G_b3454">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3454">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011282"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947961"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10536"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4208" sboTerm="SBO:0000243" fbc:id="G_b4208" fbc:name="G_b4208" fbc:label="G_b4208">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147278,7 +154497,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3588" sboTerm="SBO:0000243" fbc:id="G_b3588" fbc:name="G_b3588" fbc:label="G_b3588">
+      <fbc:geneProduct metaid="G_b3003" sboTerm="SBO:0000243" fbc:id="G_b3003" fbc:name="G_b3003" fbc:label="G_b3003">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147286,20 +154505,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3588">
+            <rdf:Description rdf:about="#G_b3003">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011718"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948104"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG84"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11292"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4269" sboTerm="SBO:0000243" fbc:id="G_b4269" fbc:name="G_b4269" fbc:label="G_b4269">
+      <fbc:geneProduct metaid="G_b0493" sboTerm="SBO:0000243" fbc:id="G_b0493" fbc:name="G_b0493" fbc:label="G_b0493">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147307,20 +154526,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4269">
+            <rdf:Description rdf:about="#G_b0493">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013982"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948802"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFP4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13262"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0493" sboTerm="SBO:0000243" fbc:id="G_b0493" fbc:name="G_b0493" fbc:label="G_b0493">
+      <fbc:geneProduct metaid="G_b4269" sboTerm="SBO:0000243" fbc:id="G_b4269" fbc:name="G_b4269" fbc:label="G_b4269">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147328,20 +154547,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0493">
+            <rdf:Description rdf:about="#G_b4269">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFP4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945337"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11436"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3003" sboTerm="SBO:0000243" fbc:id="G_b3003" fbc:name="G_b3003" fbc:label="G_b3003">
+      <fbc:geneProduct metaid="G_b3588" sboTerm="SBO:0000243" fbc:id="G_b3588" fbc:name="G_b3588" fbc:label="G_b3588">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147349,19 +154568,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3003">
+            <rdf:Description rdf:about="#G_b3588">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009859"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG84"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947478"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12292"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2317" sboTerm="SBO:0000243" fbc:id="G_b2317" fbc:name="G_b2317" fbc:label="G_b2317">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2690" sboTerm="SBO:0000243" fbc:id="G_b2690" fbc:name="G_b2690" fbc:label="G_b2690">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147383,13 +154609,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2317" sboTerm="SBO:0000243" fbc:id="G_b2317" fbc:name="G_b2317" fbc:label="G_b2317">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4084" sboTerm="SBO:0000243" fbc:id="G_b4084" fbc:name="G_b4084" fbc:label="G_b4084">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147516,7 +154735,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4088" sboTerm="SBO:0000243" fbc:id="G_b4088" fbc:name="G_b4088" fbc:label="G_b4088">
+      <fbc:geneProduct metaid="G_b4086" sboTerm="SBO:0000243" fbc:id="G_b4086" fbc:name="G_b4086" fbc:label="G_b4086">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147524,13 +154743,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4088">
+            <rdf:Description rdf:about="#G_b4086">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013398"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39265"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948604"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11958"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147558,7 +154777,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4086" sboTerm="SBO:0000243" fbc:id="G_b4086" fbc:name="G_b4086" fbc:label="G_b4086">
+      <fbc:geneProduct metaid="G_b4088" sboTerm="SBO:0000243" fbc:id="G_b4088" fbc:name="G_b4088" fbc:label="G_b4088">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147566,20 +154785,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4086">
+            <rdf:Description rdf:about="#G_b4088">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948594"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12458"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0712" sboTerm="SBO:0000243" fbc:id="G_b0712" fbc:name="G_b0712" fbc:label="G_b0712">
+      <fbc:geneProduct metaid="G_b0711" sboTerm="SBO:0000243" fbc:id="G_b0711" fbc:name="G_b0711" fbc:label="G_b0711">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147587,20 +154806,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0712">
+            <rdf:Description rdf:about="#G_b0711">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024946"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ8"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0711" sboTerm="SBO:0000243" fbc:id="G_b0711" fbc:name="G_b0711" fbc:label="G_b0711">
+      <fbc:geneProduct metaid="G_b0712" sboTerm="SBO:0000243" fbc:id="G_b0712" fbc:name="G_b0712" fbc:label="G_b0712">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147608,15 +154829,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0711">
+            <rdf:Description rdf:about="#G_b0712">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003778"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ7"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147846,6 +155065,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0219" sboTerm="SBO:0000243" fbc:id="G_b0219" fbc:name="G_b0219" fbc:label="G_b0219">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3833" sboTerm="SBO:0000243" fbc:id="G_b3833" fbc:name="G_b3833" fbc:label="G_b3833">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147944,7 +155170,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2523" sboTerm="SBO:0000243" fbc:id="G_b2523" fbc:name="G_b2523" fbc:label="G_b2523">
+      <fbc:geneProduct metaid="G_b2385" sboTerm="SBO:0000243" fbc:id="G_b2385" fbc:name="G_b2385" fbc:label="G_b2385">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4260" sboTerm="SBO:0000243" fbc:id="G_b4260" fbc:name="G_b4260" fbc:label="G_b4260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147952,13 +155185,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2523">
+            <rdf:Description rdf:about="#G_b4260">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008305"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948766"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P68767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBK6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176259"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148018,7 +155256,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4260" sboTerm="SBO:0000243" fbc:id="G_b4260" fbc:name="G_b4260" fbc:label="G_b4260">
+      <fbc:geneProduct metaid="G_b2523" sboTerm="SBO:0000243" fbc:id="G_b2523" fbc:name="G_b2523" fbc:label="G_b2523">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148026,31 +155264,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4260">
+            <rdf:Description rdf:about="#G_b2523">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013953"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P68767"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948791"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000819"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011356"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBK6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12310"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2385" sboTerm="SBO:0000243" fbc:id="G_b2385" fbc:name="G_b2385" fbc:label="G_b2385">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1640" sboTerm="SBO:0000243" fbc:id="G_b1640" fbc:name="G_b1640" fbc:label="G_b1640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148072,6 +155298,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1263" sboTerm="SBO:0000243" fbc:id="G_b1263" fbc:name="G_b1263" fbc:label="G_b1263">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1263">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945109"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11027"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0800" sboTerm="SBO:0000243" fbc:id="G_b0800" fbc:name="G_b0800" fbc:label="G_b0800">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148094,7 +155341,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1263" sboTerm="SBO:0000243" fbc:id="G_b1263" fbc:name="G_b1263" fbc:label="G_b1263">
+      <fbc:geneProduct metaid="G_b1264" sboTerm="SBO:0000243" fbc:id="G_b1264" fbc:name="G_b1264" fbc:label="G_b1264">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148102,20 +155349,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1263">
+            <rdf:Description rdf:about="#G_b1264">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004241"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945109"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11028"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1264" sboTerm="SBO:0000243" fbc:id="G_b1264" fbc:name="G_b1264" fbc:label="G_b1264">
+      <fbc:geneProduct metaid="G_b0049" sboTerm="SBO:0000243" fbc:id="G_b0049" fbc:name="G_b0049" fbc:label="G_b0049">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148123,13 +155370,32 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1264">
+            <rdf:Description rdf:about="#G_b0049">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00895"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945846"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P05637"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944770"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10048"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2734" sboTerm="SBO:0000243" fbc:id="G_b2734" fbc:name="G_b2734" fbc:label="G_b2734">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2734">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044113"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148157,7 +155423,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2734" sboTerm="SBO:0000243" fbc:id="G_b2734" fbc:name="G_b2734" fbc:label="G_b2734">
+      <fbc:geneProduct metaid="G_b4129" sboTerm="SBO:0000243" fbc:id="G_b4129" fbc:name="G_b4129" fbc:label="G_b4129">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148165,18 +155431,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2734">
+            <rdf:Description rdf:about="#G_b4129">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8N5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10553"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0049" sboTerm="SBO:0000243" fbc:id="G_b0049" fbc:name="G_b0049" fbc:label="G_b0049">
+      <fbc:geneProduct metaid="G_b2890" sboTerm="SBO:0000243" fbc:id="G_b2890" fbc:name="G_b2890" fbc:label="G_b2890">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2074" sboTerm="SBO:0000243" fbc:id="G_b2074" fbc:name="G_b2074" fbc:label="G_b2074">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148184,27 +155459,39 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0049">
+            <rdf:Description rdf:about="#G_b2074">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P05637"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944770"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2890" sboTerm="SBO:0000243" fbc:id="G_b2890" fbc:name="G_b2890" fbc:label="G_b2890">
+      <fbc:geneProduct metaid="G_b3193" sboTerm="SBO:0000243" fbc:id="G_b3193" fbc:name="G_b3193" fbc:label="G_b3193">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3193">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4129" sboTerm="SBO:0000243" fbc:id="G_b4129" fbc:name="G_b4129" fbc:label="G_b4129">
+      <fbc:geneProduct metaid="G_b2076" sboTerm="SBO:0000243" fbc:id="G_b2076" fbc:name="G_b2076" fbc:label="G_b2076">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148212,20 +155499,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4129">
+            <rdf:Description rdf:about="#G_b2076">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013520"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8N5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948645"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3059" sboTerm="SBO:0000243" fbc:id="G_b3059" fbc:name="G_b3059" fbc:label="G_b3059">
+      <fbc:geneProduct metaid="G_b3194" sboTerm="SBO:0000243" fbc:id="G_b3194" fbc:name="G_b3194" fbc:label="G_b3194">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148233,20 +155518,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3059">
+            <rdf:Description rdf:about="#G_b3194">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60782"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947561"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0968" sboTerm="SBO:0000243" fbc:id="G_b0968" fbc:name="G_b0968" fbc:label="G_b0968">
+      <fbc:geneProduct metaid="G_b3195" sboTerm="SBO:0000243" fbc:id="G_b3195" fbc:name="G_b3195" fbc:label="G_b3195">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148254,20 +155537,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0968">
+            <rdf:Description rdf:about="#G_b3195">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003276"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB65"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945304"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0414" sboTerm="SBO:0000243" fbc:id="G_b0414" fbc:name="G_b0414" fbc:label="G_b0414">
+      <fbc:geneProduct metaid="G_b3059" sboTerm="SBO:0000243" fbc:id="G_b3059" fbc:name="G_b3059" fbc:label="G_b3059">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148275,20 +155556,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0414">
+            <rdf:Description rdf:about="#G_b3059">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001441"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25539"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945620"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11674"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0492" sboTerm="SBO:0000243" fbc:id="G_b0492" fbc:name="G_b0492" fbc:label="G_b0492">
+      <fbc:geneProduct metaid="G_b0968" sboTerm="SBO:0000243" fbc:id="G_b0968" fbc:name="G_b0968" fbc:label="G_b0968">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148296,18 +155577,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0492">
+            <rdf:Description rdf:about="#G_b0968">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB65"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13726"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2673" sboTerm="SBO:0000243" fbc:id="G_b2673" fbc:name="G_b2673" fbc:label="G_b2673">
+      <fbc:geneProduct metaid="G_b0414" sboTerm="SBO:0000243" fbc:id="G_b0414" fbc:name="G_b0414" fbc:label="G_b0414">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148315,11 +155598,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2673">
+            <rdf:Description rdf:about="#G_b0414">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042977"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11321"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148435,27 +155720,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1901" sboTerm="SBO:0000243" fbc:id="G_b1901" fbc:name="G_b1901" fbc:label="G_b1901">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1901">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006330"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02924"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946409"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10057"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2547" sboTerm="SBO:0000243" fbc:id="G_b2547" fbc:name="G_b2547" fbc:label="G_b2547">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148491,7 +155755,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1900" sboTerm="SBO:0000243" fbc:id="G_b1900" fbc:name="G_b1900" fbc:label="G_b1900">
+      <fbc:geneProduct metaid="G_b4460" sboTerm="SBO:0000243" fbc:id="G_b4460" fbc:name="G_b4460" fbc:label="G_b4460">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148499,20 +155763,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1900">
+            <rdf:Description rdf:about="#G_b4460">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006328"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAF3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946408"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE26"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10059"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4460" sboTerm="SBO:0000243" fbc:id="G_b4460" fbc:name="G_b4460" fbc:label="G_b4460">
+      <fbc:geneProduct metaid="G_b1901" sboTerm="SBO:0000243" fbc:id="G_b1901" fbc:name="G_b1901" fbc:label="G_b1901">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148520,20 +155784,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4460">
+            <rdf:Description rdf:about="#G_b1901">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE26"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10057"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1769" sboTerm="SBO:0000243" fbc:id="G_b1769" fbc:name="G_b1769" fbc:label="G_b1769">
+      <fbc:geneProduct metaid="G_b1900" sboTerm="SBO:0000243" fbc:id="G_b1900" fbc:name="G_b1900" fbc:label="G_b1900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148541,16 +155805,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1769">
+            <rdf:Description rdf:about="#G_b1900">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003663"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020846"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11907"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P96710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAF3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10058"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148580,6 +155841,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1769" sboTerm="SBO:0000243" fbc:id="G_b1769" fbc:name="G_b1769" fbc:label="G_b1769">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1769">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11907"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P96710"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2841" sboTerm="SBO:0000243" fbc:id="G_b2841" fbc:name="G_b2841" fbc:label="G_b2841">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148662,7 +155947,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2938" sboTerm="SBO:0000243" fbc:id="G_b2938" fbc:name="G_b2938" fbc:label="G_b2938">
+      <fbc:geneProduct metaid="G_b4117" sboTerm="SBO:0000243" fbc:id="G_b4117" fbc:name="G_b4117" fbc:label="G_b4117">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148670,20 +155955,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2938">
+            <rdf:Description rdf:about="#G_b4117">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947432"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11501"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4117" sboTerm="SBO:0000243" fbc:id="G_b4117" fbc:name="G_b4117" fbc:label="G_b4117">
+      <fbc:geneProduct metaid="G_b2938" sboTerm="SBO:0000243" fbc:id="G_b2938" fbc:name="G_b2938" fbc:label="G_b2938">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148691,13 +155976,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4117">
+            <rdf:Description rdf:about="#G_b2938">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947432"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10959"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148770,7 +156055,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2307" sboTerm="SBO:0000243" fbc:id="G_b2307" fbc:name="G_b2307" fbc:label="G_b2307">
+      <fbc:geneProduct metaid="G_b0863" sboTerm="SBO:0000243" fbc:id="G_b0863" fbc:name="G_b0863" fbc:label="G_b0863">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148778,20 +156063,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2307">
+            <rdf:Description rdf:about="#G_b0863">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007613"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEU3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946790"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11625"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2306" sboTerm="SBO:0000243" fbc:id="G_b2306" fbc:name="G_b2306" fbc:label="G_b2306">
+      <fbc:geneProduct metaid="G_b0864" sboTerm="SBO:0000243" fbc:id="G_b0864" fbc:name="G_b0864" fbc:label="G_b0864">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148799,20 +156084,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2306">
+            <rdf:Description rdf:about="#G_b0864">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007610"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07109"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946789"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002939"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAF6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11624"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0864" sboTerm="SBO:0000243" fbc:id="G_b0864" fbc:name="G_b0864" fbc:label="G_b0864">
+      <fbc:geneProduct metaid="G_b2308" sboTerm="SBO:0000243" fbc:id="G_b2308" fbc:name="G_b2308" fbc:label="G_b2308">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148820,20 +156105,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0864">
+            <rdf:Description rdf:about="#G_b2308">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002939"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAF6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12125"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3268" sboTerm="SBO:0000243" fbc:id="G_b3268" fbc:name="G_b3268" fbc:label="G_b3268">
+      <fbc:geneProduct metaid="G_b0862" sboTerm="SBO:0000243" fbc:id="G_b0862" fbc:name="G_b0862" fbc:label="G_b0862">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148841,11 +156126,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3268">
+            <rdf:Description rdf:about="#G_b0862">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE34"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11626"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148871,7 +156158,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0861" sboTerm="SBO:0000243" fbc:id="G_b0861" fbc:name="G_b0861" fbc:label="G_b0861">
+      <fbc:geneProduct metaid="G_b3271" sboTerm="SBO:0000243" fbc:id="G_b3271" fbc:name="G_b3271" fbc:label="G_b3271">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148879,13 +156166,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0861">
+            <rdf:Description rdf:about="#G_b3271">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002931"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE30"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042512"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148913,7 +156198,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0860" sboTerm="SBO:0000243" fbc:id="G_b0860" fbc:name="G_b0860" fbc:label="G_b0860">
+      <fbc:geneProduct metaid="G_b2307" sboTerm="SBO:0000243" fbc:id="G_b2307" fbc:name="G_b2307" fbc:label="G_b2307">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148921,20 +156206,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0860">
+            <rdf:Description rdf:about="#G_b2307">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002927"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948981"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEU3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10007"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0862" sboTerm="SBO:0000243" fbc:id="G_b0862" fbc:name="G_b0862" fbc:label="G_b0862">
+      <fbc:geneProduct metaid="G_b3270" sboTerm="SBO:0000243" fbc:id="G_b3270" fbc:name="G_b3270" fbc:label="G_b3270">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148942,20 +156227,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0862">
+            <rdf:Description rdf:about="#G_b3270">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002933"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE34"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949046"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0863" sboTerm="SBO:0000243" fbc:id="G_b0863" fbc:name="G_b0863" fbc:label="G_b0863">
+      <fbc:geneProduct metaid="G_b0861" sboTerm="SBO:0000243" fbc:id="G_b0861" fbc:name="G_b0861" fbc:label="G_b0861">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148963,20 +156246,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0863">
+            <rdf:Description rdf:about="#G_b0861">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30859"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE30"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11627"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3270" sboTerm="SBO:0000243" fbc:id="G_b3270" fbc:name="G_b3270" fbc:label="G_b3270">
+      <fbc:geneProduct metaid="G_b0860" sboTerm="SBO:0000243" fbc:id="G_b0860" fbc:name="G_b0860" fbc:label="G_b0860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148984,18 +156267,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3270">
+            <rdf:Description rdf:about="#G_b0860">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11628"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3271" sboTerm="SBO:0000243" fbc:id="G_b3271" fbc:name="G_b3271" fbc:label="G_b3271">
+      <fbc:geneProduct metaid="G_b3268" sboTerm="SBO:0000243" fbc:id="G_b3268" fbc:name="G_b3268" fbc:label="G_b3268">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149003,18 +156288,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3271">
+            <rdf:Description rdf:about="#G_b3268">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042512"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2308" sboTerm="SBO:0000243" fbc:id="G_b2308" fbc:name="G_b2308" fbc:label="G_b2308">
+      <fbc:geneProduct metaid="G_b2306" sboTerm="SBO:0000243" fbc:id="G_b2306" fbc:name="G_b2306" fbc:label="G_b2306">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149022,13 +156307,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2308">
+            <rdf:Description rdf:about="#G_b2306">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947235"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07109"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10452"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149123,7 +156408,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4195" sboTerm="SBO:0000243" fbc:id="G_b4195" fbc:name="G_b4195" fbc:label="G_b4195">
+      <fbc:geneProduct metaid="G_b4194" sboTerm="SBO:0000243" fbc:id="G_b4194" fbc:name="G_b4194" fbc:label="G_b4194">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149131,26 +156416,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4195">
+            <rdf:Description rdf:about="#G_b4194">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013727"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69820"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013725"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948716"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12494"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4302" sboTerm="SBO:0000243" fbc:id="G_b4302" fbc:name="G_b4302" fbc:label="G_b4302">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4193" sboTerm="SBO:0000243" fbc:id="G_b4193" fbc:name="G_b4193" fbc:label="G_b4193">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149172,7 +156450,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4194" sboTerm="SBO:0000243" fbc:id="G_b4194" fbc:name="G_b4194" fbc:label="G_b4194">
+      <fbc:geneProduct metaid="G_b4195" sboTerm="SBO:0000243" fbc:id="G_b4195" fbc:name="G_b4195" fbc:label="G_b4195">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149180,19 +156458,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4194">
+            <rdf:Description rdf:about="#G_b4195">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013725"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948716"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013727"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12495"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4302" sboTerm="SBO:0000243" fbc:id="G_b4302" fbc:name="G_b4302" fbc:label="G_b4302">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0828" sboTerm="SBO:0000243" fbc:id="G_b0828" fbc:name="G_b0828" fbc:label="G_b0828">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149449,7 +156734,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0002" sboTerm="SBO:0000243" fbc:id="G_b0002" fbc:name="G_b0002" fbc:label="G_b0002">
+      <fbc:geneProduct metaid="G_b3940" sboTerm="SBO:0000243" fbc:id="G_b3940" fbc:name="G_b3940" fbc:label="G_b3940">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149457,20 +156742,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0002">
+            <rdf:Description rdf:about="#G_b3940">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000008"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00561"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945803"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10590"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3940" sboTerm="SBO:0000243" fbc:id="G_b3940" fbc:name="G_b3940" fbc:label="G_b3940">
+      <fbc:geneProduct metaid="G_b0002" sboTerm="SBO:0000243" fbc:id="G_b0002" fbc:name="G_b0002" fbc:label="G_b0002">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149478,13 +156763,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3940">
+            <rdf:Description rdf:about="#G_b0002">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012889"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00562"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000008"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10998"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149512,6 +156797,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2840" sboTerm="SBO:0000243" fbc:id="G_b2840" fbc:name="G_b2840" fbc:label="G_b2840">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2840">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001920"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015942"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185C8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185C8"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4139" sboTerm="SBO:0000243" fbc:id="G_b4139" fbc:name="G_b4139" fbc:label="G_b4139">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149587,7 +156895,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0655" sboTerm="SBO:0000243" fbc:id="G_b0655" fbc:name="G_b0655" fbc:label="G_b0655">
+      <fbc:geneProduct metaid="G_b0654" sboTerm="SBO:0000243" fbc:id="G_b0654" fbc:name="G_b0654" fbc:label="G_b0654">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149595,20 +156903,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0655">
+            <rdf:Description rdf:about="#G_b0654">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002241"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946938"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AER3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945443"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12661"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0652" sboTerm="SBO:0000243" fbc:id="G_b0652" fbc:name="G_b0652" fbc:label="G_b0652">
+      <fbc:geneProduct metaid="G_b0653" sboTerm="SBO:0000243" fbc:id="G_b0653" fbc:name="G_b0653" fbc:label="G_b0653">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149616,20 +156924,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0652">
+            <rdf:Description rdf:about="#G_b0653">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002232"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAG3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945254"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AER5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12662"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0654" sboTerm="SBO:0000243" fbc:id="G_b0654" fbc:name="G_b0654" fbc:label="G_b0654">
+      <fbc:geneProduct metaid="G_b0655" sboTerm="SBO:0000243" fbc:id="G_b0655" fbc:name="G_b0655" fbc:label="G_b0655">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149637,20 +156945,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0654">
+            <rdf:Description rdf:about="#G_b0655">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002239"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AER3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945443"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12700"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0653" sboTerm="SBO:0000243" fbc:id="G_b0653" fbc:name="G_b0653" fbc:label="G_b0653">
+      <fbc:geneProduct metaid="G_b0652" sboTerm="SBO:0000243" fbc:id="G_b0652" fbc:name="G_b0652" fbc:label="G_b0652">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149658,13 +156966,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0653">
+            <rdf:Description rdf:about="#G_b0652">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002234"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AER5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947354"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAG3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12663"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149776,7 +157084,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3503" sboTerm="SBO:0000243" fbc:id="G_b3503" fbc:name="G_b3503" fbc:label="G_b3503">
+      <fbc:geneProduct metaid="G_b2495" sboTerm="SBO:0000243" fbc:id="G_b2495" fbc:name="G_b2495" fbc:label="G_b2495">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149784,20 +157092,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3503">
+            <rdf:Description rdf:about="#G_b2495">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB96"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCJ8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175891"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2495" sboTerm="SBO:0000243" fbc:id="G_b2495" fbc:name="G_b2495" fbc:label="G_b2495">
+      <fbc:geneProduct metaid="G_b1064" sboTerm="SBO:0000243" fbc:id="G_b1064" fbc:name="G_b1064" fbc:label="G_b1064">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149805,22 +157115,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2495">
+            <rdf:Description rdf:about="#G_b1064">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006659"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCJ8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC59"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12688"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1064" sboTerm="SBO:0000243" fbc:id="G_b1064" fbc:name="G_b1064" fbc:label="G_b1064">
+      <fbc:geneProduct metaid="G_b3503" sboTerm="SBO:0000243" fbc:id="G_b3503" fbc:name="G_b3503" fbc:label="G_b3503">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149828,13 +157136,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1064">
+            <rdf:Description rdf:about="#G_b3503">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC59"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB96"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12237"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149904,7 +157212,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3731" sboTerm="SBO:0000243" fbc:id="G_b3731" fbc:name="G_b3731" fbc:label="G_b3731">
+      <fbc:geneProduct metaid="G_b3734" sboTerm="SBO:0000243" fbc:id="G_b3734" fbc:name="G_b3734" fbc:label="G_b3734">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149912,13 +157220,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3731">
+            <rdf:Description rdf:about="#G_b3734">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012206"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6E6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948245"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABB0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176951"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149946,7 +157260,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3734" sboTerm="SBO:0000243" fbc:id="G_b3734" fbc:name="G_b3734" fbc:label="G_b3734">
+      <fbc:geneProduct metaid="G_b3732" sboTerm="SBO:0000243" fbc:id="G_b3732" fbc:name="G_b3732" fbc:label="G_b3732">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149954,19 +157268,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3734">
+            <rdf:Description rdf:about="#G_b3732">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABB0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948242"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABB4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10101"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000194"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004100"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFM8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176949"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149994,7 +157309,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3736" sboTerm="SBO:0000243" fbc:id="G_b3736" fbc:name="G_b3736" fbc:label="G_b3736">
+      <fbc:geneProduct metaid="G_b3731" sboTerm="SBO:0000243" fbc:id="G_b3731" fbc:name="G_b3731" fbc:label="G_b3731">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150002,13 +157317,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3736">
+            <rdf:Description rdf:about="#G_b3731">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948247"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6E6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10100"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150036,6 +157351,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3733" sboTerm="SBO:0000243" fbc:id="G_b3733" fbc:name="G_b3733" fbc:label="G_b3733">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3733">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012211"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176950"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3737" sboTerm="SBO:0000243" fbc:id="G_b3737" fbc:name="G_b3737" fbc:label="G_b3737">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150062,35 +157401,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3732" sboTerm="SBO:0000243" fbc:id="G_b3732" fbc:name="G_b3732" fbc:label="G_b3732">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3732">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABB4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004100"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFM8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176949"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3733" sboTerm="SBO:0000243" fbc:id="G_b3733" fbc:name="G_b3733" fbc:label="G_b3733">
+      <fbc:geneProduct metaid="G_b3736" sboTerm="SBO:0000243" fbc:id="G_b3736" fbc:name="G_b3736" fbc:label="G_b3736">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150098,16 +157409,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3733">
+            <rdf:Description rdf:about="#G_b3736">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948243"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10104"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10103"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150240,7 +157548,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0934" sboTerm="SBO:0000243" fbc:id="G_b0934" fbc:name="G_b0934" fbc:label="G_b0934">
+      <fbc:geneProduct metaid="G_b0936" sboTerm="SBO:0000243" fbc:id="G_b0936" fbc:name="G_b0936" fbc:label="G_b0936">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150248,20 +157556,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0934">
+            <rdf:Description rdf:about="#G_b0936">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003175"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947216"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13707"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0366" sboTerm="SBO:0000243" fbc:id="G_b0366" fbc:name="G_b0366" fbc:label="G_b0366">
+      <fbc:geneProduct metaid="G_b0365" sboTerm="SBO:0000243" fbc:id="G_b0365" fbc:name="G_b0365" fbc:label="G_b0365">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150269,20 +157577,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0366">
+            <rdf:Description rdf:about="#G_b0365">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13300"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0936" sboTerm="SBO:0000243" fbc:id="G_b0936" fbc:name="G_b0936" fbc:label="G_b0936">
+      <fbc:geneProduct metaid="G_b0934" sboTerm="SBO:0000243" fbc:id="G_b0934" fbc:name="G_b0934" fbc:label="G_b0934">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150290,20 +157598,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0936">
+            <rdf:Description rdf:about="#G_b0934">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75853"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947216"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13705"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0367" sboTerm="SBO:0000243" fbc:id="G_b0367" fbc:name="G_b0367" fbc:label="G_b0367">
+      <fbc:geneProduct metaid="G_b0933" sboTerm="SBO:0000243" fbc:id="G_b0933" fbc:name="G_b0933" fbc:label="G_b0933">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150311,20 +157619,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0367">
+            <rdf:Description rdf:about="#G_b0933">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47539"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAI1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12358"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0365" sboTerm="SBO:0000243" fbc:id="G_b0365" fbc:name="G_b0365" fbc:label="G_b0365">
+      <fbc:geneProduct metaid="G_b0367" sboTerm="SBO:0000243" fbc:id="G_b0367" fbc:name="G_b0367" fbc:label="G_b0367">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150332,20 +157640,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0365">
+            <rdf:Description rdf:about="#G_b0367">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13301"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0933" sboTerm="SBO:0000243" fbc:id="G_b0933" fbc:name="G_b0933" fbc:label="G_b0933">
+      <fbc:geneProduct metaid="G_b0366" sboTerm="SBO:0000243" fbc:id="G_b0366" fbc:name="G_b0366" fbc:label="G_b0366">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150353,13 +157661,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0933">
+            <rdf:Description rdf:about="#G_b0366">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003173"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAI1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13299"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150471,6 +157779,20 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0323" sboTerm="SBO:0000243" fbc:id="G_b0323" fbc:name="G_b0323" fbc:label="G_b0323">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2874" sboTerm="SBO:0000243" fbc:id="G_b2874" fbc:name="G_b2874" fbc:label="G_b2874">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0521" sboTerm="SBO:0000243" fbc:id="G_b0521" fbc:name="G_b0521" fbc:label="G_b0521">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150492,20 +157814,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0323" sboTerm="SBO:0000243" fbc:id="G_b0323" fbc:name="G_b0323" fbc:label="G_b0323">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2874" sboTerm="SBO:0000243" fbc:id="G_b2874" fbc:name="G_b2874" fbc:label="G_b2874">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0033" sboTerm="SBO:0000243" fbc:id="G_b0033" fbc:name="G_b0033" fbc:label="G_b0033">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150683,26 +157991,73 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2220" sboTerm="SBO:0000243" fbc:id="G_b2220" fbc:name="G_b2220" fbc:label="G_b2220">
+      <fbc:geneProduct metaid="G_b2079" sboTerm="SBO:0000243" fbc:id="G_b2079" fbc:name="G_b2079" fbc:label="G_b2079">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0833" sboTerm="SBO:0000243" fbc:id="G_b0833" fbc:name="G_b0833" fbc:label="G_b0833">
+      <fbc:geneProduct metaid="G_b3525" sboTerm="SBO:0000243" fbc:id="G_b3525" fbc:name="G_b3525" fbc:label="G_b3525">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3525">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12252"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2079" sboTerm="SBO:0000243" fbc:id="G_b2079" fbc:name="G_b2079" fbc:label="G_b2079">
+      <fbc:geneProduct metaid="G_b4061" sboTerm="SBO:0000243" fbc:id="G_b4061" fbc:name="G_b4061" fbc:label="G_b4061">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4061">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2503" sboTerm="SBO:0000243" fbc:id="G_b2503" fbc:name="G_b2503" fbc:label="G_b2503">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2503">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946968"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14202"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3529" sboTerm="SBO:0000243" fbc:id="G_b3529" fbc:name="G_b3529" fbc:label="G_b3529">
         <notes>
@@ -150726,6 +158081,74 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0457" sboTerm="SBO:0000243" fbc:id="G_b0457" fbc:name="G_b0457" fbc:label="G_b0457">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0457">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045464"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1285" sboTerm="SBO:0000243" fbc:id="G_b1285" fbc:name="G_b1285" fbc:label="G_b1285">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1285">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13415"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0833" sboTerm="SBO:0000243" fbc:id="G_b0833" fbc:name="G_b0833" fbc:label="G_b0833">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1489" sboTerm="SBO:0000243" fbc:id="G_b1489" fbc:name="G_b1489" fbc:label="G_b1489">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1489">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13792"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0315" sboTerm="SBO:0000243" fbc:id="G_b0315" fbc:name="G_b0315" fbc:label="G_b0315">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150747,85 +158170,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1285" sboTerm="SBO:0000243" fbc:id="G_b1285" fbc:name="G_b1285" fbc:label="G_b1285">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1285">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77334"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13415"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4061" sboTerm="SBO:0000243" fbc:id="G_b4061" fbc:name="G_b4061" fbc:label="G_b4061">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4061">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0457" sboTerm="SBO:0000243" fbc:id="G_b0457" fbc:name="G_b0457" fbc:label="G_b0457">
+      <fbc:geneProduct metaid="G_b2220" sboTerm="SBO:0000243" fbc:id="G_b2220" fbc:name="G_b2220" fbc:label="G_b2220">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0457">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045464"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045464"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3525" sboTerm="SBO:0000243" fbc:id="G_b3525" fbc:name="G_b3525" fbc:label="G_b3525">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3525">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37646"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12252"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2554" sboTerm="SBO:0000243" fbc:id="G_b2554" fbc:name="G_b2554" fbc:label="G_b2554">
         <notes>
@@ -150834,48 +158184,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2503" sboTerm="SBO:0000243" fbc:id="G_b2503" fbc:name="G_b2503" fbc:label="G_b2503">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2503">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77172"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946968"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14202"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1489" sboTerm="SBO:0000243" fbc:id="G_b1489" fbc:name="G_b1489" fbc:label="G_b1489">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1489">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13792"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1208" sboTerm="SBO:0000243" fbc:id="G_b1208" fbc:name="G_b1208" fbc:label="G_b1208">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150937,7 +158245,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1738" sboTerm="SBO:0000243" fbc:id="G_b1738" fbc:name="G_b1738" fbc:label="G_b1738">
+      <fbc:geneProduct metaid="G_b1737" sboTerm="SBO:0000243" fbc:id="G_b1737" fbc:name="G_b1737" fbc:label="G_b1737">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150945,13 +158253,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1738">
+            <rdf:Description rdf:about="#G_b1737">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005797"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10141"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150979,7 +158287,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1737" sboTerm="SBO:0000243" fbc:id="G_b1737" fbc:name="G_b1737" fbc:label="G_b1737">
+      <fbc:geneProduct metaid="G_b1738" sboTerm="SBO:0000243" fbc:id="G_b1738" fbc:name="G_b1738" fbc:label="G_b1738">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150987,20 +158295,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1737">
+            <rdf:Description rdf:about="#G_b1738">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17334"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945982"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10141"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10140"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3532" sboTerm="SBO:0000243" fbc:id="G_b3532" fbc:name="G_b3532" fbc:label="G_b3532">
+      <fbc:geneProduct metaid="G_b3533" sboTerm="SBO:0000243" fbc:id="G_b3533" fbc:name="G_b3533" fbc:label="G_b3533">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151008,18 +158316,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3532">
+            <rdf:Description rdf:about="#G_b3533">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046025"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3533" sboTerm="SBO:0000243" fbc:id="G_b3533" fbc:name="G_b3533" fbc:label="G_b3533">
+      <fbc:geneProduct metaid="G_b3530" sboTerm="SBO:0000243" fbc:id="G_b3530" fbc:name="G_b3530" fbc:label="G_b3530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151027,18 +158335,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3533">
+            <rdf:Description rdf:about="#G_b3530">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046028"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3530" sboTerm="SBO:0000243" fbc:id="G_b3530" fbc:name="G_b3530" fbc:label="G_b3530">
+      <fbc:geneProduct metaid="G_b3532" sboTerm="SBO:0000243" fbc:id="G_b3532" fbc:name="G_b3532" fbc:label="G_b3532">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151046,11 +158354,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3530">
+            <rdf:Description rdf:about="#G_b3532">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046026"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151109,7 +158417,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2128" sboTerm="SBO:0000243" fbc:id="G_b2128" fbc:name="G_b2128" fbc:label="G_b2128">
+      <fbc:geneProduct metaid="G_b2131" sboTerm="SBO:0000243" fbc:id="G_b2131" fbc:name="G_b2131" fbc:label="G_b2131">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151117,20 +158425,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2128">
+            <rdf:Description rdf:about="#G_b2131">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12012"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2129" sboTerm="SBO:0000243" fbc:id="G_b2129" fbc:name="G_b2129" fbc:label="G_b2129">
+      <fbc:geneProduct metaid="G_b2130" sboTerm="SBO:0000243" fbc:id="G_b2130" fbc:name="G_b2130" fbc:label="G_b2130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151138,20 +158446,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2129">
+            <rdf:Description rdf:about="#G_b2130">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33360"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946659"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12011"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2131" sboTerm="SBO:0000243" fbc:id="G_b2131" fbc:name="G_b2131" fbc:label="G_b2131">
+      <fbc:geneProduct metaid="G_b2129" sboTerm="SBO:0000243" fbc:id="G_b2129" fbc:name="G_b2129" fbc:label="G_b2129">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151159,20 +158467,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2131">
+            <rdf:Description rdf:about="#G_b2129">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946681"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33360"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12010"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2130" sboTerm="SBO:0000243" fbc:id="G_b2130" fbc:name="G_b2130" fbc:label="G_b2130">
+      <fbc:geneProduct metaid="G_b2128" sboTerm="SBO:0000243" fbc:id="G_b2128" fbc:name="G_b2128" fbc:label="G_b2128">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151180,13 +158488,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2130">
+            <rdf:Description rdf:about="#G_b2128">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33361"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12009"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151317,7 +158625,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2599" sboTerm="SBO:0000243" fbc:id="G_b2599" fbc:name="G_b2599" fbc:label="G_b2599">
+      <fbc:geneProduct metaid="G_b2600" sboTerm="SBO:0000243" fbc:id="G_b2600" fbc:name="G_b2600" fbc:label="G_b2600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151325,20 +158633,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2599">
+            <rdf:Description rdf:about="#G_b2600">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9J8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11039"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2600" sboTerm="SBO:0000243" fbc:id="G_b2600" fbc:name="G_b2600" fbc:label="G_b2600">
+      <fbc:geneProduct metaid="G_b2599" sboTerm="SBO:0000243" fbc:id="G_b2599" fbc:name="G_b2599" fbc:label="G_b2599">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151346,13 +158654,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2600">
+            <rdf:Description rdf:about="#G_b2599">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9J8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10707"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151401,27 +158709,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2539" sboTerm="SBO:0000243" fbc:id="G_b2539" fbc:name="G_b2539" fbc:label="G_b2539">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2539">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008357"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47140"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13457"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2542" sboTerm="SBO:0000243" fbc:id="G_b2542" fbc:name="G_b2542" fbc:label="G_b2542">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151485,28 +158772,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0616" sboTerm="SBO:0000243" fbc:id="G_b0616" fbc:name="G_b0616" fbc:label="G_b0616">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0616">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002122"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9I1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945406"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13542"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0615" sboTerm="SBO:0000243" fbc:id="G_b0615" fbc:name="G_b0615" fbc:label="G_b0615">
+      <fbc:geneProduct metaid="G_b2539" sboTerm="SBO:0000243" fbc:id="G_b2539" fbc:name="G_b2539" fbc:label="G_b2539">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151514,13 +158780,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0615">
+            <rdf:Description rdf:about="#G_b2539">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75726"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13457"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151569,7 +158835,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0612" sboTerm="SBO:0000243" fbc:id="G_b0612" fbc:name="G_b0612" fbc:label="G_b0612">
+      <fbc:geneProduct metaid="G_b0616" sboTerm="SBO:0000243" fbc:id="G_b0616" fbc:name="G_b0616" fbc:label="G_b0616">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151577,20 +158843,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0612">
+            <rdf:Description rdf:about="#G_b0616">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949070"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9I1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13542"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0789" sboTerm="SBO:0000243" fbc:id="G_b0789" fbc:name="G_b0789" fbc:label="G_b0789">
+      <fbc:geneProduct metaid="G_b0615" sboTerm="SBO:0000243" fbc:id="G_b0615" fbc:name="G_b0615" fbc:label="G_b0615">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151598,25 +158864,39 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0789">
+            <rdf:Description rdf:about="#G_b0615">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA84"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945409"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13541"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1046" sboTerm="SBO:0000243" fbc:id="G_b1046" fbc:name="G_b1046" fbc:label="G_b1046">
+      <fbc:geneProduct metaid="G_b0612" sboTerm="SBO:0000243" fbc:id="G_b0612" fbc:name="G_b0612" fbc:label="G_b0612">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0612">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE74"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13538"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1249" sboTerm="SBO:0000243" fbc:id="G_b1249" fbc:name="G_b1249" fbc:label="G_b1249">
         <notes>
@@ -151639,14 +158919,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2389" sboTerm="SBO:0000243" fbc:id="G_b2389" fbc:name="G_b2389" fbc:label="G_b2389">
+      <fbc:geneProduct metaid="G_b1046" sboTerm="SBO:0000243" fbc:id="G_b1046" fbc:name="G_b1046" fbc:label="G_b1046">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1592" sboTerm="SBO:0000243" fbc:id="G_b1592" fbc:name="G_b1592" fbc:label="G_b1592">
+      <fbc:geneProduct metaid="G_b0789" sboTerm="SBO:0000243" fbc:id="G_b0789" fbc:name="G_b0789" fbc:label="G_b0789">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151654,13 +158934,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1592">
+            <rdf:Description rdf:about="#G_b0789">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76175"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947179"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA84"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13671"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151688,7 +158968,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2074" sboTerm="SBO:0000243" fbc:id="G_b2074" fbc:name="G_b2074" fbc:label="G_b2074">
+      <fbc:geneProduct metaid="G_b1592" sboTerm="SBO:0000243" fbc:id="G_b1592" fbc:name="G_b1592" fbc:label="G_b1592">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151696,60 +158976,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2074">
+            <rdf:Description rdf:about="#G_b1592">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13848"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3195" sboTerm="SBO:0000243" fbc:id="G_b3195" fbc:name="G_b3195" fbc:label="G_b3195">
+      <fbc:geneProduct metaid="G_b2389" sboTerm="SBO:0000243" fbc:id="G_b2389" fbc:name="G_b2389" fbc:label="G_b2389">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3195">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3035" sboTerm="SBO:0000243" fbc:id="G_b3035" fbc:name="G_b3035" fbc:label="G_b3035">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3035">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009965"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02930"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947521"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11009"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0462" sboTerm="SBO:0000243" fbc:id="G_b0462" fbc:name="G_b0462" fbc:label="G_b0462">
+      <fbc:geneProduct metaid="G_b0792" sboTerm="SBO:0000243" fbc:id="G_b0792" fbc:name="G_b0792" fbc:label="G_b0792">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151757,20 +159004,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0462">
+            <rdf:Description rdf:about="#G_b0792">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001601"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31224"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945108"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046096"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3194" sboTerm="SBO:0000243" fbc:id="G_b3194" fbc:name="G_b3194" fbc:label="G_b3194">
+      <fbc:geneProduct metaid="G_b0463" sboTerm="SBO:0000243" fbc:id="G_b0463" fbc:name="G_b0463" fbc:label="G_b0463">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151778,18 +159023,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3194">
+            <rdf:Description rdf:about="#G_b0463">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE06"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11703"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2076" sboTerm="SBO:0000243" fbc:id="G_b2076" fbc:name="G_b2076" fbc:label="G_b2076">
+      <fbc:geneProduct metaid="G_b3035" sboTerm="SBO:0000243" fbc:id="G_b3035" fbc:name="G_b3035" fbc:label="G_b3035">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151797,11 +159044,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2076">
+            <rdf:Description rdf:about="#G_b3035">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11009"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151829,28 +159078,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0463" sboTerm="SBO:0000243" fbc:id="G_b0463" fbc:name="G_b0463" fbc:label="G_b0463">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0463">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE06"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945112"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11703"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3193" sboTerm="SBO:0000243" fbc:id="G_b3193" fbc:name="G_b3193" fbc:label="G_b3193">
+      <fbc:geneProduct metaid="G_b0462" sboTerm="SBO:0000243" fbc:id="G_b0462" fbc:name="G_b0462" fbc:label="G_b0462">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151858,11 +159086,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3193">
+            <rdf:Description rdf:about="#G_b0462">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11704"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151992,7 +159222,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2955" sboTerm="SBO:0000243" fbc:id="G_b2955" fbc:name="G_b2955" fbc:label="G_b2955">
+      <fbc:geneProduct metaid="G_b3867" sboTerm="SBO:0000243" fbc:id="G_b3867" fbc:name="G_b3867" fbc:label="G_b3867">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152000,22 +159230,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2955">
+            <rdf:Description rdf:about="#G_b3867">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WI95"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11836"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3867" sboTerm="SBO:0000243" fbc:id="G_b3867" fbc:name="G_b3867" fbc:label="G_b3867">
+      <fbc:geneProduct metaid="G_b2955" sboTerm="SBO:0000243" fbc:id="G_b2955" fbc:name="G_b2955" fbc:label="G_b2955">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152023,13 +159251,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3867">
+            <rdf:Description rdf:about="#G_b2955">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WI95"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173782"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152078,7 +159308,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2678" sboTerm="SBO:0000243" fbc:id="G_b2678" fbc:name="G_b2678" fbc:label="G_b2678">
+      <fbc:geneProduct metaid="G_b2679" sboTerm="SBO:0000243" fbc:id="G_b2679" fbc:name="G_b2679" fbc:label="G_b2679">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152086,20 +159316,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2678">
+            <rdf:Description rdf:about="#G_b2679">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008816"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947145"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFM2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10773"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2677" sboTerm="SBO:0000243" fbc:id="G_b2677" fbc:name="G_b2677" fbc:label="G_b2677">
+      <fbc:geneProduct metaid="G_b2678" sboTerm="SBO:0000243" fbc:id="G_b2678" fbc:name="G_b2678" fbc:label="G_b2678">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152107,20 +159337,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2677">
+            <rdf:Description rdf:about="#G_b2678">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14175"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10772"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2679" sboTerm="SBO:0000243" fbc:id="G_b2679" fbc:name="G_b2679" fbc:label="G_b2679">
+      <fbc:geneProduct metaid="G_b2677" sboTerm="SBO:0000243" fbc:id="G_b2677" fbc:name="G_b2677" fbc:label="G_b2677">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152128,13 +159358,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2679">
+            <rdf:Description rdf:about="#G_b2677">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008818"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFM2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10771"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152204,7 +159434,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0324" sboTerm="SBO:0000243" fbc:id="G_b0324" fbc:name="G_b0324" fbc:label="G_b0324">
+      <fbc:geneProduct metaid="G_b0337" sboTerm="SBO:0000243" fbc:id="G_b0337" fbc:name="G_b0337" fbc:label="G_b0337">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152212,18 +159442,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0324">
+            <rdf:Description rdf:about="#G_b0337">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11326"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0337" sboTerm="SBO:0000243" fbc:id="G_b0337" fbc:name="G_b0337" fbc:label="G_b0337">
+      <fbc:geneProduct metaid="G_b2559" sboTerm="SBO:0000243" fbc:id="G_b2559" fbc:name="G_b2559" fbc:label="G_b2559">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152231,20 +159463,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0337">
+            <rdf:Description rdf:about="#G_b2559">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001161"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P21335"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2559" sboTerm="SBO:0000243" fbc:id="G_b2559" fbc:name="G_b2559" fbc:label="G_b2559">
+      <fbc:geneProduct metaid="G_b0324" sboTerm="SBO:0000243" fbc:id="G_b0324" fbc:name="G_b0324" fbc:label="G_b0324">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152252,15 +159486,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2559">
+            <rdf:Description rdf:about="#G_b0324">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016192"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016193"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P21335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046836"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152404,7 +159634,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1055" sboTerm="SBO:0000243" fbc:id="G_b1055" fbc:name="G_b1055" fbc:label="G_b1055">
+      <fbc:geneProduct metaid="G_b3611" sboTerm="SBO:0000243" fbc:id="G_b3611" fbc:name="G_b3611" fbc:label="G_b3611">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152412,19 +159642,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1055">
+            <rdf:Description rdf:about="#G_b3611">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WKH8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044112"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3425" sboTerm="SBO:0000243" fbc:id="G_b3425" fbc:name="G_b3425" fbc:label="G_b3425">
+      <fbc:geneProduct metaid="G_b2668" sboTerm="SBO:0000243" fbc:id="G_b2668" fbc:name="G_b2668" fbc:label="G_b2668">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152432,20 +159661,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3425">
+            <rdf:Description rdf:about="#G_b2668">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011182"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6V5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947935"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P55734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13288"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2521" sboTerm="SBO:0000243" fbc:id="G_b2521" fbc:name="G_b2521" fbc:label="G_b2521">
+      <fbc:geneProduct metaid="G_b1055" sboTerm="SBO:0000243" fbc:id="G_b1055" fbc:name="G_b1055" fbc:label="G_b1055">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152453,20 +159682,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2521">
+            <rdf:Description rdf:about="#G_b1055">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008299"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WKH8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172969"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3611" sboTerm="SBO:0000243" fbc:id="G_b3611" fbc:name="G_b3611" fbc:label="G_b3611">
+      <fbc:geneProduct metaid="G_b2521" sboTerm="SBO:0000243" fbc:id="G_b2521" fbc:name="G_b2521" fbc:label="G_b2521">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152474,18 +159702,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3611">
+            <rdf:Description rdf:about="#G_b2521">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044112"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11600"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2668" sboTerm="SBO:0000243" fbc:id="G_b2668" fbc:name="G_b2668" fbc:label="G_b2668">
+      <fbc:geneProduct metaid="G_b3425" sboTerm="SBO:0000243" fbc:id="G_b3425" fbc:name="G_b3425" fbc:label="G_b3425">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152493,13 +159723,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2668">
+            <rdf:Description rdf:about="#G_b3425">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P55734"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6V5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10395"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152658,7 +159888,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2414" sboTerm="SBO:0000243" fbc:id="G_b2414" fbc:name="G_b2414" fbc:label="G_b2414">
+      <fbc:geneProduct metaid="G_b2421" sboTerm="SBO:0000243" fbc:id="G_b2421" fbc:name="G_b2421" fbc:label="G_b2421">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152666,20 +159896,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2414">
+            <rdf:Description rdf:about="#G_b2421">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007957"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10193"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2421" sboTerm="SBO:0000243" fbc:id="G_b2421" fbc:name="G_b2421" fbc:label="G_b2421">
+      <fbc:geneProduct metaid="G_b2414" sboTerm="SBO:0000243" fbc:id="G_b2414" fbc:name="G_b2414" fbc:label="G_b2414">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152687,13 +159917,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2421">
+            <rdf:Description rdf:about="#G_b2414">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007982"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16703"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10192"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152721,7 +159951,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0886" sboTerm="SBO:0000243" fbc:id="G_b0886" fbc:name="G_b0886" fbc:label="G_b0886">
+      <fbc:geneProduct metaid="G_b0887" sboTerm="SBO:0000243" fbc:id="G_b0887" fbc:name="G_b0887" fbc:label="G_b0887">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152729,20 +159959,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0886">
+            <rdf:Description rdf:about="#G_b0887">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945504"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P29018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11405"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0887" sboTerm="SBO:0000243" fbc:id="G_b0887" fbc:name="G_b0887" fbc:label="G_b0887">
+      <fbc:geneProduct metaid="G_b0886" sboTerm="SBO:0000243" fbc:id="G_b0886" fbc:name="G_b0886" fbc:label="G_b0886">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152750,20 +159980,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0887">
+            <rdf:Description rdf:about="#G_b0886">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P29018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949052"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10012"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1918" sboTerm="SBO:0000243" fbc:id="G_b1918" fbc:name="G_b1918" fbc:label="G_b1918">
+      <fbc:geneProduct metaid="G_b1920" sboTerm="SBO:0000243" fbc:id="G_b1920" fbc:name="G_b1920" fbc:label="G_b1920">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152771,13 +160001,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1918">
+            <rdf:Description rdf:about="#G_b1920">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006386"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFT2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949105"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEM9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12680"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152805,7 +160035,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1920" sboTerm="SBO:0000243" fbc:id="G_b1920" fbc:name="G_b1920" fbc:label="G_b1920">
+      <fbc:geneProduct metaid="G_b1918" sboTerm="SBO:0000243" fbc:id="G_b1918" fbc:name="G_b1918" fbc:label="G_b1918">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152813,13 +160043,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1920">
+            <rdf:Description rdf:about="#G_b1918">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEM9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFT2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949105"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14037"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152896,27 +160126,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0734" sboTerm="SBO:0000243" fbc:id="G_b0734" fbc:name="G_b0734" fbc:label="G_b0734">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0734">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10174"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4515" sboTerm="SBO:0000243" fbc:id="G_b4515" fbc:name="G_b4515" fbc:label="G_b4515">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -152938,7 +160147,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0432" sboTerm="SBO:0000243" fbc:id="G_b0432" fbc:name="G_b0432" fbc:label="G_b0432">
+      <fbc:geneProduct metaid="G_b0734" sboTerm="SBO:0000243" fbc:id="G_b0734" fbc:name="G_b0734" fbc:label="G_b0734">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152946,13 +160155,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0432">
+            <rdf:Description rdf:about="#G_b0734">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001495"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABJ1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945080"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10174"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153022,7 +160231,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2143" sboTerm="SBO:0000243" fbc:id="G_b2143" fbc:name="G_b2143" fbc:label="G_b2143">
+      <fbc:geneProduct metaid="G_b0432" sboTerm="SBO:0000243" fbc:id="G_b0432" fbc:name="G_b0432" fbc:label="G_b0432">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153030,20 +160239,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2143">
+            <rdf:Description rdf:about="#G_b0432">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABF6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946663"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABJ1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10178"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2162" sboTerm="SBO:0000243" fbc:id="G_b2162" fbc:name="G_b2162" fbc:label="G_b2162">
+      <fbc:geneProduct metaid="G_b2143" sboTerm="SBO:0000243" fbc:id="G_b2143" fbc:name="G_b2143" fbc:label="G_b2143">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153051,13 +160260,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2162">
+            <rdf:Description rdf:about="#G_b2143">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946646"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABF6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10137"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153085,6 +160294,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2162" sboTerm="SBO:0000243" fbc:id="G_b2162" fbc:name="G_b2162" fbc:label="G_b2162">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2162">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12030"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2066" sboTerm="SBO:0000243" fbc:id="G_b2066" fbc:name="G_b2066" fbc:label="G_b2066">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153255,6 +160485,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1409" sboTerm="SBO:0000243" fbc:id="G_b1409" fbc:name="G_b1409" fbc:label="G_b1409">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1409">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJY4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175641"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0175" sboTerm="SBO:0000243" fbc:id="G_b0175" fbc:name="G_b0175" fbc:label="G_b0175">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153276,26 +160526,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1409" sboTerm="SBO:0000243" fbc:id="G_b1409" fbc:name="G_b1409" fbc:label="G_b1409">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1409">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJY4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175641"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3041" sboTerm="SBO:0000243" fbc:id="G_b3041" fbc:name="G_b3041" fbc:label="G_b3041">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153434,30 +160664,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1772" sboTerm="SBO:0000243" fbc:id="G_b1772" fbc:name="G_b1772" fbc:label="G_b1772">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1772">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002173"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029056"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11397"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P50845"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0754" sboTerm="SBO:0000243" fbc:id="G_b0754" fbc:name="G_b0754" fbc:label="G_b0754">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153563,27 +160769,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1490" sboTerm="SBO:0000243" fbc:id="G_b1490" fbc:name="G_b1490" fbc:label="G_b1490">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1490">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004965"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA89"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13793"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1025" sboTerm="SBO:0000243" fbc:id="G_b1025" fbc:name="G_b1025" fbc:label="G_b1025">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153605,77 +160790,70 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1535" sboTerm="SBO:0000243" fbc:id="G_b1535" fbc:name="G_b1535" fbc:label="G_b1535">
+      <fbc:geneProduct metaid="G_b1956" sboTerm="SBO:0000243" fbc:id="G_b1956" fbc:name="G_b1956" fbc:label="G_b1956">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1535">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005123"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946075"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11643"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1786" sboTerm="SBO:0000243" fbc:id="G_b1786" fbc:name="G_b1786" fbc:label="G_b1786">
+      <fbc:geneProduct metaid="G_b3210" sboTerm="SBO:0000243" fbc:id="G_b3210" fbc:name="G_b3210" fbc:label="G_b3210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1794" sboTerm="SBO:0000243" fbc:id="G_b1794" fbc:name="G_b1794" fbc:label="G_b1794">
+      <fbc:geneProduct metaid="G_b3405" sboTerm="SBO:0000243" fbc:id="G_b3405" fbc:name="G_b3405" fbc:label="G_b3405">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1794">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005972"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76245"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948969"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13502"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1522" sboTerm="SBO:0000243" fbc:id="G_b1522" fbc:name="G_b1522" fbc:label="G_b1522">
+      <fbc:geneProduct metaid="G_b0385" sboTerm="SBO:0000243" fbc:id="G_b0385" fbc:name="G_b0385" fbc:label="G_b0385">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0385" sboTerm="SBO:0000243" fbc:id="G_b0385" fbc:name="G_b0385" fbc:label="G_b0385">
+      <fbc:geneProduct metaid="G_b2370" sboTerm="SBO:0000243" fbc:id="G_b2370" fbc:name="G_b2370" fbc:label="G_b2370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1785" sboTerm="SBO:0000243" fbc:id="G_b1785" fbc:name="G_b1785" fbc:label="G_b1785">
+      <fbc:geneProduct metaid="G_b1786" sboTerm="SBO:0000243" fbc:id="G_b1786" fbc:name="G_b1786" fbc:label="G_b1786">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1956" sboTerm="SBO:0000243" fbc:id="G_b1956" fbc:name="G_b1956" fbc:label="G_b1956">
+      <fbc:geneProduct metaid="G_b1794" sboTerm="SBO:0000243" fbc:id="G_b1794" fbc:name="G_b1794" fbc:label="G_b1794">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1794">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13502"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1522" sboTerm="SBO:0000243" fbc:id="G_b1522" fbc:name="G_b1522" fbc:label="G_b1522">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153703,33 +160881,61 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2370" sboTerm="SBO:0000243" fbc:id="G_b2370" fbc:name="G_b2370" fbc:label="G_b2370">
+      <fbc:geneProduct metaid="G_b1969" sboTerm="SBO:0000243" fbc:id="G_b1969" fbc:name="G_b1969" fbc:label="G_b1969">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1969" sboTerm="SBO:0000243" fbc:id="G_b1969" fbc:name="G_b1969" fbc:label="G_b1969">
+      <fbc:geneProduct metaid="G_b1535" sboTerm="SBO:0000243" fbc:id="G_b1535" fbc:name="G_b1535" fbc:label="G_b1535">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1535">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11643"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3210" sboTerm="SBO:0000243" fbc:id="G_b3210" fbc:name="G_b3210" fbc:label="G_b3210">
+      <fbc:geneProduct metaid="G_b1785" sboTerm="SBO:0000243" fbc:id="G_b1785" fbc:name="G_b1785" fbc:label="G_b1785">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3405" sboTerm="SBO:0000243" fbc:id="G_b3405" fbc:name="G_b3405" fbc:label="G_b3405">
+      <fbc:geneProduct metaid="G_b1490" sboTerm="SBO:0000243" fbc:id="G_b1490" fbc:name="G_b1490" fbc:label="G_b1490">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1490">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA89"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13793"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2341" sboTerm="SBO:0000243" fbc:id="G_b2341" fbc:name="G_b2341" fbc:label="G_b2341">
         <notes>
@@ -153801,7 +161007,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1200" sboTerm="SBO:0000243" fbc:id="G_b1200" fbc:name="G_b1200" fbc:label="G_b1200">
+      <fbc:geneProduct metaid="G_b1198" sboTerm="SBO:0000243" fbc:id="G_b1198" fbc:name="G_b1198" fbc:label="G_b1198">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153809,13 +161015,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1200">
+            <rdf:Description rdf:about="#G_b1198">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12399"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153843,7 +161049,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1198" sboTerm="SBO:0000243" fbc:id="G_b1198" fbc:name="G_b1198" fbc:label="G_b1198">
+      <fbc:geneProduct metaid="G_b1200" sboTerm="SBO:0000243" fbc:id="G_b1200" fbc:name="G_b1200" fbc:label="G_b1200">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153851,13 +161057,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1198">
+            <rdf:Description rdf:about="#G_b1200">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004024"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13901"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153906,7 +161112,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0590" sboTerm="SBO:0000243" fbc:id="G_b0590" fbc:name="G_b0590" fbc:label="G_b0590">
+      <fbc:geneProduct metaid="G_b0589" sboTerm="SBO:0000243" fbc:id="G_b0589" fbc:name="G_b0589" fbc:label="G_b0589">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153914,20 +161120,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0590">
+            <rdf:Description rdf:about="#G_b0589">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23876"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10296"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10298"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0588" sboTerm="SBO:0000243" fbc:id="G_b0588" fbc:name="G_b0588" fbc:label="G_b0588">
+      <fbc:geneProduct metaid="G_b0592" sboTerm="SBO:0000243" fbc:id="G_b0592" fbc:name="G_b0592" fbc:label="G_b0592">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153935,20 +161141,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0588">
+            <rdf:Description rdf:about="#G_b0592">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10295"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEL6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10294"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0592" sboTerm="SBO:0000243" fbc:id="G_b0592" fbc:name="G_b0592" fbc:label="G_b0592">
+      <fbc:geneProduct metaid="G_b0590" sboTerm="SBO:0000243" fbc:id="G_b0590" fbc:name="G_b0590" fbc:label="G_b0590">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153956,20 +161162,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0592">
+            <rdf:Description rdf:about="#G_b0590">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEL6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10296"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0589" sboTerm="SBO:0000243" fbc:id="G_b0589" fbc:name="G_b0589" fbc:label="G_b0589">
+      <fbc:geneProduct metaid="G_b0588" sboTerm="SBO:0000243" fbc:id="G_b0588" fbc:name="G_b0588" fbc:label="G_b0588">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153977,13 +161183,34 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0589">
+            <rdf:Description rdf:about="#G_b0588">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945209"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10295"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2155" sboTerm="SBO:0000243" fbc:id="G_b2155" fbc:name="G_b2155" fbc:label="G_b2155">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2155">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10155"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154011,27 +161238,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2155" sboTerm="SBO:0000243" fbc:id="G_b2155" fbc:name="G_b2155" fbc:label="G_b2155">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2155">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17315"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10155"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2541" sboTerm="SBO:0000243" fbc:id="G_b2541" fbc:name="G_b2541" fbc:label="G_b2541">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154116,7 +161322,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0048" sboTerm="SBO:0000243" fbc:id="G_b0048" fbc:name="G_b0048" fbc:label="G_b0048">
+      <fbc:geneProduct metaid="G_b2245" sboTerm="SBO:0000243" fbc:id="G_b2245" fbc:name="G_b2245" fbc:label="G_b2245">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154124,13 +161330,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0048">
+            <rdf:Description rdf:about="#G_b2245">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000164"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABQ4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944790"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14083"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154158,6 +161364,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0048" sboTerm="SBO:0000243" fbc:id="G_b0048" fbc:name="G_b0048" fbc:label="G_b0048">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0048">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABQ4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10326"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2315" sboTerm="SBO:0000243" fbc:id="G_b2315" fbc:name="G_b2315" fbc:label="G_b2315">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154408,6 +161635,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1406" sboTerm="SBO:0000243" fbc:id="G_b1406" fbc:name="G_b1406" fbc:label="G_b1406">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1406">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045398"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2210" sboTerm="SBO:0000243" fbc:id="G_b2210" fbc:name="G_b2210" fbc:label="G_b2210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154516,7 +161762,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1873" sboTerm="SBO:0000243" fbc:id="G_b1873" fbc:name="G_b1873" fbc:label="G_b1873">
+      <fbc:geneProduct metaid="G_b0894" sboTerm="SBO:0000243" fbc:id="G_b0894" fbc:name="G_b0894" fbc:label="G_b0894">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154524,13 +161770,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1873">
+            <rdf:Description rdf:about="#G_b0894">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006246"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52005"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946490"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P18775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10232"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154579,7 +161825,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1872" sboTerm="SBO:0000243" fbc:id="G_b1872" fbc:name="G_b1872" fbc:label="G_b1872">
+      <fbc:geneProduct metaid="G_b1588" sboTerm="SBO:0000243" fbc:id="G_b1588" fbc:name="G_b1588" fbc:label="G_b1588">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154587,20 +161833,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1872">
+            <rdf:Description rdf:about="#G_b1588">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946389"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13844"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0894" sboTerm="SBO:0000243" fbc:id="G_b0894" fbc:name="G_b0894" fbc:label="G_b0894">
+      <fbc:geneProduct metaid="G_b1872" sboTerm="SBO:0000243" fbc:id="G_b1872" fbc:name="G_b1872" fbc:label="G_b1872">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154608,13 +161854,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0894">
+            <rdf:Description rdf:about="#G_b1872">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003044"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P18775"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945508"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946389"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13276"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154628,7 +161874,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1588" sboTerm="SBO:0000243" fbc:id="G_b1588" fbc:name="G_b1588" fbc:label="G_b1588">
+      <fbc:geneProduct metaid="G_b1873" sboTerm="SBO:0000243" fbc:id="G_b1873" fbc:name="G_b1873" fbc:label="G_b1873">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154636,13 +161882,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1588">
+            <rdf:Description rdf:about="#G_b1873">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005307"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945268"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13277"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154674,6 +161920,25 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2075" sboTerm="SBO:0000243" fbc:id="G_b2075" fbc:name="G_b2075" fbc:label="G_b2075">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2075">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0099" sboTerm="SBO:0000243" fbc:id="G_b0099" fbc:name="G_b0099" fbc:label="G_b0099">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154737,6 +162002,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0425" sboTerm="SBO:0000243" fbc:id="G_b0425" fbc:name="G_b0425" fbc:label="G_b0425">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0425">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9J4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13271"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3774" sboTerm="SBO:0000243" fbc:id="G_b3774" fbc:name="G_b3774" fbc:label="G_b3774">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154764,7 +162050,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0425" sboTerm="SBO:0000243" fbc:id="G_b0425" fbc:name="G_b0425" fbc:label="G_b0425">
+      <fbc:geneProduct metaid="G_b2546" sboTerm="SBO:0000243" fbc:id="G_b2546" fbc:name="G_b2546" fbc:label="G_b2546">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154772,13 +162058,36 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0425">
+            <rdf:Description rdf:about="#G_b2546">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9J4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q186E3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q186E3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36948"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3753" sboTerm="SBO:0000243" fbc:id="G_b3753" fbc:name="G_b3753" fbc:label="G_b3753">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3753">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P36949"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155123,7 +162432,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0269" sboTerm="SBO:0000243" fbc:id="G_b0269" fbc:name="G_b0269" fbc:label="G_b0269">
+      <fbc:geneProduct metaid="G_b4297" sboTerm="SBO:0000243" fbc:id="G_b4297" fbc:name="G_b4297" fbc:label="G_b4297">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155131,20 +162440,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0269">
+            <rdf:Description rdf:about="#G_b4297">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77596"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944928"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12549"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4297" sboTerm="SBO:0000243" fbc:id="G_b4297" fbc:name="G_b4297" fbc:label="G_b4297">
+      <fbc:geneProduct metaid="G_b0269" sboTerm="SBO:0000243" fbc:id="G_b0269" fbc:name="G_b0269" fbc:label="G_b0269">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155152,13 +162461,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4297">
+            <rdf:Description rdf:about="#G_b0269">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014087"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39358"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13345"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155382,7 +162691,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2440" sboTerm="SBO:0000243" fbc:id="G_b2440" fbc:name="G_b2440" fbc:label="G_b2440">
+      <fbc:geneProduct metaid="G_b2441" sboTerm="SBO:0000243" fbc:id="G_b2441" fbc:name="G_b2441" fbc:label="G_b2441">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155390,20 +162699,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2440">
+            <rdf:Description rdf:about="#G_b2441">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008043"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19636"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946925"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG50007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEJ6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG50006"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2441" sboTerm="SBO:0000243" fbc:id="G_b2441" fbc:name="G_b2441" fbc:label="G_b2441">
+      <fbc:geneProduct metaid="G_b2440" sboTerm="SBO:0000243" fbc:id="G_b2440" fbc:name="G_b2440" fbc:label="G_b2440">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155411,13 +162720,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2441">
+            <rdf:Description rdf:about="#G_b2440">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008046"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEJ6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946924"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG50006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008043"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946925"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG50007"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155431,27 +162740,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3697" sboTerm="SBO:0000243" fbc:id="G_b3697" fbc:name="G_b3697" fbc:label="G_b3697">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3697">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11195"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2293" sboTerm="SBO:0000243" fbc:id="G_b2293" fbc:name="G_b2293" fbc:label="G_b2293">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -155494,7 +162782,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3946" sboTerm="SBO:0000243" fbc:id="G_b3946" fbc:name="G_b3946" fbc:label="G_b3946">
+      <fbc:geneProduct metaid="G_b3697" sboTerm="SBO:0000243" fbc:id="G_b3697" fbc:name="G_b3697" fbc:label="G_b3697">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155502,13 +162790,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3946">
+            <rdf:Description rdf:about="#G_b3697">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32669"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11195"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155536,6 +162824,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3946" sboTerm="SBO:0000243" fbc:id="G_b3946" fbc:name="G_b3946" fbc:label="G_b3946">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3946">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11905"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3826" sboTerm="SBO:0000243" fbc:id="G_b3826" fbc:name="G_b3826" fbc:label="G_b3826">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -155627,7 +162936,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1805" sboTerm="SBO:0000243" fbc:id="G_b1805" fbc:name="G_b1805" fbc:label="G_b1805">
+      <fbc:geneProduct metaid="G_b1701" sboTerm="SBO:0000243" fbc:id="G_b1701" fbc:name="G_b1701" fbc:label="G_b1701">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155635,20 +162944,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1805">
+            <rdf:Description rdf:about="#G_b1701">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006005"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P38135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12357"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1701" sboTerm="SBO:0000243" fbc:id="G_b1701" fbc:name="G_b1701" fbc:label="G_b1701">
+      <fbc:geneProduct metaid="G_b1805" sboTerm="SBO:0000243" fbc:id="G_b1805" fbc:name="G_b1805" fbc:label="G_b1805">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155656,13 +162965,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1701">
+            <rdf:Description rdf:about="#G_b1805">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005676"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P38135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11530"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155704,7 +163013,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2764" sboTerm="SBO:0000243" fbc:id="G_b2764" fbc:name="G_b2764" fbc:label="G_b2764">
+      <fbc:geneProduct metaid="G_b2763" sboTerm="SBO:0000243" fbc:id="G_b2763" fbc:name="G_b2763" fbc:label="G_b2763">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155712,20 +163021,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2764">
+            <rdf:Description rdf:about="#G_b2763">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P38038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947239"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10190"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2763" sboTerm="SBO:0000243" fbc:id="G_b2763" fbc:name="G_b2763" fbc:label="G_b2763">
+      <fbc:geneProduct metaid="G_b2764" sboTerm="SBO:0000243" fbc:id="G_b2764" fbc:name="G_b2764" fbc:label="G_b2764">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155733,13 +163042,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2763">
+            <rdf:Description rdf:about="#G_b2764">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17846"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947231"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P38038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10191"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155767,7 +163076,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2075" sboTerm="SBO:0000243" fbc:id="G_b2075" fbc:name="G_b2075" fbc:label="G_b2075">
+      <fbc:geneProduct metaid="G_b0045" sboTerm="SBO:0000243" fbc:id="G_b0045" fbc:name="G_b0045" fbc:label="G_b0045">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155775,11 +163084,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2075">
+            <rdf:Description rdf:about="#G_b0045">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34718"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155805,7 +163121,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0045" sboTerm="SBO:0000243" fbc:id="G_b0045" fbc:name="G_b0045" fbc:label="G_b0045">
+      <fbc:geneProduct metaid="G_b1773" sboTerm="SBO:0000243" fbc:id="G_b1773" fbc:name="G_b1773" fbc:label="G_b1773">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2097" sboTerm="SBO:0000243" fbc:id="G_b2097" fbc:name="G_b2097" fbc:label="G_b2097">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155813,18 +163136,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0045">
+            <rdf:Description rdf:about="#G_b2097">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046282"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046282"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003663"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020846"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12802"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006941"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14062"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155856,35 +163174,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1773" sboTerm="SBO:0000243" fbc:id="G_b1773" fbc:name="G_b1773" fbc:label="G_b1773">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2097" sboTerm="SBO:0000243" fbc:id="G_b2097" fbc:name="G_b2097" fbc:label="G_b2097">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2097">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006941"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946632"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14062"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2930" sboTerm="SBO:0000243" fbc:id="G_b2930" fbc:name="G_b2930" fbc:label="G_b2930">
+      <fbc:geneProduct metaid="G_b4232" sboTerm="SBO:0000243" fbc:id="G_b4232" fbc:name="G_b4232" fbc:label="G_b4232">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155892,13 +163182,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2930">
+            <rdf:Description rdf:about="#G_b4232">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21437"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947410"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013842"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10283"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155926,7 +163216,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4232" sboTerm="SBO:0000243" fbc:id="G_b4232" fbc:name="G_b4232" fbc:label="G_b4232">
+      <fbc:geneProduct metaid="G_b2930" sboTerm="SBO:0000243" fbc:id="G_b2930" fbc:name="G_b2930" fbc:label="G_b2930">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155934,13 +163224,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4232">
+            <rdf:Description rdf:about="#G_b2930">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11245"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156010,7 +163300,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1019" sboTerm="SBO:0000243" fbc:id="G_b1019" fbc:name="G_b1019" fbc:label="G_b1019">
+      <fbc:geneProduct metaid="G_b0475" sboTerm="SBO:0000243" fbc:id="G_b0475" fbc:name="G_b0475" fbc:label="G_b0475">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156018,13 +163308,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1019">
+            <rdf:Description rdf:about="#G_b0475">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946500"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11735"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10431"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156052,7 +163342,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0475" sboTerm="SBO:0000243" fbc:id="G_b0475" fbc:name="G_b0475" fbc:label="G_b0475">
+      <fbc:geneProduct metaid="G_b1019" sboTerm="SBO:0000243" fbc:id="G_b1019" fbc:name="G_b1019" fbc:label="G_b1019">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156060,19 +163350,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0475">
+            <rdf:Description rdf:about="#G_b1019">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001649"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947532"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11735"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1501" sboTerm="SBO:0000243" fbc:id="G_b1501" fbc:name="G_b1501" fbc:label="G_b1501">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3891" sboTerm="SBO:0000243" fbc:id="G_b3891" fbc:name="G_b3891" fbc:label="G_b3891">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156092,13 +163389,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1501" sboTerm="SBO:0000243" fbc:id="G_b1501" fbc:name="G_b1501" fbc:label="G_b1501">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3895" sboTerm="SBO:0000243" fbc:id="G_b3895" fbc:name="G_b3895" fbc:label="G_b3895">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156121,48 +163411,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3894" sboTerm="SBO:0000243" fbc:id="G_b3894" fbc:name="G_b3894" fbc:label="G_b3894">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3894">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948394"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11858"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1476" sboTerm="SBO:0000243" fbc:id="G_b1476" fbc:name="G_b1476" fbc:label="G_b1476">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1476">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004921"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEK7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11229"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3893" sboTerm="SBO:0000243" fbc:id="G_b3893" fbc:name="G_b3893" fbc:label="G_b3893">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156184,7 +163432,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1475" sboTerm="SBO:0000243" fbc:id="G_b1475" fbc:name="G_b1475" fbc:label="G_b1475">
+      <fbc:geneProduct metaid="G_b3892" sboTerm="SBO:0000243" fbc:id="G_b3892" fbc:name="G_b3892" fbc:label="G_b3892">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156192,20 +163440,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1475">
+            <rdf:Description rdf:about="#G_b3892">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAJ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11228"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEL0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11856"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3892" sboTerm="SBO:0000243" fbc:id="G_b3892" fbc:name="G_b3892" fbc:label="G_b3892">
+      <fbc:geneProduct metaid="G_b1476" sboTerm="SBO:0000243" fbc:id="G_b1476" fbc:name="G_b1476" fbc:label="G_b1476">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156213,13 +163461,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3892">
+            <rdf:Description rdf:about="#G_b1476">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012705"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEL0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948383"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004921"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEK7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11229"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156247,6 +163495,48 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3894" sboTerm="SBO:0000243" fbc:id="G_b3894" fbc:name="G_b3894" fbc:label="G_b3894">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3894">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11858"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1475" sboTerm="SBO:0000243" fbc:id="G_b1475" fbc:name="G_b1475" fbc:label="G_b1475">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1475">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11228"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0935" sboTerm="SBO:0000243" fbc:id="G_b0935" fbc:name="G_b0935" fbc:label="G_b0935">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156268,14 +163558,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1203" sboTerm="SBO:0000243" fbc:id="G_b1203" fbc:name="G_b1203" fbc:label="G_b1203">
+      <fbc:geneProduct metaid="G_b2511" sboTerm="SBO:0000243" fbc:id="G_b2511" fbc:name="G_b2511" fbc:label="G_b2511">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2511" sboTerm="SBO:0000243" fbc:id="G_b2511" fbc:name="G_b2511" fbc:label="G_b2511">
+      <fbc:geneProduct metaid="G_b1203" sboTerm="SBO:0000243" fbc:id="G_b1203" fbc:name="G_b1203" fbc:label="G_b1203">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156369,7 +163659,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4288" sboTerm="SBO:0000243" fbc:id="G_b4288" fbc:name="G_b4288" fbc:label="G_b4288">
+      <fbc:geneProduct metaid="G_b3070" sboTerm="SBO:0000243" fbc:id="G_b3070" fbc:name="G_b3070" fbc:label="G_b3070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156377,20 +163667,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4288">
+            <rdf:Description rdf:about="#G_b3070">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946816"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12953"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4290" sboTerm="SBO:0000243" fbc:id="G_b4290" fbc:name="G_b4290" fbc:label="G_b4290">
+      <fbc:geneProduct metaid="G_b4289" sboTerm="SBO:0000243" fbc:id="G_b4289" fbc:name="G_b4289" fbc:label="G_b4289">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156398,20 +163688,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4290">
+            <rdf:Description rdf:about="#G_b4289">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946838"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10288"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4287" sboTerm="SBO:0000243" fbc:id="G_b4287" fbc:name="G_b4287" fbc:label="G_b4287">
+      <fbc:geneProduct metaid="G_b4290" sboTerm="SBO:0000243" fbc:id="G_b4290" fbc:name="G_b4290" fbc:label="G_b4290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156419,20 +163709,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4287">
+            <rdf:Description rdf:about="#G_b4290">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014057"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948819"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10287"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4289" sboTerm="SBO:0000243" fbc:id="G_b4289" fbc:name="G_b4289" fbc:label="G_b4289">
+      <fbc:geneProduct metaid="G_b4288" sboTerm="SBO:0000243" fbc:id="G_b4288" fbc:name="G_b4288" fbc:label="G_b4288">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156440,20 +163730,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4289">
+            <rdf:Description rdf:about="#G_b4288">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948826"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10289"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3006" sboTerm="SBO:0000243" fbc:id="G_b3006" fbc:name="G_b3006" fbc:label="G_b3006">
+      <fbc:geneProduct metaid="G_b4287" sboTerm="SBO:0000243" fbc:id="G_b4287" fbc:name="G_b4287" fbc:label="G_b4287">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156461,20 +163751,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3006">
+            <rdf:Description rdf:about="#G_b4287">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009869"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABU7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945420"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10290"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1252" sboTerm="SBO:0000243" fbc:id="G_b1252" fbc:name="G_b1252" fbc:label="G_b1252">
+      <fbc:geneProduct metaid="G_b3006" sboTerm="SBO:0000243" fbc:id="G_b3006" fbc:name="G_b3006" fbc:label="G_b3006">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156482,13 +163772,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1252">
+            <rdf:Description rdf:about="#G_b3006">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02929"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABU7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10271"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156537,7 +163827,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3070" sboTerm="SBO:0000243" fbc:id="G_b3070" fbc:name="G_b3070" fbc:label="G_b3070">
+      <fbc:geneProduct metaid="G_b1252" sboTerm="SBO:0000243" fbc:id="G_b1252" fbc:name="G_b1252" fbc:label="G_b1252">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156545,26 +163835,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3070">
+            <rdf:Description rdf:about="#G_b1252">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010079"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947582"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02929"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11012"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4582" sboTerm="SBO:0000243" fbc:id="G_b4582" fbc:name="G_b4582" fbc:label="G_b4582">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0805" sboTerm="SBO:0000243" fbc:id="G_b0805" fbc:name="G_b0805" fbc:label="G_b0805">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156586,7 +163869,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4490" sboTerm="SBO:0000243" fbc:id="G_b4490" fbc:name="G_b4490" fbc:label="G_b4490">
+      <fbc:geneProduct metaid="G_b4582" sboTerm="SBO:0000243" fbc:id="G_b4582" fbc:name="G_b4582" fbc:label="G_b4582">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1018" sboTerm="SBO:0000243" fbc:id="G_b1018" fbc:name="G_b1018" fbc:label="G_b1018">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156594,19 +163884,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4490">
+            <rdf:Description rdf:about="#G_b1018">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10574"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1018" sboTerm="SBO:0000243" fbc:id="G_b1018" fbc:name="G_b1018" fbc:label="G_b1018">
+      <fbc:geneProduct metaid="G_b4490" sboTerm="SBO:0000243" fbc:id="G_b4490" fbc:name="G_b4490" fbc:label="G_b4490">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156614,10 +163902,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1018">
+            <rdf:Description rdf:about="#G_b4490">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39595"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156687,7 +163977,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0152" sboTerm="SBO:0000243" fbc:id="G_b0152" fbc:name="G_b0152" fbc:label="G_b0152">
+      <fbc:geneProduct metaid="G_b0153" sboTerm="SBO:0000243" fbc:id="G_b0153" fbc:name="G_b0153" fbc:label="G_b0153">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156695,20 +163985,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0152">
+            <rdf:Description rdf:about="#G_b0153">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947510"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10303"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0153" sboTerm="SBO:0000243" fbc:id="G_b0153" fbc:name="G_b0153" fbc:label="G_b0153">
+      <fbc:geneProduct metaid="G_b0152" sboTerm="SBO:0000243" fbc:id="G_b0152" fbc:name="G_b0152" fbc:label="G_b0152">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156716,13 +164006,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0153">
+            <rdf:Description rdf:about="#G_b0152">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000526"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06972"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10305"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156841,7 +164131,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3924" sboTerm="SBO:0000243" fbc:id="G_b3924" fbc:name="G_b3924" fbc:label="G_b3924">
+      <fbc:geneProduct metaid="G_b0684" sboTerm="SBO:0000243" fbc:id="G_b0684" fbc:name="G_b0684" fbc:label="G_b0684">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156849,20 +164139,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3924">
+            <rdf:Description rdf:about="#G_b0684">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012818"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28861"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948414"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11518"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P61949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJU0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175468"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0684" sboTerm="SBO:0000243" fbc:id="G_b0684" fbc:name="G_b0684" fbc:label="G_b0684">
+      <fbc:geneProduct metaid="G_b3924" sboTerm="SBO:0000243" fbc:id="G_b3924" fbc:name="G_b3924" fbc:label="G_b3924">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156870,19 +164166,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0684">
+            <rdf:Description rdf:about="#G_b3924">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002332"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P61949"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945293"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008254"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJU0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11518"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157080,7 +164370,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4152" sboTerm="SBO:0000243" fbc:id="G_b4152" fbc:name="G_b4152" fbc:label="G_b4152">
+      <fbc:geneProduct metaid="G_b4153" sboTerm="SBO:0000243" fbc:id="G_b4153" fbc:name="G_b4153" fbc:label="G_b4153">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157088,20 +164378,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4152">
+            <rdf:Description rdf:about="#G_b4153">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013598"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Q0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948680"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013602"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC47"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10331"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4153" sboTerm="SBO:0000243" fbc:id="G_b4153" fbc:name="G_b4153" fbc:label="G_b4153">
+      <fbc:geneProduct metaid="G_b4152" sboTerm="SBO:0000243" fbc:id="G_b4152" fbc:name="G_b4152" fbc:label="G_b4152">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157109,13 +164399,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4153">
+            <rdf:Description rdf:about="#G_b4152">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013602"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC47"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948666"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Q0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10332"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157252,33 +164542,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2387" sboTerm="SBO:0000243" fbc:id="G_b2387" fbc:name="G_b2387" fbc:label="G_b2387">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2387">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003353"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013011"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CU9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CU9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003353"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013011"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q184K5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q184K5"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3900" sboTerm="SBO:0000243" fbc:id="G_b3900" fbc:name="G_b3900" fbc:label="G_b3900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -157356,6 +164619,33 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2387" sboTerm="SBO:0000243" fbc:id="G_b2387" fbc:name="G_b2387" fbc:label="G_b2387">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2387">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CU9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CU9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q184K5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q184K5"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3950" sboTerm="SBO:0000243" fbc:id="G_b3950" fbc:name="G_b3950" fbc:label="G_b3950">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -157703,7 +164993,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3453" sboTerm="SBO:0000243" fbc:id="G_b3453" fbc:name="G_b3453" fbc:label="G_b3453">
+      <fbc:geneProduct metaid="G_b3452" sboTerm="SBO:0000243" fbc:id="G_b3452" fbc:name="G_b3452" fbc:label="G_b3452">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157711,20 +165001,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3453">
+            <rdf:Description rdf:about="#G_b3452">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG80"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947962"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P10905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11046"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3451" sboTerm="SBO:0000243" fbc:id="G_b3451" fbc:name="G_b3451" fbc:label="G_b3451">
+      <fbc:geneProduct metaid="G_b3453" sboTerm="SBO:0000243" fbc:id="G_b3453" fbc:name="G_b3453" fbc:label="G_b3453">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157732,20 +165022,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3451">
+            <rdf:Description rdf:about="#G_b3453">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P10906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947959"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG80"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11047"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3452" sboTerm="SBO:0000243" fbc:id="G_b3452" fbc:name="G_b3452" fbc:label="G_b3452">
+      <fbc:geneProduct metaid="G_b3451" sboTerm="SBO:0000243" fbc:id="G_b3451" fbc:name="G_b3451" fbc:label="G_b3451">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157753,13 +165043,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3452">
+            <rdf:Description rdf:about="#G_b3451">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P10905"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947957"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P10906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11049"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157787,7 +165077,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2242" sboTerm="SBO:0000243" fbc:id="G_b2242" fbc:name="G_b2242" fbc:label="G_b2242">
+      <fbc:geneProduct metaid="G_b2243" sboTerm="SBO:0000243" fbc:id="G_b2243" fbc:name="G_b2243" fbc:label="G_b2243">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157795,20 +165085,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2242">
+            <rdf:Description rdf:about="#G_b2243">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007424"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P13033"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946733"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946735"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10393"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2243" sboTerm="SBO:0000243" fbc:id="G_b2243" fbc:name="G_b2243" fbc:label="G_b2243">
+      <fbc:geneProduct metaid="G_b3426" sboTerm="SBO:0000243" fbc:id="G_b3426" fbc:name="G_b3426" fbc:label="G_b3426">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157816,20 +165106,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2243">
+            <rdf:Description rdf:about="#G_b3426">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007426"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946735"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P13035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947934"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10394"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3426" sboTerm="SBO:0000243" fbc:id="G_b3426" fbc:name="G_b3426" fbc:label="G_b3426">
+      <fbc:geneProduct metaid="G_b2242" sboTerm="SBO:0000243" fbc:id="G_b2242" fbc:name="G_b2242" fbc:label="G_b2242">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157837,13 +165127,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3426">
+            <rdf:Description rdf:about="#G_b2242">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011191"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P13035"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947934"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P13033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10392"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157913,7 +165203,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0678" sboTerm="SBO:0000243" fbc:id="G_b0678" fbc:name="G_b0678" fbc:label="G_b0678">
+      <fbc:geneProduct metaid="G_b3136" sboTerm="SBO:0000243" fbc:id="G_b3136" fbc:name="G_b3136" fbc:label="G_b3136">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157921,20 +165211,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0678">
+            <rdf:Description rdf:about="#G_b3136">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002304"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945290"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898481"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3136" sboTerm="SBO:0000243" fbc:id="G_b3136" fbc:name="G_b3136" fbc:label="G_b3136">
+      <fbc:geneProduct metaid="G_b0678" sboTerm="SBO:0000243" fbc:id="G_b0678" fbc:name="G_b0678" fbc:label="G_b0678">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157942,10 +165229,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3136">
+            <rdf:Description rdf:about="#G_b0678">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10633"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158314,14 +165604,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2092" sboTerm="SBO:0000243" fbc:id="G_b2092" fbc:name="G_b2092" fbc:label="G_b2092">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2094" sboTerm="SBO:0000243" fbc:id="G_b2094" fbc:name="G_b2094" fbc:label="G_b2094">
+      <fbc:geneProduct metaid="G_b2093" sboTerm="SBO:0000243" fbc:id="G_b2093" fbc:name="G_b2093" fbc:label="G_b2093">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158329,20 +165612,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2094">
+            <rdf:Description rdf:about="#G_b2093">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12415"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2093" sboTerm="SBO:0000243" fbc:id="G_b2093" fbc:name="G_b2093" fbc:label="G_b2093">
+      <fbc:geneProduct metaid="G_b2092" sboTerm="SBO:0000243" fbc:id="G_b2092" fbc:name="G_b2092" fbc:label="G_b2092">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2094" sboTerm="SBO:0000243" fbc:id="G_b2094" fbc:name="G_b2094" fbc:label="G_b2094">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158350,26 +165640,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2093">
+            <rdf:Description rdf:about="#G_b2094">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006930"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946610"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12415"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12414"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0845" sboTerm="SBO:0000243" fbc:id="G_b0845" fbc:name="G_b0845" fbc:label="G_b0845">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3093" sboTerm="SBO:0000243" fbc:id="G_b3093" fbc:name="G_b3093" fbc:label="G_b3093">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -158391,7 +165674,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2042" sboTerm="SBO:0000243" fbc:id="G_b2042" fbc:name="G_b2042" fbc:label="G_b2042">
+      <fbc:geneProduct metaid="G_b0845" sboTerm="SBO:0000243" fbc:id="G_b0845" fbc:name="G_b0845" fbc:label="G_b0845">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158419,7 +165702,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2149" sboTerm="SBO:0000243" fbc:id="G_b2149" fbc:name="G_b2149" fbc:label="G_b2149">
+      <fbc:geneProduct metaid="G_b2042" sboTerm="SBO:0000243" fbc:id="G_b2042" fbc:name="G_b2042" fbc:label="G_b2042">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4231" sboTerm="SBO:0000243" fbc:id="G_b4231" fbc:name="G_b4231" fbc:label="G_b4231">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158427,22 +165717,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2149">
+            <rdf:Description rdf:about="#G_b4231">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAG8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949036"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10592"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHQ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948754"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12439"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4485" sboTerm="SBO:0000243" fbc:id="G_b4485" fbc:name="G_b4485" fbc:label="G_b4485">
+      <fbc:geneProduct metaid="G_b4227" sboTerm="SBO:0000243" fbc:id="G_b4227" fbc:name="G_b4227" fbc:label="G_b4227">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158450,20 +165738,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4485">
+            <rdf:Description rdf:about="#G_b4227">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174118"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q6BEX0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847725"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12518"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12517"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4227" sboTerm="SBO:0000243" fbc:id="G_b4227" fbc:name="G_b4227" fbc:label="G_b4227">
+      <fbc:geneProduct metaid="G_b4485" sboTerm="SBO:0000243" fbc:id="G_b4485" fbc:name="G_b4485" fbc:label="G_b4485">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158471,13 +165759,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4227">
+            <rdf:Description rdf:about="#G_b4485">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39325"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q6BEX0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847725"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12518"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158505,7 +165793,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4231" sboTerm="SBO:0000243" fbc:id="G_b4231" fbc:name="G_b4231" fbc:label="G_b4231">
+      <fbc:geneProduct metaid="G_b2149" sboTerm="SBO:0000243" fbc:id="G_b2149" fbc:name="G_b2149" fbc:label="G_b2149">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158513,20 +165801,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4231">
+            <rdf:Description rdf:about="#G_b2149">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013840"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37772"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948754"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAG8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949036"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHQ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174347"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2150" sboTerm="SBO:0000243" fbc:id="G_b2150" fbc:name="G_b2150" fbc:label="G_b2150">
+      <fbc:geneProduct metaid="G_b4230" sboTerm="SBO:0000243" fbc:id="G_b4230" fbc:name="G_b4230" fbc:label="G_b4230">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158534,20 +165824,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2150">
+            <rdf:Description rdf:about="#G_b4230">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007108"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEE5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12520"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4230" sboTerm="SBO:0000243" fbc:id="G_b4230" fbc:name="G_b4230" fbc:label="G_b4230">
+      <fbc:geneProduct metaid="G_b2150" sboTerm="SBO:0000243" fbc:id="G_b2150" fbc:name="G_b2150" fbc:label="G_b2150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158555,13 +165845,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4230">
+            <rdf:Description rdf:about="#G_b2150">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013838"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39328"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948743"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEE5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10593"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158684,27 +165974,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2784" sboTerm="SBO:0000243" fbc:id="G_b2784" fbc:name="G_b2784" fbc:label="G_b2784">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2784">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10835"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3650" sboTerm="SBO:0000243" fbc:id="G_b3650" fbc:name="G_b3650" fbc:label="G_b3650">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -158735,6 +166004,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2784" sboTerm="SBO:0000243" fbc:id="G_b2784" fbc:name="G_b2784" fbc:label="G_b2784">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2784">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10835"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2051" sboTerm="SBO:0000243" fbc:id="G_b2051" fbc:name="G_b2051" fbc:label="G_b2051">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -158900,7 +166190,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0837" sboTerm="SBO:0000243" fbc:id="G_b0837" fbc:name="G_b0837" fbc:label="G_b0837">
+      <fbc:geneProduct metaid="G_b0124" sboTerm="SBO:0000243" fbc:id="G_b0124" fbc:name="G_b0124" fbc:label="G_b0124">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158908,20 +166198,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0837">
+            <rdf:Description rdf:about="#G_b0124">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002852"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945467"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944830"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10369"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0124" sboTerm="SBO:0000243" fbc:id="G_b0124" fbc:name="G_b0124" fbc:label="G_b0124">
+      <fbc:geneProduct metaid="G_b4294" sboTerm="SBO:0000243" fbc:id="G_b4294" fbc:name="G_b4294" fbc:label="G_b4294">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0837" sboTerm="SBO:0000243" fbc:id="G_b0837" fbc:name="G_b0837" fbc:label="G_b0837">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158929,26 +166226,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0124">
+            <rdf:Description rdf:about="#G_b0837">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944830"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002852"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13480"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4294" sboTerm="SBO:0000243" fbc:id="G_b4294" fbc:name="G_b4294" fbc:label="G_b4294">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4296" sboTerm="SBO:0000243" fbc:id="G_b4296" fbc:name="G_b4296" fbc:label="G_b4296">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -158969,7 +166259,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2365" sboTerm="SBO:0000243" fbc:id="G_b2365" fbc:name="G_b2365" fbc:label="G_b2365">
+      <fbc:geneProduct metaid="G_b3415" sboTerm="SBO:0000243" fbc:id="G_b3415" fbc:name="G_b3415" fbc:label="G_b3415">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158977,14 +166267,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2365">
+            <rdf:Description rdf:about="#G_b3415">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFZ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12380"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159012,7 +166301,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3415" sboTerm="SBO:0000243" fbc:id="G_b3415" fbc:name="G_b3415" fbc:label="G_b3415">
+      <fbc:geneProduct metaid="G_b2365" sboTerm="SBO:0000243" fbc:id="G_b2365" fbc:name="G_b2365" fbc:label="G_b2365">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159020,13 +166309,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3415">
+            <rdf:Description rdf:about="#G_b2365">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947924"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFZ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176793"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159080,7 +166370,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2787" sboTerm="SBO:0000243" fbc:id="G_b2787" fbc:name="G_b2787" fbc:label="G_b2787">
+      <fbc:geneProduct metaid="G_b2788" sboTerm="SBO:0000243" fbc:id="G_b2788" fbc:name="G_b2788" fbc:label="G_b2788">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159088,20 +166378,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2787">
+            <rdf:Description rdf:about="#G_b2788">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009134"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AES2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947258"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13168"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2788" sboTerm="SBO:0000243" fbc:id="G_b2788" fbc:name="G_b2788" fbc:label="G_b2788">
+      <fbc:geneProduct metaid="G_b2787" sboTerm="SBO:0000243" fbc:id="G_b2787" fbc:name="G_b2787" fbc:label="G_b2787">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159109,13 +166399,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2788">
+            <rdf:Description rdf:about="#G_b2787">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009136"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AES2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13167"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159408,7 +166698,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1493" sboTerm="SBO:0000243" fbc:id="G_b1493" fbc:name="G_b1493" fbc:label="G_b1493">
+      <fbc:geneProduct metaid="G_b3517" sboTerm="SBO:0000243" fbc:id="G_b3517" fbc:name="G_b3517" fbc:label="G_b3517">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159416,20 +166706,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1493">
+            <rdf:Description rdf:about="#G_b3517">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004976"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG50009"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3517" sboTerm="SBO:0000243" fbc:id="G_b3517" fbc:name="G_b3517" fbc:label="G_b3517">
+      <fbc:geneProduct metaid="G_b1493" sboTerm="SBO:0000243" fbc:id="G_b1493" fbc:name="G_b1493" fbc:label="G_b1493">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159437,13 +166727,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3517">
+            <rdf:Description rdf:about="#G_b1493">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011490"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG50009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11490"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159471,7 +166761,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3212" sboTerm="SBO:0000243" fbc:id="G_b3212" fbc:name="G_b3212" fbc:label="G_b3212">
+      <fbc:geneProduct metaid="G_b3213" sboTerm="SBO:0000243" fbc:id="G_b3213" fbc:name="G_b3213" fbc:label="G_b3213">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159479,20 +166769,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3212">
+            <rdf:Description rdf:about="#G_b3213">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09831"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947724"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10403"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10404"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3213" sboTerm="SBO:0000243" fbc:id="G_b3213" fbc:name="G_b3213" fbc:label="G_b3213">
+      <fbc:geneProduct metaid="G_b3212" sboTerm="SBO:0000243" fbc:id="G_b3212" fbc:name="G_b3212" fbc:label="G_b3212">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159500,20 +166790,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3213">
+            <rdf:Description rdf:about="#G_b3212">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09832"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10403"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1524" sboTerm="SBO:0000243" fbc:id="G_b1524" fbc:name="G_b1524" fbc:label="G_b1524">
+      <fbc:geneProduct metaid="G_b0485" sboTerm="SBO:0000243" fbc:id="G_b0485" fbc:name="G_b0485" fbc:label="G_b0485">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159521,20 +166811,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1524">
+            <rdf:Description rdf:about="#G_b0485">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6W0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944973"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13247"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0485" sboTerm="SBO:0000243" fbc:id="G_b0485" fbc:name="G_b0485" fbc:label="G_b0485">
+      <fbc:geneProduct metaid="G_b1524" sboTerm="SBO:0000243" fbc:id="G_b1524" fbc:name="G_b1524" fbc:label="G_b1524">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159542,13 +166832,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0485">
+            <rdf:Description rdf:about="#G_b1524">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77454"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6W0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13816"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159922,7 +167212,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2903" sboTerm="SBO:0000243" fbc:id="G_b2903" fbc:name="G_b2903" fbc:label="G_b2903">
+      <fbc:geneProduct metaid="G_b2904" sboTerm="SBO:0000243" fbc:id="G_b2904" fbc:name="G_b2904" fbc:label="G_b2904">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159930,20 +167220,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2903">
+            <rdf:Description rdf:about="#G_b2904">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009531"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33195"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947394"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6T9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10371"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2904" sboTerm="SBO:0000243" fbc:id="G_b2904" fbc:name="G_b2904" fbc:label="G_b2904">
+      <fbc:geneProduct metaid="G_b2905" sboTerm="SBO:0000243" fbc:id="G_b2905" fbc:name="G_b2905" fbc:label="G_b2905">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159951,20 +167241,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2904">
+            <rdf:Description rdf:about="#G_b2905">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009534"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6T9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947393"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11442"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2905" sboTerm="SBO:0000243" fbc:id="G_b2905" fbc:name="G_b2905" fbc:label="G_b2905">
+      <fbc:geneProduct metaid="G_b2903" sboTerm="SBO:0000243" fbc:id="G_b2903" fbc:name="G_b2903" fbc:label="G_b2903">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159972,13 +167262,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2905">
+            <rdf:Description rdf:about="#G_b2903">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27248"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947390"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11442"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33195"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11810"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160033,7 +167323,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4468" sboTerm="SBO:0000243" fbc:id="G_b4468" fbc:name="G_b4468" fbc:label="G_b4468">
+      <fbc:geneProduct metaid="G_b2979" sboTerm="SBO:0000243" fbc:id="G_b2979" fbc:name="G_b2979" fbc:label="G_b2979">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160041,13 +167331,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4468">
+            <rdf:Description rdf:about="#G_b2979">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52073"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847718"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEP9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12997"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160075,7 +167365,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2979" sboTerm="SBO:0000243" fbc:id="G_b2979" fbc:name="G_b2979" fbc:label="G_b2979">
+      <fbc:geneProduct metaid="G_b4468" sboTerm="SBO:0000243" fbc:id="G_b4468" fbc:name="G_b4468" fbc:label="G_b4468">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160083,13 +167373,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2979">
+            <rdf:Description rdf:about="#G_b4468">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEP9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947353"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12996"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160327,27 +167617,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1654" sboTerm="SBO:0000243" fbc:id="G_b1654" fbc:name="G_b1654" fbc:label="G_b1654">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1654">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005527"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC69"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12181"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3610" sboTerm="SBO:0000243" fbc:id="G_b3610" fbc:name="G_b3610" fbc:label="G_b3610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160369,6 +167638,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1654" sboTerm="SBO:0000243" fbc:id="G_b1654" fbc:name="G_b1654" fbc:label="G_b1654">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1654">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC69"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12181"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0849" sboTerm="SBO:0000243" fbc:id="G_b0849" fbc:name="G_b0849" fbc:label="G_b0849">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160432,6 +167722,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3038" sboTerm="SBO:0000243" fbc:id="G_b3038" fbc:name="G_b3038" fbc:label="G_b3038">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2988" sboTerm="SBO:0000243" fbc:id="G_b2988" fbc:name="G_b2988" fbc:label="G_b2988">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160453,13 +167750,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3038" sboTerm="SBO:0000243" fbc:id="G_b3038" fbc:name="G_b3038" fbc:label="G_b3038">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3500" sboTerm="SBO:0000243" fbc:id="G_b3500" fbc:name="G_b3500" fbc:label="G_b3500">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160546,7 +167836,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0831" sboTerm="SBO:0000243" fbc:id="G_b0831" fbc:name="G_b0831" fbc:label="G_b0831">
+      <fbc:geneProduct metaid="G_b0830" sboTerm="SBO:0000243" fbc:id="G_b0830" fbc:name="G_b0830" fbc:label="G_b0830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160554,13 +167844,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0831">
+            <rdf:Description rdf:about="#G_b0830">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002834"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13473"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160588,7 +167878,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0830" sboTerm="SBO:0000243" fbc:id="G_b0830" fbc:name="G_b0830" fbc:label="G_b0830">
+      <fbc:geneProduct metaid="G_b0831" sboTerm="SBO:0000243" fbc:id="G_b0831" fbc:name="G_b0831" fbc:label="G_b0831">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160596,13 +167886,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0830">
+            <rdf:Description rdf:about="#G_b0831">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002832"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75797"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13473"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13474"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160733,25 +168023,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2604" sboTerm="SBO:0000243" fbc:id="G_b2604" fbc:name="G_b2604" fbc:label="G_b2604">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2604">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1221" sboTerm="SBO:0000243" fbc:id="G_b1221" fbc:name="G_b1221" fbc:label="G_b1221">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160771,7 +168042,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2879" sboTerm="SBO:0000243" fbc:id="G_b2879" fbc:name="G_b2879" fbc:label="G_b2879">
+      <fbc:geneProduct metaid="G_b2604" sboTerm="SBO:0000243" fbc:id="G_b2604" fbc:name="G_b2604" fbc:label="G_b2604">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160779,12 +168050,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2879">
+            <rdf:Description rdf:about="#G_b2604">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100760443"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/14544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS29698.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160812,7 +168082,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0238" sboTerm="SBO:0000243" fbc:id="G_b0238" fbc:name="G_b0238" fbc:label="G_b0238">
+      <fbc:geneProduct metaid="G_b2879" sboTerm="SBO:0000243" fbc:id="G_b2879" fbc:name="G_b2879" fbc:label="G_b2879">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160820,17 +168090,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0238">
+            <rdf:Description rdf:about="#G_b2879">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9M5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944817"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10414"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002375"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WC61"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100760443"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/14544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS29698.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160863,6 +168128,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0238" sboTerm="SBO:0000243" fbc:id="G_b0238" fbc:name="G_b0238" fbc:label="G_b0238">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0238">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9M5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WC61"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176039"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0473" sboTerm="SBO:0000243" fbc:id="G_b0473" fbc:name="G_b0473" fbc:label="G_b0473">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160965,7 +168255,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3875" sboTerm="SBO:0000243" fbc:id="G_b3875" fbc:name="G_b3875" fbc:label="G_b3875">
+      <fbc:geneProduct metaid="G_b0957" sboTerm="SBO:0000243" fbc:id="G_b0957" fbc:name="G_b0957" fbc:label="G_b0957">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160973,20 +168263,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3875">
+            <rdf:Description rdf:about="#G_b0957">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012659"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948366"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10669"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0957" sboTerm="SBO:0000243" fbc:id="G_b0957" fbc:name="G_b0957" fbc:label="G_b0957">
+      <fbc:geneProduct metaid="G_b3875" sboTerm="SBO:0000243" fbc:id="G_b3875" fbc:name="G_b3875" fbc:label="G_b3875">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160994,13 +168284,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0957">
+            <rdf:Description rdf:about="#G_b3875">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13374"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161185,6 +168475,27 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0428" sboTerm="SBO:0000243" fbc:id="G_b0428" fbc:name="G_b0428" fbc:label="G_b0428">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0428">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEA5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10182"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2104" sboTerm="SBO:0000243" fbc:id="G_b2104" fbc:name="G_b2104" fbc:label="G_b2104">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -161213,7 +168524,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2388" sboTerm="SBO:0000243" fbc:id="G_b2388" fbc:name="G_b2388" fbc:label="G_b2388">
+      <fbc:geneProduct metaid="G_b1594" sboTerm="SBO:0000243" fbc:id="G_b1594" fbc:name="G_b1594" fbc:label="G_b1594">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161221,20 +168532,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2388">
+            <rdf:Description rdf:about="#G_b1594">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6V8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946858"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898013"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1594" sboTerm="SBO:0000243" fbc:id="G_b1594" fbc:name="G_b1594" fbc:label="G_b1594">
+      <fbc:geneProduct metaid="G_b2388" sboTerm="SBO:0000243" fbc:id="G_b2388" fbc:name="G_b2388" fbc:label="G_b2388">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161242,10 +168550,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1594">
+            <rdf:Description rdf:about="#G_b2388">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6V8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12957"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161336,7 +168647,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3473" sboTerm="SBO:0000243" fbc:id="G_b3473" fbc:name="G_b3473" fbc:label="G_b3473">
+      <fbc:geneProduct metaid="G_b0112" sboTerm="SBO:0000243" fbc:id="G_b0112" fbc:name="G_b0112" fbc:label="G_b0112">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161344,18 +168655,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3473">
+            <rdf:Description rdf:about="#G_b0112">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043408"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10084"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0112" sboTerm="SBO:0000243" fbc:id="G_b0112" fbc:name="G_b0112" fbc:label="G_b0112">
+      <fbc:geneProduct metaid="G_b3473" sboTerm="SBO:0000243" fbc:id="G_b3473" fbc:name="G_b3473" fbc:label="G_b3473">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161363,13 +168676,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0112">
+            <rdf:Description rdf:about="#G_b3473">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000384"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043408"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161544,7 +168855,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1314" sboTerm="SBO:0000243" fbc:id="G_b1314" fbc:name="G_b1314" fbc:label="G_b1314">
+      <fbc:geneProduct metaid="G_b0508" sboTerm="SBO:0000243" fbc:id="G_b0508" fbc:name="G_b0508" fbc:label="G_b0508">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161552,18 +168863,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1314">
+            <rdf:Description rdf:about="#G_b0508">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041767"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11584"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0508" sboTerm="SBO:0000243" fbc:id="G_b0508" fbc:name="G_b0508" fbc:label="G_b0508">
+      <fbc:geneProduct metaid="G_b1314" sboTerm="SBO:0000243" fbc:id="G_b1314" fbc:name="G_b1314" fbc:label="G_b1314">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161571,13 +168884,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0508">
+            <rdf:Description rdf:about="#G_b1314">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001756"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041767"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161647,28 +168958,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2875" sboTerm="SBO:0000243" fbc:id="G_b2875" fbc:name="G_b2875" fbc:label="G_b2875">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2875">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003777"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13992"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32147"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2881" sboTerm="SBO:0000243" fbc:id="G_b2881" fbc:name="G_b2881" fbc:label="G_b2881">
+      <fbc:geneProduct metaid="G_b0284" sboTerm="SBO:0000243" fbc:id="G_b0284" fbc:name="G_b0284" fbc:label="G_b0284">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161676,21 +168966,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2881">
+            <rdf:Description rdf:about="#G_b0284">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000674"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188E2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188E2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188E8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188E8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188G6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188G6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188F4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188F4"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161718,7 +169000,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0286" sboTerm="SBO:0000243" fbc:id="G_b0286" fbc:name="G_b0286" fbc:label="G_b0286">
+      <fbc:geneProduct metaid="G_b2875" sboTerm="SBO:0000243" fbc:id="G_b2875" fbc:name="G_b2875" fbc:label="G_b2875">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161726,30 +169008,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0286">
+            <rdf:Description rdf:about="#G_b2875">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188F6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188F6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003777"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32147"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2880" sboTerm="SBO:0000243" fbc:id="G_b2880" fbc:name="G_b2880" fbc:label="G_b2880">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2868" sboTerm="SBO:0000243" fbc:id="G_b2868" fbc:name="G_b2868" fbc:label="G_b2868">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -161771,7 +169042,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0284" sboTerm="SBO:0000243" fbc:id="G_b0284" fbc:name="G_b0284" fbc:label="G_b0284">
+      <fbc:geneProduct metaid="G_b0286" sboTerm="SBO:0000243" fbc:id="G_b0286" fbc:name="G_b0286" fbc:label="G_b0286">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161779,13 +169050,46 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0284">
+            <rdf:Description rdf:about="#G_b0286">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188F6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188F6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046617"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2881" sboTerm="SBO:0000243" fbc:id="G_b2881" fbc:name="G_b2881" fbc:label="G_b2881">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2881">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000674"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188F4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188F4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188E2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188E2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188E8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188E8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188G6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188G6"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161813,7 +169117,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2722" sboTerm="SBO:0000243" fbc:id="G_b2722" fbc:name="G_b2722" fbc:label="G_b2722">
+      <fbc:geneProduct metaid="G_b2880" sboTerm="SBO:0000243" fbc:id="G_b2880" fbc:name="G_b2880" fbc:label="G_b2880">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0972" sboTerm="SBO:0000243" fbc:id="G_b0972" fbc:name="G_b0972" fbc:label="G_b0972">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161821,20 +169132,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2722">
+            <rdf:Description rdf:about="#G_b0972">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008946"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16430"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948994"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10477"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69739"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10468"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2723" sboTerm="SBO:0000243" fbc:id="G_b2723" fbc:name="G_b2723" fbc:label="G_b2723">
+      <fbc:geneProduct metaid="G_b0974" sboTerm="SBO:0000243" fbc:id="G_b0974" fbc:name="G_b0974" fbc:label="G_b0974">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161842,20 +169153,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2723">
+            <rdf:Description rdf:about="#G_b0974">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008948"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16429"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAM1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10470"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2719" sboTerm="SBO:0000243" fbc:id="G_b2719" fbc:name="G_b2719" fbc:label="G_b2719">
+      <fbc:geneProduct metaid="G_b2995" sboTerm="SBO:0000243" fbc:id="G_b2995" fbc:name="G_b2995" fbc:label="G_b2995">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161863,20 +169174,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2719">
+            <rdf:Description rdf:about="#G_b2995">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008936"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947191"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009830"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11800"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2995" sboTerm="SBO:0000243" fbc:id="G_b2995" fbc:name="G_b2995" fbc:label="G_b2995">
+      <fbc:geneProduct metaid="G_b2721" sboTerm="SBO:0000243" fbc:id="G_b2721" fbc:name="G_b2721" fbc:label="G_b2721">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161884,20 +169195,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2995">
+            <rdf:Description rdf:about="#G_b2721">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009830"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008944"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10478"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2720" sboTerm="SBO:0000243" fbc:id="G_b2720" fbc:name="G_b2720" fbc:label="G_b2720">
+      <fbc:geneProduct metaid="G_b2487" sboTerm="SBO:0000243" fbc:id="G_b2487" fbc:name="G_b2487" fbc:label="G_b2487">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161905,20 +169216,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2720">
+            <rdf:Description rdf:about="#G_b2487">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008942"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16432"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946964"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14215"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0973" sboTerm="SBO:0000243" fbc:id="G_b0973" fbc:name="G_b0973" fbc:label="G_b0973">
+      <fbc:geneProduct metaid="G_b2994" sboTerm="SBO:0000243" fbc:id="G_b2994" fbc:name="G_b2994" fbc:label="G_b2994">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161926,20 +169237,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0973">
+            <rdf:Description rdf:about="#G_b2994">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003288"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACD8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACE0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11801"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2724" sboTerm="SBO:0000243" fbc:id="G_b2724" fbc:name="G_b2724" fbc:label="G_b2724">
+      <fbc:geneProduct metaid="G_b2723" sboTerm="SBO:0000243" fbc:id="G_b2723" fbc:name="G_b2723" fbc:label="G_b2723">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161947,20 +169258,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2724">
+            <rdf:Description rdf:about="#G_b2723">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAK1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008948"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10476"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2487" sboTerm="SBO:0000243" fbc:id="G_b2487" fbc:name="G_b2487" fbc:label="G_b2487">
+      <fbc:geneProduct metaid="G_b2719" sboTerm="SBO:0000243" fbc:id="G_b2719" fbc:name="G_b2719" fbc:label="G_b2719">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161968,20 +169279,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2487">
+            <rdf:Description rdf:about="#G_b2719">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77329"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946964"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10480"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2721" sboTerm="SBO:0000243" fbc:id="G_b2721" fbc:name="G_b2721" fbc:label="G_b2721">
+      <fbc:geneProduct metaid="G_b2996" sboTerm="SBO:0000243" fbc:id="G_b2996" fbc:name="G_b2996" fbc:label="G_b2996">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161989,20 +169300,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2721">
+            <rdf:Description rdf:about="#G_b2996">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008944"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16431"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947396"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAJ8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944842"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11799"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2997" sboTerm="SBO:0000243" fbc:id="G_b2997" fbc:name="G_b2997" fbc:label="G_b2997">
+      <fbc:geneProduct metaid="G_b2724" sboTerm="SBO:0000243" fbc:id="G_b2724" fbc:name="G_b2724" fbc:label="G_b2724">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162010,20 +169321,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2997">
+            <rdf:Description rdf:about="#G_b2724">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009834"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69741"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAK1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10475"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0972" sboTerm="SBO:0000243" fbc:id="G_b0972" fbc:name="G_b0972" fbc:label="G_b0972">
+      <fbc:geneProduct metaid="G_b2720" sboTerm="SBO:0000243" fbc:id="G_b2720" fbc:name="G_b2720" fbc:label="G_b2720">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162031,20 +169342,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0972">
+            <rdf:Description rdf:about="#G_b2720">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003286"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69739"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945579"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008942"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16432"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10479"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2996" sboTerm="SBO:0000243" fbc:id="G_b2996" fbc:name="G_b2996" fbc:label="G_b2996">
+      <fbc:geneProduct metaid="G_b2997" sboTerm="SBO:0000243" fbc:id="G_b2997" fbc:name="G_b2997" fbc:label="G_b2997">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162052,20 +169363,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2996">
+            <rdf:Description rdf:about="#G_b2997">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009832"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAJ8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13006"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0974" sboTerm="SBO:0000243" fbc:id="G_b0974" fbc:name="G_b0974" fbc:label="G_b0974">
+      <fbc:geneProduct metaid="G_b2722" sboTerm="SBO:0000243" fbc:id="G_b2722" fbc:name="G_b2722" fbc:label="G_b2722">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162073,20 +169384,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0974">
+            <rdf:Description rdf:about="#G_b2722">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003290"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAM1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945581"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10477"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2994" sboTerm="SBO:0000243" fbc:id="G_b2994" fbc:name="G_b2994" fbc:label="G_b2994">
+      <fbc:geneProduct metaid="G_b0973" sboTerm="SBO:0000243" fbc:id="G_b0973" fbc:name="G_b0973" fbc:label="G_b0973">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162094,13 +169405,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2994">
+            <rdf:Description rdf:about="#G_b0973">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACE0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945182"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACD8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10469"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162366,27 +169677,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3265" sboTerm="SBO:0000243" fbc:id="G_b3265" fbc:name="G_b3265" fbc:label="G_b3265">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3265">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947706"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10266"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3513" sboTerm="SBO:0000243" fbc:id="G_b3513" fbc:name="G_b3513" fbc:label="G_b3513">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -162437,6 +169727,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3265" sboTerm="SBO:0000243" fbc:id="G_b3265" fbc:name="G_b3265" fbc:label="G_b3265">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3265">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10266"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3161" sboTerm="SBO:0000243" fbc:id="G_b3161" fbc:name="G_b3161" fbc:label="G_b3161">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -162548,7 +169859,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2889" sboTerm="SBO:0000243" fbc:id="G_b2889" fbc:name="G_b2889" fbc:label="G_b2889">
+      <fbc:geneProduct metaid="G_b2299" sboTerm="SBO:0000243" fbc:id="G_b2299" fbc:name="G_b2299" fbc:label="G_b2299">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162556,20 +169867,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2889">
+            <rdf:Description rdf:about="#G_b2299">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009484"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044354"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2299" sboTerm="SBO:0000243" fbc:id="G_b2299" fbc:name="G_b2299" fbc:label="G_b2299">
+      <fbc:geneProduct metaid="G_b2889" sboTerm="SBO:0000243" fbc:id="G_b2889" fbc:name="G_b2889" fbc:label="G_b2889">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162577,11 +169886,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2299">
+            <rdf:Description rdf:about="#G_b2889">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044354"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13072"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162630,7 +169941,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0072" sboTerm="SBO:0000243" fbc:id="G_b0072" fbc:name="G_b0072" fbc:label="G_b0072">
+      <fbc:geneProduct metaid="G_b0071" sboTerm="SBO:0000243" fbc:id="G_b0071" fbc:name="G_b0071" fbc:label="G_b0071">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162638,20 +169949,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0072">
+            <rdf:Description rdf:about="#G_b0071">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945076"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11575"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0071" sboTerm="SBO:0000243" fbc:id="G_b0071" fbc:name="G_b0071" fbc:label="G_b0071">
+      <fbc:geneProduct metaid="G_b0072" sboTerm="SBO:0000243" fbc:id="G_b0072" fbc:name="G_b0072" fbc:label="G_b0072">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162659,13 +169970,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0071">
+            <rdf:Description rdf:about="#G_b0072">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945642"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11576"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162693,7 +170004,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0914" sboTerm="SBO:0000243" fbc:id="G_b0914" fbc:name="G_b0914" fbc:label="G_b0914">
+      <fbc:geneProduct metaid="G_b0448" sboTerm="SBO:0000243" fbc:id="G_b0448" fbc:name="G_b0448" fbc:label="G_b0448">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162701,20 +170012,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0914">
+            <rdf:Description rdf:about="#G_b0448">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WH20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174236"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0448" sboTerm="SBO:0000243" fbc:id="G_b0448" fbc:name="G_b0448" fbc:label="G_b0448">
+      <fbc:geneProduct metaid="G_b0914" sboTerm="SBO:0000243" fbc:id="G_b0914" fbc:name="G_b0914" fbc:label="G_b0914">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162722,18 +170038,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0448">
+            <rdf:Description rdf:about="#G_b0914">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001140"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011527"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WH20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174236"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10613"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162831,7 +170142,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3581" sboTerm="SBO:0000243" fbc:id="G_b3581" fbc:name="G_b3581" fbc:label="G_b3581">
+      <fbc:geneProduct metaid="G_b4196" sboTerm="SBO:0000243" fbc:id="G_b4196" fbc:name="G_b4196" fbc:label="G_b4196">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162839,20 +170150,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3581">
+            <rdf:Description rdf:about="#G_b4196">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011698"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37678"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12496"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4196" sboTerm="SBO:0000243" fbc:id="G_b4196" fbc:name="G_b4196" fbc:label="G_b4196">
+      <fbc:geneProduct metaid="G_b3581" sboTerm="SBO:0000243" fbc:id="G_b3581" fbc:name="G_b3581" fbc:label="G_b3581">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162860,13 +170171,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4196">
+            <rdf:Description rdf:about="#G_b3581">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39304"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948714"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37678"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12285"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162894,6 +170205,34 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0695" sboTerm="SBO:0000243" fbc:id="G_b0695" fbc:name="G_b0695" fbc:label="G_b0695">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4513" sboTerm="SBO:0000243" fbc:id="G_b4513" fbc:name="G_b4513" fbc:label="G_b4513">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4513">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0285034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12126"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0697" sboTerm="SBO:0000243" fbc:id="G_b0697" fbc:name="G_b0697" fbc:label="G_b0697">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -162936,7 +170275,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4513" sboTerm="SBO:0000243" fbc:id="G_b4513" fbc:name="G_b4513" fbc:label="G_b4513">
+      <fbc:geneProduct metaid="G_b1250" sboTerm="SBO:0000243" fbc:id="G_b1250" fbc:name="G_b1250" fbc:label="G_b1250">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162944,27 +170283,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4513">
+            <rdf:Description rdf:about="#G_b1250">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0285034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948946"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11606"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0695" sboTerm="SBO:0000243" fbc:id="G_b0695" fbc:name="G_b0695" fbc:label="G_b0695">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3290" sboTerm="SBO:0000243" fbc:id="G_b3290" fbc:name="G_b3290" fbc:label="G_b3290">
+      <fbc:geneProduct metaid="G_b3849" sboTerm="SBO:0000243" fbc:id="G_b3849" fbc:name="G_b3849" fbc:label="G_b3849">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162972,20 +170304,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3290">
+            <rdf:Description rdf:about="#G_b3849">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010787"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGI8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947788"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFZ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKU4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176597"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3747" sboTerm="SBO:0000243" fbc:id="G_b3747" fbc:name="G_b3747" fbc:label="G_b3747">
+      <fbc:geneProduct metaid="G_b1363" sboTerm="SBO:0000243" fbc:id="G_b1363" fbc:name="G_b1363" fbc:label="G_b1363">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162993,13 +170329,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3747">
+            <rdf:Description rdf:about="#G_b1363">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012251"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P63183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11020"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163027,7 +170363,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3849" sboTerm="SBO:0000243" fbc:id="G_b3849" fbc:name="G_b3849" fbc:label="G_b3849">
+      <fbc:geneProduct metaid="G_b3747" sboTerm="SBO:0000243" fbc:id="G_b3747" fbc:name="G_b3747" fbc:label="G_b3747">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163035,24 +170371,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3849">
+            <rdf:Description rdf:about="#G_b3747">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFZ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948333"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11021"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003445"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004772"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKU4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P63183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11541"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1363" sboTerm="SBO:0000243" fbc:id="G_b1363" fbc:name="G_b1363" fbc:label="G_b1363">
+      <fbc:geneProduct metaid="G_b3290" sboTerm="SBO:0000243" fbc:id="G_b3290" fbc:name="G_b3290" fbc:label="G_b3290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163060,20 +170392,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1363">
+            <rdf:Description rdf:about="#G_b3290">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004567"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGI8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11019"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1250" sboTerm="SBO:0000243" fbc:id="G_b1250" fbc:name="G_b1250" fbc:label="G_b1250">
+      <fbc:geneProduct metaid="G_b2182" sboTerm="SBO:0000243" fbc:id="G_b2182" fbc:name="G_b2182" fbc:label="G_b2182">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1191" sboTerm="SBO:0000243" fbc:id="G_b1191" fbc:name="G_b1191" fbc:label="G_b1191">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163081,13 +170420,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1250">
+            <rdf:Description rdf:about="#G_b1191">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945841"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163137,6 +170474,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0842" sboTerm="SBO:0000243" fbc:id="G_b0842" fbc:name="G_b0842" fbc:label="G_b0842">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0842">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEY8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13696"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0047" sboTerm="SBO:0000243" fbc:id="G_b0047" fbc:name="G_b0047" fbc:label="G_b0047">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -163158,46 +170516,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1191" sboTerm="SBO:0000243" fbc:id="G_b1191" fbc:name="G_b1191" fbc:label="G_b1191">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1191">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0842" sboTerm="SBO:0000243" fbc:id="G_b0842" fbc:name="G_b0842" fbc:label="G_b0842">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0842">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEY8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13696"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3710" sboTerm="SBO:0000243" fbc:id="G_b3710" fbc:name="G_b3710" fbc:label="G_b3710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -163219,13 +170537,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2182" sboTerm="SBO:0000243" fbc:id="G_b2182" fbc:name="G_b2182" fbc:label="G_b2182">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3076" sboTerm="SBO:0000243" fbc:id="G_b3076" fbc:name="G_b3076" fbc:label="G_b3076">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -163307,7 +170618,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3496" sboTerm="SBO:0000243" fbc:id="G_b3496" fbc:name="G_b3496" fbc:label="G_b3496">
+      <fbc:geneProduct metaid="G_b0709" sboTerm="SBO:0000243" fbc:id="G_b0709" fbc:name="G_b0709" fbc:label="G_b0709">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163315,13 +170626,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3496">
+            <rdf:Description rdf:about="#G_b0709">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36837"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948006"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13304"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163349,7 +170660,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0709" sboTerm="SBO:0000243" fbc:id="G_b0709" fbc:name="G_b0709" fbc:label="G_b0709">
+      <fbc:geneProduct metaid="G_b3496" sboTerm="SBO:0000243" fbc:id="G_b3496" fbc:name="G_b3496" fbc:label="G_b3496">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163357,13 +170668,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0709">
+            <rdf:Description rdf:about="#G_b3496">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002420"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75742"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12232"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163433,7 +170744,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0070" sboTerm="SBO:0000243" fbc:id="G_b0070" fbc:name="G_b0070" fbc:label="G_b0070">
+      <fbc:geneProduct metaid="G_b2170" sboTerm="SBO:0000243" fbc:id="G_b2170" fbc:name="G_b2170" fbc:label="G_b2170">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163441,13 +170752,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0070">
+            <rdf:Description rdf:about="#G_b2170">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11754"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946673"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12034"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163461,7 +170772,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2170" sboTerm="SBO:0000243" fbc:id="G_b2170" fbc:name="G_b2170" fbc:label="G_b2170">
+      <fbc:geneProduct metaid="G_b0070" sboTerm="SBO:0000243" fbc:id="G_b0070" fbc:name="G_b0070" fbc:label="G_b0070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163469,13 +170780,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2170">
+            <rdf:Description rdf:about="#G_b0070">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946673"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11754"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163503,7 +170814,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2133" sboTerm="SBO:0000243" fbc:id="G_b2133" fbc:name="G_b2133" fbc:label="G_b2133">
+      <fbc:geneProduct metaid="G_b1380" sboTerm="SBO:0000243" fbc:id="G_b1380" fbc:name="G_b1380" fbc:label="G_b1380">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163511,20 +170822,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2133">
+            <rdf:Description rdf:about="#G_b1380">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06149"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946653"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004619"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13186"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1380" sboTerm="SBO:0000243" fbc:id="G_b1380" fbc:name="G_b1380" fbc:label="G_b1380">
+      <fbc:geneProduct metaid="G_b2133" sboTerm="SBO:0000243" fbc:id="G_b2133" fbc:name="G_b2133" fbc:label="G_b2133">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163532,13 +170843,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1380">
+            <rdf:Description rdf:about="#G_b2133">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004619"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52643"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946315"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10231"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163717,7 +171028,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0186" sboTerm="SBO:0000243" fbc:id="G_b0186" fbc:name="G_b0186" fbc:label="G_b0186">
+      <fbc:geneProduct metaid="G_b4131" sboTerm="SBO:0000243" fbc:id="G_b4131" fbc:name="G_b4131" fbc:label="G_b4131">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163725,20 +171036,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0186">
+            <rdf:Description rdf:about="#G_b4131">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944887"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9H3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10131"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4131" sboTerm="SBO:0000243" fbc:id="G_b4131" fbc:name="G_b4131" fbc:label="G_b4131">
+      <fbc:geneProduct metaid="G_b0186" sboTerm="SBO:0000243" fbc:id="G_b0186" fbc:name="G_b0186" fbc:label="G_b0186">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163746,13 +171057,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4131">
+            <rdf:Description rdf:about="#G_b0186">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013526"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9H3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948643"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13219"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163843,7 +171154,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0307" sboTerm="SBO:0000243" fbc:id="G_b0307" fbc:name="G_b0307" fbc:label="G_b0307">
+      <fbc:geneProduct metaid="G_b0306" sboTerm="SBO:0000243" fbc:id="G_b0306" fbc:name="G_b0306" fbc:label="G_b0306">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163851,20 +171162,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0307">
+            <rdf:Description rdf:about="#G_b0306">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001060"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944980"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13582"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0308" sboTerm="SBO:0000243" fbc:id="G_b0308" fbc:name="G_b0308" fbc:label="G_b0308">
+      <fbc:geneProduct metaid="G_b3605" sboTerm="SBO:0000243" fbc:id="G_b3605" fbc:name="G_b3605" fbc:label="G_b3605">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163872,20 +171183,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0308">
+            <rdf:Description rdf:about="#G_b3605">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11963"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0306" sboTerm="SBO:0000243" fbc:id="G_b0306" fbc:name="G_b0306" fbc:label="G_b0306">
+      <fbc:geneProduct metaid="G_b0308" sboTerm="SBO:0000243" fbc:id="G_b0308" fbc:name="G_b0308" fbc:label="G_b0308">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163893,20 +171204,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0306">
+            <rdf:Description rdf:about="#G_b0308">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77252"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948438"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13584"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3605" sboTerm="SBO:0000243" fbc:id="G_b3605" fbc:name="G_b3605" fbc:label="G_b3605">
+      <fbc:geneProduct metaid="G_b0307" sboTerm="SBO:0000243" fbc:id="G_b0307" fbc:name="G_b0307" fbc:label="G_b0307">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163914,13 +171225,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3605">
+            <rdf:Description rdf:about="#G_b0307">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33232"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13583"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163948,7 +171259,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4014" sboTerm="SBO:0000243" fbc:id="G_b4014" fbc:name="G_b4014" fbc:label="G_b4014">
+      <fbc:geneProduct metaid="G_b3229" sboTerm="SBO:0000243" fbc:id="G_b3229" fbc:name="G_b3229" fbc:label="G_b3229">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163956,13 +171267,38 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4014">
+            <rdf:Description rdf:about="#G_b3229">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948512"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100758427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041608"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2301" sboTerm="SBO:0000243" fbc:id="G_b2301" fbc:name="G_b2301" fbc:label="G_b2301">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2301">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/603758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hprd/04785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS9858.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS9859.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS9860.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100764455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/14874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS26071.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163990,6 +171326,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4014" sboTerm="SBO:0000243" fbc:id="G_b4014" fbc:name="G_b4014" fbc:label="G_b4014">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4014">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10023"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0770" sboTerm="SBO:0000243" fbc:id="G_b0770" fbc:name="G_b0770" fbc:label="G_b0770">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164201,6 +171558,48 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0084" sboTerm="SBO:0000243" fbc:id="G_b0084" fbc:name="G_b0084" fbc:label="G_b0084">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0084">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD68"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10341"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0149" sboTerm="SBO:0000243" fbc:id="G_b0149" fbc:name="G_b0149" fbc:label="G_b0149">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0149">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000516"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10605"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0635" sboTerm="SBO:0000243" fbc:id="G_b0635" fbc:name="G_b0635" fbc:label="G_b0635">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164222,48 +171621,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0084" sboTerm="SBO:0000243" fbc:id="G_b0084" fbc:name="G_b0084" fbc:label="G_b0084">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0084">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000309"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD68"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10341"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0149" sboTerm="SBO:0000243" fbc:id="G_b0149" fbc:name="G_b0149" fbc:label="G_b0149">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0149">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000516"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10605"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3396" sboTerm="SBO:0000243" fbc:id="G_b3396" fbc:name="G_b3396" fbc:label="G_b3396">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164285,7 +171642,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1678" sboTerm="SBO:0000243" fbc:id="G_b1678" fbc:name="G_b1678" fbc:label="G_b1678">
+      <fbc:geneProduct metaid="G_b0925" sboTerm="SBO:0000243" fbc:id="G_b0925" fbc:name="G_b0925" fbc:label="G_b0925">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164293,20 +171650,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1678">
+            <rdf:Description rdf:about="#G_b0925">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76193"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946174"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11253"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0925" sboTerm="SBO:0000243" fbc:id="G_b0925" fbc:name="G_b0925" fbc:label="G_b0925">
+      <fbc:geneProduct metaid="G_b1678" sboTerm="SBO:0000243" fbc:id="G_b1678" fbc:name="G_b1678" fbc:label="G_b1678">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164314,20 +171671,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0925">
+            <rdf:Description rdf:about="#G_b1678">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14015"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0632" sboTerm="SBO:0000243" fbc:id="G_b0632" fbc:name="G_b0632" fbc:label="G_b0632">
+      <fbc:geneProduct metaid="G_b3182" sboTerm="SBO:0000243" fbc:id="G_b3182" fbc:name="G_b3182" fbc:label="G_b3182">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164335,13 +171692,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0632">
+            <rdf:Description rdf:about="#G_b3182">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002168"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEB2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945222"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24228"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947693"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10202"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164369,7 +171726,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3182" sboTerm="SBO:0000243" fbc:id="G_b3182" fbc:name="G_b3182" fbc:label="G_b3182">
+      <fbc:geneProduct metaid="G_b0632" sboTerm="SBO:0000243" fbc:id="G_b0632" fbc:name="G_b0632" fbc:label="G_b0632">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164377,13 +171734,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3182">
+            <rdf:Description rdf:about="#G_b0632">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010458"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24228"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947693"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEB2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10201"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164453,7 +171810,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1856" sboTerm="SBO:0000243" fbc:id="G_b1856" fbc:name="G_b1856" fbc:label="G_b1856">
+      <fbc:geneProduct metaid="G_b2328" sboTerm="SBO:0000243" fbc:id="G_b2328" fbc:name="G_b2328" fbc:label="G_b2328">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164461,20 +171818,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1856">
+            <rdf:Description rdf:about="#G_b2328">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFS9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946376"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C0T5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10580"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2134" sboTerm="SBO:0000243" fbc:id="G_b2134" fbc:name="G_b2134" fbc:label="G_b2134">
+      <fbc:geneProduct metaid="G_b1856" sboTerm="SBO:0000243" fbc:id="G_b1856" fbc:name="G_b1856" fbc:label="G_b1856">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164482,13 +171839,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2134">
+            <rdf:Description rdf:about="#G_b1856">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007050"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFS9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10013"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164516,7 +171873,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2328" sboTerm="SBO:0000243" fbc:id="G_b2328" fbc:name="G_b2328" fbc:label="G_b2328">
+      <fbc:geneProduct metaid="G_b2134" sboTerm="SBO:0000243" fbc:id="G_b2134" fbc:name="G_b2134" fbc:label="G_b2134">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164524,13 +171881,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2328">
+            <rdf:Description rdf:about="#G_b2134">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007691"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C0T5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946812"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12015"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164714,6 +172071,35 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0127" sboTerm="SBO:0000243" fbc:id="G_b0127" fbc:name="G_b0127" fbc:label="G_b0127">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0127">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100761226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18C09"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS18187.1"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3463" sboTerm="SBO:0000243" fbc:id="G_b3463" fbc:name="G_b3463" fbc:label="G_b3463">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164749,7 +172135,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0127" sboTerm="SBO:0000243" fbc:id="G_b0127" fbc:name="G_b0127" fbc:label="G_b0127">
+      <fbc:geneProduct metaid="G_b0198" sboTerm="SBO:0000243" fbc:id="G_b0198" fbc:name="G_b0198" fbc:label="G_b0198">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164757,21 +172143,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0127">
+            <rdf:Description rdf:about="#G_b0198">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100761226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018449"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR026253"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18C09"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888168"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11303"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS18187.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHX2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173913"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164820,30 +172201,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0198" sboTerm="SBO:0000243" fbc:id="G_b0198" fbc:name="G_b0198" fbc:label="G_b0198">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0198">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000668"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944894"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11737"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHX2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173913"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3376" sboTerm="SBO:0000243" fbc:id="G_b3376" fbc:name="G_b3376" fbc:label="G_b3376">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164905,27 +172262,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3829" sboTerm="SBO:0000243" fbc:id="G_b3829" fbc:name="G_b3829" fbc:label="G_b3829">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3829">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012520"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25665"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948323"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10584"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4019" sboTerm="SBO:0000243" fbc:id="G_b4019" fbc:name="G_b4019" fbc:label="G_b4019">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164947,7 +172283,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3551" sboTerm="SBO:0000243" fbc:id="G_b3551" fbc:name="G_b3551" fbc:label="G_b3551">
+      <fbc:geneProduct metaid="G_b3829" sboTerm="SBO:0000243" fbc:id="G_b3829" fbc:name="G_b3829" fbc:label="G_b3829">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164955,20 +172291,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3551">
+            <rdf:Description rdf:about="#G_b3829">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011597"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P20099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10584"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4219" sboTerm="SBO:0000243" fbc:id="G_b4219" fbc:name="G_b4219" fbc:label="G_b4219">
+      <fbc:geneProduct metaid="G_b2582" sboTerm="SBO:0000243" fbc:id="G_b2582" fbc:name="G_b2582" fbc:label="G_b2582">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164976,20 +172312,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4219">
+            <rdf:Description rdf:about="#G_b2582">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948734"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGG4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11887"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2582" sboTerm="SBO:0000243" fbc:id="G_b2582" fbc:name="G_b2582" fbc:label="G_b2582">
+      <fbc:geneProduct metaid="G_b4219" sboTerm="SBO:0000243" fbc:id="G_b4219" fbc:name="G_b4219" fbc:label="G_b4219">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164997,13 +172333,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2582">
+            <rdf:Description rdf:about="#G_b4219">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGG4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11433"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165031,6 +172367,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3551" sboTerm="SBO:0000243" fbc:id="G_b3551" fbc:name="G_b3551" fbc:label="G_b3551">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3551">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P20099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10124"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1832" sboTerm="SBO:0000243" fbc:id="G_b1832" fbc:name="G_b1832" fbc:label="G_b1832">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -165122,6 +172479,27 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0819" sboTerm="SBO:0000243" fbc:id="G_b0819" fbc:name="G_b0819" fbc:label="G_b0819">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0819">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAX8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945441"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13324"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1990" sboTerm="SBO:0000243" fbc:id="G_b1990" fbc:name="G_b1990" fbc:label="G_b1990">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -165164,35 +172542,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0819" sboTerm="SBO:0000243" fbc:id="G_b0819" fbc:name="G_b0819" fbc:label="G_b0819">
+      <fbc:geneProduct metaid="G_b2494" sboTerm="SBO:0000243" fbc:id="G_b2494" fbc:name="G_b2494" fbc:label="G_b2494">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0819">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002797"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAX8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945441"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13324"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2494" sboTerm="SBO:0000243" fbc:id="G_b2494" fbc:name="G_b2494" fbc:label="G_b2494">
+      <fbc:geneProduct metaid="G_b3613" sboTerm="SBO:0000243" fbc:id="G_b3613" fbc:name="G_b3613" fbc:label="G_b3613">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3613" sboTerm="SBO:0000243" fbc:id="G_b3613" fbc:name="G_b3613" fbc:label="G_b3613">
+      <fbc:geneProduct metaid="G_b2865" sboTerm="SBO:0000243" fbc:id="G_b2865" fbc:name="G_b2865" fbc:label="G_b2865">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165218,7 +172582,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2865" sboTerm="SBO:0000243" fbc:id="G_b2865" fbc:name="G_b2865" fbc:label="G_b2865">
+      <fbc:geneProduct metaid="G_b1766" sboTerm="SBO:0000243" fbc:id="G_b1766" fbc:name="G_b1766" fbc:label="G_b1766">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165232,13 +172596,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1766" sboTerm="SBO:0000243" fbc:id="G_b1766" fbc:name="G_b1766" fbc:label="G_b1766">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0403" sboTerm="SBO:0000243" fbc:id="G_b0403" fbc:name="G_b0403" fbc:label="G_b0403">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -165260,7 +172617,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1097" sboTerm="SBO:0000243" fbc:id="G_b1097" fbc:name="G_b1097" fbc:label="G_b1097">
+      <fbc:geneProduct metaid="G_b2701" sboTerm="SBO:0000243" fbc:id="G_b2701" fbc:name="G_b2701" fbc:label="G_b2701">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165268,20 +172625,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1097">
+            <rdf:Description rdf:about="#G_b2701">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003712"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P41052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12699"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2813" sboTerm="SBO:0000243" fbc:id="G_b2813" fbc:name="G_b2813" fbc:label="G_b2813">
+      <fbc:geneProduct metaid="G_b2963" sboTerm="SBO:0000243" fbc:id="G_b2963" fbc:name="G_b2963" fbc:label="G_b2963">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165289,20 +172646,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2813">
+            <rdf:Description rdf:about="#G_b2963">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009228"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A935"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944964"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009725"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12986"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1193" sboTerm="SBO:0000243" fbc:id="G_b1193" fbc:name="G_b1193" fbc:label="G_b1193">
+      <fbc:geneProduct metaid="G_b4392" sboTerm="SBO:0000243" fbc:id="G_b4392" fbc:name="G_b4392" fbc:label="G_b4392">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165310,20 +172667,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1193">
+            <rdf:Description rdf:about="#G_b4392">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004006"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C960"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10950"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2558" sboTerm="SBO:0000243" fbc:id="G_b2558" fbc:name="G_b2558" fbc:label="G_b2558">
+      <fbc:geneProduct metaid="G_b2813" sboTerm="SBO:0000243" fbc:id="G_b2813" fbc:name="G_b2813" fbc:label="G_b2813">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165331,20 +172688,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2558">
+            <rdf:Description rdf:about="#G_b2813">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009228"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944964"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13085"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4392" sboTerm="SBO:0000243" fbc:id="G_b4392" fbc:name="G_b4392" fbc:label="G_b4392">
+      <fbc:geneProduct metaid="G_b2558" sboTerm="SBO:0000243" fbc:id="G_b2558" fbc:name="G_b2558" fbc:label="G_b2558">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165352,20 +172709,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4392">
+            <rdf:Description rdf:about="#G_b2558">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014404"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11373"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2963" sboTerm="SBO:0000243" fbc:id="G_b2963" fbc:name="G_b2963" fbc:label="G_b2963">
+      <fbc:geneProduct metaid="G_b0211" sboTerm="SBO:0000243" fbc:id="G_b0211" fbc:name="G_b0211" fbc:label="G_b0211">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165373,20 +172730,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2963">
+            <rdf:Description rdf:about="#G_b0211">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009725"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945428"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEZ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10246"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2701" sboTerm="SBO:0000243" fbc:id="G_b2701" fbc:name="G_b2701" fbc:label="G_b2701">
+      <fbc:geneProduct metaid="G_b1193" sboTerm="SBO:0000243" fbc:id="G_b1193" fbc:name="G_b1193" fbc:label="G_b1193">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165394,20 +172751,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2701">
+            <rdf:Description rdf:about="#G_b1193">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008885"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P41052"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13897"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0211" sboTerm="SBO:0000243" fbc:id="G_b0211" fbc:name="G_b0211" fbc:label="G_b0211">
+      <fbc:geneProduct metaid="G_b1097" sboTerm="SBO:0000243" fbc:id="G_b1097" fbc:name="G_b1097" fbc:label="G_b1097">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165415,13 +172772,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0211">
+            <rdf:Description rdf:about="#G_b1097">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEZ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003712"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11494"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165533,7 +172890,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2703" sboTerm="SBO:0000243" fbc:id="G_b2703" fbc:name="G_b2703" fbc:label="G_b2703">
+      <fbc:geneProduct metaid="G_b3599" sboTerm="SBO:0000243" fbc:id="G_b3599" fbc:name="G_b3599" fbc:label="G_b3599">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165541,13 +172898,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2703">
+            <rdf:Description rdf:about="#G_b3599">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008892"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P56580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948933"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10615"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165596,7 +172953,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2702" sboTerm="SBO:0000243" fbc:id="G_b2702" fbc:name="G_b2702" fbc:label="G_b2702">
+      <fbc:geneProduct metaid="G_b2934" sboTerm="SBO:0000243" fbc:id="G_b2934" fbc:name="G_b2934" fbc:label="G_b2934">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165604,20 +172961,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2702">
+            <rdf:Description rdf:about="#G_b2934">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P56579"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947575"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009623"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69824"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11791"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2934" sboTerm="SBO:0000243" fbc:id="G_b2934" fbc:name="G_b2934" fbc:label="G_b2934">
+      <fbc:geneProduct metaid="G_b2702" sboTerm="SBO:0000243" fbc:id="G_b2702" fbc:name="G_b2702" fbc:label="G_b2702">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165625,20 +172982,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2934">
+            <rdf:Description rdf:about="#G_b2702">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009623"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69824"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P56579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10969"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3599" sboTerm="SBO:0000243" fbc:id="G_b3599" fbc:name="G_b3599" fbc:label="G_b3599">
+      <fbc:geneProduct metaid="G_b2703" sboTerm="SBO:0000243" fbc:id="G_b2703" fbc:name="G_b2703" fbc:label="G_b2703">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165646,13 +173003,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3599">
+            <rdf:Description rdf:about="#G_b2703">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00550"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948118"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P56580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14373"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165730,6 +173087,27 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0763" sboTerm="SBO:0000243" fbc:id="G_b0763" fbc:name="G_b0763" fbc:label="G_b0763">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0763">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12427"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2422" sboTerm="SBO:0000243" fbc:id="G_b2422" fbc:name="G_b2422" fbc:label="G_b2422">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -165751,7 +173129,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2423" sboTerm="SBO:0000243" fbc:id="G_b2423" fbc:name="G_b2423" fbc:label="G_b2423">
+      <fbc:geneProduct metaid="G_b0764" sboTerm="SBO:0000243" fbc:id="G_b0764" fbc:name="G_b0764" fbc:label="G_b0764">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165759,20 +173137,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2423">
+            <rdf:Description rdf:about="#G_b0764">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEB0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847743"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF01"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10002"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2424" sboTerm="SBO:0000243" fbc:id="G_b2424" fbc:name="G_b2424" fbc:label="G_b2424">
+      <fbc:geneProduct metaid="G_b0765" sboTerm="SBO:0000243" fbc:id="G_b0765" fbc:name="G_b0765" fbc:label="G_b0765">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165780,13 +173158,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2424">
+            <rdf:Description rdf:about="#G_b0765">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10152"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165814,28 +173192,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3917" sboTerm="SBO:0000243" fbc:id="G_b3917" fbc:name="G_b3917" fbc:label="G_b3917">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3917">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG78"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948411"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10929"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0764" sboTerm="SBO:0000243" fbc:id="G_b0764" fbc:name="G_b0764" fbc:label="G_b0764">
+      <fbc:geneProduct metaid="G_b2423" sboTerm="SBO:0000243" fbc:id="G_b2423" fbc:name="G_b2423" fbc:label="G_b2423">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165843,20 +173200,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0764">
+            <rdf:Description rdf:about="#G_b2423">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF01"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945361"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEB0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10198"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0763" sboTerm="SBO:0000243" fbc:id="G_b0763" fbc:name="G_b0763" fbc:label="G_b0763">
+      <fbc:geneProduct metaid="G_b3917" sboTerm="SBO:0000243" fbc:id="G_b3917" fbc:name="G_b3917" fbc:label="G_b3917">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165864,20 +173221,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0763">
+            <rdf:Description rdf:about="#G_b3917">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002601"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37329"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945364"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG78"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948411"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10929"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0765" sboTerm="SBO:0000243" fbc:id="G_b0765" fbc:name="G_b0765" fbc:label="G_b0765">
+      <fbc:geneProduct metaid="G_b2424" sboTerm="SBO:0000243" fbc:id="G_b2424" fbc:name="G_b2424" fbc:label="G_b2424">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165885,13 +173242,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0765">
+            <rdf:Description rdf:about="#G_b2424">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10197"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165954,7 +173311,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3208" sboTerm="SBO:0000243" fbc:id="G_b3208" fbc:name="G_b3208" fbc:label="G_b3208">
+      <fbc:geneProduct metaid="G_b1069" sboTerm="SBO:0000243" fbc:id="G_b1069" fbc:name="G_b1069" fbc:label="G_b1069">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165962,20 +173319,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3208">
+            <rdf:Description rdf:about="#G_b1069">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947728"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003630"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF16"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13880"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0634" sboTerm="SBO:0000243" fbc:id="G_b0634" fbc:name="G_b0634" fbc:label="G_b0634">
+      <fbc:geneProduct metaid="G_b0089" sboTerm="SBO:0000243" fbc:id="G_b0089" fbc:name="G_b0089" fbc:label="G_b0089">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165983,18 +173340,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0634">
+            <rdf:Description rdf:about="#G_b0089">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABG4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10344"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1069" sboTerm="SBO:0000243" fbc:id="G_b1069" fbc:name="G_b1069" fbc:label="G_b1069">
+      <fbc:geneProduct metaid="G_b3208" sboTerm="SBO:0000243" fbc:id="G_b3208" fbc:name="G_b3208" fbc:label="G_b3208">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166002,20 +173361,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1069">
+            <rdf:Description rdf:about="#G_b3208">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003630"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF16"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12808"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0089" sboTerm="SBO:0000243" fbc:id="G_b0089" fbc:name="G_b0089" fbc:label="G_b0089">
+      <fbc:geneProduct metaid="G_b0634" sboTerm="SBO:0000243" fbc:id="G_b0634" fbc:name="G_b0634" fbc:label="G_b0634">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166023,13 +173382,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0089">
+            <rdf:Description rdf:about="#G_b0634">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000320"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABG4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041667"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166117,30 +173474,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0873" sboTerm="SBO:0000243" fbc:id="G_b0873" fbc:name="G_b0873" fbc:label="G_b0873">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0873">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004137"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011254"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016100"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185V5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185V5"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2411" sboTerm="SBO:0000243" fbc:id="G_b2411" fbc:name="G_b2411" fbc:label="G_b2411">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166190,48 +173523,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3713" sboTerm="SBO:0000243" fbc:id="G_b3713" fbc:name="G_b3713" fbc:label="G_b3713">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3713">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012146"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGE6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11723"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1004" sboTerm="SBO:0000243" fbc:id="G_b1004" fbc:name="G_b1004" fbc:label="G_b1004">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1004">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8G6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11540"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1109" sboTerm="SBO:0000243" fbc:id="G_b1109" fbc:name="G_b1109" fbc:label="G_b1109">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166274,7 +173565,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2278" sboTerm="SBO:0000243" fbc:id="G_b2278" fbc:name="G_b2278" fbc:label="G_b2278">
+      <fbc:geneProduct metaid="G_b3713" sboTerm="SBO:0000243" fbc:id="G_b3713" fbc:name="G_b3713" fbc:label="G_b3713">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166282,20 +173573,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2278">
+            <rdf:Description rdf:about="#G_b3713">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007532"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33607"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945540"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGE6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11723"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2285" sboTerm="SBO:0000243" fbc:id="G_b2285" fbc:name="G_b2285" fbc:label="G_b2285">
+      <fbc:geneProduct metaid="G_b1004" sboTerm="SBO:0000243" fbc:id="G_b1004" fbc:name="G_b1004" fbc:label="G_b1004">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166303,20 +173594,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2285">
+            <rdf:Description rdf:about="#G_b1004">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFD1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8G6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11540"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2288" sboTerm="SBO:0000243" fbc:id="G_b2288" fbc:name="G_b2288" fbc:label="G_b2288">
+      <fbc:geneProduct metaid="G_b2277" sboTerm="SBO:0000243" fbc:id="G_b2277" fbc:name="G_b2277" fbc:label="G_b2277">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166324,20 +173615,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2288">
+            <rdf:Description rdf:about="#G_b2277">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11773"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2280" sboTerm="SBO:0000243" fbc:id="G_b2280" fbc:name="G_b2280" fbc:label="G_b2280">
+      <fbc:geneProduct metaid="G_b2278" sboTerm="SBO:0000243" fbc:id="G_b2278" fbc:name="G_b2278" fbc:label="G_b2278">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166345,13 +173636,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2280">
+            <rdf:Description rdf:about="#G_b2278">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946756"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12092"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166379,34 +173670,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2286" sboTerm="SBO:0000243" fbc:id="G_b2286" fbc:name="G_b2286" fbc:label="G_b2286">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2286">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33599"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001268"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010218"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ92"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175384"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2276" sboTerm="SBO:0000243" fbc:id="G_b2276" fbc:name="G_b2276" fbc:label="G_b2276">
+      <fbc:geneProduct metaid="G_b2284" sboTerm="SBO:0000243" fbc:id="G_b2284" fbc:name="G_b2284" fbc:label="G_b2284">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166414,13 +173678,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2276">
+            <rdf:Description rdf:about="#G_b2284">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007526"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFF0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945136"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ91"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175382"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166452,7 +173721,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2279" sboTerm="SBO:0000243" fbc:id="G_b2279" fbc:name="G_b2279" fbc:label="G_b2279">
+      <fbc:geneProduct metaid="G_b2280" sboTerm="SBO:0000243" fbc:id="G_b2280" fbc:name="G_b2280" fbc:label="G_b2280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166460,25 +173729,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2279">
+            <rdf:Description rdf:about="#G_b2280">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007534"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12091"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003215"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ87"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12090"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2277" sboTerm="SBO:0000243" fbc:id="G_b2277" fbc:name="G_b2277" fbc:label="G_b2277">
+      <fbc:geneProduct metaid="G_b2285" sboTerm="SBO:0000243" fbc:id="G_b2285" fbc:name="G_b2285" fbc:label="G_b2285">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166486,20 +173750,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2277">
+            <rdf:Description rdf:about="#G_b2285">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007529"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFD1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12086"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2281" sboTerm="SBO:0000243" fbc:id="G_b2281" fbc:name="G_b2281" fbc:label="G_b2281">
+      <fbc:geneProduct metaid="G_b2286" sboTerm="SBO:0000243" fbc:id="G_b2286" fbc:name="G_b2286" fbc:label="G_b2286">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166507,18 +173771,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2281">
+            <rdf:Description rdf:about="#G_b2286">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007539"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFD6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946757"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ89"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ92"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175384"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166549,7 +173814,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2284" sboTerm="SBO:0000243" fbc:id="G_b2284" fbc:name="G_b2284" fbc:label="G_b2284">
+      <fbc:geneProduct metaid="G_b2279" sboTerm="SBO:0000243" fbc:id="G_b2279" fbc:name="G_b2279" fbc:label="G_b2279">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166557,25 +173822,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2284">
+            <rdf:Description rdf:about="#G_b2279">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31979"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11774"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001949"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ91"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001133"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ87"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175377"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0901" sboTerm="SBO:0000243" fbc:id="G_b0901" fbc:name="G_b0901" fbc:label="G_b0901">
+      <fbc:geneProduct metaid="G_b2288" sboTerm="SBO:0000243" fbc:id="G_b2288" fbc:name="G_b2288" fbc:label="G_b2288">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166583,25 +173848,46 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0901">
+            <rdf:Description rdf:about="#G_b2288">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12082"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1632" sboTerm="SBO:0000243" fbc:id="G_b1632" fbc:name="G_b1632" fbc:label="G_b1632">
+      <fbc:geneProduct metaid="G_b2281" sboTerm="SBO:0000243" fbc:id="G_b2281" fbc:name="G_b2281" fbc:label="G_b2281">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2281">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFD6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ89"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175379"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0605" sboTerm="SBO:0000243" fbc:id="G_b0605" fbc:name="G_b0605" fbc:label="G_b0605">
+      <fbc:geneProduct metaid="G_b2276" sboTerm="SBO:0000243" fbc:id="G_b2276" fbc:name="G_b2276" fbc:label="G_b2276">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166609,19 +173895,45 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0605">
+            <rdf:Description rdf:about="#G_b2276">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE08"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFF0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12093"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0901" sboTerm="SBO:0000243" fbc:id="G_b0901" fbc:name="G_b0901" fbc:label="G_b0901">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0901">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1632" sboTerm="SBO:0000243" fbc:id="G_b1632" fbc:name="G_b1632" fbc:label="G_b1632">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0606" sboTerm="SBO:0000243" fbc:id="G_b0606" fbc:name="G_b0606" fbc:label="G_b0606">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166643,6 +173955,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0605" sboTerm="SBO:0000243" fbc:id="G_b0605" fbc:name="G_b0605" fbc:label="G_b0605">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0605">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE08"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11384"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b4167" sboTerm="SBO:0000243" fbc:id="G_b4167" fbc:name="G_b4167" fbc:label="G_b4167">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166685,7 +174018,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3028" sboTerm="SBO:0000243" fbc:id="G_b3028" fbc:name="G_b3028" fbc:label="G_b3028">
+      <fbc:geneProduct metaid="G_b4051" sboTerm="SBO:0000243" fbc:id="G_b4051" fbc:name="G_b4051" fbc:label="G_b4051">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166693,20 +174026,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3028">
+            <rdf:Description rdf:about="#G_b4051">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009946"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEY5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947512"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4051" sboTerm="SBO:0000243" fbc:id="G_b4051" fbc:name="G_b4051" fbc:label="G_b4051">
+      <fbc:geneProduct metaid="G_b3028" sboTerm="SBO:0000243" fbc:id="G_b3028" fbc:name="G_b3028" fbc:label="G_b3028">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166714,11 +174045,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4051">
+            <rdf:Description rdf:about="#G_b3028">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEY5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12656"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166746,7 +174079,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1603" sboTerm="SBO:0000243" fbc:id="G_b1603" fbc:name="G_b1603" fbc:label="G_b1603">
+      <fbc:geneProduct metaid="G_b3962" sboTerm="SBO:0000243" fbc:id="G_b3962" fbc:name="G_b3962" fbc:label="G_b3962">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166754,13 +174087,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1603">
+            <rdf:Description rdf:about="#G_b3962">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005354"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946628"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012975"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11428"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166788,7 +174121,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3962" sboTerm="SBO:0000243" fbc:id="G_b3962" fbc:name="G_b3962" fbc:label="G_b3962">
+      <fbc:geneProduct metaid="G_b1603" sboTerm="SBO:0000243" fbc:id="G_b1603" fbc:name="G_b1603" fbc:label="G_b1603">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166796,13 +174129,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3962">
+            <rdf:Description rdf:about="#G_b1603">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012975"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948461"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10744"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166936,7 +174269,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2710" sboTerm="SBO:0000243" fbc:id="G_b2710" fbc:name="G_b2710" fbc:label="G_b2710">
+      <fbc:geneProduct metaid="G_b2711" sboTerm="SBO:0000243" fbc:id="G_b2711" fbc:name="G_b2711" fbc:label="G_b2711">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166944,20 +174277,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2710">
+            <rdf:Description rdf:about="#G_b2711">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948979"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12450"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2711" sboTerm="SBO:0000243" fbc:id="G_b2711" fbc:name="G_b2711" fbc:label="G_b2711">
+      <fbc:geneProduct metaid="G_b2710" sboTerm="SBO:0000243" fbc:id="G_b2710" fbc:name="G_b2710" fbc:label="G_b2710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166965,13 +174298,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2711">
+            <rdf:Description rdf:about="#G_b2710">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37596"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947088"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q46877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12963"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166999,7 +174332,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3477" sboTerm="SBO:0000243" fbc:id="G_b3477" fbc:name="G_b3477" fbc:label="G_b3477">
+      <fbc:geneProduct metaid="G_b3478" sboTerm="SBO:0000243" fbc:id="G_b3478" fbc:name="G_b3478" fbc:label="G_b3478">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167007,20 +174340,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3477">
+            <rdf:Description rdf:about="#G_b3478">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011356"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFA9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12077"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3478" sboTerm="SBO:0000243" fbc:id="G_b3478" fbc:name="G_b3478" fbc:label="G_b3478">
+      <fbc:geneProduct metaid="G_b3477" sboTerm="SBO:0000243" fbc:id="G_b3477" fbc:name="G_b3477" fbc:label="G_b3477">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167028,20 +174361,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3478">
+            <rdf:Description rdf:about="#G_b3477">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011358"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFA9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12076"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3480" sboTerm="SBO:0000243" fbc:id="G_b3480" fbc:name="G_b3480" fbc:label="G_b3480">
+      <fbc:geneProduct metaid="G_b3479" sboTerm="SBO:0000243" fbc:id="G_b3479" fbc:name="G_b3479" fbc:label="G_b3479">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167049,20 +174382,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3480">
+            <rdf:Description rdf:about="#G_b3479">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33594"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011360"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12078"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3479" sboTerm="SBO:0000243" fbc:id="G_b3479" fbc:name="G_b3479" fbc:label="G_b3479">
+      <fbc:geneProduct metaid="G_b3480" sboTerm="SBO:0000243" fbc:id="G_b3480" fbc:name="G_b3480" fbc:label="G_b3480">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167070,13 +174403,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3479">
+            <rdf:Description rdf:about="#G_b3480">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011360"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947989"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12079"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167272,7 +174605,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2204" sboTerm="SBO:0000243" fbc:id="G_b2204" fbc:name="G_b2204" fbc:label="G_b2204">
+      <fbc:geneProduct metaid="G_b2206" sboTerm="SBO:0000243" fbc:id="G_b2206" fbc:name="G_b2206" fbc:label="G_b2206">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167280,13 +174613,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2204">
+            <rdf:Description rdf:about="#G_b2206">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33934"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945984"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12067"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167314,6 +174647,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2202" sboTerm="SBO:0000243" fbc:id="G_b2202" fbc:name="G_b2202" fbc:label="G_b2202">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2202">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12060"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0992" sboTerm="SBO:0000243" fbc:id="G_b0992" fbc:name="G_b0992" fbc:label="G_b0992">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167321,6 +174675,27 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2204" sboTerm="SBO:0000243" fbc:id="G_b2204" fbc:name="G_b2204" fbc:label="G_b2204">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2204">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33934"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945984"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12062"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2205" sboTerm="SBO:0000243" fbc:id="G_b2205" fbc:name="G_b2205" fbc:label="G_b2205">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167342,7 +174717,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2206" sboTerm="SBO:0000243" fbc:id="G_b2206" fbc:name="G_b2206" fbc:label="G_b2206">
+      <fbc:geneProduct metaid="G_b1465" sboTerm="SBO:0000243" fbc:id="G_b1465" fbc:name="G_b1465" fbc:label="G_b1465">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167350,20 +174725,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2206">
+            <rdf:Description rdf:about="#G_b1465">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007289"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF32"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10644"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2202" sboTerm="SBO:0000243" fbc:id="G_b2202" fbc:name="G_b2202" fbc:label="G_b2202">
+      <fbc:geneProduct metaid="G_b1225" sboTerm="SBO:0000243" fbc:id="G_b1225" fbc:name="G_b1225" fbc:label="G_b1225">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167371,20 +174746,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2202">
+            <rdf:Description rdf:about="#G_b1225">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007281"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946706"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10639"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1466" sboTerm="SBO:0000243" fbc:id="G_b1466" fbc:name="G_b1466" fbc:label="G_b1466">
+      <fbc:geneProduct metaid="G_b1227" sboTerm="SBO:0000243" fbc:id="G_b1227" fbc:name="G_b1227" fbc:label="G_b1227">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167392,20 +174767,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1466">
+            <rdf:Description rdf:about="#G_b1227">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004892"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11350"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10640"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1225" sboTerm="SBO:0000243" fbc:id="G_b1225" fbc:name="G_b1225" fbc:label="G_b1225">
+      <fbc:geneProduct metaid="G_b1466" sboTerm="SBO:0000243" fbc:id="G_b1466" fbc:name="G_b1466" fbc:label="G_b1466">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167413,20 +174788,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1225">
+            <rdf:Description rdf:about="#G_b1466">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945780"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10645"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1224" sboTerm="SBO:0000243" fbc:id="G_b1224" fbc:name="G_b1224" fbc:label="G_b1224">
+      <fbc:geneProduct metaid="G_b1467" sboTerm="SBO:0000243" fbc:id="G_b1467" fbc:name="G_b1467" fbc:label="G_b1467">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167434,20 +174809,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1224">
+            <rdf:Description rdf:about="#G_b1467">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09152"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945782"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10647"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1467" sboTerm="SBO:0000243" fbc:id="G_b1467" fbc:name="G_b1467" fbc:label="G_b1467">
+      <fbc:geneProduct metaid="G_b1224" sboTerm="SBO:0000243" fbc:id="G_b1224" fbc:name="G_b1224" fbc:label="G_b1224">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167455,13 +174830,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1467">
+            <rdf:Description rdf:about="#G_b1224">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10638"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167510,48 +174885,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1227" sboTerm="SBO:0000243" fbc:id="G_b1227" fbc:name="G_b1227" fbc:label="G_b1227">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1227">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11350"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945808"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10640"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1465" sboTerm="SBO:0000243" fbc:id="G_b1465" fbc:name="G_b1465" fbc:label="G_b1465">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1465">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004889"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF32"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10644"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2207" sboTerm="SBO:0000243" fbc:id="G_b2207" fbc:name="G_b2207" fbc:label="G_b2207">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167608,7 +174941,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4374" sboTerm="SBO:0000243" fbc:id="G_b4374" fbc:name="G_b4374" fbc:label="G_b4374">
+      <fbc:geneProduct metaid="G_b2291" sboTerm="SBO:0000243" fbc:id="G_b2291" fbc:name="G_b2291" fbc:label="G_b2291">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167616,13 +174949,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4374">
+            <rdf:Description rdf:about="#G_b2291">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948899"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14102"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167650,7 +174983,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2291" sboTerm="SBO:0000243" fbc:id="G_b2291" fbc:name="G_b2291" fbc:label="G_b2291">
+      <fbc:geneProduct metaid="G_b4374" sboTerm="SBO:0000243" fbc:id="G_b4374" fbc:name="G_b4374" fbc:label="G_b4374">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167658,13 +174991,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2291">
+            <rdf:Description rdf:about="#G_b4374">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76491"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946771"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12115"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167713,27 +175046,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4161" sboTerm="SBO:0000243" fbc:id="G_b4161" fbc:name="G_b4161" fbc:label="G_b4161">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4161">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013626"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39286"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12479"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0014" sboTerm="SBO:0000243" fbc:id="G_b0014" fbc:name="G_b0014" fbc:label="G_b0014">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167762,7 +175074,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4394" sboTerm="SBO:0000243" fbc:id="G_b4394" fbc:name="G_b4394" fbc:label="G_b4394">
+      <fbc:geneProduct metaid="G_b4161" sboTerm="SBO:0000243" fbc:id="G_b4161" fbc:name="G_b4161" fbc:label="G_b4161">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167770,20 +175082,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4394">
+            <rdf:Description rdf:about="#G_b4161">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014411"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39411"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12479"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4352" sboTerm="SBO:0000243" fbc:id="G_b4352" fbc:name="G_b4352" fbc:label="G_b4352">
+      <fbc:geneProduct metaid="G_b4394" sboTerm="SBO:0000243" fbc:id="G_b4394" fbc:name="G_b4394" fbc:label="G_b4394">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167791,34 +175103,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4352">
+            <rdf:Description rdf:about="#G_b4394">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014273"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014411"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39411"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12600"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3871" sboTerm="SBO:0000243" fbc:id="G_b3871" fbc:name="G_b3871" fbc:label="G_b3871">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3980" sboTerm="SBO:0000243" fbc:id="G_b3980" fbc:name="G_b3980" fbc:label="G_b3980">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2918" sboTerm="SBO:0000243" fbc:id="G_b2918" fbc:name="G_b2918" fbc:label="G_b2918">
+      <fbc:geneProduct metaid="G_b2727" sboTerm="SBO:0000243" fbc:id="G_b2727" fbc:name="G_b2727" fbc:label="G_b2727">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167826,20 +175124,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2918">
+            <rdf:Description rdf:about="#G_b2727">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009579"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27254"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947412"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAN3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10484"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2727" sboTerm="SBO:0000243" fbc:id="G_b2727" fbc:name="G_b2727" fbc:label="G_b2727">
+      <fbc:geneProduct metaid="G_b4173" sboTerm="SBO:0000243" fbc:id="G_b4173" fbc:name="G_b4173" fbc:label="G_b4173">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167847,13 +175145,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2727">
+            <rdf:Description rdf:about="#G_b4173">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008960"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAN3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10437"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167881,7 +175179,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2173" sboTerm="SBO:0000243" fbc:id="G_b2173" fbc:name="G_b2173" fbc:label="G_b2173">
+      <fbc:geneProduct metaid="G_b4352" sboTerm="SBO:0000243" fbc:id="G_b4352" fbc:name="G_b4352" fbc:label="G_b4352">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167889,19 +175187,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2173">
+            <rdf:Description rdf:about="#G_b4352">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10021"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3980" sboTerm="SBO:0000243" fbc:id="G_b3980" fbc:name="G_b3980" fbc:label="G_b3980">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3340" sboTerm="SBO:0000243" fbc:id="G_b3340" fbc:name="G_b3340" fbc:label="G_b3340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167920,7 +175225,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4173" sboTerm="SBO:0000243" fbc:id="G_b4173" fbc:name="G_b4173" fbc:label="G_b4173">
+      <fbc:geneProduct metaid="G_b3871" sboTerm="SBO:0000243" fbc:id="G_b3871" fbc:name="G_b3871" fbc:label="G_b3871">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2173" sboTerm="SBO:0000243" fbc:id="G_b2173" fbc:name="G_b2173" fbc:label="G_b2173">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167928,13 +175240,34 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4173">
+            <rdf:Description rdf:about="#G_b2173">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013661"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25519"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12104"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2918" sboTerm="SBO:0000243" fbc:id="G_b2918" fbc:name="G_b2918" fbc:label="G_b2918">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2918">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P27254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11445"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168158,7 +175491,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4071" sboTerm="SBO:0000243" fbc:id="G_b4071" fbc:name="G_b4071" fbc:label="G_b4071">
+      <fbc:geneProduct metaid="G_b4072" sboTerm="SBO:0000243" fbc:id="G_b4072" fbc:name="G_b4072" fbc:label="G_b4072">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168166,20 +175499,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4071">
+            <rdf:Description rdf:about="#G_b4072">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAK7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11946"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4072" sboTerm="SBO:0000243" fbc:id="G_b4072" fbc:name="G_b4072" fbc:label="G_b4072">
+      <fbc:geneProduct metaid="G_b4070" sboTerm="SBO:0000243" fbc:id="G_b4070" fbc:name="G_b4070" fbc:label="G_b4070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168187,20 +175520,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4072">
+            <rdf:Description rdf:about="#G_b4070">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAK7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948581"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11781"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4070" sboTerm="SBO:0000243" fbc:id="G_b4070" fbc:name="G_b4070" fbc:label="G_b4070">
+      <fbc:geneProduct metaid="G_b4071" sboTerm="SBO:0000243" fbc:id="G_b4071" fbc:name="G_b4071" fbc:label="G_b4071">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168208,13 +175541,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4070">
+            <rdf:Description rdf:about="#G_b4071">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013342"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11945"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168242,7 +175575,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2579" sboTerm="SBO:0000243" fbc:id="G_b2579" fbc:name="G_b2579" fbc:label="G_b2579">
+      <fbc:geneProduct metaid="G_b3114" sboTerm="SBO:0000243" fbc:id="G_b3114" fbc:name="G_b3114" fbc:label="G_b3114">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168250,13 +175583,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2579">
+            <rdf:Description rdf:about="#G_b3114">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P68066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947068"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P42632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947623"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12758"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168289,7 +175622,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0903" sboTerm="SBO:0000243" fbc:id="G_b0903" fbc:name="G_b0903" fbc:label="G_b0903">
+      <fbc:geneProduct metaid="G_b2579" sboTerm="SBO:0000243" fbc:id="G_b2579" fbc:name="G_b2579" fbc:label="G_b2579">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168297,25 +175630,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0903">
+            <rdf:Description rdf:about="#G_b2579">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003071"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09373"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945514"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001150"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005949"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WH32"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P68066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11784"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3114" sboTerm="SBO:0000243" fbc:id="G_b3114" fbc:name="G_b3114" fbc:label="G_b3114">
+      <fbc:geneProduct metaid="G_b0903" sboTerm="SBO:0000243" fbc:id="G_b0903" fbc:name="G_b0903" fbc:label="G_b0903">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168323,20 +175651,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3114">
+            <rdf:Description rdf:about="#G_b0903">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010242"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P42632"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947623"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WH32"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174224"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2870" sboTerm="SBO:0000243" fbc:id="G_b2870" fbc:name="G_b2870" fbc:label="G_b2870">
+      <fbc:geneProduct metaid="G_b0273" sboTerm="SBO:0000243" fbc:id="G_b0273" fbc:name="G_b0273" fbc:label="G_b0273">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168344,23 +175677,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2870">
+            <rdf:Description rdf:about="#G_b0273">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002292"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006130"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006132"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10197"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P18186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000939"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10067"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0273" sboTerm="SBO:0000243" fbc:id="G_b0273" fbc:name="G_b0273" fbc:label="G_b0273">
+      <fbc:geneProduct metaid="G_b4254" sboTerm="SBO:0000243" fbc:id="G_b4254" fbc:name="G_b4254" fbc:label="G_b4254">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168368,20 +175698,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0273">
+            <rdf:Description rdf:about="#G_b4254">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000939"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06960"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944844"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P04391"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10069"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4254" sboTerm="SBO:0000243" fbc:id="G_b4254" fbc:name="G_b4254" fbc:label="G_b4254">
+      <fbc:geneProduct metaid="G_b2870" sboTerm="SBO:0000243" fbc:id="G_b2870" fbc:name="G_b2870" fbc:label="G_b2870">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168389,13 +175719,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4254">
+            <rdf:Description rdf:about="#G_b2870">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013927"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P04391"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948774"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P18186"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168493,13 +175826,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2311" sboTerm="SBO:0000243" fbc:id="G_b2311" fbc:name="G_b2311" fbc:label="G_b2311">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3843" sboTerm="SBO:0000243" fbc:id="G_b3843" fbc:name="G_b3843" fbc:label="G_b3843">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -168524,6 +175850,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2311" sboTerm="SBO:0000243" fbc:id="G_b2311" fbc:name="G_b2311" fbc:label="G_b2311">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3835" sboTerm="SBO:0000243" fbc:id="G_b3835" fbc:name="G_b3835" fbc:label="G_b3835">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -168552,7 +175885,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0693" sboTerm="SBO:0000243" fbc:id="G_b0693" fbc:name="G_b0693" fbc:label="G_b0693">
+      <fbc:geneProduct metaid="G_b2965" sboTerm="SBO:0000243" fbc:id="G_b2965" fbc:name="G_b2965" fbc:label="G_b2965">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168560,20 +175893,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0693">
+            <rdf:Description rdf:about="#G_b2965">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945297"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10964"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947457"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10961"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2965" sboTerm="SBO:0000243" fbc:id="G_b2965" fbc:name="G_b2965" fbc:label="G_b2965">
+      <fbc:geneProduct metaid="G_b0693" sboTerm="SBO:0000243" fbc:id="G_b0693" fbc:name="G_b0693" fbc:label="G_b0693">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168581,13 +175914,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2965">
+            <rdf:Description rdf:about="#G_b0693">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009730"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947457"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945297"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10964"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168769,7 +176102,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1389" sboTerm="SBO:0000243" fbc:id="G_b1389" fbc:name="G_b1389" fbc:label="G_b1389">
+      <fbc:geneProduct metaid="G_b1390" sboTerm="SBO:0000243" fbc:id="G_b1390" fbc:name="G_b1390" fbc:label="G_b1390">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168777,13 +176110,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1389">
+            <rdf:Description rdf:about="#G_b1390">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004651"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947595"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13737"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168811,7 +176144,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1392" sboTerm="SBO:0000243" fbc:id="G_b1392" fbc:name="G_b1392" fbc:label="G_b1392">
+      <fbc:geneProduct metaid="G_b1388" sboTerm="SBO:0000243" fbc:id="G_b1388" fbc:name="G_b1388" fbc:label="G_b1388">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168819,20 +176152,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1392">
+            <rdf:Description rdf:about="#G_b1388">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004657"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945962"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13739"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13736"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1390" sboTerm="SBO:0000243" fbc:id="G_b1390" fbc:name="G_b1390" fbc:label="G_b1390">
+      <fbc:geneProduct metaid="G_b1389" sboTerm="SBO:0000243" fbc:id="G_b1389" fbc:name="G_b1389" fbc:label="G_b1389">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168840,20 +176173,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1390">
+            <rdf:Description rdf:about="#G_b1389">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004653"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76079"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945956"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14299"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1388" sboTerm="SBO:0000243" fbc:id="G_b1388" fbc:name="G_b1388" fbc:label="G_b1388">
+      <fbc:geneProduct metaid="G_b1392" sboTerm="SBO:0000243" fbc:id="G_b1392" fbc:name="G_b1392" fbc:label="G_b1392">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168861,13 +176194,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1388">
+            <rdf:Description rdf:about="#G_b1392">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004649"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76077"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13739"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169106,7 +176439,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2067" sboTerm="SBO:0000243" fbc:id="G_b2067" fbc:name="G_b2067" fbc:label="G_b2067">
+      <fbc:geneProduct metaid="G_b1168" sboTerm="SBO:0000243" fbc:id="G_b1168" fbc:name="G_b1168" fbc:label="G_b1168">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169114,18 +176447,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2067">
+            <rdf:Description rdf:about="#G_b1168">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046455"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1168" sboTerm="SBO:0000243" fbc:id="G_b1168" fbc:name="G_b1168" fbc:label="G_b1168">
+      <fbc:geneProduct metaid="G_b2067" sboTerm="SBO:0000243" fbc:id="G_b2067" fbc:name="G_b2067" fbc:label="G_b2067">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169133,11 +176466,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1168">
+            <rdf:Description rdf:about="#G_b2067">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046455"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169282,25 +176615,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0792" sboTerm="SBO:0000243" fbc:id="G_b0792" fbc:name="G_b0792" fbc:label="G_b0792">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0792">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046096"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3800" sboTerm="SBO:0000243" fbc:id="G_b3800" fbc:name="G_b3800" fbc:label="G_b3800">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169401,13 +176715,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0823" sboTerm="SBO:0000243" fbc:id="G_b0823" fbc:name="G_b0823" fbc:label="G_b0823">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3952" sboTerm="SBO:0000243" fbc:id="G_b3952" fbc:name="G_b3952" fbc:label="G_b3952">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169436,6 +176743,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0823" sboTerm="SBO:0000243" fbc:id="G_b0823" fbc:name="G_b0823" fbc:label="G_b0823">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0824" sboTerm="SBO:0000243" fbc:id="G_b0824" fbc:name="G_b0824" fbc:label="G_b0824">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169572,7 +176886,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0755" sboTerm="SBO:0000243" fbc:id="G_b0755" fbc:name="G_b0755" fbc:label="G_b0755">
+      <fbc:geneProduct metaid="G_b3385" sboTerm="SBO:0000243" fbc:id="G_b3385" fbc:name="G_b3385" fbc:label="G_b3385">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169580,31 +176894,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0755">
+            <rdf:Description rdf:about="#G_b3385">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P62707"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945068"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001345"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHR3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173984"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11871"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4395" sboTerm="SBO:0000243" fbc:id="G_b4395" fbc:name="G_b4395" fbc:label="G_b4395">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3612" sboTerm="SBO:0000243" fbc:id="G_b3612" fbc:name="G_b3612" fbc:label="G_b3612">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169626,7 +176928,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0688" sboTerm="SBO:0000243" fbc:id="G_b0688" fbc:name="G_b0688" fbc:label="G_b0688">
+      <fbc:geneProduct metaid="G_b4395" sboTerm="SBO:0000243" fbc:id="G_b4395" fbc:name="G_b4395" fbc:label="G_b4395">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0755" sboTerm="SBO:0000243" fbc:id="G_b0755" fbc:name="G_b0755" fbc:label="G_b0755">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169634,13 +176943,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0688">
+            <rdf:Description rdf:about="#G_b0755">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002345"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36938"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945271"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P62707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHR3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173984"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169668,6 +176982,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b0688" sboTerm="SBO:0000243" fbc:id="G_b0688" fbc:name="G_b0688" fbc:label="G_b0688">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b0688">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12144"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0418" sboTerm="SBO:0000243" fbc:id="G_b0418" fbc:name="G_b0418" fbc:label="G_b0418">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169710,6 +177045,111 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2198" sboTerm="SBO:0000243" fbc:id="G_b2198" fbc:name="G_b2198" fbc:label="G_b2198">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2198">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABM5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12169"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2197" sboTerm="SBO:0000243" fbc:id="G_b2197" fbc:name="G_b2197" fbc:label="G_b2197">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2197">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12055"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2199" sboTerm="SBO:0000243" fbc:id="G_b2199" fbc:name="G_b2199" fbc:label="G_b2199">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2199">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABM1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12057"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2201" sboTerm="SBO:0000243" fbc:id="G_b2201" fbc:name="G_b2201" fbc:label="G_b2201">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2201">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12059"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2200" sboTerm="SBO:0000243" fbc:id="G_b2200" fbc:name="G_b2200" fbc:label="G_b2200">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2200">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12058"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1473" sboTerm="SBO:0000243" fbc:id="G_b1473" fbc:name="G_b1473" fbc:label="G_b1473">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169754,7 +177194,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2987" sboTerm="SBO:0000243" fbc:id="G_b2987" fbc:name="G_b2987" fbc:label="G_b2987">
+      <fbc:geneProduct metaid="G_b3493" sboTerm="SBO:0000243" fbc:id="G_b3493" fbc:name="G_b3493" fbc:label="G_b3493">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169762,20 +177202,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2987">
+            <rdf:Description rdf:about="#G_b3493">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009800"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P43676"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFJ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12230"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3493" sboTerm="SBO:0000243" fbc:id="G_b3493" fbc:name="G_b3493" fbc:label="G_b3493">
+      <fbc:geneProduct metaid="G_b2987" sboTerm="SBO:0000243" fbc:id="G_b2987" fbc:name="G_b2987" fbc:label="G_b2987">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169783,13 +177223,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3493">
+            <rdf:Description rdf:about="#G_b2987">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011407"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFJ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948009"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P43676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12883"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169824,7 +177264,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3726" sboTerm="SBO:0000243" fbc:id="G_b3726" fbc:name="G_b3726" fbc:label="G_b3726">
+      <fbc:geneProduct metaid="G_b3727" sboTerm="SBO:0000243" fbc:id="G_b3727" fbc:name="G_b3727" fbc:label="G_b3727">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169832,20 +177272,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3726">
+            <rdf:Description rdf:about="#G_b3727">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07654"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948239"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGH8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10784"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3728" sboTerm="SBO:0000243" fbc:id="G_b3728" fbc:name="G_b3728" fbc:label="G_b3728">
+      <fbc:geneProduct metaid="G_b3725" sboTerm="SBO:0000243" fbc:id="G_b3725" fbc:name="G_b3725" fbc:label="G_b3725">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169853,20 +177293,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3728">
+            <rdf:Description rdf:about="#G_b3725">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG82"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948237"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAH0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9S3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176942"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3727" sboTerm="SBO:0000243" fbc:id="G_b3727" fbc:name="G_b3727" fbc:label="G_b3727">
+      <fbc:geneProduct metaid="G_b3726" sboTerm="SBO:0000243" fbc:id="G_b3726" fbc:name="G_b3726" fbc:label="G_b3726">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169874,20 +177319,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3727">
+            <rdf:Description rdf:about="#G_b3726">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGH8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948238"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10782"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3725" sboTerm="SBO:0000243" fbc:id="G_b3725" fbc:name="G_b3725" fbc:label="G_b3725">
+      <fbc:geneProduct metaid="G_b3728" sboTerm="SBO:0000243" fbc:id="G_b3728" fbc:name="G_b3728" fbc:label="G_b3728">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169895,18 +177340,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3725">
+            <rdf:Description rdf:about="#G_b3728">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012179"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAH0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9S3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176942"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG82"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10734"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170267,6 +177707,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4383" sboTerm="SBO:0000243" fbc:id="G_b4383" fbc:name="G_b4383" fbc:label="G_b4383">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4383">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6K6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10220"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3380" sboTerm="SBO:0000243" fbc:id="G_b3380" fbc:name="G_b3380" fbc:label="G_b3380">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -170274,7 +177735,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4383" sboTerm="SBO:0000243" fbc:id="G_b4383" fbc:name="G_b4383" fbc:label="G_b4383">
+      <fbc:geneProduct metaid="G_b2739" sboTerm="SBO:0000243" fbc:id="G_b2739" fbc:name="G_b2739" fbc:label="G_b2739">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3850" sboTerm="SBO:0000243" fbc:id="G_b3850" fbc:name="G_b3850" fbc:label="G_b3850">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170282,13 +177750,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4383">
+            <rdf:Description rdf:about="#G_b3850">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6K6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACB4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11485"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170332,27 +177800,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3850" sboTerm="SBO:0000243" fbc:id="G_b3850" fbc:name="G_b3850" fbc:label="G_b3850">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3850">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012577"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACB4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948331"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11485"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2536" sboTerm="SBO:0000243" fbc:id="G_b2536" fbc:name="G_b2536" fbc:label="G_b2536">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -170828,7 +178275,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1442" sboTerm="SBO:0000243" fbc:id="G_b1442" fbc:name="G_b1442" fbc:label="G_b1442">
+      <fbc:geneProduct metaid="G_b1440" sboTerm="SBO:0000243" fbc:id="G_b1440" fbc:name="G_b1440" fbc:label="G_b1440">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170836,20 +178283,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1442">
+            <rdf:Description rdf:about="#G_b1440">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004807"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945976"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13762"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0854" sboTerm="SBO:0000243" fbc:id="G_b0854" fbc:name="G_b0854" fbc:label="G_b0854">
+      <fbc:geneProduct metaid="G_b1442" sboTerm="SBO:0000243" fbc:id="G_b1442" fbc:name="G_b1442" fbc:label="G_b1442">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170857,20 +178304,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0854">
+            <rdf:Description rdf:about="#G_b1442">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945480"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13764"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0856" sboTerm="SBO:0000243" fbc:id="G_b0856" fbc:name="G_b0856" fbc:label="G_b0856">
+      <fbc:geneProduct metaid="G_b0857" sboTerm="SBO:0000243" fbc:id="G_b0857" fbc:name="G_b0857" fbc:label="G_b0857">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170878,20 +178325,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0856">
+            <rdf:Description rdf:about="#G_b0857">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFL1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11632"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1440" sboTerm="SBO:0000243" fbc:id="G_b1440" fbc:name="G_b1440" fbc:label="G_b1440">
+      <fbc:geneProduct metaid="G_b1125" sboTerm="SBO:0000243" fbc:id="G_b1125" fbc:name="G_b1125" fbc:label="G_b1125">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170899,20 +178346,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1440">
+            <rdf:Description rdf:about="#G_b1125">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004803"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76108"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946005"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10750"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0857" sboTerm="SBO:0000243" fbc:id="G_b0857" fbc:name="G_b0857" fbc:label="G_b0857">
+      <fbc:geneProduct metaid="G_b1123" sboTerm="SBO:0000243" fbc:id="G_b1123" fbc:name="G_b1123" fbc:label="G_b1123">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170920,20 +178367,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0857">
+            <rdf:Description rdf:about="#G_b1123">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFL1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10752"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1441" sboTerm="SBO:0000243" fbc:id="G_b1441" fbc:name="G_b1441" fbc:label="G_b1441">
+      <fbc:geneProduct metaid="G_b1443" sboTerm="SBO:0000243" fbc:id="G_b1443" fbc:name="G_b1443" fbc:label="G_b1443">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170941,20 +178388,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1441">
+            <rdf:Description rdf:about="#G_b1443">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004805"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946007"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFR9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13765"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0855" sboTerm="SBO:0000243" fbc:id="G_b0855" fbc:name="G_b0855" fbc:label="G_b0855">
+      <fbc:geneProduct metaid="G_b1126" sboTerm="SBO:0000243" fbc:id="G_b1126" fbc:name="G_b1126" fbc:label="G_b1126">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170962,20 +178409,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0855">
+            <rdf:Description rdf:about="#G_b1126">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31134"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945476"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11630"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10749"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1123" sboTerm="SBO:0000243" fbc:id="G_b1123" fbc:name="G_b1123" fbc:label="G_b1123">
+      <fbc:geneProduct metaid="G_b0854" sboTerm="SBO:0000243" fbc:id="G_b0854" fbc:name="G_b0854" fbc:label="G_b0854">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170983,20 +178430,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1123">
+            <rdf:Description rdf:about="#G_b0854">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003789"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945682"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31133"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11629"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1125" sboTerm="SBO:0000243" fbc:id="G_b1125" fbc:name="G_b1125" fbc:label="G_b1125">
+      <fbc:geneProduct metaid="G_b0856" sboTerm="SBO:0000243" fbc:id="G_b0856" fbc:name="G_b0856" fbc:label="G_b0856">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171004,20 +178451,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1125">
+            <rdf:Description rdf:about="#G_b0856">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11631"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1126" sboTerm="SBO:0000243" fbc:id="G_b1126" fbc:name="G_b1126" fbc:label="G_b1126">
+      <fbc:geneProduct metaid="G_b1124" sboTerm="SBO:0000243" fbc:id="G_b1124" fbc:name="G_b1124" fbc:label="G_b1124">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171025,20 +178472,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1126">
+            <rdf:Description rdf:about="#G_b1124">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946323"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10751"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1443" sboTerm="SBO:0000243" fbc:id="G_b1443" fbc:name="G_b1443" fbc:label="G_b1443">
+      <fbc:geneProduct metaid="G_b0855" sboTerm="SBO:0000243" fbc:id="G_b0855" fbc:name="G_b0855" fbc:label="G_b0855">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171046,20 +178493,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1443">
+            <rdf:Description rdf:about="#G_b0855">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004809"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFR9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945903"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11630"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1124" sboTerm="SBO:0000243" fbc:id="G_b1124" fbc:name="G_b1124" fbc:label="G_b1124">
+      <fbc:geneProduct metaid="G_b1441" sboTerm="SBO:0000243" fbc:id="G_b1441" fbc:name="G_b1441" fbc:label="G_b1441">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171067,13 +178514,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1124">
+            <rdf:Description rdf:about="#G_b1441">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003791"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945691"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10751"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13763"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171164,7 +178611,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1095" sboTerm="SBO:0000243" fbc:id="G_b1095" fbc:name="G_b1095" fbc:label="G_b1095">
+      <fbc:geneProduct metaid="G_b1854" sboTerm="SBO:0000243" fbc:id="G_b1854" fbc:name="G_b1854" fbc:label="G_b1854">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171172,23 +178619,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1095">
+            <rdf:Description rdf:about="#G_b1854">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003705"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAI5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946665"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ22"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10803"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1854" sboTerm="SBO:0000243" fbc:id="G_b1854" fbc:name="G_b1854" fbc:label="G_b1854">
+      <fbc:geneProduct metaid="G_b1676" sboTerm="SBO:0000243" fbc:id="G_b1676" fbc:name="G_b1676" fbc:label="G_b1676">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171196,20 +178640,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1854">
+            <rdf:Description rdf:about="#G_b1676">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006182"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21599"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946527"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD61"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10804"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1676" sboTerm="SBO:0000243" fbc:id="G_b1676" fbc:name="G_b1676" fbc:label="G_b1676">
+      <fbc:geneProduct metaid="G_b1095" sboTerm="SBO:0000243" fbc:id="G_b1095" fbc:name="G_b1095" fbc:label="G_b1095">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171217,13 +178661,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1676">
+            <rdf:Description rdf:about="#G_b1095">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005600"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD61"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946179"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAI5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174440"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171255,7 +178702,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0879" sboTerm="SBO:0000243" fbc:id="G_b0879" fbc:name="G_b0879" fbc:label="G_b0879">
+      <fbc:geneProduct metaid="G_b0878" sboTerm="SBO:0000243" fbc:id="G_b0878" fbc:name="G_b0878" fbc:label="G_b0878">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171263,18 +178710,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0879">
+            <rdf:Description rdf:about="#G_b0878">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042499"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0878" sboTerm="SBO:0000243" fbc:id="G_b0878" fbc:name="G_b0878" fbc:label="G_b0878">
+      <fbc:geneProduct metaid="G_b0879" sboTerm="SBO:0000243" fbc:id="G_b0879" fbc:name="G_b0879" fbc:label="G_b0879">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171282,11 +178729,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0878">
+            <rdf:Description rdf:about="#G_b0879">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042499"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042503"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171417,7 +178864,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1662" sboTerm="SBO:0000243" fbc:id="G_b1662" fbc:name="G_b1662" fbc:label="G_b1662">
+      <fbc:geneProduct metaid="G_b0415" sboTerm="SBO:0000243" fbc:id="G_b0415" fbc:name="G_b0415" fbc:label="G_b0415">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171425,20 +178872,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1662">
+            <rdf:Description rdf:about="#G_b0415">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005557"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFU8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945848"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P61714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11322"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0415" sboTerm="SBO:0000243" fbc:id="G_b0415" fbc:name="G_b0415" fbc:label="G_b0415">
+      <fbc:geneProduct metaid="G_b1662" sboTerm="SBO:0000243" fbc:id="G_b1662" fbc:name="G_b1662" fbc:label="G_b1662">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171446,13 +178893,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0415">
+            <rdf:Description rdf:about="#G_b1662">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001444"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P61714"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946453"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFU8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11406"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171501,7 +178948,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0061" sboTerm="SBO:0000243" fbc:id="G_b0061" fbc:name="G_b0061" fbc:label="G_b0061">
+      <fbc:geneProduct metaid="G_b4198" sboTerm="SBO:0000243" fbc:id="G_b4198" fbc:name="G_b4198" fbc:label="G_b4198">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171509,20 +178956,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0061">
+            <rdf:Description rdf:about="#G_b4198">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000209"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12498"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4198" sboTerm="SBO:0000243" fbc:id="G_b4198" fbc:name="G_b4198" fbc:label="G_b4198">
+      <fbc:geneProduct metaid="G_b0061" sboTerm="SBO:0000243" fbc:id="G_b0061" fbc:name="G_b0061" fbc:label="G_b0061">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171530,13 +178977,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4198">
+            <rdf:Description rdf:about="#G_b0061">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013734"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948711"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10055"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171585,30 +179032,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2546" sboTerm="SBO:0000243" fbc:id="G_b2546" fbc:name="G_b2546" fbc:label="G_b2546">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2546">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q186E3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q186E3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001851"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10880"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36948"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3753" sboTerm="SBO:0000243" fbc:id="G_b3753" fbc:name="G_b3753" fbc:label="G_b3753">
+      <fbc:geneProduct metaid="G_b2548" sboTerm="SBO:0000243" fbc:id="G_b2548" fbc:name="G_b2548" fbc:label="G_b2548">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171616,20 +179040,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3753">
+            <rdf:Description rdf:about="#G_b2548">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10881"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P36949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898695"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2548" sboTerm="SBO:0000243" fbc:id="G_b2548" fbc:name="G_b2548" fbc:label="G_b2548">
+      <fbc:geneProduct metaid="G_b4264" sboTerm="SBO:0000243" fbc:id="G_b4264" fbc:name="G_b4264" fbc:label="G_b4264">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171637,10 +179058,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2548">
+            <rdf:Description rdf:about="#G_b4264">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q9X6A9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176137"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171668,26 +179091,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4264" sboTerm="SBO:0000243" fbc:id="G_b4264" fbc:name="G_b4264" fbc:label="G_b4264">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4264">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q9X6A9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176137"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3751" sboTerm="SBO:0000243" fbc:id="G_b3751" fbc:name="G_b3751" fbc:label="G_b3751">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -171709,27 +179112,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3748" sboTerm="SBO:0000243" fbc:id="G_b3748" fbc:name="G_b3748" fbc:label="G_b3748">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3748">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P04982"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10817"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2714" sboTerm="SBO:0000243" fbc:id="G_b2714" fbc:name="G_b2714" fbc:label="G_b2714">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -171792,6 +179174,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3748" sboTerm="SBO:0000243" fbc:id="G_b3748" fbc:name="G_b3748" fbc:label="G_b3748">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3748">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P04982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10817"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3904" sboTerm="SBO:0000243" fbc:id="G_b3904" fbc:name="G_b3904" fbc:label="G_b3904">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -171856,7 +179259,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2234" sboTerm="SBO:0000243" fbc:id="G_b2234" fbc:name="G_b2234" fbc:label="G_b2234">
+      <fbc:geneProduct metaid="G_b2675" sboTerm="SBO:0000243" fbc:id="G_b2675" fbc:name="G_b2675" fbc:label="G_b2675">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171864,20 +179267,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2234">
+            <rdf:Description rdf:about="#G_b2675">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007383"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946612"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20257"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2675" sboTerm="SBO:0000243" fbc:id="G_b2675" fbc:name="G_b2675" fbc:label="G_b2675">
+      <fbc:geneProduct metaid="G_b2235" sboTerm="SBO:0000243" fbc:id="G_b2235" fbc:name="G_b2235" fbc:label="G_b2235">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171885,20 +179288,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2675">
+            <rdf:Description rdf:about="#G_b2235">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008806"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947155"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946732"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10661"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2235" sboTerm="SBO:0000243" fbc:id="G_b2235" fbc:name="G_b2235" fbc:label="G_b2235">
+      <fbc:geneProduct metaid="G_b2234" sboTerm="SBO:0000243" fbc:id="G_b2234" fbc:name="G_b2234" fbc:label="G_b2234">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171906,13 +179309,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2235">
+            <rdf:Description rdf:about="#G_b2234">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007386"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69924"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946732"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10660"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171982,6 +179385,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4301" sboTerm="SBO:0000243" fbc:id="G_b4301" fbc:name="G_b4301" fbc:label="G_b4301">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3386" sboTerm="SBO:0000243" fbc:id="G_b3386" fbc:name="G_b3386" fbc:label="G_b3386">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -172003,13 +179413,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4301" sboTerm="SBO:0000243" fbc:id="G_b4301" fbc:name="G_b4301" fbc:label="G_b4301">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2914" sboTerm="SBO:0000243" fbc:id="G_b2914" fbc:name="G_b2914" fbc:label="G_b2914">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -172052,7 +179455,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2752" sboTerm="SBO:0000243" fbc:id="G_b2752" fbc:name="G_b2752" fbc:label="G_b2752">
+      <fbc:geneProduct metaid="G_b2751" sboTerm="SBO:0000243" fbc:id="G_b2751" fbc:name="G_b2751" fbc:label="G_b2751">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172060,24 +179463,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2752">
+            <rdf:Description rdf:about="#G_b2751">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002500"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBS9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10194"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2751" sboTerm="SBO:0000243" fbc:id="G_b2751" fbc:name="G_b2751" fbc:label="G_b2751">
+      <fbc:geneProduct metaid="G_b2752" sboTerm="SBO:0000243" fbc:id="G_b2752" fbc:name="G_b2752" fbc:label="G_b2752">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172085,13 +179484,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2751">
+            <rdf:Description rdf:about="#G_b2752">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23845"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBS9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176183"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -172342,7 +179745,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4471" sboTerm="SBO:0000243" fbc:id="G_b4471" fbc:name="G_b4471" fbc:label="G_b4471">
+      <fbc:geneProduct metaid="G_b3117" sboTerm="SBO:0000243" fbc:id="G_b3117" fbc:name="G_b3117" fbc:label="G_b3117">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172350,20 +179753,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4471">
+            <rdf:Description rdf:about="#G_b3117">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P42630"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847724"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGF6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10990"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3117" sboTerm="SBO:0000243" fbc:id="G_b3117" fbc:name="G_b3117" fbc:label="G_b3117">
+      <fbc:geneProduct metaid="G_b4471" sboTerm="SBO:0000243" fbc:id="G_b4471" fbc:name="G_b4471" fbc:label="G_b4471">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172371,13 +179774,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3117">
+            <rdf:Description rdf:about="#G_b4471">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010249"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGF6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P42630"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12756"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -172426,7 +179829,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2796" sboTerm="SBO:0000243" fbc:id="G_b2796" fbc:name="G_b2796" fbc:label="G_b2796">
+      <fbc:geneProduct metaid="G_b3539" sboTerm="SBO:0000243" fbc:id="G_b3539" fbc:name="G_b3539" fbc:label="G_b3539">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172434,20 +179837,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2796">
+            <rdf:Description rdf:about="#G_b3539">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009169"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAD6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046374"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3539" sboTerm="SBO:0000243" fbc:id="G_b3539" fbc:name="G_b3539" fbc:label="G_b3539">
+      <fbc:geneProduct metaid="G_b2796" sboTerm="SBO:0000243" fbc:id="G_b2796" fbc:name="G_b2796" fbc:label="G_b2796">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172455,11 +179856,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3539">
+            <rdf:Description rdf:about="#G_b2796">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAD6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12142"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -172508,7 +179911,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2154" sboTerm="SBO:0000243" fbc:id="G_b2154" fbc:name="G_b2154" fbc:label="G_b2154">
+      <fbc:geneProduct metaid="G_b0355" sboTerm="SBO:0000243" fbc:id="G_b0355" fbc:name="G_b0355" fbc:label="G_b0355">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172516,20 +179919,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2154">
+            <rdf:Description rdf:about="#G_b0355">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007124"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P51025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13295"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0355" sboTerm="SBO:0000243" fbc:id="G_b0355" fbc:name="G_b0355" fbc:label="G_b0355">
+      <fbc:geneProduct metaid="G_b2154" sboTerm="SBO:0000243" fbc:id="G_b2154" fbc:name="G_b2154" fbc:label="G_b2154">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172537,13 +179940,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0355">
+            <rdf:Description rdf:about="#G_b2154">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P51025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13295"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12026"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -172676,7 +180079,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0388" sboTerm="SBO:0000243" fbc:id="G_b0388" fbc:name="G_b0388" fbc:label="G_b0388">
+      <fbc:geneProduct metaid="G_b3390" sboTerm="SBO:0000243" fbc:id="G_b3390" fbc:name="G_b3390" fbc:label="G_b3390">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172684,20 +180087,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0388">
+            <rdf:Description rdf:about="#G_b3390">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001353"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6E1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6D7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10081"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3390" sboTerm="SBO:0000243" fbc:id="G_b3390" fbc:name="G_b3390" fbc:label="G_b3390">
+      <fbc:geneProduct metaid="G_b0388" sboTerm="SBO:0000243" fbc:id="G_b0388" fbc:name="G_b0388" fbc:label="G_b0388">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172705,13 +180108,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3390">
+            <rdf:Description rdf:about="#G_b0388">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6D7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6E1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10082"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -172757,13 +180160,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4600" sboTerm="SBO:0000243" fbc:id="G_b4600" fbc:name="G_b4600" fbc:label="G_b4600">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b1981" sboTerm="SBO:0000243" fbc:id="G_b1981" fbc:name="G_b1981" fbc:label="G_b1981">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -172785,6 +180181,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4600" sboTerm="SBO:0000243" fbc:id="G_b4600" fbc:name="G_b4600" fbc:label="G_b4600">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2413" sboTerm="SBO:0000243" fbc:id="G_b2413" fbc:name="G_b2413" fbc:label="G_b2413">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -172913,7 +180316,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1656" sboTerm="SBO:0000243" fbc:id="G_b1656" fbc:name="G_b1656" fbc:label="G_b1656">
+      <fbc:geneProduct metaid="G_b3908" sboTerm="SBO:0000243" fbc:id="G_b3908" fbc:name="G_b3908" fbc:label="G_b3908">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172921,20 +180324,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1656">
+            <rdf:Description rdf:about="#G_b3908">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGD3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944953"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948403"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10953"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3908" sboTerm="SBO:0000243" fbc:id="G_b3908" fbc:name="G_b3908" fbc:label="G_b3908">
+      <fbc:geneProduct metaid="G_b1656" sboTerm="SBO:0000243" fbc:id="G_b1656" fbc:name="G_b1656" fbc:label="G_b1656">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -172942,13 +180345,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3908">
+            <rdf:Description rdf:about="#G_b1656">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948403"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGD3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10954"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173046,6 +180449,32 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1699" sboTerm="SBO:0000243" fbc:id="G_b1699" fbc:name="G_b1699" fbc:label="G_b1699">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1699">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/231675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS3800.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS64090.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100763190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/66841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS17418.1"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2769" sboTerm="SBO:0000243" fbc:id="G_b2769" fbc:name="G_b2769" fbc:label="G_b2769">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -173073,7 +180502,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1699" sboTerm="SBO:0000243" fbc:id="G_b1699" fbc:name="G_b1699" fbc:label="G_b1699">
+      <fbc:geneProduct metaid="G_b0724" sboTerm="SBO:0000243" fbc:id="G_b0724" fbc:name="G_b0724" fbc:label="G_b0724">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173081,18 +180510,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1699">
+            <rdf:Description rdf:about="#G_b0724">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/231675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS3800.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS64090.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100763190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/66841"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS17418.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173960"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173170,35 +180602,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0724" sboTerm="SBO:0000243" fbc:id="G_b0724" fbc:name="G_b0724" fbc:label="G_b0724">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0724">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002468"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945300"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH45"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173960"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0728" sboTerm="SBO:0000243" fbc:id="G_b0728" fbc:name="G_b0728" fbc:label="G_b0728">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -173302,7 +180705,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2464" sboTerm="SBO:0000243" fbc:id="G_b2464" fbc:name="G_b2464" fbc:label="G_b2464">
+      <fbc:geneProduct metaid="G_b0008" sboTerm="SBO:0000243" fbc:id="G_b0008" fbc:name="G_b0008" fbc:label="G_b0008">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173310,20 +180713,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2464">
+            <rdf:Description rdf:about="#G_b0008">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A867"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947006"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJK3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173307"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0008" sboTerm="SBO:0000243" fbc:id="G_b0008" fbc:name="G_b0008" fbc:label="G_b0008">
+      <fbc:geneProduct metaid="G_b2464" sboTerm="SBO:0000243" fbc:id="G_b2464" fbc:name="G_b2464" fbc:label="G_b2464">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173331,18 +180739,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0008">
+            <rdf:Description rdf:about="#G_b2464">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A870"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11556"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004730"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJK3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11797"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173475,7 +180878,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3137" sboTerm="SBO:0000243" fbc:id="G_b3137" fbc:name="G_b3137" fbc:label="G_b3137">
+      <fbc:geneProduct metaid="G_b2095" sboTerm="SBO:0000243" fbc:id="G_b2095" fbc:name="G_b2095" fbc:label="G_b2095">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173483,20 +180886,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3137">
+            <rdf:Description rdf:about="#G_b2095">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010307"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12768"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006934"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C8J8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12418"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2095" sboTerm="SBO:0000243" fbc:id="G_b2095" fbc:name="G_b2095" fbc:label="G_b2095">
+      <fbc:geneProduct metaid="G_b3137" sboTerm="SBO:0000243" fbc:id="G_b3137" fbc:name="G_b3137" fbc:label="G_b3137">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173504,13 +180907,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2095">
+            <rdf:Description rdf:about="#G_b3137">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006934"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C8J8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB74"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12768"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173741,7 +181144,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4407" sboTerm="SBO:0000243" fbc:id="G_b4407" fbc:name="G_b4407" fbc:label="G_b4407">
+      <fbc:geneProduct metaid="G_b3991" sboTerm="SBO:0000243" fbc:id="G_b3991" fbc:name="G_b3991" fbc:label="G_b3991">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173749,13 +181152,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4407">
+            <rdf:Description rdf:about="#G_b3991">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0023907"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/O32583"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847702"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30139"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11589"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173804,6 +181207,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4407" sboTerm="SBO:0000243" fbc:id="G_b4407" fbc:name="G_b4407" fbc:label="G_b4407">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4407">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0023907"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/O32583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14363"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2812" sboTerm="SBO:0000243" fbc:id="G_b2812" fbc:name="G_b2812" fbc:label="G_b2812">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -173811,7 +181235,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3991" sboTerm="SBO:0000243" fbc:id="G_b3991" fbc:name="G_b3991" fbc:label="G_b3991">
+      <fbc:geneProduct metaid="G_b0424" sboTerm="SBO:0000243" fbc:id="G_b0424" fbc:name="G_b0424" fbc:label="G_b0424">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173819,13 +181243,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3991">
+            <rdf:Description rdf:about="#G_b0424">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013050"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30139"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948493"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCB1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175987"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173853,7 +181277,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0424" sboTerm="SBO:0000243" fbc:id="G_b0424" fbc:name="G_b0424" fbc:label="G_b0424">
+      <fbc:geneProduct metaid="G_b2465" sboTerm="SBO:0000243" fbc:id="G_b2465" fbc:name="G_b2465" fbc:label="G_b2465">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173861,13 +181285,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0424">
+            <rdf:Description rdf:about="#G_b2465">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002818"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006287"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCB1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12100"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173895,7 +181319,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2465" sboTerm="SBO:0000243" fbc:id="G_b2465" fbc:name="G_b2465" fbc:label="G_b2465">
+      <fbc:geneProduct metaid="G_b0996" sboTerm="SBO:0000243" fbc:id="G_b0996" fbc:name="G_b0996" fbc:label="G_b0996">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -173903,13 +181327,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2465">
+            <rdf:Description rdf:about="#G_b0996">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008117"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33570"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945865"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11815"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -173937,27 +181361,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b0996" sboTerm="SBO:0000243" fbc:id="G_b0996" fbc:name="G_b0996" fbc:label="G_b0996">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b0996">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946252"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11815"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2827" sboTerm="SBO:0000243" fbc:id="G_b2827" fbc:name="G_b2827" fbc:label="G_b2827">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -174045,6 +181448,44 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1650" sboTerm="SBO:0000243" fbc:id="G_b1650" fbc:name="G_b1650" fbc:label="G_b1650">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1650">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046823"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1660" sboTerm="SBO:0000243" fbc:id="G_b1660" fbc:name="G_b1660" fbc:label="G_b1660">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b1660">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3919" sboTerm="SBO:0000243" fbc:id="G_b3919" fbc:name="G_b3919" fbc:label="G_b3919">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -174316,14 +181757,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1670" sboTerm="SBO:0000243" fbc:id="G_b1670" fbc:name="G_b1670" fbc:label="G_b1670">
+      <fbc:geneProduct metaid="G_b1671" sboTerm="SBO:0000243" fbc:id="G_b1671" fbc:name="G_b1671" fbc:label="G_b1671">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1671" sboTerm="SBO:0000243" fbc:id="G_b1671" fbc:name="G_b1671" fbc:label="G_b1671">
+      <fbc:geneProduct metaid="G_b1670" sboTerm="SBO:0000243" fbc:id="G_b1670" fbc:name="G_b1670" fbc:label="G_b1670">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -174568,13 +182009,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2304" sboTerm="SBO:0000243" fbc:id="G_b2304" fbc:name="G_b2304" fbc:label="G_b2304">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0759" sboTerm="SBO:0000243" fbc:id="G_b0759" fbc:name="G_b0759" fbc:label="G_b0759">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -174596,6 +182030,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2304" sboTerm="SBO:0000243" fbc:id="G_b2304" fbc:name="G_b2304" fbc:label="G_b2304">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0515" sboTerm="SBO:0000243" fbc:id="G_b0515" fbc:name="G_b0515" fbc:label="G_b0515">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -174885,7 +182326,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1006" sboTerm="SBO:0000243" fbc:id="G_b1006" fbc:name="G_b1006" fbc:label="G_b1006">
+      <fbc:geneProduct metaid="G_b2497" sboTerm="SBO:0000243" fbc:id="G_b2497" fbc:name="G_b2497" fbc:label="G_b2497">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -174893,20 +182334,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1006">
+            <rdf:Description rdf:about="#G_b2497">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003401"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75892"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946589"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGM7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12129"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2497" sboTerm="SBO:0000243" fbc:id="G_b2497" fbc:name="G_b2497" fbc:label="G_b2497">
+      <fbc:geneProduct metaid="G_b1006" sboTerm="SBO:0000243" fbc:id="G_b1006" fbc:name="G_b1006" fbc:label="G_b1006">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -174914,13 +182355,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2497">
+            <rdf:Description rdf:about="#G_b1006">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGM7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946978"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13853"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -174948,6 +182389,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b2682" sboTerm="SBO:0000243" fbc:id="G_b2682" fbc:name="G_b2682" fbc:label="G_b2682">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b2682">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76630"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13528"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2683" sboTerm="SBO:0000243" fbc:id="G_b2683" fbc:name="G_b2683" fbc:label="G_b2683">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -174969,7 +182431,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2682" sboTerm="SBO:0000243" fbc:id="G_b2682" fbc:name="G_b2682" fbc:label="G_b2682">
+      <fbc:geneProduct metaid="G_b1690" sboTerm="SBO:0000243" fbc:id="G_b1690" fbc:name="G_b1690" fbc:label="G_b1690">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -174977,20 +182439,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2682">
+            <rdf:Description rdf:about="#G_b1690">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76630"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045424"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4340" sboTerm="SBO:0000243" fbc:id="G_b4340" fbc:name="G_b4340" fbc:label="G_b4340">
+      <fbc:geneProduct metaid="G_b1803" sboTerm="SBO:0000243" fbc:id="G_b1803" fbc:name="G_b1803" fbc:label="G_b1803">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -174998,15 +182458,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4340">
+            <rdf:Description rdf:about="#G_b1803">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004839"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015421"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015422"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015424"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181R8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181R8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046180"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -175034,7 +182490,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4197" sboTerm="SBO:0000243" fbc:id="G_b4197" fbc:name="G_b4197" fbc:label="G_b4197">
+      <fbc:geneProduct metaid="G_b4340" sboTerm="SBO:0000243" fbc:id="G_b4340" fbc:name="G_b4340" fbc:label="G_b4340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175042,13 +182498,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4197">
+            <rdf:Description rdf:about="#G_b4340">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013732"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39305"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948712"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015421"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181R8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181R8"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -175076,6 +182534,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b4197" sboTerm="SBO:0000243" fbc:id="G_b4197" fbc:name="G_b4197" fbc:label="G_b4197">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b4197">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013732"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948712"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12497"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b2882" sboTerm="SBO:0000243" fbc:id="G_b2882" fbc:name="G_b2882" fbc:label="G_b2882">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -175162,27 +182641,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3577" sboTerm="SBO:0000243" fbc:id="G_b3577" fbc:name="G_b3577" fbc:label="G_b3577">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3577">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011690"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12281"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3579" sboTerm="SBO:0000243" fbc:id="G_b3579" fbc:name="G_b3579" fbc:label="G_b3579">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -175225,7 +182683,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3566" sboTerm="SBO:0000243" fbc:id="G_b3566" fbc:name="G_b3566" fbc:label="G_b3566">
+      <fbc:geneProduct metaid="G_b3577" sboTerm="SBO:0000243" fbc:id="G_b3577" fbc:name="G_b3577" fbc:label="G_b3577">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175233,13 +182691,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3566">
+            <rdf:Description rdf:about="#G_b3577">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011646"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37387"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12281"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -175267,6 +182725,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b3566" sboTerm="SBO:0000243" fbc:id="G_b3566" fbc:name="G_b3566" fbc:label="G_b3566">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_b3566">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20252"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b3568" sboTerm="SBO:0000243" fbc:id="G_b3568" fbc:name="G_b3568" fbc:label="G_b3568">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -175316,7 +182795,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2318" sboTerm="SBO:0000243" fbc:id="G_b2318" fbc:name="G_b2318" fbc:label="G_b2318">
+      <fbc:geneProduct metaid="G_b2165" sboTerm="SBO:0000243" fbc:id="G_b2165" fbc:name="G_b2165" fbc:label="G_b2165">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175324,23 +182803,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2318">
+            <rdf:Description rdf:about="#G_b2165">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001406"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CJ2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CJ2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12033"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2183" sboTerm="SBO:0000243" fbc:id="G_b2183" fbc:name="G_b2183" fbc:label="G_b2183">
+      <fbc:geneProduct metaid="G_b4022" sboTerm="SBO:0000243" fbc:id="G_b4022" fbc:name="G_b4022" fbc:label="G_b4022">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175348,7 +182824,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2183">
+            <rdf:Description rdf:about="#G_b4022">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000748"/>
@@ -175356,15 +182832,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006145"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018496"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188I9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188I9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188B7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188B7"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b4022" sboTerm="SBO:0000243" fbc:id="G_b4022" fbc:name="G_b4022" fbc:label="G_b4022">
+      <fbc:geneProduct metaid="G_b2183" sboTerm="SBO:0000243" fbc:id="G_b2183" fbc:name="G_b2183" fbc:label="G_b2183">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175372,7 +182848,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b4022">
+            <rdf:Description rdf:about="#G_b2183">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000748"/>
@@ -175380,15 +182856,15 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006145"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018496"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188B7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188B7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188I9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188I9"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3166" sboTerm="SBO:0000243" fbc:id="G_b3166" fbc:name="G_b3166" fbc:label="G_b3166">
+      <fbc:geneProduct metaid="G_b2318" sboTerm="SBO:0000243" fbc:id="G_b2318" fbc:name="G_b2318" fbc:label="G_b2318">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175396,17 +182872,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3166">
+            <rdf:Description rdf:about="#G_b2318">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CJ2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CJ2"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b2165" sboTerm="SBO:0000243" fbc:id="G_b2165" fbc:name="G_b2165" fbc:label="G_b2165">
+      <fbc:geneProduct metaid="G_b3166" sboTerm="SBO:0000243" fbc:id="G_b3166" fbc:name="G_b3166" fbc:label="G_b3166">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175414,19 +182896,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b2165">
+            <rdf:Description rdf:about="#G_b3166">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888587"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_b1973" sboTerm="SBO:0000243" fbc:id="G_b1973" fbc:name="G_b1973" fbc:label="G_b1973">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_b0949" sboTerm="SBO:0000243" fbc:id="G_b0949" fbc:name="G_b0949" fbc:label="G_b0949">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -175445,14 +182931,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1973" sboTerm="SBO:0000243" fbc:id="G_b1973" fbc:name="G_b1973" fbc:label="G_b1973">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b3352" sboTerm="SBO:0000243" fbc:id="G_b3352" fbc:name="G_b3352" fbc:label="G_b3352">
+      <fbc:geneProduct metaid="G_b1859" sboTerm="SBO:0000243" fbc:id="G_b1859" fbc:name="G_b1859" fbc:label="G_b1859">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175460,20 +182939,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b3352">
+            <rdf:Description rdf:about="#G_b1859">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIC2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12368"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_b1859" sboTerm="SBO:0000243" fbc:id="G_b1859" fbc:name="G_b1859" fbc:label="G_b1859">
+      <fbc:geneProduct metaid="G_b3352" sboTerm="SBO:0000243" fbc:id="G_b3352" fbc:name="G_b3352" fbc:label="G_b3352">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -175481,13 +182960,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_b1859">
+            <rdf:Description rdf:about="#G_b3352">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39832"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946372"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIC2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174898"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
diff --git a/carveme/data/benchmark/models/mgen.xml b/carveme/data/benchmark/models/mgen.xml
index 69f1864..6dd4beb 100644
--- a/carveme/data/benchmark/models/mgen.xml
+++ b/carveme/data/benchmark/models/mgen.xml
@@ -3,7 +3,7 @@
   <model metaid="mgen" id="mgen" fbc:strict="true">
     <notes>
       <html xmlns="http://www.w3.org/1999/xhtml">
-        <p>Description: This model was built with CarveMe version 1.4.1</p>
+        <p>Description: This model was built with CarveMe version 1.5.0</p>
       </html>
     </notes>
     <listOfCompartments>
@@ -63,6 +63,86 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_12dgr180_c" sboTerm="SBO:0000247" id="M_12dgr180_c" name="1,2-Diacyl-sn-glycerol (dioctadecanoyl, n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C39H76O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H76O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr180_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4217"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_12dgr180_p" sboTerm="SBO:0000247" id="M_12dgr180_p" name="1,2-Diacyl-sn-glycerol (dioctadecanoyl, n-C18:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C39H76O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H76O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr180_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4217"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_12dgr181_c" sboTerm="SBO:0000247" id="M_12dgr181_c" name="1,2-Diacyl-sn-glycerol (dioctadec-11-enoyl, n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C39H72O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H72O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr181_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3775"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_12dgr181_p" sboTerm="SBO:0000247" id="M_12dgr181_p" name="1,2-Diacyl-sn-glycerol (dioctadec-11-enoyl, n-C18:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C39H72O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H72O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr181_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3775"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_13dpg_c" sboTerm="SBO:0000247" id="M_13dpg_c" name="3-Phospho-D-glyceroyl phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C3H4O10P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115,6 +195,57 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_1hdecg3p_p" sboTerm="SBO:0000247" id="M_1hdecg3p_p" name="1-hexadecanoyl-sn-glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C19H37O7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H37O7P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_1hdecg3p_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15327"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_23dhmp_c" sboTerm="SBO:0000247" id="M_23dhmp_c" name="(R)-2,3-Dihydroxy-3-methylpentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H11O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_23dhmp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1-KETO-2-METHYLVALERATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1202"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PDGXJDXVGMHUIR-UJURSFKZSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19046"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2agpe181_c" sboTerm="SBO:0000247" id="M_2agpe181_c" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C23H46NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -319,48 +450,71 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_2agpg180_c" sboTerm="SBO:0000247" id="M_2agpg180_c" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C24H48O9P">
+      <species metaid="M_2agpg181_c" sboTerm="SBO:0000247" id="M_2agpg181_c" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C24H46O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C24H48O9P</p>
+            <p>FORMULA: C24H46O9P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2agpg181_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3455"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2agpg181_p" sboTerm="SBO:0000247" id="M_2agpg181_p" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C24H46O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C24H46O9P</p>
+            <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
-            <p>CHARGE: -1.0</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_2agpg180_c">
+            <rdf:Description rdf:about="#M_2agpg181_p">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB61703"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM150642"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZYKIFISVQNGKFE-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3455"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_2agpg180_p" sboTerm="SBO:0000247" id="M_2agpg180_p" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C24H48O9P">
+      <species metaid="M_2ahbut_c" sboTerm="SBO:0000247" id="M_2ahbut_c" name="(S)-2-Aceto-2-hydroxybutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H9O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C24H48O9P</p>
+            <p>FORMULA: C6H9O4</p>
             <p>SBOTerm: SBO:0000247</p>
             <p>CHARGE: -1.0</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_2agpg180_p">
+            <rdf:Description rdf:about="#M_2ahbut_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB61703"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM150642"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZYKIFISVQNGKFE-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06854"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06900"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-ACETO-2-HYDROXY-BUTYRATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM114220"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VUQLHQFKACOHNZ-LURJTMIESA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19045"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -498,6 +652,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2kmb_c" sboTerm="SBO:0000247" id="M_2kmb_c" name="2-keto-4-methylthiobutyrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H7O3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3S</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_2kmb_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1237122"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01060170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM276"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SXFSQZDSUWACKX-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00869"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2mb_p_c" sboTerm="SBO:0000247" id="M_2mb_p_c" name="2 methylbutanoyl p" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9O5P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -675,6 +865,36 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_2mpdhl_c" sboTerm="SBO:0000247" id="M_2mpdhl_c" name="S-(2-Methylpropanoyl)-dihydrolipoamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H22NO2S2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22NO2S2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2mpdhl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA08010022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7749"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UEFURMXXHJCLJP-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02700"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2obut_c" sboTerm="SBO:0000247" id="M_2obut_c" name="2-Oxobutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -811,6 +1031,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_34hpp_c" sboTerm="SBO:0000247" id="M_34hpp_c" name="3-(4-Hydroxyphenyl)pyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H7O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34hpp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-31365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11725"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11727"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:594665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00707"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KKADPXVIOXHVKN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:P-HYDROXY-PHENYLPYRUVATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00868"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3dhq_c" sboTerm="SBO:0000247" id="M_3dhq_c" name="3-Dehydroquinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H9O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -880,55 +1136,50 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_3hmrsACP_c" sboTerm="SBO:0000247" id="M_3hmrsACP_c" name="(R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C398H629N96O144PS3">
+      <species metaid="M_3hmop_c" sboTerm="SBO:0000247" id="M_3hmop_c" name="(R)-3-Hydroxy-3-methyl-2-oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C398H629N96O144PS3</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C6H9O4</p>
+            <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_3hmrsACP_c">
+            <rdf:Description rdf:about="#M_3hmop_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:R-3-hydroxymyristoyl-ACPs"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7733"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C14463"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:34008"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050457"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM114594"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YJVOWRAWFXRESP-ZCFIWIBFSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10162"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_3htdcoa_c" sboTerm="SBO:0000247" id="M_3htdcoa_c" name="(S)-3-Hydroxytetradecanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C35H58N7O18P3S">
+      <species metaid="M_3hmrsACP_c" sboTerm="SBO:0000247" id="M_3hmrsACP_c" name="(R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C398H629N96O144PS3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C35H58N7O18P3S</p>
-            <p>CHARGE: -4</p>
+            <p>FORMULA: C398H629N96O144PS3</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_3htdcoa_c">
+            <rdf:Description rdf:about="#M_3hmrsACP_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-77276"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18754"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27466"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62614"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03934"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2171"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM767"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OXBHKMHNDGRDCZ-STLSENOWSA-J"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:R-3-hydroxymyristoyl-ACPs"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11484"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -1193,41 +1444,6 @@
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         </annotation>
       </species>
-      <species metaid="M_5aop_c" sboTerm="SBO:0000247" id="M_5aop_c" name="5-Amino-4-oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H9NO3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H9NO3</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_5aop_c">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00430"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12109"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:132970"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:356416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07567"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01149"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01100055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:5-AMINO-LEVULINATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM405"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZGXJTSGNIOSYLO-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00338"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_5fthf_c" sboTerm="SBO:0000247" id="M_5fthf_c" name="5-Formyltetrahydrofolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C20H21N7O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1263,6 +1479,60 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5mthf_c" sboTerm="SBO:0000247" id="M_5mthf_c" name="5-Methyltetrahydrofolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C20H24N7O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C20H24N7O6</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5mthf_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-200665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-200709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:136009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D09353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:5-METHYL-THF"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM318"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZNOVTXRBGFNYRX-STQMWFEESA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00345"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_6pgg_c" sboTerm="SBO:0000247" id="M_6pgg_c" name="6-Phospho-beta-D-glucosyl-(1,4)-D-glucose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H21O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H21O14P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6pgg_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147389"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ACP_c" sboTerm="SBO:0000247" id="M_ACP_c" name="Acyl carrier protein" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C384H603N96O142PS3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1495,46 +1765,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_ac_e" sboTerm="SBO:0000247" id="M_ac_e" name="Acetate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C2H3O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C2H3O2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15366"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40486"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACET"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM26"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QTBSBXVTEAMEQO-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00029"/>
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1667,6 +1897,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_acgam1p_e" sboTerm="SBO:0000247" id="M_acgam1p_e" name="N-Acetyl-D-glucosamine 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H14NO9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H14NO9P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acgam1p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-532204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7125"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FZLJPEPAYPUMMR-RTRLPJTCSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01367"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02611"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_acgam6p_c" sboTerm="SBO:0000247" id="M_acgam6p_c" name="N-Acetyl-D-glucosamine 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H14NO9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1742,6 +1998,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_acmana_c" sboTerm="SBO:0000247" id="M_acmana_c" name="N-Acetyl-D-mannosamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H15NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acmana_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-4085214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7141"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62724"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MBLBDJOUHNCFQT-XAMCCFCMSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-acetyl-D-mannosamine"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2403"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00492"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_acmana_e" sboTerm="SBO:0000247" id="M_acmana_e" name="N-Acetyl-D-mannosamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2020,46 +2309,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_adn_e" sboTerm="SBO:0000247" id="M_adn_e" name="Adenosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C10H13N5O4</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_adn_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83909"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8857850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00212"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13734"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16335"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22237"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2472"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40558"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40825"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40911"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00050"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB04401"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB04402"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB04421"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADENOSINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM212"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OIRDTQYFTABQOQ-KQYNXXCUSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00182"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_adp_c" sboTerm="SBO:0000247" id="M_adp_c" name="ADP C10H12N5O10P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2216,47 +2465,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_akg_e" sboTerm="SBO:0000247" id="M_akg_e" name="2-Oxoglutarate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H4O5">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H4O5</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_akg_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113594"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113671"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29406"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-389537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5278317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-561075"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1253"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16810"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40661"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02812"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62781"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KPGXRSRHYNQIFN-UHFFFAOYSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-KETOGLUTARATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00024"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ala_L_asp__L_c" sboTerm="SBO:0000247" id="M_ala_L_asp__L_c" name="Ala L asp L C7H11N2O5" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H11N2O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2418,43 +2626,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_ala__D_e" sboTerm="SBO:0000247" id="M_ala__D_e" name="D-Alanine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H7NO2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C3H7NO2</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ala__D_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10840"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12899"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15570"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20893"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32435"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32436"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4087"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41756"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41848"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01310"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-ALANINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM156"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QNAYBMKLOCPYGJ-UWTATZPHSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00117"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ala__D_p" sboTerm="SBO:0000247" id="M_ala__D_p" name="D-Alanine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H7NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2772,6 +2943,31 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_alpro_c" sboTerm="SBO:0000247" id="M_alpro_c" name="S Aminomethyldihydrolipoylprotein CH6NS2X" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H20N2OS2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H20N2OS2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_alpro_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM81221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11830"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_amet_c" sboTerm="SBO:0000247" id="M_amet_c" name="S-Adenosyl-L-methionine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C15H23N6O5S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2865,6 +3061,55 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_amp_e" sboTerm="SBO:0000247" id="M_amp_e" name="AMP C10H12N5O7P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H12N5O7P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_amp_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-389620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:456215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMP-GROUP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM14"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UDMBCSSLTHHNCD-KQYNXXCUSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd22272"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_apoACP_c" sboTerm="SBO:0000247" id="M_apoACP_c" name="Apoprotein [acyl carrier protein]" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C373H582N94O136S2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3236,55 +3481,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_asp__L_e" sboTerm="SBO:0000247" id="M_asp__L_e" name="L-Aspartate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C4H6NO4</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_asp__L_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00049"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13085"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:132943"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21247"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22659"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29992"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35391"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40853"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40900"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40942"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6193"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CKLJMWTZIZZHCS-REOHCLBHSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00191"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-ASPARTATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM42"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19181"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_asp__L_p" sboTerm="SBO:0000247" id="M_asp__L_p" name="L-Aspartate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3887,6 +4083,29 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cdpdodec11eg_c" sboTerm="SBO:0000247" id="M_cdpdodec11eg_c" name="CDP-1,2-dioctadec-11-enoylglycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C48H83N3O15P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C48H83N3O15P2</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cdpdodec11eg_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:104362"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KISJWPWNABZPGN-IGIWICMZSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15420"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cdpdodecg_c" sboTerm="SBO:0000247" id="M_cdpdodecg_c" name="CDP-1,2-dioctadecanoylglycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C48H87N3O15P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3935,6 +4154,25 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cell4_p" sboTerm="SBO:0000247" id="M_cell4_p" name="Cellulose (n=4 repeating units)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C24H42O21">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C24H42O21</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cell4_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147063"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cellb_c" sboTerm="SBO:0000247" id="M_cellb_c" name="Cellobiose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4001,6 +4239,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cellb_p" sboTerm="SBO:0000247" id="M_cellb_p" name="Cellobiose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cellb_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06421"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00289"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUBGYTABKSRVRQ-QRZGKKJRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CELLOBIOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cgly_c" sboTerm="SBO:0000247" id="M_cgly_c" name="Cys Gly C5H10N2O3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4091,6 +4362,78 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_chol_c" sboTerm="SBO:0000247" id="M_chol_c" name="Choline C5H14NO" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C5H14NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H14NO</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-264618"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-264638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6798162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:72322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D10498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OEYIOHPDSNJKLS-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00098"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_chol_e" sboTerm="SBO:0000247" id="M_chol_e" name="Choline C5H14NO" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C5H14NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H14NO</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chol_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-264618"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-264638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6798162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:72322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D10498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OEYIOHPDSNJKLS-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00098"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_chor_c" sboTerm="SBO:0000247" id="M_chor_c" name="Chorismate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H8O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4345,6 +4688,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_clpn180_p" sboTerm="SBO:0000247" id="M_clpn180_p" name="Cardiolipin (tetraoctadecanoyl, n-C18:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C81H156O17P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C81H156O17P2</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_clpn180_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5079"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cmp_c" sboTerm="SBO:0000247" id="M_cmp_c" name="CMP C9H12N3O8P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4386,6 +4749,47 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cmp_e" sboTerm="SBO:0000247" id="M_cmp_e" name="CMP C9H12N3O8P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H12N3O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cmp_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1524067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-727810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58120"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00095"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IERHLVCPSMICTF-XVFCMESISA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CMP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM31"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00046"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_co2_c" sboTerm="SBO:0000247" id="M_co2_c" name="CO2 CO2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4472,6 +4876,49 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_co2_p" sboTerm="SBO:0000247" id="M_co2_p" name="CO2 CO2" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_co2_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1132345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1237009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159751"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159942"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-389536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5668565"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48829"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CURLTUGMZLYLDI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBON-DIOXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00011"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_coa_c" sboTerm="SBO:0000247" id="M_coa_c" name="Coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C21H32N7O16P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4800,91 +5247,6 @@
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         </annotation>
       </species>
-      <species metaid="M_cys__L_e" sboTerm="SBO:0000247" id="M_cys__L_e" name="L-Cysteine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C3H7NO2S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_cys__L_e">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-352016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379721"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5668576"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13095"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32458"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35237"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41768"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41781"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41811"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6207"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CYS"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM55"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XUJNEKJLAYXESH-REOHCLBHSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00547"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_cyst__L_c" sboTerm="SBO:0000247" id="M_cyst__L_c" name="L-Cystathionine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H14N2O4S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_cyst__L_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1614518"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02291"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17482"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00099"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-CYSTATHIONINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19019"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_cytd_c" sboTerm="SBO:0000247" id="M_cytd_c" name="Cytidine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4919,40 +5281,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_cytd_e" sboTerm="SBO:0000247" id="M_cytd_e" name="Cytidine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C9H13N3O5</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_cytd_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17562"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41649"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41686"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CYTIDINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM338"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UHDGCWIWMRVCDJ-XVFCMESISA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00367"/>
-                </rdf:Bag>
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-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_dad_2_c" sboTerm="SBO:0000247" id="M_dad_2_c" name="Deoxyadenosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4988,41 +5316,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_dad_2_e" sboTerm="SBO:0000247" id="M_dad_2_e" name="Deoxyadenosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C10H13N5O3</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_dad_2_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14112"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17256"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40535"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40565"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4405"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB05778"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYADENOSINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM625"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OLXZPDWKRNYJJZ-RRKCRQDMSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00438"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_dadp_c" sboTerm="SBO:0000247" id="M_dadp_c" name="DADP C10H12N5O9P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O9P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5280,6 +5573,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ddca_e" sboTerm="SBO:0000247" id="M_ddca_e" name="Dodecanoate (n-C12:0)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C12H23O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H23O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ddca_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162258"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ddca_p" sboTerm="SBO:0000247" id="M_ddca_p" name="Dodecanoate (n-C12:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C12H23O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5300,6 +5613,41 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ddcacoa_c" sboTerm="SBO:0000247" id="M_ddcacoa_c" name="Dodecanoyl-CoA (n-C12:0CoA)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C33H54N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33H54N7O17P3S</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ddcacoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-77261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01832"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LAUROYLCOA-CPD"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM363"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YMCXGHLSVALICC-GMHMEAMDSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01260"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dgal6p_c" sboTerm="SBO:0000247" id="M_dgal6p_c" name="D-Galactose 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H11O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5484,6 +5832,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dha_e" sboTerm="SBO:0000247" id="M_dha_e" name="Dihydroxyacetone" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dha_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYACETONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM460"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RXKJFZQQPQGTFL-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00157"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhap_c" sboTerm="SBO:0000247" id="M_dhap_c" name="Dihydroxyacetone phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5586,6 +5965,31 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhlpro_c" sboTerm="SBO:0000247" id="M_dhlpro_c" name="Dihydrolipolprotein H2S2X" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H16NOS2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H16NOS2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhlpro_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd12225"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhna_c" sboTerm="SBO:0000247" id="M_dhna_c" name="1,4-Dihydroxy-2-naphthoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6604,6 +7008,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fe3pyovd_kt_e" sboTerm="SBO:0000247" id="M_fe3pyovd_kt_e" name="Ferrypyoverdine  P putida KT2440 specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27FeH48N10O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27FeH48N10O15</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_fe3pyovd_kt_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_fmn_c" sboTerm="SBO:0000247" id="M_fmn_c" name="FMN C17H19N4O9P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C17H21N4O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7010,6 +7431,111 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_g3pc_c" sboTerm="SBO:0000247" id="M_g3pc_c" name="Sn-Glycero-3-phosphocholine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H20NO6P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1498750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:55397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:76433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-1-GLYCERO-PHOSPHORYLCHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM367"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SUHOQUVVVLNYQR-MRVPVSSYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3pc_e" sboTerm="SBO:0000247" id="M_g3pc_e" name="Sn-Glycero-3-phosphocholine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H20NO6P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1498750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:55397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:76433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-1-GLYCERO-PHOSPHORYLCHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM367"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SUHOQUVVVLNYQR-MRVPVSSYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3pc_p" sboTerm="SBO:0000247" id="M_g3pc_p" name="Sn-Glycero-3-phosphocholine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H20NO6P</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pc_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1498750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:55397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:76433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-1-GLYCERO-PHOSPHORYLCHOLINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM367"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SUHOQUVVVLNYQR-MRVPVSSYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_g3pe_c" sboTerm="SBO:0000247" id="M_g3pe_c" name="Sn-Glycero-3-phosphoethanolamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7181,6 +7707,183 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_g3pi_c" sboTerm="SBO:0000247" id="M_g3pi_c" name="Sn-Glycero-3-phospho-1-inositol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H18O11P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H18O11P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pi_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6813734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BMVUIWJCUQSHLZ-UJGXJMNGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00902"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3pi_e" sboTerm="SBO:0000247" id="M_g3pi_e" name="Sn-Glycero-3-phospho-1-inositol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H18O11P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H18O11P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pi_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6813734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BMVUIWJCUQSHLZ-UJGXJMNGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00902"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3pi_p" sboTerm="SBO:0000247" id="M_g3pi_p" name="Sn-Glycero-3-phospho-1-inositol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H18O11P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H18O11P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pi_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6813734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BMVUIWJCUQSHLZ-UJGXJMNGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00902"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3ps_c" sboTerm="SBO:0000247" id="M_g3ps_c" name="Glycerophosphoserine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H13NO8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13NO8P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3ps_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97117"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZWZWYGMENQVNFU-UHNVWZDZSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15468"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3ps_e" sboTerm="SBO:0000247" id="M_g3ps_e" name="Glycerophosphoserine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H13NO8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13NO8P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3ps_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97117"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZWZWYGMENQVNFU-UHNVWZDZSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15468"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3ps_p" sboTerm="SBO:0000247" id="M_g3ps_p" name="Glycerophosphoserine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H13NO8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13NO8P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3ps_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM97117"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZWZWYGMENQVNFU-UHNVWZDZSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15468"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_g6p_A_c" sboTerm="SBO:0000247" id="M_g6p_A_c" name="Alpha-D-glucose 6 phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H11O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7839,38 +8542,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_glu__D_c" sboTerm="SBO:0000247" id="M_glu__D_c" name="D-Glutamate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H8NO4">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H8NO4</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_glu__D_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12979"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15966"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29989"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-GLT"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM331"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WHUUTDBJXJRKMK-GSVOUGTGSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00186"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_glu__L_c" sboTerm="SBO:0000247" id="M_glu__L_c" name="L-Glutamate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H8NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8505,7 +9176,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_glyc3p_e" sboTerm="SBO:0000247" id="M_glyc3p_e" name="Glycerol 3-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H7O6P">
+      <species metaid="M_glyc3p_p" sboTerm="SBO:0000247" id="M_glyc3p_p" name="Glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H7O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C3H7O6P</p>
@@ -8515,7 +9186,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_glyc3p_e">
+            <rdf:Description rdf:about="#M_glyc3p_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188458"/>
@@ -8540,42 +9211,41 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_glyc3p_p" sboTerm="SBO:0000247" id="M_glyc3p_p" name="Glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H7O6P">
+      <species metaid="M_glyc_c" sboTerm="SBO:0000247" id="M_glyc_c" name="Glycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C3H7O6P</p>
-            <p>CHARGE: -2</p>
+            <p>FORMULA: C3H8O3</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_glyc3p_p">
+            <rdf:Description rdf:about="#M_glyc_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188458"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76114"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AWUCVROLDVIAJX-GSVOUGTGSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10648"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12848"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15978"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26705"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57597"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLYCEROL-3P"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM66"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-192438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:131422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17754"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLYCEROL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89612"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PEDCQBHIVMGVHV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00100"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_glyc_c" sboTerm="SBO:0000247" id="M_glyc_c" name="Glycerol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O3">
+      <species metaid="M_glyc_e" sboTerm="SBO:0000247" id="M_glyc_e" name="Glycerol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C3H8O3</p>
@@ -8585,7 +9255,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_glyc_c">
+            <rdf:Description rdf:about="#M_glyc_e">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-192438"/>
@@ -8609,7 +9279,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_glyc_e" sboTerm="SBO:0000247" id="M_glyc_e" name="Glycerol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O3">
+      <species metaid="M_glyc_p" sboTerm="SBO:0000247" id="M_glyc_p" name="Glycerol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C3H8O3</p>
@@ -8619,7 +9289,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_glyc_e">
+            <rdf:Description rdf:about="#M_glyc_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-192438"/>
@@ -8861,39 +9531,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_gsn_e" sboTerm="SBO:0000247" id="M_gsn_e" name="Guanosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O5">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C10H13N5O5</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_gsn_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00387"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14375"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24444"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42840"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42847"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:471737"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5564"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GUANOSINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM401"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NYHBQMYGNKIUIF-UUOKFMHZSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00311"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_gthox_c" sboTerm="SBO:0000247" id="M_gthox_c" name="Oxidized glutathione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C20H30N6O12S2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9296,7 +9933,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_h2o_p" sboTerm="SBO:0000247" id="M_h2o_p" name="H2O H2O" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H2O">
+      <species metaid="M_h2o_e" sboTerm="SBO:0000247" id="M_h2o_e" name="H2O H2O" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H2O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: H2O</p>
@@ -9306,7 +9943,7 @@
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@@ -9365,49 +10002,76 @@
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+      <species metaid="M_h2o_p" sboTerm="SBO:0000247" id="M_h2o_p" name="H2O H2O" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H2O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: H2S</p>
+            <p>FORMULA: H2O</p>
+            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
-            <p>CHARGE: 0.0</p>
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+            <rdf:Description rdf:about="#M_h2o_p">
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D06322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02111"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HYDROXYL-GROUP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:OH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:OXONIUM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:WATER"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XLYOFNOQVPJJNP-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27222"/>
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+      <species metaid="M_h2s_c" sboTerm="SBO:0000247" id="M_h2s_c" name="Hydrogen sulfide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: H2S</p>
@@ -9417,7 +10081,7 @@
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-            <rdf:Description rdf:about="#M_h2s_e">
+            <rdf:Description rdf:about="#M_h2s_c">
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@@ -9449,7 +10113,7 @@
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+      <species metaid="M_h2s_e" sboTerm="SBO:0000247" id="M_h2s_e" name="Hydrogen sulfide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: H2S</p>
@@ -9459,7 +10123,7 @@
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-            <rdf:Description rdf:about="#M_h2s_p">
+            <rdf:Description rdf:about="#M_h2s_e">
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                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1614532"/>
@@ -9776,6 +10440,53 @@
           </rdf:RDF>
         </annotation>
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+      <species metaid="M_hdca_p" sboTerm="SBO:0000247" id="M_hdca_p" name="Hexadecanoate (n-C16:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C16H31O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H31O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hdca_p">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14730"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:231736"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05341"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60083"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IPCSVZSSVZVIGE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PALMITATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00214"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hdcea_c" sboTerm="SBO:0000247" id="M_hdcea_c" name="Hexadecenoate (n-C16:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C16H29O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9939,37 +10650,6 @@
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         </annotation>
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-      <species metaid="M_hx2coa_c" sboTerm="SBO:0000247" id="M_hx2coa_c" name="Trans-Hex-2-enoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C27H40N7O17P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C27H40N7O17P3S</p>
-            <p>CHARGE: -4</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03125"/>
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10001,26 +10681,6 @@
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-      <species metaid="M_hxcoa_c" sboTerm="SBO:0000247" id="M_hxcoa_c" name="Hexanoyl-CoA (n-C6:0CoA)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C27H42N7O17P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C27H42N7O17P3S</p>
-            <p>CHARGE: -4</p>
-            <p>SBOTerm: SBO:0000247</p>
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-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10146,48 +10806,6 @@
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C6H13NO2</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
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-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11135,6 +11672,32 @@
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+      <species metaid="M_lpro_c" sboTerm="SBO:0000247" id="M_lpro_c" name="Lipoylprotein S2X" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H14NOS2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H14NOS2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_lpro_c">
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+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14523"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd12005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27417"/>
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+            </rdf:Description>
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+      </species>
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11181,6 +11744,52 @@
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         </annotation>
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+      <species metaid="M_lys__L_e" sboTerm="SBO:0000247" id="M_lys__L_e" name="L-Lysine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C6H15N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H15N2O2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_lys__L_e">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00047"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02304"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LYS"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM78"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19182"/>
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+            </rdf:Description>
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+        </annotation>
+      </species>
       <species metaid="M_lysglugly_c" sboTerm="SBO:0000247" id="M_lysglugly_c" name="Lysine-glutamine-glycine tripeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C13H26N4O7">
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@@ -11359,42 +11968,6 @@
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-        <notes>
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@@ -11841,33 +12414,6 @@
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-        <notes>
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-            <p>SBOTerm: SBO:0000247</p>
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         <notes>
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@@ -11899,37 +12445,6 @@
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-        <notes>
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       <species metaid="M_mg2_c" sboTerm="SBO:0000247" id="M_mg2_c" name="Magnesium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Mg">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12151,37 +12666,6 @@
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-      <species metaid="M_mnl1p_e" sboTerm="SBO:0000247" id="M_mnl1p_e" name="D-Mannitol 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C6H13O9P</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_mnl1p_e">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16298"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4205"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61381"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MANNITOL-1P"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00491"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27436"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_mnl_e" sboTerm="SBO:0000247" id="M_mnl_e" name="D-Mannitol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12312,26 +12796,6 @@
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-      <species metaid="M_myrsACP_c" sboTerm="SBO:0000247" id="M_myrsACP_c" name="Myristoyl-ACP (n-C14:0ACP)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C398H629N96O143PS3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C398H629N96O143PS3</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_myrsACP_c">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89779"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_nac_c" sboTerm="SBO:0000247" id="M_nac_c" name="Nicotinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12565,6 +13029,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ncam_e" sboTerm="SBO:0000247" id="M_ncam_e" name="Nicotinamide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H6N2O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H6N2O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ncam_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-197277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8870343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00036"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DFPAKSUCGFBDDF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NIACINAMIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM216"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00133"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_nh4_c" sboTerm="SBO:0000247" id="M_nh4_c" name="Ammonium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12679,6 +13176,63 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nh4_p" sboTerm="SBO:0000247" id="M_nh4_p" name="Ammonium" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H4N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nh4_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1132163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-140912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2022135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-31633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-389843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:135980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB41827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIUM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM15"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QGZKDVFQNNGYKY-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19013"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ni2_c" sboTerm="SBO:0000247" id="M_ni2_c" name="Nickel" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Ni">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12883,6 +13437,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_no2_e" sboTerm="SBO:0000247" id="M_no2_e" name="Nitrite" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_no2_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1222379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02786"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IOVCWXUNBOPUCH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITRITE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00075"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_no2_p" sboTerm="SBO:0000247" id="M_no2_p" name="Nitrite" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_no2_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1222379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02786"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IOVCWXUNBOPUCH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITRITE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00075"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_o2_c" sboTerm="SBO:0000247" id="M_o2_c" name="O2 O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13069,74 +13685,6 @@
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         </annotation>
       </species>
-      <species metaid="M_ocdca_c" sboTerm="SBO:0000247" id="M_ocdca_c" name="Octadecanoate (n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C18H35O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C18H35O2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ocdca_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-428198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:231588"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25631"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00827"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01010047"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:STEARIC_ACID"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM236"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QIQXTHQIDYTFRH-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01080"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
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-      </species>
-      <species metaid="M_ocdca_p" sboTerm="SBO:0000247" id="M_ocdca_p" name="Octadecanoate (n-C18:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C18H35O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C18H35O2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ocdca_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-428198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:231588"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45710"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01080"/>
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-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ocdcea_c" sboTerm="SBO:0000247" id="M_ocdcea_c" name="Octadecenoate (n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C18H33O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13445,6 +13993,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pa160_p" sboTerm="SBO:0000247" id="M_pa160_p" name="1,2-dihexadecanoyl-sn-glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C35H67O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H67O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa160_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:72859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:73246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB07857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP10010027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM17312"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PORPENFLTBBHSG-MGBGTMOVSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26147"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pa180_c" sboTerm="SBO:0000247" id="M_pa180_c" name="1,2-dioctadecanoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C39H75O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13472,6 +14049,75 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pa180_p" sboTerm="SBO:0000247" id="M_pa180_p" name="1,2-dioctadecanoyl-sn-glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C39H75O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H75O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa180_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:82921"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:83774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMGP10010028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM51279"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YFWHNAWEOZTIPI-DIPNUNPCSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26148"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pa181_c" sboTerm="SBO:0000247" id="M_pa181_c" name="1,2-dioctadec-11-enoyl-sn-glycerol 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C39H71O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H71O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa181_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15527"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pa181_p" sboTerm="SBO:0000247" id="M_pa181_p" name="1,2-dioctadec-11-enoyl-sn-glycerol 3-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C39H71O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H71O8P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pa181_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15527"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_palmACP_c" sboTerm="SBO:0000247" id="M_palmACP_c" name="Palmitoyl-ACP (n-C16:0ACP)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C400H633N96O143PS3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14017,6 +14663,73 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pg181_c" sboTerm="SBO:0000247" id="M_pg181_c" name="Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C42H78O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42H78O10P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pg181_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-18396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1773"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pg181_p" sboTerm="SBO:0000247" id="M_pg181_p" name="Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C42H78O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42H78O10P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pg181_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-18396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1773"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pgp180_c" sboTerm="SBO:0000247" id="M_pgp180_c" name="Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H81O13P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42H81O13P2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -3.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pgp180_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM75104"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UZNYMWWMHBZMLI-IOLBBIBUSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd23598"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_phe__L_c" sboTerm="SBO:0000247" id="M_phe__L_c" name="L-Phenylalanine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H11NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14127,37 +14840,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_phpyr_c" sboTerm="SBO:0000247" id="M_phpyr_c" name="Phenylpyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C9H7O3</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_phpyr_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BTNMPGBKDVTSJY-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00166"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12821"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18005"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26007"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00205"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01237"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PHENYL-PYRUVATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162242"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00143"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_pi_c" sboTerm="SBO:0000247" id="M_pi_c" name="Phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="HO4P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14644,6 +15326,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pqq_c" sboTerm="SBO:0000247" id="M_pqq_c" name="Pyrroloquinoline-quinone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H2N2O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H2N2O8</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -4.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pqq_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58442"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PQQ"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MMXZSJMASHPLLR-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00097"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_pqqh2_c" sboTerm="SBO:0000247" id="M_pqqh2_c" name="Reduced pyrroloquinoline-quinone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C14H4N2O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H4N2O8</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pqqh2_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM765"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QZMUBZJJJKIXKV-UHFFFAOYSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00986"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pro__L_c" sboTerm="SBO:0000247" id="M_pro__L_c" name="L-Proline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H9NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -15002,6 +15746,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pyovd_kt_e" sboTerm="SBO:0000247" id="M_pyovd_kt_e" name="Pyoverdine  P putida specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H48N10O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H48N10O15</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_pyovd_kt_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
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       <species metaid="M_pyr_c" sboTerm="SBO:0000247" id="M_pyr_c" name="Pyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H3O3">
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@@ -15663,6 +16358,56 @@
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+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
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+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26833"/>
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+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
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+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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@@ -16048,90 +16793,6 @@
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@@ -17235,56 +17855,6 @@
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6310"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00929"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB30396"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM94"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QIVBCDIJIAJPQS-VIFPVBQESA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19007"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ttdca_c" sboTerm="SBO:0000247" id="M_ttdca_c" name="Tetradecanoate (n-C14:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C14H27O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17305,26 +17875,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_ttdca_e" sboTerm="SBO:0000247" id="M_ttdca_e" name="Tetradecanoate (n-C14:0)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C14H27O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C14H27O2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ttdca_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162239"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ttdca_p" sboTerm="SBO:0000247" id="M_ttdca_p" name="Tetradecanoate (n-C14:0)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C14H27O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17775,6 +18325,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_udpacgal_c" sboTerm="SBO:0000247" id="M_udpacgal_c" name="UDP-N-acetyl-D-galactosamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C17H25N3O17P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C17H25N3O17P2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_udpacgal_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-735700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16650"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10611"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LFTYTUAZOPRMMI-LDDHHVEYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UDP-N-ACETYL-GALACTOSAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00175"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_udpg_c" sboTerm="SBO:0000247" id="M_udpg_c" name="UDPglucose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18417,6 +18999,54 @@
       <parameter id="cobra_0_bound" value="0" constant="true"/>
     </listOfParameters>
     <listOfReactions>
+      <reaction metaid="R_12DGR180tipp" sboTerm="SBO:0000185" id="R_12DGR180tipp" name="1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_12DGR180tipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94680"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr180_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr180_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_12DGR181tipp" sboTerm="SBO:0000185" id="R_12DGR181tipp" name="1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_12DGR181tipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94681"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr181_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2AGPE181tipp" sboTerm="SBO:0000185" id="R_2AGPE181tipp" name="2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18565,7 +19195,7 @@
           <speciesReference species="M_2agpg161_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_2AGPG180tipp" sboTerm="SBO:0000185" id="R_2AGPG180tipp" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_2AGPG181tipp" sboTerm="SBO:0000185" id="R_2AGPG181tipp" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -18573,20 +19203,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_2AGPG180tipp">
+            <rdf:Description rdf:about="#R_2AGPG181tipp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94770"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_2agpg180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2agpg181_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2agpg180_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2agpg181_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_2AGPGAT120" sboTerm="SBO:0000176" id="R_2AGPGAT120" name="2-acyl-glycerophospho-glycerol acyltransferase (n-C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -18701,7 +19331,7 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_2AGPGAT180" sboTerm="SBO:0000176" id="R_2AGPGAT180" name="2-acyl-glycerophospho-glycerol acyltransferase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_2AGPGAT181" sboTerm="SBO:0000176" id="R_2AGPGAT181" name="2-acyl-glycerophospho-glycerol acyltransferase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -18709,23 +19339,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_2AGPGAT180">
+            <rdf:Description rdf:about="#R_2AGPGAT181">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94776"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94777"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_2agpg180_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2agpg181_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocdcea_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pg180_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pg181_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -18937,31 +19567,6 @@
           <speciesReference species="M_ara5p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_A6PAG" sboTerm="SBO:0000176" id="R_A6PAG" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_A6PAG">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gal_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_dgal6p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_AAAN" sboTerm="SBO:0000176" id="R_AAAN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18992,7 +19597,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG271"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AACPS1" sboTerm="SBO:0000176" id="R_AACPS1" name="Acyl-[acyl-carrier-protein] synthetase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_AACPS3" sboTerm="SBO:0000176" id="R_AACPS3" name="Acyl-[acyl-carrier-protein] synthetase  (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -19000,11 +19605,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_AACPS1">
+            <rdf:Description rdf:about="#R_AACPS3">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95142"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -19013,15 +19618,15 @@
         <listOfReactants>
           <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_AACPS3" sboTerm="SBO:0000176" id="R_AACPS3" name="Acyl-[acyl-carrier-protein] synthetase  (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACACT6r" sboTerm="SBO:0000176" id="R_ACACT6r" name="Acetyl-CoA C-acyltransferase (dodecanoyl-CoA) (r)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -19029,25 +19634,42 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_AACPS3">
+            <rdf:Description rdf:about="#R_ACACT6r">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.16"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06510"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ACALDt" sboTerm="SBO:0000185" id="R_ACALDt" name="Acetaldehyde reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -19078,74 +19700,27 @@
         <listOfProducts>
           <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACCOAL" sboTerm="SBO:0000176" id="R_ACCOAL" name="Acetate-CoA ligase (ADP-forming)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACCOAL">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.13"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95221"/>
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-              </bqbiol:is>
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-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_ACGAMPM" sboTerm="SBO:0000176" id="R_ACGAMPM" name="Phosphoacetylglucosamine mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACGAM1P_Et" sboTerm="SBO:0000185" id="R_ACGAM1P_Et" name="N-Acetyl-D-glucosamine 1-phosphate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACGAMPM">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-446185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01505"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ACGAM1P_Et">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_acgam6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acgam1p_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_acgam1p_c" stoichiometry="1" constant="true"/>
@@ -19190,6 +19765,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACHBS" sboTerm="SBO:0000176" id="R_ACHBS" name="2-aceto-2-hydroxybutanoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACHBS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETOOHBUTSYN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08648"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2obut_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2ahbut_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ACKILE" sboTerm="SBO:0000176" id="R_ACKILE" name="2 methylbutanoyl p acyl kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -19406,7 +20015,7 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACOAD2" sboTerm="SBO:0000176" id="R_ACOAD2" name="Acyl-CoA dehydrogenase (hexanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACOAD6" sboTerm="SBO:0000176" id="R_ACOAD6" name="Acyl-CoA dehydrogenase (tetradecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -19414,51 +20023,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACOAD2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.44"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95308"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_ACOAD2f" sboTerm="SBO:0000176" id="R_ACOAD2f" name="Acyl-CoA dehydrogenase (hexanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACOAD2f">
+            <rdf:Description rdf:about="#R_ACOAD6">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10014"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_hx2coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ACOAD6f" sboTerm="SBO:0000176" id="R_ACOAD6f" name="Acyl-CoA dehydrogenase (tetradecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -19690,55 +20273,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG065"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACYP_3" sboTerm="SBO:0000176" id="R_ACYP_3" name="Acylphosphatase (2)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ACYP_3">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_actp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_ACt2r_1" sboTerm="SBO:0000185" id="R_ACt2r_1" name="Acetate reversible transport via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ACt2r_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ADADir" sboTerm="SBO:0000176" id="R_ADADir" name="Deoxycytidine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -19946,32 +20480,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG107"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ADKd" sboTerm="SBO:0000176" id="R_ADKd" name="Adenylate kinase (d form)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ADKd">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95454"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10427"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_damp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_dadp_c" stoichiometry="2" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ADNCYC" sboTerm="SBO:0000176" id="R_ADNCYC" name="Adenylate cyclase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20071,68 +20579,6 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_ADNK3" sboTerm="SBO:0000176" id="R_ADNK3" name="Adenosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ADNK3">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95457"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10768"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_ADNt2" sboTerm="SBO:0000185" id="R_ADNt2" name="Adenosine transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ADNt2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29989"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108A"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95461"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08068"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ADPGLC" sboTerm="SBO:0000176" id="R_ADPGLC" name="ADPglucose diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20224,6 +20670,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AGDC" sboTerm="SBO:0000176" id="R_AGDC" name="N-acetylglucosamine-6-phosphate deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22939"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NAG6PDEACET-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acgam6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gam6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGPAT160" sboTerm="SBO:0000176" id="R_AGPAT160" name="1-hexadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20292,6 +20772,55 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG216"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AHCi" sboTerm="SBO:0000176" id="R_AHCi" name="Adenosylhomocysteinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AHCi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.3.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADENOSYLHOMOCYSTEINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95492"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-174401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00141"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AKGDH" sboTerm="SBO:0000176" id="R_AKGDH" name="2-Oxogluterate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20353,28 +20882,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG271"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AKGt" sboTerm="SBO:0000185" id="R_AKGt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_AKGt">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_akg_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ALAALAabcpp" sboTerm="SBO:0000185" id="R_ALAALAabcpp" name="D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20541,66 +21048,6 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_ALAS" sboTerm="SBO:0000176" id="R_ALAS" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ALAS">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_5aop_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_ALATA_D" sboTerm="SBO:0000176" id="R_ALATA_D" name="D-alanine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ALATA_D">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15869"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15870"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-ALANINE-AMINOTRANSFERASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95696"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00849"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ALATA_D2" sboTerm="SBO:0000176" id="R_ALATA_D2" name="D-alanine transaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20730,7 +21177,35 @@
           <speciesReference species="M_acgam6p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_AMMQT8" sboTerm="SBO:0000176" id="R_AMMQT8" name="S-adenosylmethione:2-demthylmenaquinone methyltransferase (menaquinone 8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_AMANK_1" sboTerm="SBO:0000176" id="R_AMANK_1" name="N-acetyl-D-mannosamine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AMANK_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_acmana_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acmanap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG085"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_AMMQT8_2" sboTerm="SBO:0000176" id="R_AMMQT8_2" name="S-adenosylmethione:2-demethylmenaquinone methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -20738,11 +21213,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_AMMQT8">
+            <rdf:Description rdf:about="#R_AMMQT8_2">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10094"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -20751,11 +21226,11 @@
         <listOfReactants>
           <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_AMPEP1" sboTerm="SBO:0000176" id="R_AMPEP1" name="Aminopeptidase " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -21346,6 +21821,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG391"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AMPt6" sboTerm="SBO:0000185" id="R_AMPt6" name="AMP transport inout via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMPt6">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05497"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_amp_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AP3S" sboTerm="SBO:0000176" id="R_AP3S" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21540,28 +22042,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ARSR" sboTerm="SBO:0000176" id="R_ARSR" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
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-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ASPabcpp" sboTerm="SBO:0000185" id="R_ASPabcpp" name="L-aspartate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21602,32 +22082,26 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG390"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ASPtex" sboTerm="SBO:0000185" id="R_ASPtex" name="L-aspartate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ASPtpp" sboTerm="SBO:0000185" id="R_ASPtpp" name="L-aspartate uptake via facillitated diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96107"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13232"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ASPtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_asp__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ATHRDHr" sboTerm="SBO:0000176" id="R_ATHRDHr" name="L-allo-threonine dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -21730,7 +22204,7 @@
           <speciesReference species="M_glc__D_c" stoichiometry="2" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_BPNT" sboTerm="SBO:0000176" id="R_BPNT" name="3&apos;,5&apos;-bisphosphate nucleotidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_BGLA1" sboTerm="SBO:0000176" id="R_BGLA1" name="6-phospho-beta-glucosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -21738,38 +22212,114 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_BPNT">
+            <rdf:Description rdf:about="#R_BGLA1">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10043"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.97"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:325-BISPHOSPHATE-NUCLEOTIDASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96321"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-176606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00137"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96242"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
+        <listOfReactants>
+          <speciesReference species="M_6pgg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_BGLApp" sboTerm="SBO:0000176" id="R_BGLApp" name="Beta glucosidase  periplasmic  " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_BGLApp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cellb_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glc__D_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_BKDA2" sboTerm="SBO:0000176" id="R_BKDA2" name="BKDA2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_BKDA2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lpam_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2mpdhl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG274"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_BKDC" sboTerm="SBO:0000176" id="R_BKDC" name="BKDC" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_BKDC">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2mpdhl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dhlam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ibcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_BPNT_1" sboTerm="SBO:0000176" id="R_BPNT_1" name="3&apos;,5&apos;-bisphosphate nucleotidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_BPNT_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pap_c" stoichiometry="1" constant="true"/>
@@ -21869,33 +22419,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_BUTCT" sboTerm="SBO:0000176" id="R_BUTCT" name="Acetyl-CoA:butyrate-CoA transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_BUTCT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.3.8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96217"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_but_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_BUTKr" sboTerm="SBO:0000176" id="R_BUTKr" name="Butyrate kinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21951,6 +22474,9 @@
         <listOfProducts>
           <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_CA2abc" sboTerm="SBO:0000185" id="R_CA2abc" name="Calcium transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -22331,7 +22857,7 @@
           <speciesReference species="M_pa140_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_CDAPPA180" sboTerm="SBO:0000176" id="R_CDAPPA180" name="CDP-Diacylglycerol pyrophostatase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CDAPPA181" sboTerm="SBO:0000176" id="R_CDAPPA181" name="CDP-Diacylglycerol pyrophostatase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -22339,25 +22865,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CDAPPA180">
+            <rdf:Description rdf:about="#R_CDAPPA181">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.26"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96506"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08205"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_cdpdodecg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_CDDTPP" sboTerm="SBO:0000176" id="R_CDDTPP" name="DTTP cytidine 5&apos;-phosphotransferase " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -22413,6 +22939,61 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_CELASEpp" sboTerm="SBO:0000176" id="R_CELASEpp" name="Endo 1 4 D glucanase cellolose " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CELASEpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cell4_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cellb_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CELBpts" sboTerm="SBO:0000185" id="R_CELBpts" name="Cellobiose transport via PEPPyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CELBpts">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96586"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cellb_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6pgg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_MG041"/>
+            <fbc:geneProductRef fbc:geneProduct="G_MG429"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CELLB_Et" sboTerm="SBO:0000185" id="R_CELLB_Et" name="Cellobiose transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22435,6 +23016,31 @@
           <speciesReference species="M_cellb_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_CELLS" sboTerm="SBO:0000185" id="R_CELLS" name="Cellulose synthase  UDP forming " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CELLS">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udpg_c" stoichiometry="4" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cell4_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_udp_c" stoichiometry="4" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CGLYabcpp" sboTerm="SBO:0000185" id="R_CGLYabcpp" name="L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22469,6 +23075,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG080"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CHLabc_rev" sboTerm="SBO:0000185" id="R_CHLabc_rev" name="T00114b" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHLabc_rev">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CHORM" sboTerm="SBO:0000176" id="R_CHORM" name="Chorismate mutase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22501,7 +23134,30 @@
           <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_CHORS" sboTerm="SBO:0000176" id="R_CHORS" name="Chorismate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CHORS_1" sboTerm="SBO:0000176" id="R_CHORS_1" name="Chorismate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHORS_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3psme_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CLPNH180pp" sboTerm="SBO:0000176" id="R_CLPNH180pp" name="Cardiolipin hydrolase (periplasm, n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -22509,32 +23165,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CHORS">
+            <rdf:Description rdf:about="#R_CLPNH180pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21021"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHORISMATE-SYNTHASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01714"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96779"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_3psme_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_clpn180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_CMPN" sboTerm="SBO:0000176" id="R_CMPN" name="CMP nucleosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CLPNS180pp" sboTerm="SBO:0000176" id="R_CLPNS180pp" name="Cardiolipin synthase (periplasmic, n-C18:0)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -22542,23 +23192,48 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CMPN">
+            <rdf:Description rdf:about="#R_CLPNS180pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.10"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96787"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pg180_p" stoichiometry="2" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_clpn180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMPt6" sboTerm="SBO:0000185" id="R_CMPt6" name="CMP transport inout via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CMPt6">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05525"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cmp_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_CO2t" sboTerm="SBO:0000185" id="R_CO2t" name="CO2 transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -22647,6 +23322,189 @@
         <listOfProducts>
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CO2tpp" sboTerm="SBO:0000185" id="R_CO2tpp" name="CO2 transporter via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
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+          <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
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         <notes>
@@ -22760,165 +23618,6 @@
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-            <p>SBOTerm: SBO:0000176</p>
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-            <p>SBOTerm: SBO:0000185</p>
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-      <reaction metaid="R_CYTBD2pp" sboTerm="SBO:0000185" id="R_CYTBD2pp" name="Cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
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-          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
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       <reaction metaid="R_CYTD" sboTerm="SBO:0000176" id="R_CYTD" name="Cytidine deaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23091,39 +23790,6 @@
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       </reaction>
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
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-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
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-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
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         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23407,6 +24073,32 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_DAAD4" sboTerm="SBO:0000176" id="R_DAAD4" name="D Amino acid dehydrogenase  D met " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DAAD4">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__D_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2kmb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DACTPP" sboTerm="SBO:0000176" id="R_DACTPP" name="DATP cytidine 5&apos;-phosphotransferase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23502,63 +24194,91 @@
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+      <reaction metaid="R_DAGK180" sboTerm="SBO:0000176" id="R_DAGK180" name="Diacylglycerol kinase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_DADNt2">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97098"/>
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         <listOfReactants>
-          <speciesReference species="M_dad_2_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_12dgr180_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_dad_2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa180_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_DALAtex" sboTerm="SBO:0000185" id="R_DALAtex" name="D-Alanine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DAGK181" sboTerm="SBO:0000176" id="R_DAGK181" name="Diacylglycerol kinase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_DALAtex">
+            <rdf:Description rdf:about="#R_DAGK181">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08302"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97100"/>
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             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_ala__D_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_DALAt2pp" sboTerm="SBO:0000185" id="R_DALAt2pp" name="D-alanine transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DALAt2pp">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-62A"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08301"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
           <speciesReference species="M_ala__D_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_DASYN120" sboTerm="SBO:0000176" id="R_DASYN120" name="CDP-diacylglycerol synthetase (n-C12:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -23689,6 +24409,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG190"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DASYN181" sboTerm="SBO:0000176" id="R_DASYN181" name="CDP-diacylglycerol synthetase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DASYN181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08312"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cdpdodec11eg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG190"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DAUPP" sboTerm="SBO:0000176" id="R_DAUPP" name="DATP uridine 5&apos;-phosphotransferase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23823,6 +24575,30 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_DDCAtexi" sboTerm="SBO:0000185" id="R_DDCAtexi" name="Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DDCAtexi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ddca_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ddca_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DESATPE160" sboTerm="SBO:0000176" id="R_DESATPE160" name="PE160 desaturase  pe C160  pe C161d9 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23921,43 +24697,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG107"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DGNSK" sboTerm="SBO:0000176" id="R_DGNSK" name="Deoxyguanosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DGNSK">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19204"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.145"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYGUANOSINE-KINASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97323"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01444"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_dgsn_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_dgmp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_DGUPP" sboTerm="SBO:0000176" id="R_DGUPP" name="DGTP uridine 5&apos;-phosphotransferase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23986,6 +24725,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG382"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHAD2" sboTerm="SBO:0000176" id="R_DHAD2" name="Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHAD2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYMETVALDEHYDRAT-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05070"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_23dhmp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHAPT" sboTerm="SBO:0000176" id="R_DHAPT" name="Dihydroxyacetone phosphotransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24023,6 +24794,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG041"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHAt" sboTerm="SBO:0000185" id="R_DHAt" name="Dihydroxyacetone transport via facilitated diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHAt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97367"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08326"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dha_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHFR" sboTerm="SBO:0000176" id="R_DHFR" name="Dihydrofolate reductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24074,30 +24873,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG228"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHNAOT_1" sboTerm="SBO:0000176" id="R_DHNAOT_1" name="1 4 dihydroxy 2 naphthoate octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHNAOT" sboTerm="SBO:0000176" id="R_DHNAOT" name="1,4-dihydroxy-2-naphthoate octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_DHNAOT_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_DHNAOT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10093"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
           <speciesReference species="M_dhna_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_octdp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -24406,61 +25207,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG077"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DLMETR" sboTerm="SBO:0000176" id="R_DLMETR" name="Methionine racemase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_DLMETR">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_met__D_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_DMALRED" sboTerm="SBO:0000176" id="R_DMALRED" name="(S)-Malate:(acceptor) oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DMALRED">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.5.4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31291"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31292"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31293"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97508"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00935"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mal__L_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_oaa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_DMATT" sboTerm="SBO:0000176" id="R_DMATT" name="Dimethylallyltranstransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24513,7 +25259,7 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_DMPPS_syn" sboTerm="SBO:0000176" id="R_DMPPS_syn" name="1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DMPPS" sboTerm="SBO:0000176" id="R_DMPPS" name="1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -24521,12 +25267,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DMPPS_syn">
+            <rdf:Description rdf:about="#R_DMPPS">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.1.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08352"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -24535,12 +25281,12 @@
         <listOfReactants>
           <speciesReference species="M_h2mb4p_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_dmpp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_DPCOAK" sboTerm="SBO:0000176" id="R_DPCOAK" name="Dephospho-CoA kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -25015,81 +25761,6 @@
           <speciesReference species="M_dxyl5p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_D_LACt2" sboTerm="SBO:0000185" id="R_D_LACt2" name="D lactate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_D_LACt2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97838"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08350"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09772"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10171"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_lac__D_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_ECOAH6" sboTerm="SBO:0000176" id="R_ECOAH6" name="3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ECOAH6">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31171"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31172"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31173"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31174"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.17"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14273"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97891"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04740"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03241"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_3htdcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ENO" sboTerm="SBO:0000176" id="R_ENO" name="Enolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -25195,7 +25866,7 @@
           <speciesReference species="M_etha_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_F6PA" sboTerm="SBO:0000176" id="R_F6PA" name="Fructose 6-phosphate aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FACOAE140" sboTerm="SBO:0000176" id="R_FACOAE140" name="Fatty-acid-CoA thioesterase (tetradecanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -25203,27 +25874,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_F6PA">
+            <rdf:Description rdf:about="#R_FACOAE140">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28003"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28005"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99129"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_dha_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_FACOAE141" sboTerm="SBO:0000176" id="R_FACOAE141" name="Fatty-acid-CoA thioesterase (tetradecenoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -25280,6 +25948,36 @@
           <speciesReference species="M_hdcea_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_FACOAL140t2pp" sboTerm="SBO:0000185" id="R_FACOAL140t2pp" name="Fatty-acid-CoA ligase (tetradecanoate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FACOAL140t2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99147"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FACOAL141t2pp" sboTerm="SBO:0000185" id="R_FACOAL141t2pp" name="Fatty-acid-CoA ligase (tetradecenoate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -25661,6 +26359,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG008"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine complex formation  P putida KT2440 specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3PYOVDL2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3abc" sboTerm="SBO:0000185" id="R_FE3abc" name="Iron (III) transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26224,7 +26948,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG265"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_G1SAT" sboTerm="SBO:0000176" id="R_G1SAT" name="Glutamate-1-semialdehyde aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_G3PAT160" sboTerm="SBO:0000176" id="R_G3PAT160" name="Glycerol-3-phosphate acyltransferase (C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -26232,55 +26956,86 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_G1SAT">
+            <rdf:Description rdf:about="#R_G3PAT160">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99857"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_1hdecg3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_G3PCabcpp" sboTerm="SBO:0000185" id="R_G3PCabcpp" name="Sn-glycerol-3-phosphocholine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PCabcpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14265"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14268"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08553"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_glu1sa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_5aop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG187"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_G3PAT160" sboTerm="SBO:0000176" id="R_G3PAT160" name="Glycerol-3-phosphate acyltransferase (C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_G3PCtex" sboTerm="SBO:0000185" id="R_G3PCtex" name="Glycero-3-phosphocholine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_G3PAT160">
+            <rdf:Description rdf:about="#R_G3PCtex">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13291"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_palmACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_1hdecg3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_G3PD1ir" sboTerm="SBO:0000176" id="R_G3PD1ir" name="Glycerol 3 phosphate dehydrogenase  NAD " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -26339,40 +27094,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG039"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_G3PD2" sboTerm="SBO:0000176" id="R_G3PD2" name="Glycerol-3-phosphate dehydrogenase (NADP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_G3PD2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.94"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00844"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00612"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_dhap_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_G3PEabcpp" sboTerm="SBO:0000185" id="R_G3PEabcpp" name="Sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26489,6 +27210,127 @@
           <speciesReference species="M_g3pg_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_G3PIabcpp" sboTerm="SBO:0000185" id="R_G3PIabcpp" name="Sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PIabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08563"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pi_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG187"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_G3PItex" sboTerm="SBO:0000185" id="R_G3PItex" name="Glycero-3-phospho-1-inositol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PItex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13292"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3pi_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3pi_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_G3PSabcpp" sboTerm="SBO:0000185" id="R_G3PSabcpp" name="Sn-glycerol-3-phosphoserine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PSabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08565"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3ps_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3ps_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG187"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_G3PStex" sboTerm="SBO:0000185" id="R_G3PStex" name="Glycerophosphserine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PStex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08566"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3ps_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3ps_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_G3PT" sboTerm="SBO:0000176" id="R_G3PT" name="Glycerol-3-phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26582,28 +27424,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG111"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_G6PI2_2" sboTerm="SBO:0000176" id="R_G6PI2_2" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_G6PI2_2">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_g6p_A_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_G6PI3" sboTerm="SBO:0000176" id="R_G6PI3" name="Glucose 6 phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26706,42 +27526,6 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_GALT" sboTerm="SBO:0000176" id="R_GALT" name="Galactose 1 phosphate uridylyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GALT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14209"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14212"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.10"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.64"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UTPHEXPURIDYLYLTRANS-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00502"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00355"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_gal1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GALTpts" sboTerm="SBO:0000185" id="R_GALTpts" name="Galactitol transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27115,6 +27899,98 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG301"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GCCa" sboTerm="SBO:0000176" id="R_GCCa" name="Glycine-cleavage complex" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GCCa">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.4.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06377"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lpro_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_alpro_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_GCCb" sboTerm="SBO:0000176" id="R_GCCb" name="Glycine cleavage complex" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GCCb">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.10"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04125"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_alpro_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dhlpro_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_GCCc" sboTerm="SBO:0000176" id="R_GCCc" name="Glycine-cleavage complex" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GCCc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06493"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhlpro_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lpro_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG271"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GDPDPK" sboTerm="SBO:0000176" id="R_GDPDPK" name="GDP diphosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27397,34 +28273,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLCtex" sboTerm="SBO:0000185" id="R_GLCtex" name="Glucose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_GLCtex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09679"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09875"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_glc__D_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glc__D_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLGC" sboTerm="SBO:0000176" id="R_GLGC" name="Glucose-1-phosphate adenylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27717,28 +28565,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG390"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLUt3" sboTerm="SBO:0000185" id="R_GLUt3" name="L-glutamatetransport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_GLUt3">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
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-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glu__L_e" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLYAT" sboTerm="SBO:0000176" id="R_GLYAT" name="Glycine C-acetyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27815,74 +28641,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG187"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLYC3Ptex" sboTerm="SBO:0000185" id="R_GLYC3Ptex" name="Glycerol-3-phosphate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GLYC3Ptex">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09749"/>
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-        <listOfReactants>
-          <speciesReference species="M_glyc3p_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glyc3p_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_GLYCL" sboTerm="SBO:0000176" id="R_GLYCL" name="Glycine Cleavage System" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GLYCL">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.4.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.4"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27758"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27760"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100330"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01221"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLYCYSAP" sboTerm="SBO:0000176" id="R_GLYCYSAP" name="Gly-Cys aminopeptidase " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28028,6 +28786,97 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG033"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYCtpp" sboTerm="SBO:0000185" id="R_GLYCtpp" name="Glycerol transport via channel (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLYCtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29678"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100343"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432049"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432074"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432074"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08658"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLYGLNtr" sboTerm="SBO:0000185" id="R_GLYGLNtr" name="Dipeptide transport via ABC system gly-gln " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28382,6 +29231,52 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_GPDDA1" sboTerm="SBO:0000176" id="R_GPDDA1" name="Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GPDDA1">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16064"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1483112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-6814137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00758"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3pc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_MG293"/>
+            <fbc:geneProductRef fbc:geneProduct="G_MG385"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GPDDA2" sboTerm="SBO:0000176" id="R_GPDDA2" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28424,6 +29319,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GPDDA3" sboTerm="SBO:0000176" id="R_GPDDA3" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_GPDDA3">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29878"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08668"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3ps_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG293"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GPDDA4" sboTerm="SBO:0000176" id="R_GPDDA4" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28457,6 +29389,57 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG293"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GPDDA5" sboTerm="SBO:0000176" id="R_GPDDA5" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_GPDDA5">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.4.44"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.1.4.44-RXN"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-6813740"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-6813740"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00889"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG293"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GRTT" sboTerm="SBO:0000176" id="R_GRTT" name="Geranyltranstransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28563,35 +29546,6 @@
           <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_GSNt2" sboTerm="SBO:0000185" id="R_GSNt2" name="Guanosine transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_GSNt2">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05204"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09747"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
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-        <listOfReactants>
-          <speciesReference species="M_gsn_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_gsn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GTHOr" sboTerm="SBO:0000176" id="R_GTHOr" name="Glutathione oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28929,7 +29883,7 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2Ot" sboTerm="SBO:0000185" id="R_H2Ot" name="H2O transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -28937,100 +29891,499 @@
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-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100494"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
+            <rdf:Description rdf:about="#R_H2Ot">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-547"/>
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+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
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+        <notes>
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+            <p>SBOTerm: SBO:0000185</p>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507870"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507870"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432065"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_H2Stex" sboTerm="SBO:0000185" id="R_H2Stex" name="H2s transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2SO" sboTerm="SBO:0000176" id="R_H2SO" name="Hydrogen sulfide oxidation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_H2SO">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08688"/>
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             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2s_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HACD6" sboTerm="SBO:0000176" id="R_HACD6" name="3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_HACD6">
+            <rdf:Description rdf:about="#R_H2St1">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77283"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77283"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77283"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04739"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06777"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_3htdcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_HCYSMT" sboTerm="SBO:0000176" id="R_HCYSMT" name="Homocysteine S-methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -29098,7 +30451,7 @@
           <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_HEMEti" sboTerm="SBO:0000185" id="R_HEMEti" name="Heme transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HDCAt2pp" sboTerm="SBO:0000185" id="R_HDCAt2pp" name="Hexadecanoate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -29106,96 +30459,74 @@
         </notes>
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-            <rdf:Description rdf:about="#R_HEMEti">
+            <rdf:Description rdf:about="#R_HDCAt2pp">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19262#2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19263#2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19264#2"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10162"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdca_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_HEX4" sboTerm="SBO:0000176" id="R_HEX4" name="Hexokinase (D-mannose:ATP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HEX7_1" sboTerm="SBO:0000176" id="R_HEX7_1" name="Hexokinase (D-fructose:ATP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_HEX4">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.7"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95795"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00975"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HEX7_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fru_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_HEX7" sboTerm="SBO:0000176" id="R_HEX7" name="Hexokinase (D-fructose:ATP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HMR_0188" sboTerm="SBO:0000176" id="R_HMR_0188" name="Long-Chain-Fatty-Acid Coenzyme A Ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_HEX7">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100614"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00867"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HMR_0188">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_fru_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_HXPRT" sboTerm="SBO:0000176" id="R_HXPRT" name="Hypoxanthine phosphoribosyltransferase (Hypoxanthine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -29235,33 +30566,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG458"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ILEt2r" sboTerm="SBO:0000185" id="R_ILEt2r" name="L isoleucine reversible transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ILEDHr_1" sboTerm="SBO:0000176" id="R_ILEDHr_1" name="Valine dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ILEt2r">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13322"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ILEDHr_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_INOST_Et" sboTerm="SBO:0000185" id="R_INOST_Et" name="Myo-Inositol transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -29418,6 +30747,53 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG015"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_KARI_1" sboTerm="SBO:0000176" id="R_KARI_1" name="Ketol-acid reductoisomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_KARI_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ahbut_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3hmop_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_KARI_23dhmp_1" sboTerm="SBO:0000176" id="R_KARI_23dhmp_1" name="Ketol-acid reductoisomerase, (R)-2,3-Dihydroxy-3-methylpentanoate forming" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_KARI_23dhmp_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hmop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_KDOCT2" sboTerm="SBO:0000176" id="R_KDOCT2" name="3-deoxy-manno-octulosonate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29766,36 +31142,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG460"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_LEUt2r" sboTerm="SBO:0000185" id="R_LEUt2r" name="L leucine reversible transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_LEUt2r">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05243"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13340"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_leu__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_LIPAMPL" sboTerm="SBO:0000176" id="R_LIPAMPL" name="Lipoyl-adenylate protein ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29879,7 +31225,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG270"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_LLEUDr" sboTerm="SBO:0000176" id="R_LLEUDr" name="L leucine dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_LPADSS" sboTerm="SBO:0000176" id="R_LPADSS" name="Lipid A disaccaride synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -29887,36 +31233,34 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_LLEUDr">
+            <rdf:Description rdf:about="#R_LPADSS">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/12220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/12221"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/12222"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/12223"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LEUCINE-DEHYDROGENASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01088"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.182"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LIPIDADISACCHARIDESYNTH-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03159"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lipidX_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_u23ga_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lipidAds_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_LPADSS" sboTerm="SBO:0000176" id="R_LPADSS" name="Lipid A disaccaride synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_LPLIPAL1A160pp" sboTerm="SBO:0000176" id="R_LPLIPAL1A160pp" name="Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -29924,31 +31268,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_LPADSS">
+            <rdf:Description rdf:about="#R_LPLIPAL1A160pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.182"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22668"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22669"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22671"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LIPIDADISACCHARIDESYNTH-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08799"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_lipidX_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_u23ga_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_1hdecg3p_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_lipidAds_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glyc3p_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_LTHRK" sboTerm="SBO:0000176" id="R_LTHRK" name="L threonine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -30016,6 +31354,43 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_LYSabc" sboTerm="SBO:0000185" id="R_LYSabc" name="L-lysine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LYSabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29887#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29888#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29889#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29890#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-3-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08853"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LacR" sboTerm="SBO:0000176" id="R_LacR" name="Lactate racemase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -30051,6 +31426,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG460"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_M1PD" sboTerm="SBO:0000176" id="R_M1PD" name="Mannitol-1-phosphate 5-dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_M1PD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MANNPDEHYDROG-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02703"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_mnl1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MAL6PG" sboTerm="SBO:0000176" id="R_MAL6PG" name="Maltose 6  phosphate glucosidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -30124,31 +31533,26 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MAN1Pt6" sboTerm="SBO:0000185" id="R_MAN1Pt6" name="MAN1P transport inout via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MANE" sboTerm="SBO:0000176" id="R_MANE" name="Manose epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_MAN1Pt6">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05609"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MANE">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man1p_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_man_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_MANpts" sboTerm="SBO:0000185" id="R_MANpts" name="D-mannose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -30366,21 +31770,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG459"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MEPCT_1" sboTerm="SBO:0000176" id="R_MEPCT_1" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MEPCT" sboTerm="SBO:0000176" id="R_MEPCT" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MEPCT_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MEPCT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13432"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.7.7.60-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03907"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
           <speciesReference species="M_2me4p_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/>
@@ -30498,58 +31912,99 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG467"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX1abc" sboTerm="SBO:0000185" id="R_METSOX1abc" name="L-Methionine S-oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METOX1s" sboTerm="SBO:0000176" id="R_METOX1s" name="Methionine oxidation (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_METSOX1abc">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METOX1s">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09942"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX2abc" sboTerm="SBO:0000185" id="R_METSOX2abc" name="L-Methionine R-oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METOX2s" sboTerm="SBO:0000176" id="R_METOX2s" name="Methionine oxidation 2 (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_METSOX2abc">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METOX2s">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-7188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08913"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_METS" sboTerm="SBO:0000176" id="R_METS" name="Methionine synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00946"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_METSOXR1" sboTerm="SBO:0000176" id="R_METSOXR1" name="L-methionine-S-oxide reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -30963,28 +32418,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MNL1P_Et" sboTerm="SBO:0000185" id="R_MNL1P_Et" name="D-Mannitol 1-phosphate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MNL1P_Et">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_mnl1p_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_mnl1p_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MNLpts" sboTerm="SBO:0000185" id="R_MNLpts" name="Mannitol transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31275,6 +32708,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG013"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MTHFR3" sboTerm="SBO:0000176" id="R_MTHFR3" name="5 10 methylenetetrahydrofolatereductase  NADPH " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MTHFR3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01224"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_mlthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NADDPp_1" sboTerm="SBO:0000176" id="R_NADDPp_1" name="NAD diphosphatase, peroxisomal" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -31581,7 +33047,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG383"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4ti" sboTerm="SBO:0000185" id="R_NH4ti" name="Ammonia transport  efflux  cytosol to extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NCAMUP" sboTerm="SBO:0000185" id="R_NCAMUP" name="Nicotinamide acid uptake" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NCAMUP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10867"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ncam_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ncam_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -31589,7 +33080,7 @@
         </notes>
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-            <rdf:Description rdf:about="#R_NH4ti">
+            <rdf:Description rdf:about="#R_NH4tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
@@ -31625,11 +33116,67 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4tpp" sboTerm="SBO:0000185" id="R_NH4tpp" name="Ammonia reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NIabc" sboTerm="SBO:0000185" id="R_NIabc" name="Nickel transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -31946,6 +33493,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG240"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NO2tex" sboTerm="SBO:0000185" id="R_NO2tex" name="Nitrite transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NO2tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28984"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10823"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_no2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NOX" sboTerm="SBO:0000176" id="R_NOX" name="NADH oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32343,38 +33921,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NTPTP2" sboTerm="SBO:0000176" id="R_NTPTP2" name="Nucleoside triphosphate tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NTRIR4pp" sboTerm="SBO:0000185" id="R_NTRIR4pp" name="Nitrite Reductase (Menaquinole-8, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NTPTP2">
+            <rdf:Description rdf:about="#R_NTRIR4pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30561"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30562"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29166"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09019"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_mql8_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_no2_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_gsn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_mqn8_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_O2t" sboTerm="SBO:0000185" id="R_O2t" name="O2 transport  diffusion " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -32382,7 +33962,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2t">
+            <rdf:Description rdf:about="#R_O2tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
@@ -32401,8 +33981,11 @@
           <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="O2 transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -32433,6 +34016,9 @@
         <listOfProducts>
           <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OBDHc" sboTerm="SBO:0000176" id="R_OBDHc" name="2-Oxobutanoate dehydrogenase, cytosolic" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -32475,33 +34061,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_OCDCAt2pp" sboTerm="SBO:0000185" id="R_OCDCAt2pp" name="Octadecanoate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_OCDCAt2pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10161"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdca_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_OCDCEAt2pp" sboTerm="SBO:0000185" id="R_OCDCEAt2pp" name="Octadecenoate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32716,28 +34275,122 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_P52O" sboTerm="SBO:0000176" id="R_P52O" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PA160abcpp" sboTerm="SBO:0000185" id="R_PA160abcpp" name="Phosphatidate transport via ABC system (n-C16:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PA160abcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102307"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09056"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa160_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG015"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PA181abcpp" sboTerm="SBO:0000185" id="R_PA181abcpp" name="Phosphatidate transport via ABC system (n-C18:1, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PA181abcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09059"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG015"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PAPA180pp" sboTerm="SBO:0000176" id="R_PAPA180pp" name="Phosphatidate phosphatase (periplasmic, n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_P52O">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PAPA180pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102354"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyam5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa180_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_glu__D_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_12dgr180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PAPA181pp" sboTerm="SBO:0000176" id="R_PAPA181pp" name="Phosphatidate phosphatase (periplasmic, n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PAPA181pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102356"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr181_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PAPPT3" sboTerm="SBO:0000176" id="R_PAPPT3" name="Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -33505,6 +35158,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG015"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PG181abcpp" sboTerm="SBO:0000185" id="R_PG181abcpp" name="Phosphatidylglycerol transport via ABC system (n-C18:1, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PG181abcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102524"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pg181_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_MG015"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PGI" sboTerm="SBO:0000176" id="R_PGI" name="Glucose-6-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33742,6 +35427,99 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG430"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PGPP180" sboTerm="SBO:0000176" id="R_PGPP180" name="Phosphatidylglycerol phosphate phosphatase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PGPP180">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102566"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09106"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pgp180_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pg180_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PGSA180" sboTerm="SBO:0000176" id="R_PGSA180" name="Phosphatidylglycerol synthase (n-C18:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PGSA180">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09113"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cdpdodecg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pgp180_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PHEMEt" sboTerm="SBO:0000185" id="R_PHEMEt" name="Heme transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PHEMEt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-917892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-917892"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pheme_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pheme_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PIabc" sboTerm="SBO:0000185" id="R_PIabc" name="Phosphate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33789,39 +35567,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PItex" sboTerm="SBO:0000185" id="R_PItex" name="Phosphate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PItex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/32823"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/32824"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/32825"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/32826"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-470"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10838"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13178"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_pi_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PIuabcpp" sboTerm="SBO:0000185" id="R_PIuabcpp" name="Phosphate transport via ABC system (uptake, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33996,7 +35741,7 @@
           <speciesReference species="M_hdcea_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PLIPA1G180pp" sboTerm="SBO:0000176" id="R_PLIPA1G180pp" name="Phospholipase A1 (phosphatidylglycerol, n-C18:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PLIPA1G181pp" sboTerm="SBO:0000176" id="R_PLIPA1G181pp" name="Phospholipase A1 (phosphatidylglycerol, n-C18:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -34004,10 +35749,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PLIPA1G180pp">
+            <rdf:Description rdf:about="#R_PLIPA1G181pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102987"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -34015,12 +35760,41 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pg180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2agpg181_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PLIPA2A160pp" sboTerm="SBO:0000176" id="R_PLIPA2A160pp" name="Phospholipase A2 (phosphatidate, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PLIPA2A160pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09147"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa160_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2agpg180_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_1hdecg3p_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdca_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hdca_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PMANM" sboTerm="SBO:0000176" id="R_PMANM" name="Phosphomannomutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -34339,7 +36113,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG410"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PPNDH" sboTerm="SBO:0000176" id="R_PPNDH" name="Prephenate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PPM2" sboTerm="SBO:0000176" id="R_PPM2" name="Phosphopentomutase 2 (deoxyribose)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -34347,35 +36121,35 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PPNDH">
+            <rdf:Description rdf:about="#R_PPM2">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21648"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21649"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21650"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21651"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.51"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.91"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PREPHENATEDEHYDRAT-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01373"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-PPENTOMUT-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01986"/>
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               </bqbiol:is>
             </rdf:Description>
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         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dr1p_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dr5p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PPS" sboTerm="SBO:0000176" id="R_PPS" name="Phosphoenolpyruvate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PPND" sboTerm="SBO:0000176" id="R_PPND" name="Prephenate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -34383,33 +36157,31 @@
         </notes>
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           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PPS">
+            <rdf:Description rdf:about="#R_PPND">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11367"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.9.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PEPSYNTH-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103140"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00199"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.12"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PREPHENATEDEHYDROG-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01268"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pphn_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PROGLYabcpp" sboTerm="SBO:0000185" id="R_PROGLYabcpp" name="L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -34536,32 +36308,21 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG058"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PSCVT" sboTerm="SBO:0000176" id="R_PSCVT" name="3-phosphoshikimate 1-carboxyvinyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PSCVT_1" sboTerm="SBO:0000176" id="R_PSCVT_1" name="3-phosphoshikimate 1-carboxyvinyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PSCVT">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21258"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.5.1.19-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MTU-964886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02476"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PSCVT_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/>
@@ -35765,7 +37526,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG051"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_QUINDH" sboTerm="SBO:0000176" id="R_QUINDH" name="Quinate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_QSDH" sboTerm="SBO:0000176" id="R_QSDH" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_QSDH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_pqq_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pqqh2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_QUIDH" sboTerm="SBO:0000176" id="R_QUIDH" name="Quinate dehydrogenase  pyrroloquinoline quinone " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -35773,32 +37558,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_QUINDH">
+            <rdf:Description rdf:about="#R_QUIDH">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.24"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.282"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22366"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22367"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:QUINATE-5-DEHYDROGENASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103398"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.5.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.99.25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01364"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pqq_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_3dhq_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pqqh2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_QUIN_Et" sboTerm="SBO:0000185" id="R_QUIN_Et" name="Quinate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -35936,6 +37715,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG145"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_RBK" sboTerm="SBO:0000176" id="R_RBK" name="Ribokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RBK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103431"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_r5p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_RBK_L1" sboTerm="SBO:0000176" id="R_RBK_L1" name="L-ribulokinase (L-ribulose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36265,64 +38072,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG080"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_RNAMtex" sboTerm="SBO:0000185" id="R_RNAMtex" name="Nicotinamide riboside transport into periplasm" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_RNAMtex">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/33164"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/33165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/33166"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104059"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_rnam_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_rnam_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_RNAMtpp" sboTerm="SBO:0000185" id="R_RNAMtpp" name="Nicotinamide riboside transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_RNAMtpp">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104059"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_rnam_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_rnam_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_RNDR1" sboTerm="SBO:0000176" id="R_RNDR1" name="Ribonucleoside-diphosphate reductase (ADP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36880,41 +38629,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG396"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_SBP" sboTerm="SBO:0000176" id="R_SBP" name="Sedoheptulose-bisphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SBP">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/17462"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/17463"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.37"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SEDOHEPTULOSE-BISPHOSPHATASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104279"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01845"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01345"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_s17bp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_s7p_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_SBTPD" sboTerm="SBO:0000176" id="R_SBTPD" name="Sorbitol-6-phosphate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37071,43 +38785,6 @@
           <speciesReference species="M_sheme_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_SHK3Dr" sboTerm="SBO:0000176" id="R_SHK3Dr" name="Shikimate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SHK3Dr">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.25"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.282"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/17737"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/17738"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/17739"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/17740"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SHIKIMATE-5-DEHYDROGENASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104378"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MTU-964842"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02413"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01740"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_3dhsk_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_skm_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_SHKK" sboTerm="SBO:0000176" id="R_SHKK" name="Shikimate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37144,30 +38821,33 @@
           <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_SO3tex" sboTerm="SBO:0000185" id="R_SO3tex" name="Sulfite transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_SO3R" sboTerm="SBO:0000176" id="R_SO3R" name="Sulfite reductase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SO3tex">
+            <rdf:Description rdf:about="#R_SO3R">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104457"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R10146"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_so3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="5" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_so3_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="3" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_SPMDabc" sboTerm="SBO:0000185" id="R_SPMDabc" name="Spermidine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -37358,6 +39038,60 @@
           <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SUCOAS" sboTerm="SBO:0000176" id="R_SUCOAS" name="Succinyl-CoA synthetase (ADP-forming)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SUCOAS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SUCCCOASYN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-372977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-373134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00285"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SUCpts" sboTerm="SBO:0000185" id="R_SUCpts" name="Sucrose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37396,34 +39130,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_SULR2pp" sboTerm="SBO:0000185" id="R_SULR2pp" name="Sulfite reductase (menaquinol) periplasmic" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SULR2pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104651"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_mql8_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_so3_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2o_p" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_h2s_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mqn8_c" stoichiometry="3" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_SULR_1" sboTerm="SBO:0000176" id="R_SULR_1" name="Sulfite reductase  NADPH2 " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37460,7 +39166,7 @@
           <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_SULabc" sboTerm="SBO:0000185" id="R_SULabc" name="Sulfate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_St" sboTerm="SBO:0000185" id="R_St" name="Sulfur diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -37468,59 +39174,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SULabc">
+            <rdf:Description rdf:about="#R_St">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10192#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10193#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10194#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10195#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.25"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.6.3.25-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-70-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138845"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_TDACPT" sboTerm="SBO:0000176" id="R_TDACPT" name="Tetradecanoyl-ACP acyl-carrier-protein transferase " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_TDACPT">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_myrsACP_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_tdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_s_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TDSK" sboTerm="SBO:0000176" id="R_TDSK" name="Tetraacyldisaccharide 4&apos;kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -38192,118 +39863,110 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TRPt2rpp" sboTerm="SBO:0000185" id="R_TRPt2rpp" name="L-tryptophan reversible transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TRPabc" sboTerm="SBO:0000185" id="R_TRPabc" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TRPt2rpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28879"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28880"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28881"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-76"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05663"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09326"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09709"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TRPabc">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_trp__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trp__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_trp__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_TRPtex" sboTerm="SBO:0000185" id="R_TRPtex" name="L-tryptophan transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+      <reaction metaid="R_U23GAAT" sboTerm="SBO:0000176" id="R_U23GAAT" name="UDP-3-O-(3-hydroxymyristoyl)glucosamine acyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
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+            <rdf:Description rdf:about="#R_U23GAAT">
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+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.191"/>
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         <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3hmrsACP_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_u3hga_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ttdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_u23ga_c" stoichiometry="1" constant="true"/>
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       </reaction>
-      <reaction metaid="R_TTDCAtexi" sboTerm="SBO:0000185" id="R_TTDCAtexi" name="Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_UAG2EMA" sboTerm="SBO:0000176" id="R_UAG2EMA" name="UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
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-            <rdf:Description rdf:about="#R_TTDCAtexi">
+            <rdf:Description rdf:about="#R_UAG2EMA">
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.183"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00292"/>
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             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_ttdca_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ttdca_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acmana_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_U23GAAT" sboTerm="SBO:0000176" id="R_U23GAAT" name="UDP-3-O-(3-hydroxymyristoyl)glucosamine acyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_UAG4Ei" sboTerm="SBO:0000176" id="R_UAG4Ei" name="UDP-N-acetylglucosamine 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -38311,27 +39974,24 @@
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-            <rdf:Description rdf:about="#R_U23GAAT">
+            <rdf:Description rdf:about="#R_UAG4Ei">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04550"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00295"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
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         <listOfReactants>
-          <speciesReference species="M_3hmrsACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_u3hga_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ACP_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_u23ga_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udpacgal_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_UAGAAT" sboTerm="SBO:0000176" id="R_UAGAAT" name="UDP-N-acetylglucosamine acyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -38364,31 +40024,21 @@
           <speciesReference species="M_u3aga_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_UAGCVT" sboTerm="SBO:0000176" id="R_UAGCVT" name="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_UAGCVT_1" sboTerm="SBO:0000176" id="R_UAGCVT_1" name="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_UAGCVT">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00461"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_UAGCVT_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/>
@@ -38398,53 +40048,6 @@
           <speciesReference species="M_uaccg_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_UAGDP" sboTerm="SBO:0000176" id="R_UAGDP" name="UDP-N-acetylglucosamine diphosphorylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_UAGDP">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.23"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105033"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-446204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00293"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_acgam1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_UAGHD" sboTerm="SBO:0000176" id="R_UAGHD" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38593,6 +40196,60 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG382"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UDDH23" sboTerm="SBO:0000176" id="R_UDDH23" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_UDDH23">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_u23ga_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_lipidX_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_UDPACGLP" sboTerm="SBO:0000176" id="R_UDPACGLP" name="UDP N acetylglucosamine diphosphorylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UDPACGLP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.23"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09486"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acgam1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udpacgal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UDPG4E" sboTerm="SBO:0000176" id="R_UDPG4E" name="UDPglucose 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38673,6 +40330,56 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG382"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UGLT" sboTerm="SBO:0000176" id="R_UGLT" name="UDPglucose--hexose-1-phosphate uridylyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UGLT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.12"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTURIDYLYLTRANS-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00701"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gal1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udpg_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UGMDDS" sboTerm="SBO:0000176" id="R_UGMDDS" name="UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38808,6 +40515,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UNK3" sboTerm="SBO:0000176" id="R_UNK3" name="2-keto-4-methylthiobutyrate transamination" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UNK3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.57"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05108"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2kmb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UPPRT" sboTerm="SBO:0000176" id="R_UPPRT" name="Uracil phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39081,41 +40823,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG382"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_USHD" sboTerm="SBO:0000176" id="R_USHD" name="UDP-sugar hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_USHD">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25215"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25216"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.54"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LIPIDXSYNTHESIS-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03130"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_u23ga_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_lipidX_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ump_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_UUPP" sboTerm="SBO:0000176" id="R_UUPP" name="ITP cytidine 5&apos;-phosphotransferase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39144,7 +40851,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG330"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_VALTA" sboTerm="SBO:0000176" id="R_VALTA" name="Valine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_VALDHr" sboTerm="SBO:0000176" id="R_VALDHr" name="Valine dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -39152,34 +40859,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_VALTA">
+            <rdf:Description rdf:about="#R_VALDHr">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24816"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:BRANCHED-CHAINAMINOTRANSFERVAL-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.23"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-13184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01045"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_VALabc" sboTerm="SBO:0000185" id="R_VALabc" name="L-valine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_VALt2r" sboTerm="SBO:0000185" id="R_VALt2r" name="L valine reversible transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -39187,31 +40897,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_VALabc">
+            <rdf:Description rdf:about="#R_VALt2r">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29803#2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29804#2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29805#2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29806#2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-36-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05168"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11190"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
           <speciesReference species="M_val__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_val__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -39363,7 +41067,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_MG290"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_araphe2" sboTerm="SBO:0000176" id="R_araphe2" name="Aromatic amino acid aminotransferase phenylalanine" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_aratyr1" sboTerm="SBO:0000176" id="R_aratyr1" name="Aromatic amino acid aminotransferase tyrosine" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -39371,7 +41075,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_araphe2">
+            <rdf:Description rdf:about="#R_aratyr1">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -39379,12 +41083,12 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phe__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ile__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_34hpp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_leu__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_r0280" sboTerm="SBO:0000176" id="R_r0280" name="DATP:pyruvate O2-phosphotransferase Purine metabolism EC:2.7.1.40" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -39490,16 +41194,6 @@
           <speciesReference species="M_lipopb_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_sink_sheme_c" sboTerm="SBO:0000632" id="R_sink_sheme_c" name="R_sink_sheme_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000632</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_sheme_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_2mba_e" sboTerm="SBO:0000627" id="R_EX_2mba_e" name="R_EX_2mba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39560,24 +41254,24 @@
           <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ac_e" sboTerm="SBO:0000627" id="R_EX_ac_e" name="R_EX_ac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_acald_e" sboTerm="SBO:0000627" id="R_EX_acald_e" name="R_EX_acald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_ac_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_acald_e" sboTerm="SBO:0000627" id="R_EX_acald_e" name="R_EX_acald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_acgam1p_e" sboTerm="SBO:0000627" id="R_EX_acgam1p_e" name="R_EX_acgam1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acgam1p_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_acgam_e" sboTerm="SBO:0000627" id="R_EX_acgam_e" name="R_EX_acgam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -39610,26 +41304,6 @@
           <speciesReference species="M_actn__R_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_adn_e" sboTerm="SBO:0000627" id="R_EX_adn_e" name="R_EX_adn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
-      <reaction metaid="R_EX_akg_e" sboTerm="SBO:0000627" id="R_EX_akg_e" name="R_EX_akg_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_akg_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_ala_L_asp__L_e" sboTerm="SBO:0000627" id="R_EX_ala_L_asp__L_e" name="R_EX_ala_L_asp__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39660,16 +41334,6 @@
           <speciesReference species="M_ala_L_thr__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ala__D_e" sboTerm="SBO:0000627" id="R_EX_ala__D_e" name="R_EX_ala__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_ala__D_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_ala_gln_e" sboTerm="SBO:0000627" id="R_EX_ala_gln_e" name="R_EX_ala_gln_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39720,54 +41384,54 @@
           <speciesReference species="M_alagly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_arab__L_e" sboTerm="SBO:0000627" id="R_EX_arab__L_e" name="R_EX_arab__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_amp_e" sboTerm="SBO:0000627" id="R_EX_amp_e" name="R_EX_amp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_arab__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_arbt6p_e" sboTerm="SBO:0000627" id="R_EX_arbt6p_e" name="R_EX_arbt6p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_arab__L_e" sboTerm="SBO:0000627" id="R_EX_arab__L_e" name="R_EX_arab__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_arbt6p_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_arab__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_arbt_e" sboTerm="SBO:0000627" id="R_EX_arbt_e" name="R_EX_arbt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_arbt6p_e" sboTerm="SBO:0000627" id="R_EX_arbt6p_e" name="R_EX_arbt6p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_arbt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_arbt6p_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_arg__L_e" sboTerm="SBO:0000627" id="R_EX_arg__L_e" name="R_EX_arg__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_arbt_e" sboTerm="SBO:0000627" id="R_EX_arbt_e" name="R_EX_arbt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_arbt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_asp__L_e" sboTerm="SBO:0000627" id="R_EX_asp__L_e" name="R_EX_asp__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_arg__L_e" sboTerm="SBO:0000627" id="R_EX_arg__L_e" name="R_EX_arg__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_btn_e" sboTerm="SBO:0000627" id="R_EX_btn_e" name="R_EX_btn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -39820,6 +41484,16 @@
           <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_chol_e" sboTerm="SBO:0000627" id="R_EX_chol_e" name="R_EX_chol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cit_e" sboTerm="SBO:0000627" id="R_EX_cit_e" name="R_EX_cit_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39840,74 +41514,74 @@
           <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_co2_e" sboTerm="SBO:0000627" id="R_EX_co2_e" name="R_EX_co2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_cmp_e" sboTerm="SBO:0000627" id="R_EX_cmp_e" name="R_EX_cmp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cmp_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_coa_e" sboTerm="SBO:0000627" id="R_EX_coa_e" name="R_EX_coa_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_co2_e" sboTerm="SBO:0000627" id="R_EX_co2_e" name="R_EX_co2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_coa_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_cobalt2_e" sboTerm="SBO:0000627" id="R_EX_cobalt2_e" name="R_EX_cobalt2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_coa_e" sboTerm="SBO:0000627" id="R_EX_coa_e" name="R_EX_coa_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_cobalt2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_cu2_e" sboTerm="SBO:0000627" id="R_EX_cu2_e" name="R_EX_cu2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_cobalt2_e" sboTerm="SBO:0000627" id="R_EX_cobalt2_e" name="R_EX_cobalt2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cobalt2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_cys__L_e" sboTerm="SBO:0000627" id="R_EX_cys__L_e" name="R_EX_cys__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_cu2_e" sboTerm="SBO:0000627" id="R_EX_cu2_e" name="R_EX_cu2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_cytd_e" sboTerm="SBO:0000627" id="R_EX_cytd_e" name="R_EX_cytd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_ddca_e" sboTerm="SBO:0000627" id="R_EX_ddca_e" name="R_EX_ddca_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_cytd_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddca_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_dad_2_e" sboTerm="SBO:0000627" id="R_EX_dad_2_e" name="R_EX_dad_2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_dha_e" sboTerm="SBO:0000627" id="R_EX_dha_e" name="R_EX_dha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_dad_2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_drib_e" sboTerm="SBO:0000627" id="R_EX_drib_e" name="R_EX_drib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -39960,6 +41634,16 @@
           <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_fe3pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_kt_e" name="R_EX_fe3pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_fol_e" sboTerm="SBO:0000627" id="R_EX_fol_e" name="R_EX_fol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39990,6 +41674,16 @@
           <speciesReference species="M_fru_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_g3pc_e" sboTerm="SBO:0000627" id="R_EX_g3pc_e" name="R_EX_g3pc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_g3pc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_g3pe_e" sboTerm="SBO:0000627" id="R_EX_g3pe_e" name="R_EX_g3pe_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40010,6 +41704,26 @@
           <speciesReference species="M_g3pg_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_g3pi_e" sboTerm="SBO:0000627" id="R_EX_g3pi_e" name="R_EX_g3pi_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_g3pi_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_g3ps_e" sboTerm="SBO:0000627" id="R_EX_g3ps_e" name="R_EX_g3ps_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_g3ps_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_gal_e" sboTerm="SBO:0000627" id="R_EX_gal_e" name="R_EX_gal_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40170,16 +41884,6 @@
           <speciesReference species="M_gly_tyr_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_glyc3p_e" sboTerm="SBO:0000627" id="R_EX_glyc3p_e" name="R_EX_glyc3p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_glyc3p_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_glyc_e" sboTerm="SBO:0000627" id="R_EX_glyc_e" name="R_EX_glyc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40200,34 +41904,34 @@
           <speciesReference species="M_glyglygln_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_gsn_e" sboTerm="SBO:0000627" id="R_EX_gsn_e" name="R_EX_gsn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_gthrd_e" sboTerm="SBO:0000627" id="R_EX_gthrd_e" name="R_EX_gthrd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_gsn_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gthrd_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_gthrd_e" sboTerm="SBO:0000627" id="R_EX_gthrd_e" name="R_EX_gthrd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_gua_e" sboTerm="SBO:0000627" id="R_EX_gua_e" name="R_EX_gua_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_gthrd_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gua_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_gua_e" sboTerm="SBO:0000627" id="R_EX_gua_e" name="R_EX_gua_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_h2o_e" sboTerm="SBO:0000627" id="R_EX_h2o_e" name="R_EX_h2o_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_gua_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_h2s_e" sboTerm="SBO:0000627" id="R_EX_h2s_e" name="R_EX_h2s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -40260,16 +41964,6 @@
           <speciesReference species="M_hdca_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ile__L_e" sboTerm="SBO:0000627" id="R_EX_ile__L_e" name="R_EX_ile__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_ile__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_inost_e" sboTerm="SBO:0000627" id="R_EX_inost_e" name="R_EX_inost_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40290,34 +41984,24 @@
           <speciesReference species="M_k_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_lac__D_e" sboTerm="SBO:0000627" id="R_EX_lac__D_e" name="R_EX_lac__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_lac__D_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
-      <reaction metaid="R_EX_leu__L_e" sboTerm="SBO:0000627" id="R_EX_leu__L_e" name="R_EX_leu__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_lipoate_e" sboTerm="SBO:0000627" id="R_EX_lipoate_e" name="R_EX_lipoate_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_leu__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lipoate_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_lipoate_e" sboTerm="SBO:0000627" id="R_EX_lipoate_e" name="R_EX_lipoate_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_lys__L_e" sboTerm="SBO:0000627" id="R_EX_lys__L_e" name="R_EX_lys__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_lipoate_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_lysglugly_e" sboTerm="SBO:0000627" id="R_EX_lysglugly_e" name="R_EX_lysglugly_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -40340,16 +42024,6 @@
           <speciesReference species="M_malt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_man1p_e" sboTerm="SBO:0000627" id="R_EX_man1p_e" name="R_EX_man1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_man1p_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_man_e" sboTerm="SBO:0000627" id="R_EX_man_e" name="R_EX_man_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40400,26 +42074,6 @@
           <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_metsox_R__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_R__L_e" name="R_EX_metsox_R__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
-      <reaction metaid="R_EX_metsox_S__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_S__L_e" name="R_EX_metsox_S__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_mg2_e" sboTerm="SBO:0000627" id="R_EX_mg2_e" name="R_EX_mg2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40440,24 +42094,24 @@
           <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_mnl1p_e" sboTerm="SBO:0000627" id="R_EX_mnl1p_e" name="R_EX_mnl1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_mnl_e" sboTerm="SBO:0000627" id="R_EX_mnl_e" name="R_EX_mnl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_mnl1p_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mnl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_mnl_e" sboTerm="SBO:0000627" id="R_EX_mnl_e" name="R_EX_mnl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_ncam_e" sboTerm="SBO:0000627" id="R_EX_ncam_e" name="R_EX_ncam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_mnl_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ncam_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_nh4_e" sboTerm="SBO:0000627" id="R_EX_nh4_e" name="R_EX_nh4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -40480,6 +42134,16 @@
           <speciesReference species="M_nmn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_no2_e" sboTerm="SBO:0000627" id="R_EX_no2_e" name="R_EX_no2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_no2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_o2_e" sboTerm="SBO:0000627" id="R_EX_o2_e" name="R_EX_o2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40570,6 +42234,16 @@
           <speciesReference species="M_ptrc_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_pyovd_kt_e" name="R_EX_pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_quin_e" sboTerm="SBO:0000627" id="R_EX_quin_e" name="R_EX_quin_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40610,14 +42284,14 @@
           <speciesReference species="M_rmn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_rnam_e" sboTerm="SBO:0000627" id="R_EX_rnam_e" name="R_EX_rnam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_s_e" sboTerm="SBO:0000627" id="R_EX_s_e" name="R_EX_s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_rnam_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_sbt__D_e" sboTerm="SBO:0000627" id="R_EX_sbt__D_e" name="R_EX_sbt__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -40650,26 +42324,6 @@
           <speciesReference species="M_sheme_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_so3_e" sboTerm="SBO:0000627" id="R_EX_so3_e" name="R_EX_so3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_so3_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
-      <reaction metaid="R_EX_so4_e" sboTerm="SBO:0000627" id="R_EX_so4_e" name="R_EX_so4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_so4_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_spmd_e" sboTerm="SBO:0000627" id="R_EX_spmd_e" name="R_EX_spmd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40760,16 +42414,6 @@
           <speciesReference species="M_trp__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_ttdca_e" sboTerm="SBO:0000627" id="R_EX_ttdca_e" name="R_EX_ttdca_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_ttdca_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_val__L_e" sboTerm="SBO:0000627" id="R_EX_val__L_e" name="R_EX_val__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40938,43 +42582,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG429" sboTerm="SBO:0000243" fbc:id="G_MG429" fbc:name="G_MG429" fbc:label="G_MG429">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG429">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008279"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183J1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183J1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008279"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023151"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P08838"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG041" sboTerm="SBO:0000243" fbc:id="G_MG041" fbc:name="G_MG041" fbc:label="G_MG041">
+      <fbc:geneProduct metaid="G_spontaneous" sboTerm="SBO:0000243" fbc:id="G_spontaneous" fbc:name="G_spontaneous" fbc:label="G_spontaneous">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41010,7 +42618,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG357" sboTerm="SBO:0000243" fbc:id="G_MG357" fbc:name="G_MG357" fbc:label="G_MG357">
+      <fbc:geneProduct metaid="G_MG041" sboTerm="SBO:0000243" fbc:id="G_MG041" fbc:name="G_MG041" fbc:label="G_MG041">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG429" sboTerm="SBO:0000243" fbc:id="G_MG429" fbc:name="G_MG429" fbc:label="G_MG429">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41018,22 +42633,35 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG357">
+            <rdf:Description rdf:about="#G_MG429">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004372"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023865"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P37877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183J1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183J1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P08838"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG274" sboTerm="SBO:0000243" fbc:id="G_MG274" fbc:name="G_MG274" fbc:label="G_MG274">
+      <fbc:geneProduct metaid="G_MG357" sboTerm="SBO:0000243" fbc:id="G_MG357" fbc:name="G_MG357" fbc:label="G_MG357">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41041,15 +42669,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG274">
+            <rdf:Description rdf:about="#G_MG357">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888583"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017596"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10207"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P21881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P37877"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -41087,6 +42715,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG274" sboTerm="SBO:0000243" fbc:id="G_MG274" fbc:name="G_MG274" fbc:label="G_MG274">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_MG274">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P21881"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG263" sboTerm="SBO:0000243" fbc:id="G_MG263" fbc:name="G_MG263" fbc:label="G_MG263">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41133,7 +42784,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG065" sboTerm="SBO:0000243" fbc:id="G_MG065" fbc:name="G_MG065" fbc:label="G_MG065">
+      <fbc:geneProduct metaid="G_MG526" sboTerm="SBO:0000243" fbc:id="G_MG526" fbc:name="G_MG526" fbc:label="G_MG526">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41141,22 +42792,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG065">
+            <rdf:Description rdf:about="#G_MG526">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187Q7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187Q7"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG526" sboTerm="SBO:0000243" fbc:id="G_MG526" fbc:name="G_MG526" fbc:label="G_MG526">
+      <fbc:geneProduct metaid="G_MG065" sboTerm="SBO:0000243" fbc:id="G_MG065" fbc:name="G_MG065" fbc:label="G_MG065">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41164,15 +42815,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG526">
+            <rdf:Description rdf:about="#G_MG065">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187Q7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187Q7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34392"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -41259,7 +42910,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG276" sboTerm="SBO:0000243" fbc:id="G_MG276" fbc:name="G_MG276" fbc:label="G_MG276">
+      <fbc:geneProduct metaid="G_MG458" sboTerm="SBO:0000243" fbc:id="G_MG458" fbc:name="G_MG458" fbc:label="G_MG458">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41267,31 +42918,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG276">
+            <rdf:Description rdf:about="#G_MG458">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/102600"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hprd/00029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/353"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS32511.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS45546.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100765665"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899280"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11821"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS40503.1"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002375"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCF7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183C4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183C4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P37472"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG458" sboTerm="SBO:0000243" fbc:id="G_MG458" fbc:name="G_MG458" fbc:label="G_MG458">
+      <fbc:geneProduct metaid="G_MG276" sboTerm="SBO:0000243" fbc:id="G_MG276" fbc:name="G_MG276" fbc:label="G_MG276">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -41299,19 +42945,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG458">
+            <rdf:Description rdf:about="#G_MG276">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/102600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hprd/00029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS32511.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS45546.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100765665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899280"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS40503.1"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029057"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183C4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183C4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029057"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P37472"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCF7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175938"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -41434,6 +43085,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG085" sboTerm="SBO:0000243" fbc:id="G_MG085" fbc:name="G_MG085" fbc:label="G_MG085">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG324" sboTerm="SBO:0000243" fbc:id="G_MG324" fbc:name="G_MG324" fbc:label="G_MG324">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41639,26 +43297,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG181" sboTerm="SBO:0000243" fbc:id="G_MG181" fbc:name="G_MG181" fbc:label="G_MG181">
+      <fbc:geneProduct metaid="G_MG179" sboTerm="SBO:0000243" fbc:id="G_MG179" fbc:name="G_MG179" fbc:label="G_MG179">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG181">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CJ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CJ3"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG180" sboTerm="SBO:0000243" fbc:id="G_MG180" fbc:name="G_MG180" fbc:label="G_MG180">
         <notes>
@@ -41683,12 +43327,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG179" sboTerm="SBO:0000243" fbc:id="G_MG179" fbc:name="G_MG179" fbc:label="G_MG179">
+      <fbc:geneProduct metaid="G_MG181" sboTerm="SBO:0000243" fbc:id="G_MG181" fbc:name="G_MG181" fbc:label="G_MG181">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_MG181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CJ3"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG071" sboTerm="SBO:0000243" fbc:id="G_MG071" fbc:name="G_MG071" fbc:label="G_MG071">
         <notes>
@@ -41972,39 +43630,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG051" sboTerm="SBO:0000243" fbc:id="G_MG051" fbc:name="G_MG051" fbc:label="G_MG051">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG051">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000312"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013102"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18B84"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18B84"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000312"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013102"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10985"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39142"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG049" sboTerm="SBO:0000243" fbc:id="G_MG049" fbc:name="G_MG049" fbc:label="G_MG049">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42026,6 +43651,39 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG051" sboTerm="SBO:0000243" fbc:id="G_MG051" fbc:name="G_MG051" fbc:label="G_MG051">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_MG051">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18B84"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18B84"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39142"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG407" sboTerm="SBO:0000243" fbc:id="G_MG407" fbc:name="G_MG407" fbc:label="G_MG407">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42284,7 +43942,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG039" sboTerm="SBO:0000243" fbc:id="G_MG039" fbc:name="G_MG039" fbc:label="G_MG039">
+      <fbc:geneProduct metaid="G_MG187" sboTerm="SBO:0000243" fbc:id="G_MG187" fbc:name="G_MG187" fbc:label="G_MG187">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -42292,17 +43950,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG039">
+            <rdf:Description rdf:about="#G_MG187">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898043"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q74R28"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176627"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG187" sboTerm="SBO:0000243" fbc:id="G_MG187" fbc:name="G_MG187" fbc:label="G_MG187">
+      <fbc:geneProduct metaid="G_MG039" sboTerm="SBO:0000243" fbc:id="G_MG039" fbc:name="G_MG039" fbc:label="G_MG039">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -42310,18 +43976,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG187">
+            <rdf:Description rdf:about="#G_MG039">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897424"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q74R28"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898043"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -42527,13 +44185,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG293" sboTerm="SBO:0000243" fbc:id="G_MG293" fbc:name="G_MG293" fbc:label="G_MG293">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG385" sboTerm="SBO:0000243" fbc:id="G_MG385" fbc:name="G_MG385" fbc:label="G_MG385">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42552,6 +44203,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG293" sboTerm="SBO:0000243" fbc:id="G_MG293" fbc:name="G_MG293" fbc:label="G_MG293">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG222" sboTerm="SBO:0000243" fbc:id="G_MG222" fbc:name="G_MG222" fbc:label="G_MG222">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42976,7 +44634,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG384" sboTerm="SBO:0000243" fbc:id="G_MG384" fbc:name="G_MG384" fbc:label="G_MG384">
+      <fbc:geneProduct metaid="G_MG451" sboTerm="SBO:0000243" fbc:id="G_MG451" fbc:name="G_MG451" fbc:label="G_MG451">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG089" sboTerm="SBO:0000243" fbc:id="G_MG089" fbc:name="G_MG089" fbc:label="G_MG089">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -42984,27 +44649,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG384">
+            <rdf:Description rdf:about="#G_MG089">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013661"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25519"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888240"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG451" sboTerm="SBO:0000243" fbc:id="G_MG451" fbc:name="G_MG451" fbc:label="G_MG451">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG089" sboTerm="SBO:0000243" fbc:id="G_MG089" fbc:name="G_MG089" fbc:label="G_MG089">
+      <fbc:geneProduct metaid="G_MG384" sboTerm="SBO:0000243" fbc:id="G_MG384" fbc:name="G_MG384" fbc:label="G_MG384">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -43012,10 +44667,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG089">
+            <rdf:Description rdf:about="#G_MG384">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10437"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -43218,6 +44876,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG412" sboTerm="SBO:0000243" fbc:id="G_MG412" fbc:name="G_MG412" fbc:label="G_MG412">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_MG412">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B2"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG410" sboTerm="SBO:0000243" fbc:id="G_MG410" fbc:name="G_MG410" fbc:label="G_MG410">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43287,27 +44966,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG412" sboTerm="SBO:0000243" fbc:id="G_MG412" fbc:name="G_MG412" fbc:label="G_MG412">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG412">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011862"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B2"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG053" sboTerm="SBO:0000243" fbc:id="G_MG053" fbc:name="G_MG053" fbc:label="G_MG053">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43341,6 +44999,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_MG079" sboTerm="SBO:0000243" fbc:id="G_MG079" fbc:name="G_MG079" fbc:label="G_MG079">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG078" sboTerm="SBO:0000243" fbc:id="G_MG078" fbc:name="G_MG078" fbc:label="G_MG078">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43359,13 +45024,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG079" sboTerm="SBO:0000243" fbc:id="G_MG079" fbc:name="G_MG079" fbc:label="G_MG079">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG058" sboTerm="SBO:0000243" fbc:id="G_MG058" fbc:name="G_MG058" fbc:label="G_MG058">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43412,12 +45070,31 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG043" sboTerm="SBO:0000243" fbc:id="G_MG043" fbc:name="G_MG043" fbc:label="G_MG043">
+      <fbc:geneProduct metaid="G_MG042" sboTerm="SBO:0000243" fbc:id="G_MG042" fbc:name="G_MG042" fbc:label="G_MG042">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_MG042">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AM3"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG044" sboTerm="SBO:0000243" fbc:id="G_MG044" fbc:name="G_MG044" fbc:label="G_MG044">
         <notes>
@@ -43440,31 +45117,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG042" sboTerm="SBO:0000243" fbc:id="G_MG042" fbc:name="G_MG042" fbc:label="G_MG042">
+      <fbc:geneProduct metaid="G_MG043" sboTerm="SBO:0000243" fbc:id="G_MG043" fbc:name="G_MG043" fbc:label="G_MG043">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG042">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005893"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017879"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AM3"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_MG112" sboTerm="SBO:0000243" fbc:id="G_MG112" fbc:name="G_MG112" fbc:label="G_MG112">
         <notes>
@@ -43516,7 +45174,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG231" sboTerm="SBO:0000243" fbc:id="G_MG231" fbc:name="G_MG231" fbc:label="G_MG231">
+      <fbc:geneProduct metaid="G_MG229" sboTerm="SBO:0000243" fbc:id="G_MG229" fbc:name="G_MG229" fbc:label="G_MG229">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -43524,28 +45182,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG231">
+            <rdf:Description rdf:about="#G_MG229">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888869"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008806"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947155"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000788"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013509"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDN7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJT2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175480"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_MG229" sboTerm="SBO:0000243" fbc:id="G_MG229" fbc:name="G_MG229" fbc:label="G_MG229">
+      <fbc:geneProduct metaid="G_MG231" sboTerm="SBO:0000243" fbc:id="G_MG231" fbc:name="G_MG231" fbc:label="G_MG231">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -43553,20 +45210,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_MG229">
+            <rdf:Description rdf:about="#G_MG231">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008808"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37146"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947149"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12381"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000358"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJT2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDN7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175481"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
diff --git a/carveme/data/benchmark/models/paer.xml b/carveme/data/benchmark/models/paer.xml
index 63eb28e..157b219 100644
--- a/carveme/data/benchmark/models/paer.xml
+++ b/carveme/data/benchmark/models/paer.xml
@@ -3,7 +3,7 @@
   <model metaid="paer" id="paer" fbc:strict="true">
     <notes>
       <html xmlns="http://www.w3.org/1999/xhtml">
-        <p>Description: This model was built with CarveMe version 1.4.1</p>
+        <p>Description: This model was built with CarveMe version 1.5.0</p>
       </html>
     </notes>
     <listOfCompartments>
@@ -888,6 +888,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_23dhbzs2_c" sboTerm="SBO:0000247" id="M_23dhbzs2_c" name="2-3-dihydroxybenzoylserine dimer" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C20H19N2O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C20H19N2O11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_23dhbzs2_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147716"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_23dhbzs3_c" sboTerm="SBO:0000247" id="M_23dhbzs3_c" name="2-3-dihydroxybenzoylserine trimer" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30H28N3O16">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C30H28N3O16</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_23dhbzs3_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM145882"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_23dhbzs_c" sboTerm="SBO:0000247" id="M_23dhbzs_c" name="2,3-dihydroxybenzoylserine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H10NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H10NO6</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_23dhbzs_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-23-DIHYDROXYBENZOYL-L-SERINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1487"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VDTYHTVHFIIEIL-LURJTMIESA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15332"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_23dhdp_c" sboTerm="SBO:0000247" id="M_23dhdp_c" name="2,3-Dihydrodipicolinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C7H5NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -1075,6 +1143,116 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_25dhpp_c" sboTerm="SBO:0000247" id="M_25dhpp_c" name="2 5 Diamino 6 hydroxy 4  5  phosphoribosylamino  pyrimidine C9H14N5O8P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H14N5O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H14N5O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_25dhpp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90906"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_25dkglcn_c" sboTerm="SBO:0000247" id="M_25dkglcn_c" name="2,5-diketo-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H7O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H7O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_25dkglcn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:25-DIDEHYDRO-D-GLUCONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM936"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RXMWXENJQAINCC-DMTCNVIQSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01793"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_25dkglcn_e" sboTerm="SBO:0000247" id="M_25dkglcn_e" name="2,5-diketo-D-gluconate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H7O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H7O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_25dkglcn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:25-DIDEHYDRO-D-GLUCONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM936"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RXMWXENJQAINCC-DMTCNVIQSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01793"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_25dkglcn_p" sboTerm="SBO:0000247" id="M_25dkglcn_p" name="2,5-diketo-D-gluconate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H7O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H7O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_25dkglcn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:25-DIDEHYDRO-D-GLUCONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM936"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RXMWXENJQAINCC-DMTCNVIQSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01793"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_25dop_c" sboTerm="SBO:0000247" id="M_25dop_c" name="2 5 Dioxopentanoate C5H5O4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H5O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2012,6 +2190,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2ddara_c" sboTerm="SBO:0000247" id="M_2ddara_c" name="2-dehydro-3-deoxy-D-arabinonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O5</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2ddara_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_2ddg6p_c" sboTerm="SBO:0000247" id="M_2ddg6p_c" name="2-Dehydro-3-deoxy-D-gluconate 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H8O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2074,6 +2269,65 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2dh3dgal6p_c" sboTerm="SBO:0000247" id="M_2dh3dgal6p_c" name="2-Dehydro-3-deoxy-D-galactonate 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H8O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O9P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2dh3dgal6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEHYDRO-DEOXY-GALACTONATE-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90136"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OVPRPPOVAXRCED-NQXXGFSBSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00945"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2dh3dgal_c" sboTerm="SBO:0000247" id="M_2dh3dgal_c" name="2-Dehydro-3-deoxy-D-galactonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9O6</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2dh3dgal_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01216"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-DEHYDRO-3-DEOXY-D-GALACTONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1627"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WPAMZTWLKIDIOP-NQXXGFSBSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00894"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2dhglcn_c" sboTerm="SBO:0000247" id="M_2dhglcn_c" name="2-Dehydro-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2390,6 +2644,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2hyoxplac_c" sboTerm="SBO:0000247" id="M_2hyoxplac_c" name="2-Hydroxyphenylacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H7O3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2hyoxplac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05852"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CCVYRRGZDBSHFU-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-11495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2ins_c" sboTerm="SBO:0000247" id="M_2ins_c" name="2-Inosose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H10O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2787,6 +3070,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2mop_c" sboTerm="SBO:0000247" id="M_2mop_c" name="2-Methyl-3-oxopropanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H5O3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2mop_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01060193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM305"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VOKUMXABRRXHAR-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd23282"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2mp2coa_c" sboTerm="SBO:0000247" id="M_2mp2coa_c" name="2-Methylprop-2-enoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3059,81 +3376,90 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_34dhbz_c" sboTerm="SBO:0000247" id="M_34dhbz_c" name="3,4-Dihydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+      <species metaid="M_2pglyc_c" sboTerm="SBO:0000247" id="M_2pglyc_c" name="2-Phosphoglycolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H5O4</p>
-            <p>CHARGE: -1</p>
+            <p>FORMULA: C2H2O6P</p>
+            <p>CHARGE: -3</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_34dhbz_c">
+            <rdf:Description rdf:about="#M_2pglyc_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1380"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14955"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19879"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36241"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01856"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-4-DIHYDROXYBENZOATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM204"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YQUVCSBJEUQKSH-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00197"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ASCFNMCAHFUBCO-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-67"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00727"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_34dhbz_e" sboTerm="SBO:0000247" id="M_34dhbz_e" name="3,4-Dihydroxybenzoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+      <species metaid="M_2pglyc_e" sboTerm="SBO:0000247" id="M_2pglyc_e" name="2-Phosphoglycolate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H5O4</p>
-            <p>CHARGE: -1</p>
+            <p>FORMULA: C2H2O6P</p>
+            <p>CHARGE: -3</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_34dhbz_e">
+            <rdf:Description rdf:about="#M_2pglyc_e">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1380"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14955"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19879"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36241"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01856"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-4-DIHYDROXYBENZOATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM204"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YQUVCSBJEUQKSH-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00197"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ASCFNMCAHFUBCO-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-67"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00727"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_34dhbz_p" sboTerm="SBO:0000247" id="M_34dhbz_p" name="3,4-Dihydroxybenzoate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+      <species metaid="M_2ptcoa_c" sboTerm="SBO:0000247" id="M_2ptcoa_c" name="2 Pentenoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2ptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_34dhbz_c" sboTerm="SBO:0000247" id="M_34dhbz_c" name="3,4-Dihydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C7H5O4</p>
@@ -3143,7 +3469,81 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_34dhbz_p">
+            <rdf:Description rdf:about="#M_34dhbz_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-4-DIHYDROXYBENZOATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM204"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YQUVCSBJEUQKSH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00197"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_34dhbz_e" sboTerm="SBO:0000247" id="M_34dhbz_e" name="3,4-Dihydroxybenzoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhbz_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36241"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-4-DIHYDROXYBENZOATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM204"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YQUVCSBJEUQKSH-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00197"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_34dhbz_p" sboTerm="SBO:0000247" id="M_34dhbz_p" name="3,4-Dihydroxybenzoate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_34dhbz_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-175977"/>
@@ -3589,6 +3989,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3dhgulnp_c" sboTerm="SBO:0000247" id="M_3dhgulnp_c" name="3-keto-L-gulonate-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H8O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O10P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3dhgulnp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BDUIIKXSXFDPEC-LWKDLAHASA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C14899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-2343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10596"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3dhq_c" sboTerm="SBO:0000247" id="M_3dhq_c" name="3-Dehydroquinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H9O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3929,6 +4355,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3hbycoa_c" sboTerm="SBO:0000247" id="M_3hbycoa_c" name=" S  3 Hydroxybutyryl CoA C25H38N7O18P3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H38N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H38N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3hbycoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-77251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:S-3-HYDROXYBUTANOYL-COA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM446"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QHHKKMYHDBRONY-VKBDFPRVSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00842"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3hdcoa_c" sboTerm="SBO:0000247" id="M_3hdcoa_c" name="(S)-3-Hydroxydecanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C31H50N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5898,6 +6356,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3ptcoa_c" sboTerm="SBO:0000247" id="M_3ptcoa_c" name="3 Pentenoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_3ptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_3uib_c" sboTerm="SBO:0000247" id="M_3uib_c" name="3-Ureidoisobutyrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6172,40 +6647,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_4abz_e" sboTerm="SBO:0000247" id="M_4abz_e" name="4-Aminobenzoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H6NO2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H6NO2</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_4abz_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ALYNCZNDIQEVRV-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00568"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:113372"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11959"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20314"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20315"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44778"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:P-AMINO-BENZOATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM421"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00443"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_4adcho_c" sboTerm="SBO:0000247" id="M_4adcho_c" name="4-amino-4-deoxychorismate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C10H10NO5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6470,39 +6911,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_4h2oglt_c" sboTerm="SBO:0000247" id="M_4h2oglt_c" name="4 Hydroxy 2 oxoglutarate C5H4O6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H4O6">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H4O6</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_4h2oglt_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01127"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17742"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1838"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20375"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01479"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02070"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM894"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WXSKVKPSMAHCSG-UHFFFAOYSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00830"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_4hadnt_c" sboTerm="SBO:0000247" id="M_4hadnt_c" name="4 Hydroxylamino 2 6 dinitrotoluene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HNO">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6574,6 +6982,66 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hbald_e" sboTerm="SBO:0000247" id="M_4hbald_e" name="4-Hydroxybenzaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbald_p" sboTerm="SBO:0000247" id="M_4hbald_p" name="4-Hydroxybenzaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4hbz_c" sboTerm="SBO:0000247" id="M_4hbz_c" name="4-Hydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6673,6 +7141,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hglusa_c" sboTerm="SBO:0000247" id="M_4hglusa_c" name="L 4 Hydroxyglutamate semialdehyde C5H9NO4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H9NO4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9NO4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hglusa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62637"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-4-HYDROXYGLUTAMATE_SEMIALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2687"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XCXUZPXOFFRGGP-DMTCNVIQSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03530"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4hoxpac_c" sboTerm="SBO:0000247" id="M_4hoxpac_c" name="4 Hydroxyphenylacetic acid C8H8O3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H7O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6837,40 +7334,6 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
-      <species metaid="M_4hpro_DC_e" sboTerm="SBO:0000247" id="M_4hpro_DC_e" name="Cis 4 Hydroxy D proline" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9NO3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H9NO3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#M_4hpro_DC_e">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-      </species>
-      <species metaid="M_4hpro_DC_p" sboTerm="SBO:0000247" id="M_4hpro_DC_p" name="Cis 4 Hydroxy D proline" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9NO3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H9NO3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#M_4hpro_DC_p">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-      </species>
       <species metaid="M_4hpro_LT_c" sboTerm="SBO:0000247" id="M_4hpro_LT_c" name="Trans 4 Hydroxy L proline C5H9NO3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H9NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6917,6 +7380,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hptcoa_c" sboTerm="SBO:0000247" id="M_4hptcoa_c" name="4 Hydroxypentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H40N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H40N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4hptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4hthr_c" sboTerm="SBO:0000247" id="M_4hthr_c" name="4-Hydroxy-L-threonine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7147,6 +7627,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4oxptcoa_c" sboTerm="SBO:0000247" id="M_4oxptcoa_c" name="4 Oxopentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_4oxptn_c" sboTerm="SBO:0000247" id="M_4oxptn_c" name="4 Oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptn_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_4oxptn_e" sboTerm="SBO:0000247" id="M_4oxptn_e" name="4 Oxopentanoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptn_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_4oxptn_p" sboTerm="SBO:0000247" id="M_4oxptn_p" name="4 Oxopentanoate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptn_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4pasp_c" sboTerm="SBO:0000247" id="M_4pasp_c" name="4-Phospho-L-aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H6NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7210,6 +7758,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4poptcoa_c" sboTerm="SBO:0000247" id="M_4poptcoa_c" name="4 Phosphooxypentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H39N7O21P4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H39N7O21P4S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4poptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4ppan_c" sboTerm="SBO:0000247" id="M_4ppan_c" name="D-4&apos;-Phosphopantothenate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C9H15NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7803,6 +8368,56 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5drib_c" sboTerm="SBO:0000247" id="M_5drib_c" name="5&apos;-deoxyribose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5drib_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4391"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WDRISBUVHBMJEF-MROZADKFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd17002"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_5drib_e" sboTerm="SBO:0000247" id="M_5drib_e" name="5&apos;-deoxyribose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_5drib_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4391"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WDRISBUVHBMJEF-MROZADKFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd17002"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_5fthf_c" sboTerm="SBO:0000247" id="M_5fthf_c" name="5-Formyltetrahydrofolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C20H21N7O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8187,6 +8802,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_6apa_p" sboTerm="SBO:0000247" id="M_6apa_p" name="6 Aminopenicillanic acid C8H12N2O3S" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H12N2O3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12N2O3S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6apa_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60618"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-AMINOPENICILLANATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2495"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NGHVIOIJCVXTGV-ALEPSDHESA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01896"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_6ath2coa_c" sboTerm="SBO:0000247" id="M_6ath2coa_c" name="6 acetylthiohex 2 enoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C23H32N7O15P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8255,6 +8902,96 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_6hnac_c" sboTerm="SBO:0000247" id="M_6hnac_c" name="6-Hydroxynicotinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_6hnac_e" sboTerm="SBO:0000247" id="M_6hnac_e" name="6-Hydroxynicotinate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_6hnac_p" sboTerm="SBO:0000247" id="M_6hnac_p" name="6-Hydroxynicotinate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_6p2dhglcn_c" sboTerm="SBO:0000247" id="M_6p2dhglcn_c" name="6-Phospho-2-dehydro-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H11O10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8675,6 +9412,108 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_Lcyst_c" sboTerm="SBO:0000247" id="M_Lcyst_c" name="L-Cysteate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H6NO5S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6NO5S</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_Lcyst_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5673778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00506"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44513"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-CYSTEATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM713"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XVOYSCVBGLVSOL-REOHCLBHSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00395"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_Lcyst_e" sboTerm="SBO:0000247" id="M_Lcyst_e" name="L-Cysteate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H6NO5S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6NO5S</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_Lcyst_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5673778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00506"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44513"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-CYSTEATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM713"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XVOYSCVBGLVSOL-REOHCLBHSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00395"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_Lcyst_p" sboTerm="SBO:0000247" id="M_Lcyst_p" name="L-Cysteate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H6NO5S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6NO5S</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_Lcyst_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5673778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00506"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44513"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-CYSTEATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM713"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XVOYSCVBGLVSOL-REOHCLBHSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00395"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_Lpipecol_c" sboTerm="SBO:0000247" id="M_Lpipecol_c" name="L-pipecolic acid; piperidine-2-carboxylic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H11NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9513,6 +10352,40 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_R_3hppta_e" sboTerm="SBO:0000247" id="M_R_3hppta_e" name=" 3 Hydroxy 5 phenylpentanoic acic" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C11H11O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H11O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3hppta_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_R_3hppta_p" sboTerm="SBO:0000247" id="M_R_3hppta_p" name=" 3 Hydroxy 5 phenylpentanoic acic" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C11H11O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H11O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3hppta_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_R_3hpptcoa_c" sboTerm="SBO:0000247" id="M_R_3hpptcoa_c" name=" 3 Hydroxyphenylpentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C32H42N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9808,39 +10681,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_aact_c" sboTerm="SBO:0000247" id="M_aact_c" name="Aminoacetone" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C3H8NO">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C3H8NO</p>
-            <p>CHARGE: 1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_aact_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BCDGQXUMWHRQCB-UHFFFAOYSA-O"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13767"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2648"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58320"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02134"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60177"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMINO-ACETONE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1106"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01298"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_aad_c" sboTerm="SBO:0000247" id="M_aad_c" name="Acetyl-adenylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H14N5O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10584,6 +11424,71 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_acmana_e" sboTerm="SBO:0000247" id="M_acmana_e" name="N-Acetyl-D-mannosamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H15NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acmana_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-4085214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7141"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62724"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MBLBDJOUHNCFQT-XAMCCFCMSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-acetyl-D-mannosamine"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2403"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00492"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_acmanap_c" sboTerm="SBO:0000247" id="M_acmanap_c" name="N-Acetyl-D-mannosamine 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H14NO9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H14NO9P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acmanap_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-4085225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:62168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-ACETYL-D-MANNOSAMINE-6P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4708"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QDSLHWJDSQGPEE-WCTZXXKLSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02612"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_acmum6p_c" sboTerm="SBO:0000247" id="M_acmum6p_c" name="N-acetylmuramate 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C11H17NO11P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13099,6 +14004,27 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_anhgm_e" sboTerm="SBO:0000247" id="M_anhgm_e" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C19H29N2O12">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H29N2O12</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_anhgm_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15396"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_anhgm_p" sboTerm="SBO:0000247" id="M_anhgm_p" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C19H29N2O12">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13361,34 +14287,6 @@
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         </annotation>
       </species>
-      <species metaid="M_applp_c" sboTerm="SBO:0000247" id="M_applp_c" name="D-1-Aminopropan-2-ol O-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H9NO4P">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C3H9NO4P</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_applp_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04122"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28390"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4076"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:R-1-AMINOPROPAN-2-YL-PHOSPHATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1697"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YBOLZUJJGUZUDC-GSVOUGTGSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02547"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_aps_c" sboTerm="SBO:0000247" id="M_aps_c" name="Adenosine 5&apos;-phosphosulfate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O10PS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13874,6 +14772,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ascb6p_c" sboTerm="SBO:0000247" id="M_ascb6p_c" name="L-ascorbate-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H7O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H7O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ascb6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:80368"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KIENGQUGHPTFGC-JLAZNSOCSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-ASCORBATE-6-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14905"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ascb__L_e" sboTerm="SBO:0000247" id="M_ascb__L_e" name="L-Ascorbate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ascb__L_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C20364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:38290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43473"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CIWBSHSKHKDKBQ-JLAZNSOCSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB29945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASCORBATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00059"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_asn__L_c" sboTerm="SBO:0000247" id="M_asn__L_c" name="L-Asparagine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14871,38 +15837,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_bhb_e" sboTerm="SBO:0000247" id="M_bhb_e" name="(R)-3-Hydroxybutanoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H7O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C4H7O3</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_bhb_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5696461"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-73911"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10983"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18666"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00011"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050243"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-335"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM663"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WHBMMWSBFZVSSR-GSVOUGTGSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00797"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_bhb_p" sboTerm="SBO:0000247" id="M_bhb_p" name="(R)-3-Hydroxybutanoate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H7O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -16037,6 +16971,25 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cell4_e" sboTerm="SBO:0000247" id="M_cell4_e" name="Cellulose (n=4 repeating units)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C24H42O21">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C24H42O21</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cell4_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147063"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cell4_p" sboTerm="SBO:0000247" id="M_cell4_p" name="Cellulose (n=4 repeating units)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C24H42O21">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -16445,38 +17398,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_chor_e" sboTerm="SBO:0000247" id="M_chor_e" name="Chorismate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H8O6">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C10H8O6</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_chor_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-964856"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00251"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17333"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23227"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3677"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12199"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHORISMATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM337"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WTFXTQVDAKGDEY-HTQZYQBOSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00216"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_cinmcoa_c" sboTerm="SBO:0000247" id="M_cinmcoa_c" name="Cinnamoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30H38N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17253,48 +18174,47 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_cmp_c" sboTerm="SBO:0000247" id="M_cmp_c" name="CMP C9H12N3O8P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
+      <species metaid="M_cmcbtt_e" sboTerm="SBO:0000247" id="M_cmcbtt_e" name="Carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H48N5O13">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C9H12N3O8P</p>
-            <p>CHARGE: -2</p>
+            <p>FORMULA: C33H48N5O13</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_cmp_c">
+            <rdf:Description rdf:about="#M_cmcbtt_e">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109395"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1524067"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-727810"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17361"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23520"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3275"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41312"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41666"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41691"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58120"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00095"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IERHLVCPSMICTF-XVFCMESISA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CMP"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM31"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15940"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_cmp_e" sboTerm="SBO:0000247" id="M_cmp_e" name="CMP C9H12N3O8P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
+      <species metaid="M_cmcbtt_p" sboTerm="SBO:0000247" id="M_cmcbtt_p" name="Carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33H48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cmcbtt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15940"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cmp_c" sboTerm="SBO:0000247" id="M_cmp_c" name="CMP C9H12N3O8P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C9H12N3O8P</p>
@@ -17304,7 +18224,48 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_cmp_e">
+            <rdf:Description rdf:about="#M_cmp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1524067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-727810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41312"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58120"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00095"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IERHLVCPSMICTF-XVFCMESISA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CMP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM31"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00046"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cmp_e" sboTerm="SBO:0000247" id="M_cmp_e" name="CMP C9H12N3O8P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H12N3O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cmp_e">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109395"/>
@@ -17539,6 +18500,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_co_e" sboTerm="SBO:0000247" id="M_co_e" name="Carbon monoxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_co_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBON-MONOXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM10881"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UGFAIRIUMAVXCW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00204"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_co_p" sboTerm="SBO:0000247" id="M_co_p" name="Carbon monoxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_co_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBON-MONOXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM10881"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UGFAIRIUMAVXCW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00204"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_coa_c" sboTerm="SBO:0000247" id="M_coa_c" name="Coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C21H32N7O16P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18219,6 +19248,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ctncoa_c" sboTerm="SBO:0000247" id="M_ctncoa_c" name="Crotonyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H40N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H40N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ctncoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_ctp_c" sboTerm="SBO:0000247" id="M_ctp_c" name="CTP C9H12N3O14P3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O14P3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18350,6 +19396,114 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cyan_c" sboTerm="SBO:0000247" id="M_cyan_c" name="Hydrogen cyanide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CHN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHN</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyan_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LELOWRISYMNNSU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cyan_e" sboTerm="SBO:0000247" id="M_cyan_e" name="Hydrogen cyanide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CHN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHN</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyan_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LELOWRISYMNNSU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cyan_p" sboTerm="SBO:0000247" id="M_cyan_p" name="Hydrogen cyanide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CHN">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHN</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyan_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01326"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LELOWRISYMNNSU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-13584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cynt_c" sboTerm="SBO:0000247" id="M_cynt_c" name="Cyanate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNO">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18705,6 +19859,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cytd_e" sboTerm="SBO:0000247" id="M_cytd_e" name="Cytidine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H13N3O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cytd_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CYTIDINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM338"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UHDGCWIWMRVCDJ-XVFCMESISA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00367"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cytd_p" sboTerm="SBO:0000247" id="M_cytd_p" name="Cytidine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18809,6 +19997,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dad_5_c" sboTerm="SBO:0000247" id="M_dad_5_c" name="5&apos;-Deoxyadenosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H13N5O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dad_5_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1130791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-947703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CH33ADO"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM316"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/XGYIMTFOTBMPFP-KQYNXXCUSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03091"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dadp_c" sboTerm="SBO:0000247" id="M_dadp_c" name="DADP C10H12N5O9P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O9P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20074,6 +21294,60 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhptd_c" sboTerm="SBO:0000247" id="M_dhptd_c" name="4,5-dihydroxy-2,3-pentanedione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H8O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhptd_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYPENTANEDIONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2449"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UYTRITJAZOPLCZ-BYPYZUCNSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08638"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dhpyr_c" sboTerm="SBO:0000247" id="M_dhpyr_c" name="2,5-Dihydroxypyridine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H5NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H5NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhpyr_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:937"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CHGPEDOMXOLANF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-5-DIHYDROXYPYRIDINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00778"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_diact_c" sboTerm="SBO:0000247" id="M_diact_c" name="Diacetyl C4H6O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H6O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20173,6 +21447,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ditp_c" sboTerm="SBO:0000247" id="M_ditp_c" name="DITP(4-)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O13P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O13P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ditp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DITP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1325"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UFJPAQSLHAGEBL-RRKCRQDMSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dkmpp_c" sboTerm="SBO:0000247" id="M_dkmpp_c" name="2,3-diketo-5-methylthio-1-phosphopentane" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H9O6PS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21877,6 +23180,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fcmcbtt_e" sboTerm="SBO:0000247" id="M_fcmcbtt_e" name="Iron(III) chelated carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33FeH48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33FeH48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fcmcbtt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM11903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15952"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fcmcbtt_p" sboTerm="SBO:0000247" id="M_fcmcbtt_p" name="Iron(III) chelated carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33FeH48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33FeH48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fcmcbtt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM11903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15952"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_fdp_c" sboTerm="SBO:0000247" id="M_fdp_c" name="D-Fructose 1,6-bisphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H10O12P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22250,6 +23593,80 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fe3dhbzs3_c" sboTerm="SBO:0000247" id="M_fe3dhbzs3_c" name="2-3-dihydroxybenzoylserine trimer-Fe-III" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30FeH29N3O16">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C30FeH29N3O16</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fe3dhbzs3_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146250"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fe3dhbzs3_e" sboTerm="SBO:0000247" id="M_fe3dhbzs3_e" name="2-3-dihydroxybenzoylserine trimer-Fe-III" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30FeH28N3O16">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C30FeH28N3O16</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fe3dhbzs3_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146250"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fe3dhbzs3_p" sboTerm="SBO:0000247" id="M_fe3dhbzs3_p" name="2-3-dihydroxybenzoylserine trimer-Fe-III" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30FeH28N3O16">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C30FeH28N3O16</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fe3dhbzs3_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146250"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fe3pyovd_kt_e" sboTerm="SBO:0000247" id="M_fe3pyovd_kt_e" name="Ferrypyoverdine  P putida KT2440 specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27FeH48N10O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27FeH48N10O15</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_fe3pyovd_kt_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_feenter_c" sboTerm="SBO:0000247" id="M_feenter_c" name="Fe-enterobactin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30FeH26N3O15">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22334,6 +23751,147 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_feoxam_c" sboTerm="SBO:0000247" id="M_feoxam_c" name="Generic ferrioxamine-Fe-III" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C25H45FeN6O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H45FeN6O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_feoxam_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA08020175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162837"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SRMBQCVUAVULDJ-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04761"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_feoxam_e" sboTerm="SBO:0000247" id="M_feoxam_e" name="Generic ferrioxamine-Fe-III" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C25H45FeN6O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H45FeN6O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_feoxam_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA08020175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162837"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SRMBQCVUAVULDJ-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04761"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_feoxam_p" sboTerm="SBO:0000247" id="M_feoxam_p" name="Generic ferrioxamine-Fe-III" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C25H45FeN6O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H45FeN6O8</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_feoxam_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C07597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA08020175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162837"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SRMBQCVUAVULDJ-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04761"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_feoxam_un_c" sboTerm="SBO:0000247" id="M_feoxam_un_c" name="Ferroxamine minus Fe(3)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H45N6O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H45N6O8</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_feoxam_un_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15463"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_feoxam_un_e" sboTerm="SBO:0000247" id="M_feoxam_un_e" name="Ferroxamine minus Fe(3)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H45N6O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H45N6O8</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_feoxam_un_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15463"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_feoxam_un_p" sboTerm="SBO:0000247" id="M_feoxam_un_p" name="Ferroxamine minus Fe(3)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H45N6O8">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H45N6O8</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_feoxam_un_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15463"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_fer_c" sboTerm="SBO:0000247" id="M_fer_c" name="Ferulate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C10H9O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22548,6 +24106,52 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fldox_c" sboTerm="SBO:0000247" id="M_fldox_c" name="Flavodoxin (oxidized) - obsolete" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fldox_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Oxidized-flavodoxins"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd12207"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fldrd_c" sboTerm="SBO:0000247" id="M_fldrd_c" name="Flavodoxin (reduced) - obsolete" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fldrd_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Reduced-flavodoxins"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd12173"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_fmnRD_c" sboTerm="SBO:0000247" id="M_fmnRD_c" name="Flavin mononucleotide reduced C17H21N4O9P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C17H23N4O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23774,6 +25378,102 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_g3pi_c" sboTerm="SBO:0000247" id="M_g3pi_c" name="Sn-Glycero-3-phospho-1-inositol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H18O11P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H18O11P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pi_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6813734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BMVUIWJCUQSHLZ-UJGXJMNGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00902"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3pi_e" sboTerm="SBO:0000247" id="M_g3pi_e" name="Sn-Glycero-3-phospho-1-inositol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H18O11P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H18O11P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pi_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6813734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BMVUIWJCUQSHLZ-UJGXJMNGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00902"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g3pi_p" sboTerm="SBO:0000247" id="M_g3pi_p" name="Sn-Glycero-3-phospho-1-inositol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H18O11P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H18O11P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g3pi_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6813734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BMVUIWJCUQSHLZ-UJGXJMNGSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00902"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_g3ps_e" sboTerm="SBO:0000247" id="M_g3ps_e" name="Glycerophosphoserine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H13NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -23865,47 +25565,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_gal1p_c" sboTerm="SBO:0000247" id="M_gal1p_c" name="Alpha-D-Galactose 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C6H11O9P</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_gal1p_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00446"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03384"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10232"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12305"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17973"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20957"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37480"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4140"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59011"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00645"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62705"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXXFSFRBOHSIMQ-FPRJBGLDSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTOSE-1P"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19025"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_gal_c" sboTerm="SBO:0000247" id="M_gal_c" name="D-Galactose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24055,6 +25714,125 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_galctn__D_c" sboTerm="SBO:0000247" id="M_galctn__D_c" name="D-Galactonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H11O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_galctn__D_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00565"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-GALACTONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHNJXZEOKUKBD-MGCNEYSASA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00653"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_galctn__D_e" sboTerm="SBO:0000247" id="M_galctn__D_e" name="D-Galactonate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H11O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O7</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_galctn__D_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00565"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-GALACTONATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1734"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHNJXZEOKUKBD-MGCNEYSASA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00653"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_galt1p_c" sboTerm="SBO:0000247" id="M_galt1p_c" name="Galactitol 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_galt1p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28663"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60083"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GACTWZZMVMUKNG-DPYQTVNSSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTITOL-1-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_galt_e" sboTerm="SBO:0000247" id="M_galt_e" name="Galactitol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H14O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_galt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24139"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53575"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FBPFZTCFMRRESA-GUCUJZIJSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTITOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01171"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_galur_c" sboTerm="SBO:0000247" id="M_galur_c" name="D-Galacturonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -25931,6 +27709,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_glyald_p" sboTerm="SBO:0000247" id="M_glyald_p" name="D-Glyceraldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_glyald_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLYCERALD"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MNQZXJOMYWMBOU-VKHMYHEASA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00448"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_glyb_c" sboTerm="SBO:0000247" id="M_glyb_c" name="Glycine betaine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28056,6 +29864,48 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_h2s_e" sboTerm="SBO:0000247" id="M_h2s_e" name="Hydrogen sulfide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H2S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H2S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_h2s_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1614532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1655881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1663154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45489"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-7046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HS"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89582"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RWSOTUBLDIXVET-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd24697"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_h_c" sboTerm="SBO:0000247" id="M_h_c" name="H+" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28837,6 +30687,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hg2_e" sboTerm="SBO:0000247" id="M_hg2_e" name="Mercury  charged 2  Hg" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hg2_p" sboTerm="SBO:0000247" id="M_hg2_p" name="Mercury  charged 2  Hg" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -28901,6 +30782,43 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hicit_c" sboTerm="SBO:0000247" id="M_hicit_c" name="Homoisocitrate C7H7O7" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H10O7">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H10O7</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hicit_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24618"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:36456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HOMO-I-CIT"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM984"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OEJZZCGRGVFWHK-WVZVXSGGSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03372"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_his__L_c" sboTerm="SBO:0000247" id="M_his__L_c" name="L-Histidine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29306,6 +31224,29 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hmpscoa_c" sboTerm="SBO:0000247" id="M_hmpscoa_c" name="(Hydroxymethylphenyl)succinyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C32H41N7O20P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C32H41N7O20P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hmpscoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C09819"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DVSQFPLMOLPRDU-BFUQQYMQSA-I"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd06711"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hom__L_c" sboTerm="SBO:0000247" id="M_hom__L_c" name="L-Homoserine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32333,6 +34274,24 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_m2bcoa_c" sboTerm="SBO:0000247" id="M_m2bcoa_c" name="2-methylbutanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H44N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H44N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_m2bcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_m_xyl_c" sboTerm="SBO:0000247" id="M_m_xyl_c" name="M-Xylene" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H10">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32655,6 +34614,71 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_male_c" sboTerm="SBO:0000247" id="M_male_c" name="Maleate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H2O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H2O4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_male_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:132951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1239"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VZCYOOQTPOCHFL-UPHRSURJSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00996"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_malm_c" sboTerm="SBO:0000247" id="M_malm_c" name="Maleamate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6652"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FSQQTNAZHBEJLS-UPHRSURJSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEAMATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01123"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_malt1p_c" sboTerm="SBO:0000247" id="M_malt1p_c" name="Alpha-maltose 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H21O14P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32672,6 +34696,40 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_malt6p_c" sboTerm="SBO:0000247" id="M_malt6p_c" name="Maltose 6&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H21O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H21O14P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malt6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:111006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14569"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:91177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10519"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ITPHOIFCAFNCLL-ASMJPISFSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-15982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01919"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_malt_c" sboTerm="SBO:0000247" id="M_malt_c" name="Maltose C12H22O11" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32752,6 +34810,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_malt_p" sboTerm="SBO:0000247" id="M_malt_p" name="Maltose C12H22O11" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-868706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22463"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00275"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GUBGYTABKSRVRQ-PICCSMPSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALPHA-MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00665"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_malthp_c" sboTerm="SBO:0000247" id="M_malthp_c" name="Maltoheptaose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C42H72O36">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -32952,68 +35050,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_malttr_e" sboTerm="SBO:0000247" id="M_malttr_e" name="Maltotriose C18H32O16" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C18H32O16">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C18H32O16</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_malttr_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-191103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25146"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27931"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6672"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FYGDTMLNYKFZSV-PXXRMHSHSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOTRIOSE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM468"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01262"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_malttr_p" sboTerm="SBO:0000247" id="M_malttr_p" name="Maltotriose C18H32O16" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C18H32O16">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C18H32O16</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_malttr_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-191103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25146"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27931"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61993"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6672"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FYGDTMLNYKFZSV-PXXRMHSHSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOTRIOSE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM468"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01262"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_malttre_c" sboTerm="SBO:0000247" id="M_malttre_c" name="Maltosyltrehalose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C24H42O21">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33174,6 +35210,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_man_p" sboTerm="SBO:0000247" id="M_man_p" name="D-Mannose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_man_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-429579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6799594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-964752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-mannopyranose"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM182"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WQZGKKKJIJFFOK-QTVWNMPRSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27437"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mana_c" sboTerm="SBO:0000247" id="M_mana_c" name="D-Mannonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H11O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33240,6 +35312,30 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_mdhdhf_c" sboTerm="SBO:0000247" id="M_mdhdhf_c" name="(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H8O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mdhdhf_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CCVJVKWZZMMBHB-WVZVXSGGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-10773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM9407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd22811"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_melib_c" sboTerm="SBO:0000247" id="M_melib_c" name="Melibiose C12H22O11" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33324,6 +35420,78 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_meoh_e" sboTerm="SBO:0000247" id="M_meoh_e" name="Methanol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH4O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CH4O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_meoh_e">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:52090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALCOHOL-GROUP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:METOH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM157"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OKKJLVBELUTLKV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00116"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_meoh_p" sboTerm="SBO:0000247" id="M_meoh_p" name="Methanol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH4O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CH4O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_meoh_p">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:52090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALCOHOL-GROUP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:METOH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM157"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OKKJLVBELUTLKV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00116"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mercppyr_c" sboTerm="SBO:0000247" id="M_mercppyr_c" name="Mercaptopyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H3O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33599,71 +35767,56 @@
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       </species>
-      <species metaid="M_metsox_R__L_c" sboTerm="SBO:0000247" id="M_metsox_R__L_c" name="L-methionine-R-sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox__R_c" sboTerm="SBO:0000247" id="M_metox__R_c" name="L methionine R oxide C5H11NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_metsox_R__L_c">
+            <rdf:Description rdf:about="#M_metox__R_c">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11576"/>
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               </bqbiol:is>
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         </annotation>
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-      <species metaid="M_metsox_R__L_e" sboTerm="SBO:0000247" id="M_metsox_R__L_e" name="L-methionine-R-sulfoxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox__R_e" sboTerm="SBO:0000247" id="M_metox__R_e" name="L methionine R oxide C5H11NO3S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_R__L_e">
+            <rdf:Description rdf:about="#M_metox__R_e">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11576"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_S__L_c" sboTerm="SBO:0000247" id="M_metsox_S__L_c" name="L-Methionine Sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox_c" sboTerm="SBO:0000247" id="M_metox_c" name="L Methionine S oxide C5H11NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_metsox_S__L_c">
+            <rdf:Description rdf:about="#M_metox_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
@@ -33684,7 +35837,64 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_S__L_e" sboTerm="SBO:0000247" id="M_metsox_S__L_e" name="L-Methionine Sulfoxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox_e" sboTerm="SBO:0000247" id="M_metox_e" name="L Methionine S oxide C5H11NO3S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_metox_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-Methionine-sulfoxides"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2246"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-YGVKFDHGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd29319"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_metsox_R__L_c" sboTerm="SBO:0000247" id="M_metsox_R__L_c" name="L-methionine-R-sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_metsox_R__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_metsox_S__L_c" sboTerm="SBO:0000247" id="M_metsox_S__L_c" name="L-Methionine Sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
@@ -33694,7 +35904,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_S__L_e">
+            <rdf:Description rdf:about="#M_metsox_S__L_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
@@ -34232,6 +36442,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mql6_c" sboTerm="SBO:0000247" id="M_mql6_c" name="Menaquinol 6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C41H58O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C41H58O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mql6_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:84536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7517"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZVENTDGZQVBWNA-RCIYGOBDSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15994"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mql7_c" sboTerm="SBO:0000247" id="M_mql7_c" name="Menaquinol 7 C46H66O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C46H66O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34280,6 +36514,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mqn6_c" sboTerm="SBO:0000247" id="M_mqn6_c" name="Menaquinone 6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C41H56O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C41H56O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mqn6_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB30017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMPR02030001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-9724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM12235"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PFRQBZFETXBLTP-RCIYGOBDSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15995"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mqn7_c" sboTerm="SBO:0000247" id="M_mqn7_c" name="Menaquinone 7 C46H64O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C46H64O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34497,6 +36755,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mththf_e" sboTerm="SBO:0000247" id="M_mththf_e" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mththf_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVIYGXUQVXBHQS-IUYQGCFVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C21382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-10774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM30887"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mththf_p" sboTerm="SBO:0000247" id="M_mththf_p" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34904,6 +37186,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_n2o_e" sboTerm="SBO:0000247" id="M_n2o_e" name="Nitrous oxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="N2O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: N2O</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_n2o_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00102"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GQPLMRYTRLFLPF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB35807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITROUS-OXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00659"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_n2o_p" sboTerm="SBO:0000247" id="M_n2o_p" name="Nitrous oxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="N2O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: N2O</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_n2o_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00102"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GQPLMRYTRLFLPF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB35807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITROUS-OXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00659"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_n5horn_c" sboTerm="SBO:0000247" id="M_n5horn_c" name="N5 hydroxyL ornithine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H12N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34921,6 +37265,37 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_n6all26d_c" sboTerm="SBO:0000247" id="M_n6all26d_c" name="N6-Acetyl-LL-2,6-diaminoheptanedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H15N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H15N2O5</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_n6all26d_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7410"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KYVLWJXMCBZDRL-BQBZGAKWSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02685"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_na1_c" sboTerm="SBO:0000247" id="M_na1_c" name="Sodium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Na">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35369,6 +37744,36 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_nal2a6o_c" sboTerm="SBO:0000247" id="M_nal2a6o_c" name="N-Acetyl-L-2-amino-6-oxopimelate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H11NO6</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nal2a6o_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-ACETYL-L-2-AMINO-6-OXO-PIMELATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1872"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RVHKMLVNOXVQRH-LURJTMIESA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03289"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ncam_c" sboTerm="SBO:0000247" id="M_ncam_c" name="Nicotinamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H6N2O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35402,6 +37807,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nfmalm_c" sboTerm="SBO:0000247" id="M_nfmalm_c" name="N-Formyl maleamic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H4NO4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H4NO4</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nfmalm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C18232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59930"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HSKSAKBZUITULZ-UPHRSURJSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA08020194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16741"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_nh3_c" sboTerm="SBO:0000247" id="M_nh3_c" name="Ammonia" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H3N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35629,6 +38061,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nh4oh_c" sboTerm="SBO:0000247" id="M_nh4oh_c" name="Ammonium hydroxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="H5NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H5NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nh4oh_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D04594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NH4OH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146119"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VHUUQVKOLVNVRT-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00985"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ni2_c" sboTerm="SBO:0000247" id="M_ni2_c" name="Nickel" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Ni">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35789,6 +38251,88 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nmn_e" sboTerm="SBO:0000247" id="M_nmn_e" name="NMN C11H14N2O8P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H14N2O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H14N2O8P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nmn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8940067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14648"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7557"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DAYLJWODMCOQEW-TURQNECASA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NICOTINAMIDE_NUCLEOTIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00355"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_nmn_p" sboTerm="SBO:0000247" id="M_nmn_p" name="NMN C11H14N2O8P" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C11H14N2O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H14N2O8P</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nmn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8940067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14648"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7557"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DAYLJWODMCOQEW-TURQNECASA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NICOTINAMIDE_NUCLEOTIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00355"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_no2_c" sboTerm="SBO:0000247" id="M_no2_c" name="Nitrite" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36047,6 +38591,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_no_p" sboTerm="SBO:0000247" id="M_no_p" name="Nitric oxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_no_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITRIC-OXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM228"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MWUXSHHQAYIFBG-UHFFFAOYSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_nona2coa_c" sboTerm="SBO:0000247" id="M_nona2coa_c" name="Nona 2 enoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30H44N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36280,6 +38854,55 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_o2_e" sboTerm="SBO:0000247" id="M_o2_e" name="O2 O2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_o2_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1131511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1236709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-352327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5668566"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:OXYGEN-MOLECULE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYMOFIZGZYHOMD-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00007"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_o2_p" sboTerm="SBO:0000247" id="M_o2_p" name="O2 O2" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -39026,6 +41649,140 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_peamn_c" sboTerm="SBO:0000247" id="M_peamn_c" name="Phenethylamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_peamn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-500605"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BHHGXPLMPWCGHP-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:225237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:50048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PHENYLETHYLAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03161"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_peamn_e" sboTerm="SBO:0000247" id="M_peamn_e" name="Phenethylamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_peamn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-500605"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BHHGXPLMPWCGHP-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:225237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:50048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PHENYLETHYLAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03161"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_peamn_p" sboTerm="SBO:0000247" id="M_peamn_p" name="Phenethylamine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_peamn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-500605"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BHHGXPLMPWCGHP-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:225237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:50048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PHENYLETHYLAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03161"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_peng_p" sboTerm="SBO:0000247" id="M_peng_p" name="Penicillin G C16H18N2O4S" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C16H17N2O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H17N2O4S</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_peng_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB15186"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/JGSARLDLIJGVTE-MBNYWOFBSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PENICILLIN-G"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03292"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pentso3_c" sboTerm="SBO:0000247" id="M_pentso3_c" name="Pentanesulfonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H11O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42663,25 +45420,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_ptd1ino160_c" sboTerm="SBO:0000247" id="M_ptd1ino160_c" name="Phosphatidyl 1D myo inositol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C41H78O13P">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C41H78O13P</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_ptd1ino160_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM12646"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_ptrc_c" sboTerm="SBO:0000247" id="M_ptrc_c" name="Putrescine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C4H14N2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43299,36 +46037,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_quin_e" sboTerm="SBO:0000247" id="M_quin_e" name="Quinate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H11O6">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H11O6</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_quin_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AAWZDTNXLSGCEK-WYWMIBKRSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00296"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17521"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26492"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29751"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:QUINATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00248"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_quin_p" sboTerm="SBO:0000247" id="M_quin_p" name="Quinate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H11O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43783,6 +46491,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ru5p__L_c" sboTerm="SBO:0000247" id="M_ru5p__L_c" name="L-Ribulose 5-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ru5p__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6296"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FNZLKVNUWIIPSJ-CRCLSJGQSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-RIBULOSE-5-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_s7p_c" sboTerm="SBO:0000247" id="M_s7p_c" name="Sedoheptulose 7-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43817,6 +46554,110 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_salc_c" sboTerm="SBO:0000247" id="M_salc_c" name="Salicylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM378"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YGSDEFSMJLZEOE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00599"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salc_e" sboTerm="SBO:0000247" id="M_salc_e" name="Salicylate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM378"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YGSDEFSMJLZEOE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00599"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs1_c" sboTerm="SBO:0000247" id="M_salchs1_c" name="Salmochelin-S1" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H29N2O16">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H29N2O16</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs1_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM148507"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs2_c" sboTerm="SBO:0000247" id="M_salchs2_c" name="Salmochelin-S2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H47N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42H47N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146229"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs2_e" sboTerm="SBO:0000247" id="M_salchs2_e" name="Salmochelin-S2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H48N3O26">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43855,6 +46696,63 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_salchs2fe_c" sboTerm="SBO:0000247" id="M_salchs2fe_c" name="Salmochelin-S2-Fe-III" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH48N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH48N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2fe_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs2fe_e" sboTerm="SBO:0000247" id="M_salchs2fe_e" name="Salmochelin-S2-Fe-III" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH48N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH48N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2fe_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchs2fe_p" sboTerm="SBO:0000247" id="M_salchs2fe_p" name="Salmochelin-S2-Fe-III" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42FeH48N3O26">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C42FeH48N3O26</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchs2fe_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs4_c" sboTerm="SBO:0000247" id="M_salchs4_c" name="Salmochelin-S4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H46N3O25">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43950,6 +46848,63 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_salchsx_c" sboTerm="SBO:0000247" id="M_salchsx_c" name="Salmochelin-SX" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H20NO11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H20NO11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchsx_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146623"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchsx_e" sboTerm="SBO:0000247" id="M_salchsx_e" name="Salmochelin-SX" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H20NO11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H20NO11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchsx_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146623"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salchsx_p" sboTerm="SBO:0000247" id="M_salchsx_p" name="Salmochelin-SX" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H20NO11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H20NO11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salchsx_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM146623"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_sarcs_c" sboTerm="SBO:0000247" id="M_sarcs_c" name="Sarcosine C3H7NO2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H7NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43990,6 +46945,80 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_sbt6p_c" sboTerm="SBO:0000247" id="M_sbt6p_c" name="D-Sorbitol 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H13O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13O9P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sbt6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9202"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GACTWZZMVMUKNG-SLPGGIOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-SORBITOL-6-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00804"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_sbt__D_e" sboTerm="SBO:0000247" id="M_sbt__D_e" name="D-Sorbitol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H14O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sbt__D_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5652213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00096"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FBPFZTCFMRRESA-JGWLITMVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SORBITOL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00588"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_sbzcoa_c" sboTerm="SBO:0000247" id="M_sbzcoa_c" name="O-Succinylbenzoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C32H39N7O20P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45195,6 +48224,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_stfrnA_c" sboTerm="SBO:0000247" id="M_stfrnA_c" name="Staphyloferrin A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C17H24N2O14">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C17H24N2O14</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_stfrnA_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_stfrnA_e" sboTerm="SBO:0000247" id="M_stfrnA_e" name="Staphyloferrin A" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C17H24N2O14">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C17H24N2O14</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_stfrnA_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_suc6p_c" sboTerm="SBO:0000247" id="M_suc6p_c" name="Sucrose 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H21O14P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45576,6 +48639,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_sucr_p" sboTerm="SBO:0000247" id="M_sucr_p" name="Sucrose C12H22O11" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H22O11</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_sucr_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-188980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9314"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CZMRCDWAGMRECN-UGDNZRGBSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G00370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SUCROSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00076"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_sucsal_c" sboTerm="SBO:0000247" id="M_sucsal_c" name="Succinic semialdehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45749,6 +48845,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_tag6p__D_c" sboTerm="SBO:0000247" id="M_tag6p__D_c" name="D-Tagatose 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H11O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O9P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -3.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tag6p__D_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BGWGXPAPYGQALX-OEXCPVAWSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TAGATOSE-6-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00805"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_taur_c" sboTerm="SBO:0000247" id="M_taur_c" name="Taurine C2H7NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C2H7NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45857,6 +48983,108 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_tcynt_c" sboTerm="SBO:0000247" id="M_tcynt_c" name="Thiocyanate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CNS</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tcynt_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HSCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZMZDMBWJUHKJPS-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_tcynt_e" sboTerm="SBO:0000247" id="M_tcynt_e" name="Thiocyanate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CNS</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tcynt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HSCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZMZDMBWJUHKJPS-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_tcynt_p" sboTerm="SBO:0000247" id="M_tcynt_p" name="Thiocyanate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CNS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CNS</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tcynt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26954"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HSCN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZMZDMBWJUHKJPS-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_td2coa_c" sboTerm="SBO:0000247" id="M_td2coa_c" name="Trans-Tetradec-2-enoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H56N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46122,78 +49350,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_thm_c" sboTerm="SBO:0000247" id="M_thm_c" name="Thiamin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C12H17N4OS">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C12H17N4OS</p>
-            <p>CHARGE: 1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thm_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D08580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM161565"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYVIATVLJGTBFV-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00305"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_thm_e" sboTerm="SBO:0000247" id="M_thm_e" name="Thiamin" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C12H17N4OS">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C12H17N4OS</p>
-            <p>CHARGE: 1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thm_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D08580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM161565"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYVIATVLJGTBFV-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00305"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_thm_p" sboTerm="SBO:0000247" id="M_thm_p" name="Thiamin" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C12H17N4OS">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C12H17N4OS</p>
-            <p>CHARGE: 1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_thm_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D08580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM161565"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYVIATVLJGTBFV-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00305"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_thmmp_c" sboTerm="SBO:0000247" id="M_thmmp_c" name="Thiamin monophosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C12H16N4O4PS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -46989,6 +50145,72 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_tre6p_c" sboTerm="SBO:0000247" id="M_tre6p_c" name="Alpha,alpha&apos;-Trehalose 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H21O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H21O14P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tre6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-868701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G09795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01124"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LABSPYBHMPDTEL-LIZSDCNHSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TREHALOSE-6P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_tre6p_e" sboTerm="SBO:0000247" id="M_tre6p_e" name="Alpha,alpha&apos;-Trehalose 6-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C12H21O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C12H21O14P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tre6p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-868701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G09795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01124"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LABSPYBHMPDTEL-LIZSDCNHSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TREHALOSE-6P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_tre_c" sboTerm="SBO:0000247" id="M_tre_c" name="Trehalose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48220,6 +51442,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_udpacgal_c" sboTerm="SBO:0000247" id="M_udpacgal_c" name="UDP-N-acetyl-D-galactosamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C17H25N3O17P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C17H25N3O17P2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_udpacgal_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-735700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16650"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10611"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LFTYTUAZOPRMMI-LDDHHVEYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UDP-N-ACETYL-GALACTOSAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162233"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00175"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_udpg_c" sboTerm="SBO:0000247" id="M_udpg_c" name="UDPglucose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49094,6 +52348,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_vaccoa_c" sboTerm="SBO:0000247" id="M_vaccoa_c" name="Vinylacetyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H36N7O17P3S</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_vaccoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2159"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UATIGEHITDTAGF-CITAKDKDSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01557"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_val__D_c" sboTerm="SBO:0000247" id="M_val__D_c" name="D Valine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49507,6 +52791,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xan_e" sboTerm="SBO:0000247" id="M_xan_e" name="Xanthine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H4N4O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H4N4O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xan_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17712"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:48517"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LRFVTYWOQMYALW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XANTHINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00309"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xan_p" sboTerm="SBO:0000247" id="M_xan_p" name="Xanthine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H4N4O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49572,6 +52888,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xtp_c" sboTerm="SBO:0000247" id="M_xtp_c" name="XTP" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O15P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O15P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00700"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CAEFEWVYEZABLA-UUOKFMHZSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XTP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00530"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xtsn_c" sboTerm="SBO:0000247" id="M_xtsn_c" name="Xanthosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49663,6 +53008,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xu5p__L_c" sboTerm="SBO:0000247" id="M_xu5p__L_c" name="L-Xylulose 5-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xu5p__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6328"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FNZLKVNUWIIPSJ-WHFBIAKZSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-XYLULOSE-5-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xyl__D_c" sboTerm="SBO:0000247" id="M_xyl__D_c" name="D-Xylose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49899,55 +53273,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_o2_e" sboTerm="SBO:0000247" id="M_o2_e" name="O2 O2" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="O2">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: O2</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_o2_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1131511"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113533"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113534"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1236709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189461"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-352327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5668566"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00007"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10745"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15379"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25366"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26689"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27140"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30491"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44742"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00003"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:OXYGEN-MOLECULE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM4"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MYMOFIZGZYHOMD-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00007"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
     </listOfSpecies>
     <listOfParameters>
       <parameter id="cobra_default_lb" value="-1000" constant="true"/>
@@ -50212,6 +53537,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_1P2CBXLR" sboTerm="SBO:0000176" id="R_1P2CBXLR" name="Delta1 piperideine 2 carboxylate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -50399,6 +53727,52 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3092"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_25DKGLCNt2rpp" sboTerm="SBO:0000185" id="R_25DKGLCNt2rpp" name="2 5 diketo D gluconate transport via proton symport  reversible  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_25DKGLCNt2rpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_25dkglcn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_25dkglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_25DKGLCNtex" sboTerm="SBO:0000185" id="R_25DKGLCNtex" name="2 5 diketo D gluconate transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_25DKGLCNtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_25dkglcn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_25dkglcn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2AACLPGT160" sboTerm="SBO:0000176" id="R_2AACLPGT160" name="2 acyl acyl carrier protein glycerophospho glycerol acyltransferase  n C160 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -50879,6 +54253,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2537"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2AGPEAT181" sboTerm="SBO:0000176" id="R_2AGPEAT181" name="2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2AGPEAT181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94763"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2agpe181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocdcea_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pe181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2537"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_2AGPG160tipp" sboTerm="SBO:0000185" id="R_2AGPG160tipp" name="2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0) transporter via facilitated diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51111,6 +54516,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2537"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2DDARAA" sboTerm="SBO:0000176" id="R_2DDARAA" name="2-dehydro-3-deoxy-D-arabinonate Aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_2DDARAA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ddara_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4188"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_2DHGLCK" sboTerm="SBO:0000176" id="R_2DHGLCK" name="Dehydrogluconokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51267,6 +54698,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2625"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2PGLYCt6" sboTerm="SBO:0000185" id="R_2PGLYCt6" name="2 Phosphoglycolate transport inout via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2PGLYCt6">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05473"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_34DHPACDO" sboTerm="SBO:0000176" id="R_34DHPACDO" name="3 4 dihydroxyphenylacetate 2 3 dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51668,7 +55126,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3014"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_3MBt2pp" sboTerm="SBO:0000185" id="R_3MBt2pp" name="H+/Isovalerate symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_3MBt4pp" sboTerm="SBO:0000185" id="R_3MBt4pp" name="Na+/Isovalerate symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -51676,10 +55134,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_3MBt2pp">
+            <rdf:Description rdf:about="#R_3MBt4pp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94917"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -51687,11 +55145,11 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_3mb_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_3mb_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_3MBtex" sboTerm="SBO:0000185" id="R_3MBtex" name="3-methylbutanoic acid transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -52203,32 +55661,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3504"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_4ABZt" sboTerm="SBO:0000185" id="R_4ABZt" name="4 Aminobenzoate mitochondrial transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_4ABZt">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13206"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_4abz_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_4abz_e" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_4CMLCL_kt" sboTerm="SBO:0000176" id="R_4CMLCL_kt" name="4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52328,6 +55760,36 @@
           <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_4HBALDtex" sboTerm="SBO:0000185" id="R_4HBALDtex" name="4-hydroxybenzaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HBALDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95006"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hbald_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2900"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3692"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_4HBAt" sboTerm="SBO:0000185" id="R_4HBAt" name="MNXR68734" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52454,6 +55916,42 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4HGLSD" sboTerm="SBO:0000176" id="R_4HGLSD" name="4HGLSD" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HGLSD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.88"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14472"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05051"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hglusa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_e4hglu_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_4HOXPACMOF" sboTerm="SBO:0000176" id="R_4HOXPACMOF" name="4 hydroxyphenylacetate 3 monooxygenase FADH2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52592,15 +56090,15 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_4HPRODCabcpp" sboTerm="SBO:0000185" id="R_4HPRODCabcpp" name="Cis 4 Hydroxy D proline transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_4HPROE" sboTerm="SBO:0000176" id="R_4HPROE" name="4 hydroxyproline epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_4HPRODCabcpp">
+            <rdf:Description rdf:about="#R_4HPROE">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -52608,43 +56106,16 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_4hpro_DC_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_4hpro_DC_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA0220"/>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1268"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_4HPRODCtex" sboTerm="SBO:0000185" id="R_4HPRODCtex" name="Cis 4 hydroxy L proline transport  extracellular " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_4HPRODCtex">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_4hpro_DC_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_4hpro_DC_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_4HPROE" sboTerm="SBO:0000176" id="R_4HPROE" name="4 hydroxyproline epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_4HPTNCOAK" sboTerm="SBO:0000176" id="R_4HPTNCOAK" name="4 Hydroxypentanoyl CoA kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -52652,7 +56123,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_4HPROE">
+            <rdf:Description rdf:about="#R_4HPTNCOAK">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -52660,14 +56131,14 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4hpro_DC_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4poptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA1268"/>
-        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_4HTHRA" sboTerm="SBO:0000176" id="R_4HTHRA" name="4-hydroxy-L-threonine aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -52733,6 +56204,111 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3735"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4OXPTCOADHx" sboTerm="SBO:0000176" id="R_4OXPTCOADHx" name="4 Oxopentanoyl CoA 4 dehydrogenase (NAD)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTCOADHx">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4079"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4OXPTCOADHy" sboTerm="SBO:0000176" id="R_4OXPTCOADHy" name="4 Oxopentanoyl CoA 4 dehydrogenase (NADP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTCOADHy">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4079"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4OXPTNtex" sboTerm="SBO:0000185" id="R_4OXPTNtex" name="4 Oxopentanoate transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTNtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4OXPTNtpp" sboTerm="SBO:0000185" id="R_4OXPTNtpp" name="4 Oxopentanoate transport via Na symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTNtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4oxptn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA3235"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_4PCP" sboTerm="SBO:0000176" id="R_4PCP" name="Tetrapeptide L,D-carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52832,6 +56408,74 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4POPCOAM" sboTerm="SBO:0000176" id="R_4POPCOAM" name="4 (Phosphooxy pentanoyl CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4POPCOAM">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4poptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4POPCOAM2" sboTerm="SBO:0000176" id="R_4POPCOAM2" name="4 (Phosphooxy pentanoyl CoA mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4POPCOAM2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4POPCOAM3" sboTerm="SBO:0000176" id="R_4POPCOAM3" name="4 (Phosphooxy pentanoyl CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4POPCOAM3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_4hoxpactex" sboTerm="SBO:0000185" id="R_4hoxpactex" name="4 hydroxyphenylacetate transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53010,6 +56654,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4098"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_5DOAN" sboTerm="SBO:0000176" id="R_5DOAN" name="5&apos;-deoxyadenosine nuclosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_5DOAN">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13649"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5drib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_5HPUDICDC_c" sboTerm="SBO:0000176" id="R_5HPUDICDC_c" name="5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate decarboxylase, spontaneous" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53062,6 +56739,99 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1288"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_6HNACMO" sboTerm="SBO:0000176" id="R_6HNACMO" name="6 hydroxynicotinic acid monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_6HNACMO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.13.114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-7573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12746"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA3328"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_6HNACt1pp" sboTerm="SBO:0000185" id="R_6HNACt1pp" name="6 Hydroxy Nicotinic acid transport via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_6HNACt1pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4126"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_6HNACtex" sboTerm="SBO:0000185" id="R_6HNACtex" name="Nicotinic acid transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_6HNACtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2213"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_A5PISO" sboTerm="SBO:0000176" id="R_A5PISO" name="Arabinose-5-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53100,6 +56870,58 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_A6PAG" sboTerm="SBO:0000176" id="R_A6PAG" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_A6PAG">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gal_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dgal6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_AAAN" sboTerm="SBO:0000176" id="R_AAAN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AAAN">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AACOAT" sboTerm="SBO:0000176" id="R_AACOAT" name="Acetoacetyl-CoA:acetate CoA-transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53320,44 +57142,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1217"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AACTOOR" sboTerm="SBO:0000176" id="R_AACTOOR" name="Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_AACTOOR">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMACETOXID-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95149"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02529"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01833"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mthgxl_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_AADSACYCL" sboTerm="SBO:0000176" id="R_AADSACYCL" name="AAPSAS" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53392,6 +57176,9 @@
         <listOfProducts>
           <speciesReference species="M_L2aadp6sa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_AADa" sboTerm="SBO:0000176" id="R_AADa" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -53746,6 +57533,52 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1147"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ABUTtex" sboTerm="SBO:0000185" id="R_ABUTtex" name="4-aminobutyrate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ABUTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35036"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-888592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11326"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4abut_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ACACCT" sboTerm="SBO:0000176" id="R_ACACCT" name="Acetyl-CoA:acetoacetyl-CoA transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54522,7 +58355,7 @@
           <speciesReference species="M_acac_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_ACALDtex" sboTerm="SBO:0000185" id="R_ACALDtex" name="Acetaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACALDt" sboTerm="SBO:0000185" id="R_ACALDt" name="Acetaldehyde reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -54530,7 +58363,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACALDtex">
+            <rdf:Description rdf:about="#R_ACALDt">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
@@ -54548,8 +58381,43 @@
           <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ACALDtpp" sboTerm="SBO:0000185" id="R_ACALDtpp" name="Acetaldehyde reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
           <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ACCOAC" sboTerm="SBO:0000176" id="R_ACCOAC" name="Acetyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -55098,6 +58966,40 @@
           <speciesReference species="M_lac__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ACMANApts" sboTerm="SBO:0000185" id="R_ACMANApts" name="N-acetyl-D-mannosamine transport via PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACMANApts">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10183"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acmana_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acmanap_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACOAD1" sboTerm="SBO:0000176" id="R_ACOAD1" name="Acyl-CoA dehydrogenase (butanoyl-CoA)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58549,6 +62451,43 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ADAPAT" sboTerm="SBO:0000176" id="R_ADAPAT" name="E N-acetyl-L,L-diaminopimelate aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADAPAT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-4822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03086"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nal2a6o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n6all26d_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0530"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ADCL" sboTerm="SBO:0000176" id="R_ADCL" name="4-aminobenzoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58586,7 +62525,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2964"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ADCPS2" sboTerm="SBO:0000176" id="R_ADCPS2" name="Adenosylcobinamide-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ADCPS1" sboTerm="SBO:0000176" id="R_ADCPS1" name="Adenosylcobinamide-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -58594,18 +62533,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ADCPS2">
+            <rdf:Description rdf:about="#R_ADCPS1">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21897"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/21899"/>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.1.10"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-6261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06529"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6.3.1.10-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07302"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05054"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -58613,11 +62548,11 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_adcobhex_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_applp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
@@ -59249,6 +63184,40 @@
           <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ADOCBIK" sboTerm="SBO:0000176" id="R_ADOCBIK" name="Adenosyl cobinamide kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADOCBIK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:COBINAMIDEKIN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95465"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03536"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_adocbi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adocbip_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1278"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ADPRDP" sboTerm="SBO:0000176" id="R_ADPRDP" name="ADPribose diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60248,6 +64217,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3005"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AGMPTRCtpp" sboTerm="SBO:0000185" id="R_AGMPTRCtpp" name="Agmatine/putrescine antiporter (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGMPTRCtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95553"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_agm_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_agm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptrc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AGMt2pp" sboTerm="SBO:0000185" id="R_AGMt2pp" name="GlcNAc-anhMurNAc transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60623,7 +64618,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2104"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AI2abcpp" sboTerm="SBO:0000185" id="R_AI2abcpp" name="Autoinducer-2 ABC transporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_AI2tex" sboTerm="SBO:0000185" id="R_AI2tex" name="Ai2 transport, outer membrane" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -60631,7 +64626,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_AI2abcpp">
+            <rdf:Description rdf:about="#R_AI2tex">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -60639,15 +64634,10 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mththf_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mththf_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mththf_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mththf_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_AI2tpp" sboTerm="SBO:0000185" id="R_AI2tpp" name="Quorum signal AI-2 exporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -62583,35 +66573,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4899"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ALDD31" sboTerm="SBO:0000176" id="R_ALDD31" name="Aminoacetaldehyde oxidation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ALDD31">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05735"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ALDD31_1" sboTerm="SBO:0000176" id="R_ALDD31_1" name="Aldehyde dehydrogenase  aminoacetaldehyde  NAD " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -63921,6 +67882,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2163"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AMANAPEr" sboTerm="SBO:0000176" id="R_AMANAPEr" name="N-acetylmannosamine 6-phosphate epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMANAPEr">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NANE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01506"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acmanap_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgam6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AMID2" sboTerm="SBO:0000176" id="R_AMID2" name="Amidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64034,7 +68027,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3093"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AMMQT8_2" sboTerm="SBO:0000176" id="R_AMMQT8_2" name="S-adenosylmethione:2-demethylmenaquinone methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_AMMQLT8" sboTerm="SBO:0000176" id="R_AMMQLT8" name="S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -64042,56 +68035,71 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_AMMQT8_2">
+            <rdf:Description rdf:about="#R_AMMQLT8">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95823"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADOMET-DMK-METHYLTRANSFER-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08130"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dmmql8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_PA0547"/>
-            <fbc:geneProductRef fbc:geneProduct="G_PA3119"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA5459"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AMPAH" sboTerm="SBO:0000176" id="R_AMPAH" name="Aminopyrimidine aminohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_AMMQT8_2" sboTerm="SBO:0000176" id="R_AMMQT8_2" name="S-adenosylmethione:2-demethylmenaquinone methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_AMPAH">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AMMQT8_2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10094"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4ahmmp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_4mhetz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0547"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3119"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_AMPMS2" sboTerm="SBO:0000176" id="R_AMPMS2" name="4-amino-2-methyl-5-phosphomethylpyrimidine synthetase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -64649,6 +68657,31 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ANHGMtex" sboTerm="SBO:0000185" id="R_ANHGMtex" name="GlcNAc-anhMurNAc transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ANHGMtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08135"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_anhgm_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_anhgm_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ANHMK" sboTerm="SBO:0000176" id="R_ANHMK" name="1,6-anhydrous-N-Acetylmuramate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64840,6 +68873,9 @@
           <speciesReference species="M_1pipdn2c_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_AP4AH" sboTerm="SBO:0000176" id="R_AP4AH" name="Ap4A hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -65307,42 +69343,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0363"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_APPLDHr" sboTerm="SBO:0000176" id="R_APPLDHr" name="Aminopropanol dehydrogenase reversible" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_APPLDHr">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.75"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16517"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16518"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16519"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16520"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.37"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMINOPROPDEHYDROG-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95894"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02667"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_aact_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_appl_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_APRAUR" sboTerm="SBO:0000176" id="R_APRAUR" name="5-amino-6-(5-phosphoribosylamino)uracil reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66519,28 +70519,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3166"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ARSR" sboTerm="SBO:0000176" id="R_ARSR" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ARSR">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ARUH" sboTerm="SBO:0000176" id="R_ARUH" name="L Arginine pyruvate transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -66621,6 +70599,71 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ASCBPL" sboTerm="SBO:0000176" id="R_ASCBPL" name="L-ascorbate 6-phosphate lactonase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASCBPL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07492"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3dhgulnp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ASCBpts" sboTerm="SBO:0000185" id="R_ASCBpts" name="L-ascorbate transport via PEP:Pyr PTS " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ASCBpts">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ASNN" sboTerm="SBO:0000176" id="R_ASNN" name="L-asparaginase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67729,6 +71772,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3176"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ASPtex" sboTerm="SBO:0000185" id="R_ASPtex" name="L-aspartate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASPtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13232"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_asp__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_asp__L_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ASR" sboTerm="SBO:0000176" id="R_ASR" name="Arsenate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67847,6 +71918,45 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ATPHs" sboTerm="SBO:0000176" id="R_ATPHs" name="ATP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ATPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATP-DEAMINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00064"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ATPPRT" sboTerm="SBO:0000176" id="R_ATPPRT" name="ATP phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69194,32 +73304,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_BUTt2rpp" sboTerm="SBO:0000185" id="R_BUTt2rpp" name="Butyrate transport via proton symport, reversible (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_BUTt2rpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96353"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_but_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_but_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_BUTtex" sboTerm="SBO:0000185" id="R_BUTtex" name="Butyrate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69337,6 +73421,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2515"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_BZt" sboTerm="SBO:0000185" id="R_BZt" name="Benzoate transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_BZt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12436"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_bz_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_BZt1pp" sboTerm="SBO:0000185" id="R_BZt1pp" name="Benzoate transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70434,33 +74550,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA5135"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CDPPT160" sboTerm="SBO:0000176" id="R_CDPPT160" name="CDPPT160" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
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-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ptd1ino160_c" stoichiometry="1" constant="true"/>
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-      </reaction>
       <reaction metaid="R_CELASEpp" sboTerm="SBO:0000176" id="R_CELASEpp" name="Endo 1 4 D glucanase cellolose " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70512,6 +74601,28 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1163"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CELLex" sboTerm="SBO:0000185" id="R_CELLex" name="Cellulose export system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CELLex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cell4_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cell4_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CGLYabcpp" sboTerm="SBO:0000185" id="R_CGLYabcpp" name="L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -71039,33 +75150,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1681"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CHORt2" sboTerm="SBO:0000185" id="R_CHORt2" name="Chorismate transport inout via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05519"/>
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-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
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-        <listOfProducts>
-          <speciesReference species="M_chor_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_CHRPL" sboTerm="SBO:0000176" id="R_CHRPL" name="Chorismate pyruvate lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -71765,6 +75849,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CLt3_2pp" sboTerm="SBO:0000185" id="R_CLt3_2pp" name="Chloride transport out via proton antiport (2:1) (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CLt3_2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29569"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-2501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08233"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cl_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cl_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CLtex" sboTerm="SBO:0000185" id="R_CLtex" name="Chloride (Cl-1) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -71914,28 +76030,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CLtipp" sboTerm="SBO:0000185" id="R_CLtipp" name="Chloride ion transport in via diffusion (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
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-              </bqbiol:is>
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-        <listOfReactants>
-          <speciesReference species="M_cl_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_cl_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_CMCBTFL" sboTerm="SBO:0000185" id="R_CMCBTFL" name="CMCBTFL" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72003,6 +76097,119 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CMCBTFabcpp" sboTerm="SBO:0000185" id="R_CMCBTFabcpp" name="Carboxymycobactin transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fcmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fcmcbtt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2912"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2913"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2914"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CMCBTFtex" sboTerm="SBO:0000185" id="R_CMCBTFtex" name="Carboxymycobactin secretion  to extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMCBTFtonex" sboTerm="SBO:0000185" id="R_CMCBTFtonex" name="Carboxymycobactin transport via ton system  extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFtonex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fcmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0199"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1910"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CMCBTFtpp" sboTerm="SBO:0000185" id="R_CMCBTFtpp" name="Carboxymycobactin secretion  to periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cmcbtt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CMCMSAD" sboTerm="SBO:0000176" id="R_CMCMSAD" name="4 carboxy 2 hydroxymuconate 6 semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72294,6 +76501,96 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1462"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2t" sboTerm="SBO:0000185" id="R_CO2t" name="CO2 transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72384,9 +76681,100 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_PA2900"/>
             <fbc:geneProductRef fbc:geneProduct="G_PA3692"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2tpp" sboTerm="SBO:0000185" id="R_CO2tpp" name="CO2 transporter via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_COALCDH" sboTerm="SBO:0000176" id="R_COALCDH" name="Coniferyl alcohol dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72797,6 +77185,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_COt_1" sboTerm="SBO:0000185" id="R_COt_1" name="Co transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_COt_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CPPPGO" sboTerm="SBO:0000176" id="R_CPPPGO" name="Coproporphyrinogen oxidase (O2 required)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72836,6 +77253,49 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0024"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CPPPGO2" sboTerm="SBO:0000176" id="R_CPPPGO2" name="Oxygen Independent coproporphyrinogen-III oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CPPPGO2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.98.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15425"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HEMN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04704"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_amet_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_cpppg3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_dad_5_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pppg9_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0386"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1546"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CRNDH" sboTerm="SBO:0000176" id="R_CRNDH" name="Carnitine 3 dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -73968,6 +78428,104 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1549"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CYANST" sboTerm="SBO:0000176" id="R_CYANST" name="Cyanide sulfurtransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CYANST">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16884"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THIOSULFATE-SULFURTRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01416"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0589"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1292"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2603"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4956"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYANt2pp" sboTerm="SBO:0000185" id="R_CYANt2pp" name="Cyanate transport via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CYANt2pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1626"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2500"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYANtex" sboTerm="SBO:0000185" id="R_CYANtex" name="Cyanide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CYANtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08276"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cyan_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CYNTAH" sboTerm="SBO:0000176" id="R_CYNTAH" name="Cyanate aminohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74978,7 +79536,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0143"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CYTDt2pp" sboTerm="SBO:0000185" id="R_CYTDt2pp" name="Cytidine transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CYTDtex" sboTerm="SBO:0000185" id="R_CYTDtex" name="Cytidine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
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@@ -74986,29 +79544,23 @@
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+            <rdf:Description rdf:about="#R_CYTDtex">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08289"/>
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         <listOfReactants>
-          <speciesReference species="M_cytd_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cytd_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_cytd_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cytd_p" stoichiometry="1" constant="true"/>
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       <reaction metaid="R_CYTK1" sboTerm="SBO:0000176" id="R_CYTK1" name="Cytidylate kinase (CMP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -75148,6 +79700,178 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_Clt" sboTerm="SBO:0000185" id="R_Clt" name="Major Facilitator(MFS) TCDB:2.A.1.14.6" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2744242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2744349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2744361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-427570"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-975340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-975389"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-975449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10473"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cl_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_Cotpp" sboTerm="SBO:0000185" id="R_Cotpp" name="Co transport via diffusion (periplasm to cytosol)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_Cotpp">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10480"/>
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+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_Cuabc" sboTerm="SBO:0000185" id="R_Cuabc" name="Copper transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75622,21 +80346,33 @@
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         </fbc:geneProductAssociation>
       </reaction>
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+      <reaction metaid="R_DADNK" sboTerm="SBO:0000176" id="R_DADNK" name="Deoxyadenosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
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-            <rdf:Description rdf:about="#R_DADNK_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
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         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_dad_2_c" stoichiometry="1" constant="true"/>
@@ -76492,6 +81228,37 @@
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         </fbc:geneProductAssociation>
       </reaction>
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+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
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+            <rdf:Description rdf:about="#R_DATPHs">
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+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DB4PS" sboTerm="SBO:0000176" id="R_DB4PS" name="3,4-Dihydroxy-2-butanone-4-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76656,6 +81423,42 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DDGALK" sboTerm="SBO:0000176" id="R_DDGALK" name="2-dehydro-3-deoxygalactonokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DDGALK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16528"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.58"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEHYDDEOXGALACTKIN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02429"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dh3dgal_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dh3dgal6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DDGLK" sboTerm="SBO:0000176" id="R_DDGLK" name="2-dehydro-3-deoxygluconokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76740,7 +81543,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DDPGA" sboTerm="SBO:0000176" id="R_DDPGA" name="2-dehydro-3-deoxy-phosphogluconate aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DDPGALA" sboTerm="SBO:0000176" id="R_DDPGALA" name="2-dehydro-3-deoxy-6-phosphogalactonate aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -76748,34 +81551,31 @@
         </notes>
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-            <rdf:Description rdf:about="#R_DDPGA">
+            <rdf:Description rdf:about="#R_DDPGALA">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18171"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18172"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.16"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.42"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4OH2OXOGLUTARALDOL-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00470"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24465"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.55"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEHYDDEOXPHOSGALACT-ALDOL-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01064"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00783"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_4h2oglt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dh3dgal6p_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA3131"/>
-        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DESAT16" sboTerm="SBO:0000176" id="R_DESAT16" name="Palmitoyl CoA desaturase  n C160CoA   n C161CoA " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -76999,33 +81799,21 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA5336"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DGNSK" sboTerm="SBO:0000176" id="R_DGNSK" name="Deoxyguanosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DGNSK_1" sboTerm="SBO:0000176" id="R_DGNSK_1" name="ATP deoxyguanosine 5&apos;-phosphotransferase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DGNSK">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19202"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.145"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYGUANOSINE-KINASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97323"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01444"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DGNSK_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_dgsn_c" stoichiometry="1" constant="true"/>
@@ -77110,38 +81898,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0745"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHAD1" sboTerm="SBO:0000176" id="R_DHAD1" name="Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DHAD1">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24809"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24810"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24811"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/24812"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYISOVALDEHYDRAT-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97358"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04441"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_23dhmb_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_DHAD2" sboTerm="SBO:0000176" id="R_DHAD2" name="Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77290,6 +82046,171 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4228"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHBSH_1" sboTerm="SBO:0000176" id="R_DHBSH_1" name="2 3 dihydroxybenzoylserine hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHBSH_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08328"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_23dhbzs_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_DHBSZ3FEabcpp" sboTerm="SBO:0000185" id="R_DHBSZ3FEabcpp" name="23dhbsz3 Fe III transport via ABC system periplasm" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHBSZ3FEabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97371"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3dhbzs3_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe3dhbzs3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4158"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4159"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4160"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4161"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DHBSZ3FEtonex" sboTerm="SBO:0000185" id="R_DHBSZ3FEtonex" name="23dhbsz3  Fe III import" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHBSZ3FEtonex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97373"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3dhbzs3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3dhbzs3_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0931"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA5531"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA1922"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA5531"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2688"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA5531"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DHBZS2H" sboTerm="SBO:0000176" id="R_DHBZS2H" name="23DHBS polymer hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHBZS2H">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97375"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_23dhbzs2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhbzs_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_DHBZS3H" sboTerm="SBO:0000176" id="R_DHBZS3H" name="23DHBS polymer hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHBZS3H">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97376"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_23dhbzs3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhbzs2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_23dhbzs_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHDPRy" sboTerm="SBO:0000176" id="R_DHDPRy" name="Dihydrodipicolinate reductase (NADPH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77517,30 +82438,32 @@
           <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_DHNAOT_1" sboTerm="SBO:0000176" id="R_DHNAOT_1" name="1 4 dihydroxy 2 naphthoate octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHNAOT" sboTerm="SBO:0000176" id="R_DHNAOT" name="1,4-dihydroxy-2-naphthoate octaprenyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_DHNAOT_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHNAOT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10093"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
           <speciesReference species="M_dhna_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_octdp_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -77826,6 +82749,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0441"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHPPDA" sboTerm="SBO:0000176" id="R_DHPPDA" name="Diaminohydroxyphosphoribosylaminopyrimidine deaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPPDA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97430"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_25dhpp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5apru_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA3469"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHPPDA2" sboTerm="SBO:0000176" id="R_DHPPDA2" name="Diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77895,6 +82848,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4750"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHPTDCs2" sboTerm="SBO:0000176" id="R_DHPTDCs2" name="4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPTDCs2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35157"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97442"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhptd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHQS" sboTerm="SBO:0000176" id="R_DHQS" name="3-dehydroquinate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -78030,33 +83015,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0242"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DINSK" sboTerm="SBO:0000176" id="R_DINSK" name="Deoxyinosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DKGLCNR3" sboTerm="SBO:0000176" id="R_DKGLCNR3" name="2 5 diketo D gluconate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DINSK">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97464"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10055"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DKGLCNR3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_din_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_25dkglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_dimp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4167"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DLCYSR" sboTerm="SBO:0000176" id="R_DLCYSR" name="Cysteine racemase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -78928,6 +83913,28 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3563"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DRIBtex_1" sboTerm="SBO:0000185" id="R_DRIBtex_1" name="5-Deoxy-D-ribose transport by diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DRIBtex_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_5drib_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5drib_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DRPA" sboTerm="SBO:0000176" id="R_DRPA" name="Deoxyribose-phosphate aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -79880,6 +84887,58 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3014"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ECOAH1_1" sboTerm="SBO:0000176" id="R_ECOAH1_1" name="3 hydroxyacyl CoA dehydratase  3 hydroxybutanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ECOAH1_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.55"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02167"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hbycoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0745"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ECOAH2" sboTerm="SBO:0000176" id="R_ECOAH2" name="3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80905,34 +85964,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3194"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_EHGLAT" sboTerm="SBO:0000176" id="R_EHGLAT" name="L erythro 4 Hydroxyglutamate2 oxoglutarate aminotransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_EHGLAT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.23"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97908"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_e4hglu_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_4h2oglt_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ENO" sboTerm="SBO:0000176" id="R_ENO" name="Enolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -81201,6 +86232,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4023"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETHAtex" sboTerm="SBO:0000185" id="R_ETHAtex" name="Ethanolamine transport via diffusion (extracellular)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETHAtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10841"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etha_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ETHSO3abcpp" sboTerm="SBO:0000185" id="R_ETHSO3abcpp" name="Ethanesulfonate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -81370,6 +86432,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETOHtrpp" sboTerm="SBO:0000185" id="R_ETOHtrpp" name="Ethanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09764"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FA100ACPHi" sboTerm="SBO:0000176" id="R_FA100ACPHi" name="Fatty-acyl-ACP hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82634,6 +87731,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FACOAL40t2pp" sboTerm="SBO:0000185" id="R_FACOAL40t2pp" name="Fatty-acid--CoA ligase (butanoate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FACOAL40t2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99201"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_but_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_btcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FACOAL50i" sboTerm="SBO:0000176" id="R_FACOAL50i" name="Fatty acid  CoA ligase  pentanoate" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83420,7 +88547,7 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FALDtex" sboTerm="SBO:0000185" id="R_FALDtex" name="Formaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FALDtpp" sboTerm="SBO:0000185" id="R_FALDtpp" name="Formaldehyde transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -83428,7 +88555,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FALDtex">
+            <rdf:Description rdf:about="#R_FALDtpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99238"/>
@@ -83440,11 +88567,14 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FALDtpp2" sboTerm="SBO:0000185" id="R_FALDtpp2" name="Formaldehyde extrusion  pp " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -83509,6 +88639,9 @@
         <listOfProducts>
           <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FAO1" sboTerm="SBO:0000176" id="R_FAO1" name="Fatty acid oxidation (tetradecanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -85125,6 +90258,32 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3DCITCH" sboTerm="SBO:0000176" id="R_FE3DCITCH" name="Ferric dicitrate chelation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3DCITCH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3DCITR3" sboTerm="SBO:0000176" id="R_FE3DCITR3" name="Ferric dicitrate reductase  fmn " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85250,6 +90409,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3DHBZS3R" sboTerm="SBO:0000176" id="R_FE3DHBZS3R" name="Fe(III)-(2,3-dihydroxybenzoylserine)3 reductase via NADPH" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3DHBZS3R">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3dhbzs3_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhbzs3_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FE3Gabcpp" sboTerm="SBO:0000185" id="R_FE3Gabcpp" name="Iron (III) transport via ABC system (GTP) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85282,6 +90467,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4673"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine complex formation  P putida KT2440 specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3PYOVDL2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3Ri" sboTerm="SBO:0000176" id="R_FE3Ri" name="Fe(III) reduction" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85686,6 +90897,259 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FEOXAMR1" sboTerm="SBO:0000176" id="R_FEOXAMR1" name="Ferroxamine reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMR1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08511"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_feoxam_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_feoxam_un_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4331"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FEOXAMR2" sboTerm="SBO:0000176" id="R_FEOXAMR2" name="Ferroxamine reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMR2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08512"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_feoxam_un_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4331"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FEOXAMR3" sboTerm="SBO:0000176" id="R_FEOXAMR3" name="Ferroxamine reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMR3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08513"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_rbflvrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_feoxam_un_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_ribflv_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4331"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FEOXAMUtex" sboTerm="SBO:0000185" id="R_FEOXAMUtex" name="Ferroxamine (minus Fe3) secretion (to extracellular)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMUtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99554"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08515"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_un_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_feoxam_un_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FEOXAMUtpp" sboTerm="SBO:0000185" id="R_FEOXAMUtpp" name="Ferroxamine (minus Fe3) secretion (to periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMUtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99555"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08516"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_un_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_feoxam_un_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FEOXAMabcpp" sboTerm="SBO:0000185" id="R_FEOXAMabcpp" name="Ferroxamine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08509"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_feoxam_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_feoxam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2912"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2912"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2913"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2914"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FEOXAMtonex" sboTerm="SBO:0000185" id="R_FEOXAMtonex" name="Ferroxamine transport via ton system (extracellular)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FEOXAMtonex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08514"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_feoxam_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4837"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0199"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2466"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0198"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4837"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA5531"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2911"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA5531"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0969"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0970"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4837"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA5531"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FEROc" sboTerm="SBO:0000176" id="R_FEROc" name="Ferroxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85892,6 +91356,45 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3175"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FLVR" sboTerm="SBO:0000176" id="R_FLVR" name="Flavin reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FLVR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.30"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.41"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NADPH-DEHYDROGENASE-FLAVIN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03976"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ribflv_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_rbflvrd_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4331"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FLVRx" sboTerm="SBO:0000176" id="R_FLVRx" name="Flavin reductase (NAD)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -86414,6 +91917,34 @@
           <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_FRD5" sboTerm="SBO:0000176" id="R_FRD5" name="FRD5" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FRD5">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10619"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mql6_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mqn6_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FRUK" sboTerm="SBO:0000176" id="R_FRUK" name="Fructose-1-phosphate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87641,6 +93172,69 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2341"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_G3PIabcpp" sboTerm="SBO:0000185" id="R_G3PIabcpp" name="Sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PIabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08563"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pi_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_g3pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2341"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_G3PItex" sboTerm="SBO:0000185" id="R_G3PItex" name="Glycero-3-phospho-1-inositol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G3PItex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13292"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3pi_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g3pi_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_G5SD2" sboTerm="SBO:0000176" id="R_G5SD2" name="Glutamate 5 semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87811,6 +93405,30 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GAL6PI" sboTerm="SBO:0000176" id="R_GAL6PI" name="Galactose-6-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GAL6PI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99928"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dgal6p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tag6p__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GALCTD" sboTerm="SBO:0000176" id="R_GALCTD" name="Galactarate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87847,7 +93465,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4041"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GALKr" sboTerm="SBO:0000176" id="R_GALKr" name="Galactokinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GALCTND" sboTerm="SBO:0000176" id="R_GALCTND" name="Galactonate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -87855,68 +93473,104 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GALKr">
+            <rdf:Description rdf:about="#R_GALCTND">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13555"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/13556"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTOKIN-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99985"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01092"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18650"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTONDEHYDRAT-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02173"/>
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         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gal_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_galctn__D_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gal1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2dh3dgal_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2215"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GALT" sboTerm="SBO:0000176" id="R_GALT" name="Galactose 1 phosphate uridylyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GALCTNt2r" sboTerm="SBO:0000185" id="R_GALCTNt2r" name="D-galactonate transport via proton symport, reversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
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-            <rdf:Description rdf:about="#R_GALT">
+            <rdf:Description rdf:about="#R_GALCTNt2r">
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00502"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-16"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10160"/>
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             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_gal1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_galctn__D_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_galctn__D_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2210"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_GALTpts" sboTerm="SBO:0000185" id="R_GALTpts" name="Galactitol transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GALTpts">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08586"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_galt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_udpgal_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_galt1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_GALURDH" sboTerm="SBO:0000176" id="R_GALURDH" name="Galacturonate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -89564,42 +95218,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0240"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLCOAS" sboTerm="SBO:0000176" id="R_GLCOAS" name="Glutaryl-CoA synthetase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
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-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02402"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01730"/>
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-        <listOfReactants>
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-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glutar_c" stoichiometry="1" constant="true"/>
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-        <listOfProducts>
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-          <speciesReference species="M_glutcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
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-      </reaction>
       <reaction metaid="R_GLCOASYNT" sboTerm="SBO:0000176" id="R_GLCOASYNT" name="Glutaryl CoAdihydrolipoamide S succinyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -90174,32 +95792,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA5508"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLNS_1" sboTerm="SBO:0000176" id="R_GLNS_1" name="Glutamine synthetase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
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-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
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-        <listOfProducts>
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-          <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLNabc" sboTerm="SBO:0000185" id="R_GLNabc" name="L-glutamine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -90356,7 +95948,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4501"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLU5K" sboTerm="SBO:0000176" id="R_GLU5K" name="Glutamate 5-kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GLTPD" sboTerm="SBO:0000176" id="R_GLTPD" name="Galactitol-1-phosphate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -90364,67 +95956,65 @@
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-            <rdf:Description rdf:about="#R_GLU5K">
+            <rdf:Description rdf:about="#R_GLTPD">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00239"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.M6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03856"/>
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             </rdf:Description>
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         </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_galt1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tag6p__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA4565"/>
-        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLUABUTt7pp" sboTerm="SBO:0000185" id="R_GLUABUTt7pp" name="4-aminobutyrate/glutamate antiport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GLU5K" sboTerm="SBO:0000176" id="R_GLU5K" name="Glutamate 5-kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_GLUABUTt7pp">
+            <rdf:Description rdf:about="#R_GLU5K">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-261"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08628"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.11"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUTKIN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00179"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4abut_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu5p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4565"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_GLUCYS" sboTerm="SBO:0000176" id="R_GLUCYS" name="Gamma-glutamylcysteine synthetase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -90559,33 +96149,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4588"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLUDy_1" sboTerm="SBO:0000176" id="R_GLUDy_1" name="Glutamate dehydrogenase (NADP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
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-        <listOfReactants>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
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-        <listOfProducts>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLUN" sboTerm="SBO:0000176" id="R_GLUN" name="Glutaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91555,6 +97118,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYALDtpp" sboTerm="SBO:0000185" id="R_GLYALDtpp" name="Glyceraldehyde facilitated diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLYALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10164"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA3581"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLYAT" sboTerm="SBO:0000176" id="R_GLYAT" name="Glycine C-acetyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -92816,7 +98409,10 @@
           <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA3581"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3581"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_GLYGLNabcpp" sboTerm="SBO:0000185" id="R_GLYGLNabcpp" name="L Glycinylglutamine  Gly Gln  transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -94173,42 +99769,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2352"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GPDDA2pp" sboTerm="SBO:0000176" id="R_GPDDA2pp" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GPDDA2pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29320"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29321"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.4.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.4.46"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14160"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100411"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01470"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01073"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_g3pe_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_etha_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glyc3p_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GPDDA3_1" sboTerm="SBO:0000176" id="R_GPDDA3_1" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94301,6 +99861,57 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2352"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GPDDA5" sboTerm="SBO:0000176" id="R_GPDDA5" name="Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GPDDA5">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16502"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16503"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/16504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.4.44"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.1.4.44-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-6813740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00889"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g3pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc3p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2352"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GRTT" sboTerm="SBO:0000176" id="R_GRTT" name="Geranyltranstransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94996,6 +100607,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GTPCII_1" sboTerm="SBO:0000176" id="R_GTPCII_1" name="GTP cyclohydrolase II" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GTPCII_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_25dhpp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_for_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GTPDPDP" sboTerm="SBO:0000176" id="R_GTPDPDP" name="Guanosine-5&apos;-triphosphate,3&apos;-diphosphate diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95114,6 +100751,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0431"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GTPHs" sboTerm="SBO:0000176" id="R_GTPHs" name="GTP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GTPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08679"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GUACYC" sboTerm="SBO:0000176" id="R_GUACYC" name="Guanylate cyclase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95480,7 +101148,7 @@
           <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_H2ASE_syn" sboTerm="SBO:0000176" id="R_H2ASE_syn" name="Bidirectional [NiFe] Hydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2CO3D" sboTerm="SBO:0000176" id="R_H2CO3D" name="Carboxylic acid dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -95488,34 +101156,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_H2ASE_syn">
+            <rdf:Description rdf:about="#R_H2CO3D">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.12.1.3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.12.1.5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18637"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18639"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18640"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.12.1.3-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07181"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138493"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2co3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0102"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0103"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_H2CO3D" sboTerm="SBO:0000176" id="R_H2CO3D" name="Carboxylic acid dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_H2CO3D2" sboTerm="SBO:0000176" id="R_H2CO3D2" name="Carboxylic acid dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -95523,27 +101187,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_H2CO3D">
+            <rdf:Description rdf:about="#R_H2CO3D2">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138494"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_h2co3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_PA0102"/>
-            <fbc:geneProductRef fbc:geneProduct="G_PA0103"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2O2tex" sboTerm="SBO:0000185" id="R_H2O2tex" name="Hydrogen peroxide transport via diffusion (external)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -95575,6 +101236,156 @@
         <listOfProducts>
           <speciesReference species="M_h2o2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2Ot" sboTerm="SBO:0000185" id="R_H2Ot" name="H2O transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2Ot">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29668"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-432054"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2Otex" sboTerm="SBO:0000185" id="R_H2Otex" name="H2O transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -95724,6 +101535,7 @@
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             <fbc:geneProductRef fbc:geneProduct="G_PA2900"/>
             <fbc:geneProductRef fbc:geneProduct="G_PA3692"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -95871,7 +101683,41 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA4034"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4034"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2St1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2tex" sboTerm="SBO:0000185" id="R_H2tex" name="Hydrogen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -95907,6 +101753,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_H2tpp" sboTerm="SBO:0000185" id="R_H2tpp" name="Hydrogen transport diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10542"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HACD10i" sboTerm="SBO:0000176" id="R_HACD10i" name="3 hydroxyacyl CoA dehydrogenase   3 oxoheptaryl CoA " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97213,6 +103089,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HBCH" sboTerm="SBO:0000176" id="R_HBCH" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HBCH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctncoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0745"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HBCHLR" sboTerm="SBO:0000176" id="R_HBCHLR" name="(3R)-3-Hydroxybutanoyl-CoA hydro-lyase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97552,6 +103455,7 @@
             <fbc:geneProductRef fbc:geneProduct="G_PA2053"/>
             <fbc:geneProductRef fbc:geneProduct="G_PA4676"/>
             <fbc:geneProductRef fbc:geneProduct="G_PA5540"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -97970,6 +103874,40 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HG2abcpp" sboTerm="SBO:0000185" id="R_HG2abcpp" name="Mercury (Hg+2) ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HG2abcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100623"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10343"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2435"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HG2t3pp" sboTerm="SBO:0000185" id="R_HG2t3pp" name="Mercury (Hg+2) transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98000,6 +103938,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3963"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HG2tex" sboTerm="SBO:0000185" id="R_HG2tex" name="Mercury (Hg+2) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HG2tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08717"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HG2tppi" sboTerm="SBO:0000185" id="R_HG2tppi" name="Mercury  Hg2  transport via diffusion  periplasm to cytoplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98074,6 +104042,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2009"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HGt" sboTerm="SBO:0000185" id="R_HGt" name="Mercury transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HGt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08717"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA3574a"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HHDDI" sboTerm="SBO:0000176" id="R_HHDDI" name="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98104,6 +104105,39 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HIBD" sboTerm="SBO:0000176" id="R_HIBD" name="3 hydroxyisobutyrate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HIBD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100632"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2mop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1576"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2199"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HIBDkt" sboTerm="SBO:0000176" id="R_HIBDkt" name="3-hydroxyisobutyrate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98135,6 +104169,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0743"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HICITD" sboTerm="SBO:0000176" id="R_HICITD" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HICITD">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hicit_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2oxoadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1217"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HISDr" sboTerm="SBO:0000176" id="R_HISDr" name="Histidase r" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98761,6 +104824,36 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HMPSCD" sboTerm="SBO:0000176" id="R_HMPSCD" name="2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HMPSCD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100668"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hmpscoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sbzcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1649"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HMR_0188" sboTerm="SBO:0000176" id="R_HMR_0188" name="Long-Chain-Fatty-Acid Coenzyme A Ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99015,6 +105108,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1288"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HPHACA" sboTerm="SBO:0000176" id="R_HPHACA" name="2--hydroxyphenylacetate hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HPHACA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2hyoxplac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hgentis_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HPPK" sboTerm="SBO:0000176" id="R_HPPK" name="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99048,37 +105168,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HPROb" sboTerm="SBO:0000176" id="R_HPROb" name="L hydroxyproline reductase  NADP " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_HPROb">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03293"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02358"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_1p3h5c_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_HPYRI" sboTerm="SBO:0000176" id="R_HPYRI" name="Hydroxypyruvate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -99630,6 +105719,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4645"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HYDA1" sboTerm="SBO:0000185" id="R_HYDA1" name="HYDA1" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HYDA1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10968"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_mqn6_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_e" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_mql6_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4883"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HYPOE" sboTerm="SBO:0000176" id="R_HYPOE" name="Hypothetical enyme" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100918,6 +107038,28 @@
           <speciesReference species="M_indole_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_INOST_Et" sboTerm="SBO:0000185" id="R_INOST_Et" name="Myo-Inositol transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_INOST_Et">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_inost_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_INS2D" sboTerm="SBO:0000176" id="R_INS2D" name="Inositol 2-dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102903,6 +109045,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3636"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_KG6PDC" sboTerm="SBO:0000176" id="R_KG6PDC" name="3-keto-L-gulonate 6-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_KG6PDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.85"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04928"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3dhgulnp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xu5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_Kabcpp" sboTerm="SBO:0000185" id="R_Kabcpp" name="Potassium ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103870,6 +110046,108 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_LCYSTabc" sboTerm="SBO:0000185" id="R_LCYSTabc" name="Cysteate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LCYSTabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05599"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_Lcyst_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0184"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3448"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_LCYSTabcpp" sboTerm="SBO:0000185" id="R_LCYSTabcpp" name="L-cysteate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LCYSTabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05599"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_Lcyst_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_Lcyst_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0184"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2307"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_LCYSTtex" sboTerm="SBO:0000185" id="R_LCYSTtex" name="L-cysteate transport via ABC system  (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LCYSTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101035"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_Lcyst_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2900"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3692"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_LDGUNPD" sboTerm="SBO:0000176" id="R_LDGUNPD" name="Linear diguanylate phosphodiesterase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104515,6 +110793,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_LEVUACOAL" sboTerm="SBO:0000176" id="R_LEVUACOAL" name="Levulinate CoA ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_LEVUACOAL">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LGTHL" sboTerm="SBO:0000176" id="R_LGTHL" name="Lactoylglutathione lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105643,6 +111947,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2152"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MAL6PG" sboTerm="SBO:0000176" id="R_MAL6PG" name="Maltose 6  phosphate glucosidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MAL6PG">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20421"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTOSE-6-PHOSPHATE-GLUCOSIDASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00607"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malt6p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MALDt2_2pp" sboTerm="SBO:0000185" id="R_MALDt2_2pp" name="D-Malate transport via proton symport (2 H) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105703,6 +112042,38 @@
           <speciesReference species="M_mal__D_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_MALEI" sboTerm="SBO:0000176" id="R_MALEI" name="Maleate cis trans isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALEI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.2.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEATE-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00803"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_male_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MALS" sboTerm="SBO:0000176" id="R_MALS" name="Malate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105860,67 +112231,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2151"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MALTTRabcpp" sboTerm="SBO:0000185" id="R_MALTTRabcpp" name="Maltotriose transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_MALTTRabcpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-503"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101358"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08875"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_malttr_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_malttr_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_PA2341"/>
-        </fbc:geneProductAssociation>
-      </reaction>
-      <reaction metaid="R_MALTTRtexi" sboTerm="SBO:0000185" id="R_MALTTRtexi" name="Maltotriose transport via diffusion (extracellular to periplasm) irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_MALTTRtexi">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08876"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_malttr_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_malttr_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MALTabc" sboTerm="SBO:0000185" id="R_MALTabc" name="Maltose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105965,6 +112275,147 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MALTabcpp" sboTerm="SBO:0000185" id="R_MALTabcpp" name="Maltose transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALTabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22132#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22133#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22134#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22135#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.19"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.6.3.19-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-16-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08867"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2341"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MALTpts" sboTerm="SBO:0000185" id="R_MALTpts" name="Maltose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALTpts">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08872"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_malt6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MALTptspp" sboTerm="SBO:0000185" id="R_MALTptspp" name="Maltose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALTptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08872"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_malt6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MALTtexi" sboTerm="SBO:0000185" id="R_MALTtexi" name="MaltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALTtexi">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/33174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_malt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MAL_D_Et" sboTerm="SBO:0000185" id="R_MAL_D_Et" name="D-Malate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106273,6 +112724,91 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MANptspp" sboTerm="SBO:0000185" id="R_MANptspp" name="D-mannose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08885"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_man_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MANtex" sboTerm="SBO:0000185" id="R_MANtex" name="D-mannose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12997"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_man_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_man_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_MB2CFO" sboTerm="SBO:0000176" id="R_MB2CFO" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MB2CFO">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m2bcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2mb2coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1631"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MBCOAi" sboTerm="SBO:0000176" id="R_MBCOAi" name="3-Methylbutanoyl-CoA:(acceptor) 2,3-oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106334,6 +112870,48 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MCBTS3" sboTerm="SBO:0000176" id="R_MCBTS3" name="MCBTS3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MCBTS3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10710"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__L_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="3.5" constant="true"/>
+          <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cmcbtt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="5" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4226"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MCCC" sboTerm="SBO:0000176" id="R_MCCC" name="Methylcrotonoyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106520,6 +113098,44 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0795"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MCPST" sboTerm="SBO:0000176" id="R_MCPST" name="3-mercaptopyruvate sulfurtransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MCPST">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MERCAPYSTRANS-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mercppyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2603"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MCSNAH" sboTerm="SBO:0000176" id="R_MCSNAH" name="5-Methylcytosine aminohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107208,29 +113824,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MECDPDH" sboTerm="SBO:0000176" id="R_MECDPDH" name="2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MECDPDH3_syn" sboTerm="SBO:0000176" id="R_MECDPDH3_syn" name="2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase (FRDX)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_MECDPDH">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101447"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10092"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MECDPDH3_syn">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_2mecdp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fdxrd_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_fdxo_2_2_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_h2mb4p_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
@@ -107328,6 +113943,76 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MEOHtex" sboTerm="SBO:0000185" id="R_MEOHtex" name="Methanol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MEOHtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10570"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2900"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3692"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MEOHtrpp" sboTerm="SBO:0000185" id="R_MEOHtrpp" name="Methanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_MEOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34872"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34874"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10570"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MEPCT" sboTerm="SBO:0000176" id="R_MEPCT" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107501,7 +114186,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0374"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METS" sboTerm="SBO:0000176" id="R_METS" name="Methionine synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METOX1s" sboTerm="SBO:0000176" id="R_METOX1s" name="Methionine oxidation (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -107509,90 +114194,98 @@
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-            <rdf:Description rdf:about="#R_METS">
+            <rdf:Description rdf:about="#R_METOX1s">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09942"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_PA1843"/>
-            <fbc:geneProductRef fbc:geneProduct="G_PA1927"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX1abc" sboTerm="SBO:0000185" id="R_METSOX1abc" name="L-Methionine S-oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METOX2s" sboTerm="SBO:0000176" id="R_METOX2s" name="Methionine oxidation 2 (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_METSOX1abc">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METOX2s">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-7188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08913"/>
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             </rdf:Description>
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-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX2abc" sboTerm="SBO:0000185" id="R_METSOX2abc" name="L-Methionine R-oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METS" sboTerm="SBO:0000176" id="R_METS" name="Methionine synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_METSOX2abc">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00946"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1843"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1927"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_METSOXR1" sboTerm="SBO:0000176" id="R_METSOXR1" name="L-methionine-S-oxide reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -107719,6 +114412,134 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_METSR_R1" sboTerm="SBO:0000176" id="R_METSR_R1" name="L methionine R oxide reductase  trdrd " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSR_R1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09940"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_metox__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_METSR_S1" sboTerm="SBO:0000176" id="R_METSR_S1" name="L methionine S oxide reductase  trdrd " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSR_S1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08918"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_metox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_METSRabc" sboTerm="SBO:0000185" id="R_METSRabc" name="L methionine R oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSRabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05614"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0374"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_METSabc" sboTerm="SBO:0000185" id="R_METSabc" name="L methionine S oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METSabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08914"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0374"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_METabc" sboTerm="SBO:0000185" id="R_METabc" name="L-methionine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108177,6 +114998,9 @@
           <speciesReference species="M_mthgxl_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MGt2pp" sboTerm="SBO:0000185" id="R_MGt2pp" name="Magnesium transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -108370,6 +115194,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3818"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MI1PS" sboTerm="SBO:0000176" id="R_MI1PS" name="Myo Inositol 1 phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MI1PS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.5.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00609"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MICITDr" sboTerm="SBO:0000176" id="R_MICITDr" name="2-methylisocitrate dehydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108660,6 +115510,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4183"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MLTG2" sboTerm="SBO:0000176" id="R_MLTG2" name="Maltodextrin glucosidase (maltotetraose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MLTG2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALTET-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08933"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_maltttr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glc__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malttr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MLTGY1pp" sboTerm="SBO:0000176" id="R_MLTGY1pp" name="Murein lytic transglycosylase (murein4p4p) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108936,6 +115814,53 @@
           <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_MMSAD1" sboTerm="SBO:0000176" id="R_MMSAD1" name="Methylmalonate semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MMSAD1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.27"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00922"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00671"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2mop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MMSAD3" sboTerm="SBO:0000176" id="R_MMSAD3" name="Methylmalonate-semialdehyde dehydrogenase (malonic semialdehyde)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109454,33 +116379,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MOBDabc_rev" sboTerm="SBO:0000185" id="R_MOBDabc_rev" name="T06232b" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MOBDabc_rev">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mobd_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mobd_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MOBDabcpp" sboTerm="SBO:0000185" id="R_MOBDabcpp" name="Molybdate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110128,6 +117026,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0430"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MTHTHFSs" sboTerm="SBO:0000176" id="R_MTHTHFSs" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MTHTHFSs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101756"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mththf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MTI" sboTerm="SBO:0000176" id="R_MTI" name="Maltose trehalose isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110466,6 +117397,64 @@
           <speciesReference species="M_m_xyl_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_N2Otex" sboTerm="SBO:0000185" id="R_N2Otex" name="Nitrious oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_N2Otex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08967"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_n2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_n2o_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_NACHY" sboTerm="SBO:0000176" id="R_NACHY" name="Nicotinic acid 6 Hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NACHY">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12747"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1601"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1602"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NACODA" sboTerm="SBO:0000176" id="R_NACODA" name="N-acetylornithine deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110895,6 +117884,9 @@
         <listOfProducts>
           <speciesReference species="M_nadhx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHNQR" sboTerm="SBO:0000185" id="R_NADHNQR" name="NADH: quinone oxidoreductas, NQR-type" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -111109,6 +118101,9 @@
         <listOfProducts>
           <speciesReference species="M_nadphx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHQR2" sboTerm="SBO:0000176" id="R_NADPHQR2" name="NADPH Quinone Reductase (Ubiquinone-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -112395,6 +119390,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3807"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NFMLDF" sboTerm="SBO:0000176" id="R_NFMLDF" name="N Formyl maleate deformylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NFMLDF">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101944"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12748"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_for_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NFORGLUAH2" sboTerm="SBO:0000176" id="R_NFORGLUAH2" name="N Formyl L glutamate amidohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112423,6 +119453,62 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA5091"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NH3c" sboTerm="SBO:0000176" id="R_NH3c" name="Ammomnium proton dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH3c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101948"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4OHDs" sboTerm="SBO:0000176" id="R_NH4OHDs" name="NH4OH dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4OHDs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10772"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4oh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NH4t3pp" sboTerm="SBO:0000185" id="R_NH4t3pp" name="Ammonia transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -112503,6 +119589,7 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_PA2900"/>
             <fbc:geneProductRef fbc:geneProduct="G_PA3692"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -112559,6 +119646,7 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_PA3039"/>
             <fbc:geneProductRef fbc:geneProduct="G_PA5287"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -112983,6 +120071,71 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0143"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NMNPtpp" sboTerm="SBO:0000185" id="R_NMNPtpp" name="NMN permease (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NMNPtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10181"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nmn_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1958"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NMNtex" sboTerm="SBO:0000185" id="R_NMNtex" name="NMN transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NMNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10181"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nmn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nmn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NNAM" sboTerm="SBO:0000176" id="R_NNAM" name="Nicotinamidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113795,6 +120948,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1288"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NORZpp" sboTerm="SBO:0000185" id="R_NORZpp" name="Nitric Oxide reductase (cytochrome b) periplasmic" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NORZpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102004"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no_p" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n2o_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0524"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NOVBCNtex" sboTerm="SBO:0000185" id="R_NOVBCNtex" name="Novobiocin transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113822,6 +121005,9 @@
         <listOfProducts>
           <speciesReference species="M_novbcn_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NOVBCNtpp" sboTerm="SBO:0000185" id="R_NOVBCNtpp" name="Novobiocin transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -113925,6 +121111,30 @@
           <speciesReference species="M_no_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_NOtex" sboTerm="SBO:0000185" id="R_NOtex" name="Nitric oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NOtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101998"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_no_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_no_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NPHS" sboTerm="SBO:0000176" id="R_NPHS" name="Naphthoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114896,6 +122106,118 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP10" sboTerm="SBO:0000176" id="R_NTPP10" name="Nucleoside triphosphate pyrophosphorylase (ditp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP10">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1602"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02518"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dimp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0387"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NTPP11" sboTerm="SBO:0000176" id="R_NTPP11" name="Nucleoside triphosphate pyrophosphorylase (xtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP11">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01962"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0387"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPP2" sboTerm="SBO:0000176" id="R_NTPP2" name="Nucleoside triphosphate pyrophosphorylase (gtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115191,6 +122513,63 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP9" sboTerm="SBO:0000176" id="R_NTPP9" name="Nucleoside triphosphate pyrophosphorylase (itp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP9">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00514"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0387"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPTP1" sboTerm="SBO:0000176" id="R_NTPTP1" name="Nucleoside triphosphate tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115389,6 +122768,111 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1780"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTRIRx" sboTerm="SBO:0000176" id="R_NTRIRx" name="Nitrite reductase (NADH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTRIRx">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn14028"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nh4oh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1780"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3530"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NTRIRy" sboTerm="SBO:0000176" id="R_NTRIRy" name="Nitrite reductase (NADPH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTRIRy">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.7.1.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn14395"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nh4oh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1780"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3530"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_O2tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="O2 transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115418,6 +122902,9 @@
         <listOfProducts>
           <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OAADC" sboTerm="SBO:0000176" id="R_OAADC" name="Oxaloacetate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -116177,6 +123664,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_OIVD2E" sboTerm="SBO:0000176" id="R_OIVD2E" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_OIVD2E">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3mop_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_m2bcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_OIVD3" sboTerm="SBO:0000176" id="R_OIVD3" name="2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxopentanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -116261,6 +123775,9 @@
           <speciesReference species="M_4mop_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OMPDC" sboTerm="SBO:0000176" id="R_OMPDC" name="Orotidine-5&apos;-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -117648,31 +125165,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4889"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PACOAT" sboTerm="SBO:0000176" id="R_PACOAT" name="Phenylacetyl-CoA thioesterase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_PACOAT">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phaccoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pac_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PACPT_1" sboTerm="SBO:0000176" id="R_PACPT_1" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118755,40 +126247,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PDXPP" sboTerm="SBO:0000176" id="R_PDXPP" name="Pyridoxine 5-phosphate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PDXPP">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25112"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14181"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01911"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01398"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pdx5p_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pydxn_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PE120abcpp" sboTerm="SBO:0000185" id="R_PE120abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119095,6 +126553,86 @@
           <speciesReference species="M_pea_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PEAMNO" sboTerm="SBO:0000176" id="R_PEAMNO" name="Phenethylamine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PEAMNO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMINEPHEN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-141200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01903"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peamn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pacald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PEAMNtex" sboTerm="SBO:0000185" id="R_PEAMNtex" name="Phenethylamine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PEAMNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11405"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_peamn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PEAOpp" sboTerm="SBO:0000176" id="R_PEAOpp" name="PhenylethylalcoholPQQ oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119123,6 +126661,69 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1982"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PEAtabcpp" sboTerm="SBO:0000185" id="R_PEAtabcpp" name="Phenyl ethylamine transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PEAtabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peamn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA4143"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_PENAM" sboTerm="SBO:0000176" id="R_PENAM" name="Penicillin Amidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PENAM">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.11"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-17099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02871"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peng_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6apa_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pac_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1893"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PENTSOtex" sboTerm="SBO:0000185" id="R_PENTSOtex" name="Pentasulfonate transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119151,6 +126752,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0291"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PEPA" sboTerm="SBO:0000176" id="R_PEPA" name="MNXR86162" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PEPA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malt6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0766"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PERD" sboTerm="SBO:0000176" id="R_PERD" name="Erythronate 4-phosphate (4per) dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119226,6 +126854,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1919"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PFOR" sboTerm="SBO:0000176" id="R_PFOR" name="Pyruvate flavodoxin oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PFOR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.7.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.7.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYFLAVOXRE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R10866"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldrd_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PG120abcpp" sboTerm="SBO:0000185" id="R_PG120abcpp" name="Phosphatidylglycerol transport via ABC system (n-C12:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119773,6 +127434,49 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2263"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PGLYCP" sboTerm="SBO:0000176" id="R_PGLYCP" name="Phosphoglycolate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PGLYCP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GPH-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00980"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0065"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0608"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0810"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2974"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA3172"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PGM" sboTerm="SBO:0000176" id="R_PGM" name="Phosphoglycerate mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120823,6 +128527,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0782"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PHCHGS" sboTerm="SBO:0000176" id="R_PHCHGS" name="PHCHGS" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PHCHGS">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04443"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03070"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_1p3h5c_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hglusa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PHEDCAtexi" sboTerm="SBO:0000185" id="R_PHEDCAtexi" name="1  Phenyldecanoic acid transport via diffusion  extracellular to periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121772,33 +129505,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3613"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PLCD" sboTerm="SBO:0000176" id="R_PLCD" name="PLCD" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PLCD">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102900"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ptd1ino160_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PLIPA1E120pp" sboTerm="SBO:0000176" id="R_PLIPA1E120pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C12:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123351,6 +131057,46 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0747"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PPOR" sboTerm="SBO:0000176" id="R_PPOR" name="Phenylpyruvate:oxygen oxidoreductase (hydroxylating,decarboxylating)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PPOR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.27"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31109"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00999"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_phpyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2hyoxplac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0550"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0865"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PPPGO" sboTerm="SBO:0000176" id="R_PPPGO" name="Protoporphyrinogen oxidase (aerobic)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124283,21 +132029,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4670"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PSCVT_1" sboTerm="SBO:0000176" id="R_PSCVT_1" name="3-phosphoshikimate 1-carboxyvinyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PSCVT" sboTerm="SBO:0000176" id="R_PSCVT" name="3-phosphoshikimate 1-carboxyvinyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_PSCVT_1">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PSCVT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.19"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21258"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.5.1.19-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MTU-964886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02476"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
           <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_skm5p_c" stoichiometry="1" constant="true"/>
@@ -124826,6 +132583,30 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PTHRP" sboTerm="SBO:0000176" id="R_PTHRP" name="Phospho-threonine phosphatase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PTHRP">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thrp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PTHRpp" sboTerm="SBO:0000176" id="R_PTHRpp" name="Phospho-L-threonine phosphatase (periplasmic)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124917,39 +132698,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0363"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PTRCORNt7pp" sboTerm="SBO:0000185" id="R_PTRCORNt7pp" name="Putrescine/ornithine antiporter (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PTRCORNt7pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28827"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28830"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10182"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ptrc_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_orn_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PTRCTA" sboTerm="SBO:0000176" id="R_PTRCTA" name="Putrescine Transaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125767,6 +133515,39 @@
           <speciesReference species="M_pydxn_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PYDXO" sboTerm="SBO:0000176" id="R_PYDXO" name="Pyridoxal oxidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYDXO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09566"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/>
+          <speciesReference species="M_pydx_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pydam_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1905"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PYK" sboTerm="SBO:0000176" id="R_PYK" name="Pyruvate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125915,6 +133696,74 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2393"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PYRDOX" sboTerm="SBO:0000176" id="R_PYRDOX" name="2 5 dihydroxypyridine dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYRDOX">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.13.11.9-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12749"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PYRZAM" sboTerm="SBO:0000176" id="R_PYRZAM" name="Pyrazinamidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYRZAM">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_male_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PYRt2" sboTerm="SBO:0000185" id="R_PYRt2" name="Pyruvate transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125951,7 +133800,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2114"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PYRt4pp" sboTerm="SBO:0000185" id="R_PYRt4pp" name="Pyruvate transport via sodium symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PYRt2rpp" sboTerm="SBO:0000185" id="R_PYRt2rpp" name="Pyruvate reversible transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -125959,21 +133808,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PYRt4pp">
+            <rdf:Description rdf:about="#R_PYRt2rpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-372359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-372342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-372347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09717"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09832"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -126122,7 +133978,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0244"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_QUIN2tex" sboTerm="SBO:0000185" id="R_QUIN2tex" name="Quinate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_QUIN2tpp" sboTerm="SBO:0000185" id="R_QUIN2tpp" name="Quinate transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -126130,7 +133986,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_QUIN2tex">
+            <rdf:Description rdf:about="#R_QUIN2tpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/35195"/>
@@ -126145,10 +134001,10 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_QUINtpp" sboTerm="SBO:0000185" id="R_QUINtpp" name="Quinateproton symport transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -126427,6 +134283,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1950"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_RBP4E" sboTerm="SBO:0000176" id="R_RBP4E" name="L-ribulose-phosphate 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RBP4E">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RIBULPEPIM-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04082"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ru5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_RECOAH10" sboTerm="SBO:0000176" id="R_RECOAH10" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxynonanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -127111,7 +134999,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA4980"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_RHA40tex" sboTerm="SBO:0000185" id="R_RHA40tex" name="R 3 Hydroxy acid transport diffusion C40  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHA40tpp" sboTerm="SBO:0000185" id="R_RHA40tpp" name="R 3 Hydroxy acid transport diffusion C40   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -127119,7 +135007,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_RHA40tex">
+            <rdf:Description rdf:about="#R_RHA40tpp">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -127130,7 +135018,7 @@
           <speciesReference species="M_bhb_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_bhb_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_RHACOAE100" sboTerm="SBO:0000176" id="R_RHACOAE100" name="R hydroxy acyl CoA thioesterase  C100 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -128416,7 +136304,51 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2967"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_RHCYS" sboTerm="SBO:0000176" id="R_RHCYS" name="5 deoxyribos 5 ylhomocysteinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHAP50tex" sboTerm="SBO:0000185" id="R_RHAP50tex" name="R 3 Hydroxyphenyl acid transport diffusion C50  extracellularperiplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHAP50tex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hppta_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hppta_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_RHAP50tpp" sboTerm="SBO:0000185" id="R_RHAP50tpp" name="R 3 Hydroxyphenyl acid transport diffusion C50   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHAP50tpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hppta_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hppta_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_RHCCE" sboTerm="SBO:0000176" id="R_RHCCE" name="S-ribosylhomocysteine cleavage enzyme" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -128424,24 +136356,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_RHCYS">
+            <rdf:Description rdf:about="#R_RHCCE">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17754"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17756"/>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RIBOSYLHOMOCYSTEINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn14169"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_rhcys_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_dhptd_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_RIBabc" sboTerm="SBO:0000185" id="R_RIBabc" name="D-ribose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -128915,6 +136853,154 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3533"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_RNTR1c" sboTerm="SBO:0000176" id="R_RNTR1c" name="Ribonucleoside-triphosphate reductase (ATP) (flavodoxin)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RNTR1c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104071"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_RNTR2c" sboTerm="SBO:0000176" id="R_RNTR2c" name="Ribonucleoside-triphosphate reductase (GTP) (flavodoxin)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RNTR2c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104074"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fldrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dgtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_RNTR3c" sboTerm="SBO:0000176" id="R_RNTR3c" name="Ribonucleoside-triphosphate reductase (CTP) (flavodoxin)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RNTR3c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104077"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ctp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldrd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dctp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_RNTR4c" sboTerm="SBO:0000176" id="R_RNTR4c" name="Ribonucleoside-triphosphate reductase (UTP) (flavodoxin)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RNTR4c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104080"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fldrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dutp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fldox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA1920"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA2726"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_RPE" sboTerm="SBO:0000176" id="R_RPE" name="Ribulose 5-phosphate 3-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129114,6 +137200,195 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SALADC2" sboTerm="SBO:0000176" id="R_SALADC2" name="Sulfinoalanine decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALADC2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25221"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25223"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.29"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CYSTAUR-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01231"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_Lcyst_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_taur_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHS1H" sboTerm="SBO:0000176" id="R_SALCHS1H" name="Salmochelin s1 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS1H">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104243"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs1_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_23dhbzs_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchsx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHS2FER3" sboTerm="SBO:0000176" id="R_SALCHS2FER3" name="Salmochelin s2 Fe III reduction and offloading" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2FER3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104246"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_rbflvrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_ribflv_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHS2FEabcpp" sboTerm="SBO:0000185" id="R_SALCHS2FEabcpp" name="Salmochelin s2 Fe III transport via ABC system periplasm" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2FEabcpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104247"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4158"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4159"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4160"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4158"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4159"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4160"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4161"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_SALCHS2FEtonex" sboTerm="SBO:0000185" id="R_SALCHS2FEtonex" name="Salmochelin s2 Fe III import" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2FEtonex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104249"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2fe_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0931"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_SALCHS2H" sboTerm="SBO:0000176" id="R_SALCHS2H" name="Salmochelin s2 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS2H">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104250"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchs1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchsx_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SALCHS2tex" sboTerm="SBO:0000185" id="R_SALCHS2tex" name="Salmochelin s2 secretion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129138,6 +137413,34 @@
           <speciesReference species="M_salchs2_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SALCHS4FEHpp" sboTerm="SBO:0000176" id="R_SALCHS4FEHpp" name="Salmochelin s4 fe3 hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHS4FEHpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104252"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salchs4fe_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchs2fe_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2689"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SALCHS4FER3" sboTerm="SBO:0000176" id="R_SALCHS4FER3" name="Salmochelin S4 Fe III reduction Fe III unloading " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129327,6 +137630,107 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SALCHSXtex" sboTerm="SBO:0000185" id="R_SALCHSXtex" name="Salmochelin SX via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHSXtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104262"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_salchsx_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchsx_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCHSXtpp" sboTerm="SBO:0000185" id="R_SALCHSXtpp" name="Salmochelin SX facilitated transport periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SALCHSXtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104262"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_salchsx_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salchsx_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SALCOD" sboTerm="SBO:0000176" id="R_SALCOD" name="Salicylate NADH oxygen oxidoreductase 1-hydroxylating  " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SALCOD">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_catechol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2587"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_SALCt" sboTerm="SBO:0000185" id="R_SALCt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SALCt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_salc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salc_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SAOR" sboTerm="SBO:0000176" id="R_SAOR" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129436,6 +137840,73 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SBTPD" sboTerm="SBO:0000176" id="R_SBTPD" name="Sorbitol-6-phosphate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SBTPD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05607"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sbt6p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SBTpts" sboTerm="SBO:0000185" id="R_SBTpts" name="D-sorbitol transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SBTpts">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10184"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sbt__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sbt6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SCYSSL" sboTerm="SBO:0000176" id="R_SCYSSL" name="S-sulfo-L-cysteine sulfite lyase " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129659,6 +138130,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SELt" sboTerm="SBO:0000185" id="R_SELt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SELt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SELtex" sboTerm="SBO:0000185" id="R_SELtex" name="Selenate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131095,6 +139588,58 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0265"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_STAS" sboTerm="SBO:0000176" id="R_STAS" name="Staphyloferrin A synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_STAS">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_stfrnA_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_STFRNAt" sboTerm="SBO:0000185" id="R_STFRNAt" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_STFRNAt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_stfrnA_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_stfrnA_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA2701"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_STPT1" sboTerm="SBO:0000176" id="R_STPT1" name="Phosphoserine:homoserine phosphotransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131124,6 +139669,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA5177"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_STPT2" sboTerm="SBO:0000176" id="R_STPT2" name="Threonine phosphotransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_STPT2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104600"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pser__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thr__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thrp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA5177"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SUCCt2_2pp" sboTerm="SBO:0000185" id="R_SUCCt2_2pp" name="Succinate transport via proton symport (2 H) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131362,6 +139936,31 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SUCRtex" sboTerm="SBO:0000185" id="R_SUCRtex" name="Sucrose transport transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SUCRtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09275"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_sucr_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sucr_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SUCpts" sboTerm="SBO:0000185" id="R_SUCpts" name="Sucrose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131399,6 +139998,37 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SUCptspp" sboTerm="SBO:0000185" id="R_SUCptspp" name="Sucrose transport via PEP:Pyr  (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SUCptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09274"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sucr_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_suc6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SULAabc" sboTerm="SBO:0000185" id="R_SULAabc" name="Sulfoacetate transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131939,6 +140569,56 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TCYNTtex" sboTerm="SBO:0000185" id="R_TCYNTtex" name="Thiocyanate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TCYNTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09287"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TCYNTtpp" sboTerm="SBO:0000185" id="R_TCYNTtpp" name="Thiocyanate transport via diffusion  periplasm to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TCYNTtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tcynt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TDP" sboTerm="SBO:0000176" id="R_TDP" name="Thiamin pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132195,70 +140875,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_THMabcpp" sboTerm="SBO:0000185" id="R_THMabcpp" name="Thiamine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_THMabcpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138862"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05177"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09297"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thm_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thm_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_PA0073"/>
-            <fbc:geneProductRef fbc:geneProduct="G_PA3252"/>
-            <fbc:geneProductRef fbc:geneProduct="G_PA3838"/>
-          </fbc:or>
-        </fbc:geneProductAssociation>
-      </reaction>
-      <reaction metaid="R_THMtex" sboTerm="SBO:0000185" id="R_THMtex" name="Thiamine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_THMtex">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR131128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09300"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11006"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_thm_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_thm_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_THRA" sboTerm="SBO:0000176" id="R_THRA" name="Threonine aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132369,40 +140985,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_THRPDC" sboTerm="SBO:0000176" id="R_THRPDC" name="L threonine phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_THRPDC">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11492"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11493"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11494"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/11495"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.81"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4.1.1.81-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04385"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thrp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_applp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_THRPtex" sboTerm="SBO:0000185" id="R_THRPtex" name="Phospho-L-threonine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132855,28 +141437,52 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA0548"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TMDK2" sboTerm="SBO:0000176" id="R_TMDK2" name="Thymidine kinase GTPThymidine " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TMDK1" sboTerm="SBO:0000176" id="R_TMDK1" name="Thymidine kinase (ATP:thymidine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_TMDK2">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TMDK1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THYKI-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-73632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01143"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_thymd_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_dtmp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -133049,6 +141655,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TNTHAC2" sboTerm="SBO:0000176" id="R_TNTHAC2" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -133074,6 +141683,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TNTR1" sboTerm="SBO:0000176" id="R_TNTR1" name="TNT nitroreductase 4 Hydroxylamino 2 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -133617,6 +142229,61 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TRE6P_Et" sboTerm="SBO:0000185" id="R_TRE6P_Et" name="Alpha,alpha&apos;-Trehalose 6-phosphate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_TRE6P_Et">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_tre6p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tre6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_TREH" sboTerm="SBO:0000176" id="R_TREH" name="Alpha,alpha-trehalase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TREH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.28"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00007"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glc__D_c" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_TREHpp" sboTerm="SBO:0000176" id="R_TREHpp" name="Alpha,alpha-trehalase (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133686,6 +142353,76 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA2340"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TREpts" sboTerm="SBO:0000185" id="R_TREpts" name="Trehalose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TREpts">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.69"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09322"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+              <fbc:geneProductRef fbc:geneProduct="G_PA4466"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TREptspp" sboTerm="SBO:0000185" id="R_TREptspp" name="Trehalose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TREptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.69"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02005"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09322"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tre6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA0337"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TREtex" sboTerm="SBO:0000185" id="R_TREtex" name="Trehalose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134714,6 +143451,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA3148"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UAG4Ei" sboTerm="SBO:0000176" id="R_UAG4Ei" name="UDP-N-acetylglucosamine 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UAG4Ei">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00295"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_udpacgal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_PA1384"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_UAGAAT" sboTerm="SBO:0000176" id="R_UAGAAT" name="UDP-N-acetylglucosamine acyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136453,6 +145221,61 @@
           <fbc:geneProductRef fbc:geneProduct="G_PA1288"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_VACOAI" sboTerm="SBO:0000176" id="R_VACOAI" name="Vinylacetyl-CoA Delta-isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VACOAI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10572"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.3.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VINYLACETYL-COA-DELTA-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02171"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_vaccoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_VACOAI_2" sboTerm="SBO:0000176" id="R_VACOAI_2" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_VACOAI_2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_vaccoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctncoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_VALDHr" sboTerm="SBO:0000176" id="R_VALDHr" name="Valine dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137110,6 +145933,39 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_X5PL3E" sboTerm="SBO:0000176" id="R_X5PL3E" name="L-xylulose 5-phosphate 3-epimerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_X5PL3E">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.-.-.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LXULRU5P-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02321"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_xu5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ru5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_XAND" sboTerm="SBO:0000176" id="R_XAND" name="Xanthine dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137204,7 +146060,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_XANtpp" sboTerm="SBO:0000185" id="R_XANtpp" name="Xanthine reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_XANtex" sboTerm="SBO:0000185" id="R_XANtex" name="Xanthine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -137212,7 +146068,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_XANtpp">
+            <rdf:Description rdf:about="#R_XANtex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-561"/>
@@ -137226,10 +146082,10 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xan_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_XPPT" sboTerm="SBO:0000176" id="R_XPPT" name="Xanthine phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -138279,6 +147135,16 @@
           <speciesReference species="M_2ohph_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_sink_aacald_c" sboTerm="SBO:0000632" id="R_sink_aacald_c" name="R_sink_aacald_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000632</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_sink_hemeO_c" sboTerm="SBO:0000632" id="R_sink_hemeO_c" name="R_sink_hemeO_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138299,14 +147165,14 @@
           <speciesReference species="M_mobd_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_sink_sheme_c" sboTerm="SBO:0000632" id="R_sink_sheme_c" name="R_sink_sheme_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_25dkglcn_e" sboTerm="SBO:0000627" id="R_EX_25dkglcn_e" name="R_EX_25dkglcn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000632</p>
+            <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_sheme_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_25dkglcn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_2ameph_e" sboTerm="SBO:0000627" id="R_EX_2ameph_e" name="R_EX_2ameph_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -138329,6 +147195,16 @@
           <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_2pglyc_e" sboTerm="SBO:0000627" id="R_EX_2pglyc_e" name="R_EX_2pglyc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_34dhbz_e" sboTerm="SBO:0000627" id="R_EX_34dhbz_e" name="R_EX_34dhbz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138429,24 +147305,24 @@
           <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_4abz_e" sboTerm="SBO:0000627" id="R_EX_4abz_e" name="R_EX_4abz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_4hba_e" sboTerm="SBO:0000627" id="R_EX_4hba_e" name="R_EX_4hba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4abz_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_4hba_e" sboTerm="SBO:0000627" id="R_EX_4hba_e" name="R_EX_4hba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_4hbald_e" sboTerm="SBO:0000627" id="R_EX_4hbald_e" name="R_EX_4hbald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_4hbz_e" sboTerm="SBO:0000627" id="R_EX_4hbz_e" name="R_EX_4hbz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -138469,14 +147345,14 @@
           <speciesReference species="M_4hoxpac_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_4hpro_DC_e" sboTerm="SBO:0000627" id="R_EX_4hpro_DC_e" name="R_EX_4hpro_DC_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_4oxptn_e" sboTerm="SBO:0000627" id="R_EX_4oxptn_e" name="R_EX_4oxptn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_4hpro_DC_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_5aptn_e" sboTerm="SBO:0000627" id="R_EX_5aptn_e" name="R_EX_5aptn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -138489,6 +147365,16 @@
           <speciesReference species="M_5aptn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_5drib_e" sboTerm="SBO:0000627" id="R_EX_5drib_e" name="R_EX_5drib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_5drib_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_6atha_e" sboTerm="SBO:0000627" id="R_EX_6atha_e" name="R_EX_6atha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138499,6 +147385,16 @@
           <speciesReference species="M_6atha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_6hnac_e" sboTerm="SBO:0000627" id="R_EX_6hnac_e" name="R_EX_6hnac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_LalaLglu_e" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e" name="R_EX_LalaLglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138509,6 +147405,26 @@
           <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_Lcyst_e" sboTerm="SBO:0000627" id="R_EX_Lcyst_e" name="R_EX_Lcyst_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_R_3hppta_e" sboTerm="SBO:0000627" id="R_EX_R_3hppta_e" name="R_EX_R_3hppta_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_R_3hppta_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ac_e" sboTerm="SBO:0000627" id="R_EX_ac_e" name="R_EX_ac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138549,6 +147465,16 @@
           <speciesReference species="M_acgam_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_acmana_e" sboTerm="SBO:0000627" id="R_EX_acmana_e" name="R_EX_acmana_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_acmana_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_acon_C_e" sboTerm="SBO:0000627" id="R_EX_acon_C_e" name="R_EX_acon_C_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138749,6 +147675,16 @@
           <speciesReference species="M_amp_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_anhgm_e" sboTerm="SBO:0000627" id="R_EX_anhgm_e" name="R_EX_anhgm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_anhgm_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_arab__L_e" sboTerm="SBO:0000627" id="R_EX_arab__L_e" name="R_EX_arab__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138789,6 +147725,16 @@
           <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ascb__L_e" sboTerm="SBO:0000627" id="R_EX_ascb__L_e" name="R_EX_ascb__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_asn__L_e" sboTerm="SBO:0000627" id="R_EX_asn__L_e" name="R_EX_asn__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138879,16 +147825,6 @@
           <speciesReference species="M_balamd_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_bhb_e" sboTerm="SBO:0000627" id="R_EX_bhb_e" name="R_EX_bhb_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_bhb_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_but_e" sboTerm="SBO:0000627" id="R_EX_but_e" name="R_EX_but_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138949,44 +147885,44 @@
           <speciesReference species="M_carn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_cgly_e" sboTerm="SBO:0000627" id="R_EX_cgly_e" name="R_EX_cgly_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_cell4_e" sboTerm="SBO:0000627" id="R_EX_cell4_e" name="R_EX_cell4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cell4_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_chol_e" sboTerm="SBO:0000627" id="R_EX_chol_e" name="R_EX_chol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_cgly_e" sboTerm="SBO:0000627" id="R_EX_cgly_e" name="R_EX_cgly_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cgly_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_chols_e" sboTerm="SBO:0000627" id="R_EX_chols_e" name="R_EX_chols_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_chol_e" sboTerm="SBO:0000627" id="R_EX_chol_e" name="R_EX_chol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_chor_e" sboTerm="SBO:0000627" id="R_EX_chor_e" name="R_EX_chor_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_chols_e" sboTerm="SBO:0000627" id="R_EX_chols_e" name="R_EX_chols_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_chor_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_cinnm_e" sboTerm="SBO:0000627" id="R_EX_cinnm_e" name="R_EX_cinnm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -139019,6 +147955,16 @@
           <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_cmcbtt_e" sboTerm="SBO:0000627" id="R_EX_cmcbtt_e" name="R_EX_cmcbtt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cmp_e" sboTerm="SBO:0000627" id="R_EX_cmp_e" name="R_EX_cmp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139039,6 +147985,16 @@
           <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_co_e" sboTerm="SBO:0000627" id="R_EX_co_e" name="R_EX_co_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cobalt2_e" sboTerm="SBO:0000627" id="R_EX_cobalt2_e" name="R_EX_cobalt2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139089,6 +148045,16 @@
           <speciesReference species="M_cu2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_cyan_e" sboTerm="SBO:0000627" id="R_EX_cyan_e" name="R_EX_cyan_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cyan_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cynt_e" sboTerm="SBO:0000627" id="R_EX_cynt_e" name="R_EX_cynt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139109,6 +148075,16 @@
           <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_cytd_e" sboTerm="SBO:0000627" id="R_EX_cytd_e" name="R_EX_cytd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cytd_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_dad_2_e" sboTerm="SBO:0000627" id="R_EX_dad_2_e" name="R_EX_dad_2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139249,6 +148225,16 @@
           <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_fcmcbtt_e" sboTerm="SBO:0000627" id="R_EX_fcmcbtt_e" name="R_EX_fcmcbtt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_fe2_e" sboTerm="SBO:0000627" id="R_EX_fe2_e" name="R_EX_fe2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139279,6 +148265,26 @@
           <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_fe3dhbzs3_e" sboTerm="SBO:0000627" id="R_EX_fe3dhbzs3_e" name="R_EX_fe3dhbzs3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_fe3dhbzs3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_fe3pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_kt_e" name="R_EX_fe3pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_feenter_e" sboTerm="SBO:0000627" id="R_EX_feenter_e" name="R_EX_feenter_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139289,6 +148295,26 @@
           <speciesReference species="M_feenter_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_feoxam_e" sboTerm="SBO:0000627" id="R_EX_feoxam_e" name="R_EX_feoxam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_feoxam_un_e" sboTerm="SBO:0000627" id="R_EX_feoxam_un_e" name="R_EX_feoxam_un_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_feoxam_un_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_fer_e" sboTerm="SBO:0000627" id="R_EX_fer_e" name="R_EX_fer_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139359,6 +148385,16 @@
           <speciesReference species="M_g3pg_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_g3pi_e" sboTerm="SBO:0000627" id="R_EX_g3pi_e" name="R_EX_g3pi_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_g3pi_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_g3ps_e" sboTerm="SBO:0000627" id="R_EX_g3ps_e" name="R_EX_g3ps_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139379,6 +148415,26 @@
           <speciesReference species="M_gal_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_galctn__D_e" sboTerm="SBO:0000627" id="R_EX_galctn__D_e" name="R_EX_galctn__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_galctn__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_galt_e" sboTerm="SBO:0000627" id="R_EX_galt_e" name="R_EX_galt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_galt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_galur_e" sboTerm="SBO:0000627" id="R_EX_galur_e" name="R_EX_galur_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139669,6 +148725,16 @@
           <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_h2s_e" sboTerm="SBO:0000627" id="R_EX_h2s_e" name="R_EX_h2s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_h_e" sboTerm="SBO:0000627" id="R_EX_h_e" name="R_EX_h_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140009,34 +149075,34 @@
           <speciesReference species="M_malthx_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_malttr_e" sboTerm="SBO:0000627" id="R_EX_malttr_e" name="R_EX_malttr_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_man_e" sboTerm="SBO:0000627" id="R_EX_man_e" name="R_EX_man_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_malttr_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_man_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_man_e" sboTerm="SBO:0000627" id="R_EX_man_e" name="R_EX_man_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_manur_e" sboTerm="SBO:0000627" id="R_EX_manur_e" name="R_EX_manur_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_man_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_manur_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_manur_e" sboTerm="SBO:0000627" id="R_EX_manur_e" name="R_EX_manur_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_meoh_e" sboTerm="SBO:0000627" id="R_EX_meoh_e" name="R_EX_meoh_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_manur_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_met__D_e" sboTerm="SBO:0000627" id="R_EX_met__D_e" name="R_EX_met__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -140059,24 +149125,24 @@
           <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_metsox_R__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_R__L_e" name="R_EX_metsox_R__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_metox__R_e" sboTerm="SBO:0000627" id="R_EX_metox__R_e" name="R_EX_metox__R_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_metsox_S__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_S__L_e" name="R_EX_metsox_S__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_metox_e" sboTerm="SBO:0000627" id="R_EX_metox_e" name="R_EX_metox_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_mg2_e" sboTerm="SBO:0000627" id="R_EX_mg2_e" name="R_EX_mg2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -140129,6 +149195,26 @@
           <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_mththf_e" sboTerm="SBO:0000627" id="R_EX_mththf_e" name="R_EX_mththf_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_mththf_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_n2o_e" sboTerm="SBO:0000627" id="R_EX_n2o_e" name="R_EX_n2o_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_n2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_nac_e" sboTerm="SBO:0000627" id="R_EX_nac_e" name="R_EX_nac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140149,6 +149235,16 @@
           <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_nmn_e" sboTerm="SBO:0000627" id="R_EX_nmn_e" name="R_EX_nmn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_nmn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_no2_e" sboTerm="SBO:0000627" id="R_EX_no2_e" name="R_EX_no2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140189,6 +149285,16 @@
           <speciesReference species="M_nona_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_o2_e" sboTerm="SBO:0000627" id="R_EX_o2_e" name="R_EX_o2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_oaa_e" sboTerm="SBO:0000627" id="R_EX_oaa_e" name="R_EX_oaa_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140309,6 +149415,16 @@
           <speciesReference species="M_pea_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_peamn_e" sboTerm="SBO:0000627" id="R_EX_peamn_e" name="R_EX_peamn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_peamn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_pentso3_e" sboTerm="SBO:0000627" id="R_EX_pentso3_e" name="R_EX_pentso3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140589,34 +149705,34 @@
           <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_quin_e" sboTerm="SBO:0000627" id="R_EX_quin_e" name="R_EX_quin_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_r5p_e" sboTerm="SBO:0000627" id="R_EX_r5p_e" name="R_EX_r5p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_r5p_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_r5p_e" sboTerm="SBO:0000627" id="R_EX_r5p_e" name="R_EX_r5p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_rib__D_e" sboTerm="SBO:0000627" id="R_EX_rib__D_e" name="R_EX_rib__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_r5p_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_rib__D_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_rib__D_e" sboTerm="SBO:0000627" id="R_EX_rib__D_e" name="R_EX_rib__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_salc_e" sboTerm="SBO:0000627" id="R_EX_salc_e" name="R_EX_salc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_rib__D_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salc_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_salchs2_e" sboTerm="SBO:0000627" id="R_EX_salchs2_e" name="R_EX_salchs2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -140629,6 +149745,16 @@
           <speciesReference species="M_salchs2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_salchs2fe_e" sboTerm="SBO:0000627" id="R_EX_salchs2fe_e" name="R_EX_salchs2fe_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_salchs2fe_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_salchs4fe_e" sboTerm="SBO:0000627" id="R_EX_salchs4fe_e" name="R_EX_salchs4fe_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140639,6 +149765,26 @@
           <speciesReference species="M_salchs4fe_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_salchsx_e" sboTerm="SBO:0000627" id="R_EX_salchsx_e" name="R_EX_salchsx_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_salchsx_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_sbt__D_e" sboTerm="SBO:0000627" id="R_EX_sbt__D_e" name="R_EX_sbt__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_sbt__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_sel_e" sboTerm="SBO:0000627" id="R_EX_sel_e" name="R_EX_sel_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140729,6 +149875,16 @@
           <speciesReference species="M_spmd_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_stfrnA_e" sboTerm="SBO:0000627" id="R_EX_stfrnA_e" name="R_EX_stfrnA_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_stfrnA_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_succ_e" sboTerm="SBO:0000627" id="R_EX_succ_e" name="R_EX_succ_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140779,14 +149935,14 @@
           <speciesReference species="M_taur_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_thm_e" sboTerm="SBO:0000627" id="R_EX_thm_e" name="R_EX_thm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_tcynt_e" sboTerm="SBO:0000627" id="R_EX_tcynt_e" name="R_EX_tcynt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_thm_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_thr__L_e" sboTerm="SBO:0000627" id="R_EX_thr__L_e" name="R_EX_thr__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -140849,6 +150005,16 @@
           <speciesReference species="M_tol_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_tre6p_e" sboTerm="SBO:0000627" id="R_EX_tre6p_e" name="R_EX_tre6p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_tre6p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_tre_e" sboTerm="SBO:0000627" id="R_EX_tre_e" name="R_EX_tre_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140999,6 +150165,16 @@
           <speciesReference species="M_vanlt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_xan_e" sboTerm="SBO:0000627" id="R_EX_xan_e" name="R_EX_xan_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_xtsn_e" sboTerm="SBO:0000627" id="R_EX_xtsn_e" name="R_EX_xtsn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141159,35 +150335,37 @@
           <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_O2t" sboTerm="SBO:0000185" id="R_O2t" name="O2 transport  diffusion " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHAD1" sboTerm="SBO:0000176" id="R_DHAD1" name="Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
             <p>GAP_FILL: M9[succ]</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2t">
+            <rdf:Description rdf:about="#R_DHAD1">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05468"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/24812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYISOVALDEHYDRAT-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04441"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_23dhmb_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3mob_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PHPYROX" sboTerm="SBO:0000176" id="R_PHPYROX" name="Phenylpyruvate oxidation chemical " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -141216,17 +150394,6 @@
           <speciesReference species="M_oxa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_EX_o2_e" sboTerm="SBO:0000627" id="R_EX_o2_e" name="R_EX_o2_e" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-            <p>GAP_FILL: M9[succ]</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
     </listOfReactions>
     <fbc:listOfObjectives fbc:activeObjective="objective">
       <fbc:objective fbc:id="objective" fbc:type="maximize">
@@ -141262,6 +150429,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_spontaneous" sboTerm="SBO:0000243" fbc:id="G_spontaneous" fbc:name="G_spontaneous" fbc:label="G_spontaneous">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1252" sboTerm="SBO:0000243" fbc:id="G_PA1252" fbc:name="G_PA1252" fbc:label="G_PA1252">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141358,6 +150532,44 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4188" sboTerm="SBO:0000243" fbc:id="G_PA4188" fbc:name="G_PA4188" fbc:label="G_PA4188">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4188">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q17ZX0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q17ZX0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181M9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181M9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000921"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944925"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12550"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2261" sboTerm="SBO:0000243" fbc:id="G_PA2261" fbc:name="G_PA2261" fbc:label="G_PA2261">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141566,14 +150778,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3692" sboTerm="SBO:0000243" fbc:id="G_PA3692" fbc:name="G_PA3692" fbc:label="G_PA3692">
+      <fbc:geneProduct metaid="G_PA2900" sboTerm="SBO:0000243" fbc:id="G_PA2900" fbc:name="G_PA2900" fbc:label="G_PA2900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2900" sboTerm="SBO:0000243" fbc:id="G_PA2900" fbc:name="G_PA2900" fbc:label="G_PA2900">
+      <fbc:geneProduct metaid="G_PA3692" sboTerm="SBO:0000243" fbc:id="G_PA3692" fbc:name="G_PA3692" fbc:label="G_PA3692">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141604,31 +150816,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1828" sboTerm="SBO:0000243" fbc:id="G_PA1828" fbc:name="G_PA1828" fbc:label="G_PA1828">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1828">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18B45"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18B45"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885331"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4389" sboTerm="SBO:0000243" fbc:id="G_PA4389" fbc:name="G_PA4389" fbc:label="G_PA4389">
+      <fbc:geneProduct metaid="G_PA2967" sboTerm="SBO:0000243" fbc:id="G_PA2967" fbc:name="G_PA2967" fbc:label="G_PA2967">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141636,10 +150824,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4389">
+            <rdf:Description rdf:about="#G_PA2967">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEK2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11318"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141675,7 +150868,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2967" sboTerm="SBO:0000243" fbc:id="G_PA2967" fbc:name="G_PA2967" fbc:label="G_PA2967">
+      <fbc:geneProduct metaid="G_PA1828" sboTerm="SBO:0000243" fbc:id="G_PA1828" fbc:name="G_PA1828" fbc:label="G_PA1828">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141683,15 +150876,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2967">
+            <rdf:Description rdf:about="#G_PA1828">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043163"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043163"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003700"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEK2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945645"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18B45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18B45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885331"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141720,7 +150914,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0228" sboTerm="SBO:0000243" fbc:id="G_PA0228" fbc:name="G_PA0228" fbc:label="G_PA0228">
+      <fbc:geneProduct metaid="G_PA4389" sboTerm="SBO:0000243" fbc:id="G_PA4389" fbc:name="G_PA4389" fbc:label="G_PA4389">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141728,11 +150922,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0228">
+            <rdf:Description rdf:about="#G_PA4389">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041755"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897230"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141768,7 +150961,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0229" sboTerm="SBO:0000243" fbc:id="G_PA0229" fbc:name="G_PA0229" fbc:label="G_PA0229">
+      <fbc:geneProduct metaid="G_PA0228" sboTerm="SBO:0000243" fbc:id="G_PA0228" fbc:name="G_PA0228" fbc:label="G_PA0228">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141776,18 +150969,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0229">
+            <rdf:Description rdf:about="#G_PA0228">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043906"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041755"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1807" sboTerm="SBO:0000243" fbc:id="G_PA1807" fbc:name="G_PA1807" fbc:label="G_PA1807">
+      <fbc:geneProduct metaid="G_PA0229" sboTerm="SBO:0000243" fbc:id="G_PA0229" fbc:name="G_PA0229" fbc:label="G_PA0229">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141795,11 +150988,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1807">
+            <rdf:Description rdf:about="#G_PA0229">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042321"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043906"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141827,7 +151020,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1810" sboTerm="SBO:0000243" fbc:id="G_PA1810" fbc:name="G_PA1810" fbc:label="G_PA1810">
+      <fbc:geneProduct metaid="G_PA1807" sboTerm="SBO:0000243" fbc:id="G_PA1807" fbc:name="G_PA1807" fbc:label="G_PA1807">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141835,11 +151028,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1810">
+            <rdf:Description rdf:about="#G_PA1807">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042316"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042321"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042321"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1808" sboTerm="SBO:0000243" fbc:id="G_PA1808" fbc:name="G_PA1808" fbc:label="G_PA1808">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1808">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042308"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141865,7 +151077,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1808" sboTerm="SBO:0000243" fbc:id="G_PA1808" fbc:name="G_PA1808" fbc:label="G_PA1808">
+      <fbc:geneProduct metaid="G_PA1810" sboTerm="SBO:0000243" fbc:id="G_PA1810" fbc:name="G_PA1810" fbc:label="G_PA1810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141873,11 +151085,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1808">
+            <rdf:Description rdf:about="#G_PA1810">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042308"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042316"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141993,7 +151205,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3304" sboTerm="SBO:0000243" fbc:id="G_PA3304" fbc:name="G_PA3304" fbc:label="G_PA3304">
+      <fbc:geneProduct metaid="G_PA3305" sboTerm="SBO:0000243" fbc:id="G_PA3305" fbc:name="G_PA3305" fbc:label="G_PA3305">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142001,20 +151213,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3304">
+            <rdf:Description rdf:about="#G_PA3305">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010631"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46482"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46481"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12822"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3305" sboTerm="SBO:0000243" fbc:id="G_PA3305" fbc:name="G_PA3305" fbc:label="G_PA3305">
+      <fbc:geneProduct metaid="G_PA3304" sboTerm="SBO:0000243" fbc:id="G_PA3304" fbc:name="G_PA3304" fbc:label="G_PA3304">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142022,13 +151234,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3305">
+            <rdf:Description rdf:about="#G_PA3304">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010629"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12823"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142072,25 +151284,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0220" sboTerm="SBO:0000243" fbc:id="G_PA0220" fbc:name="G_PA0220" fbc:label="G_PA0220">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0220">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045792"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045792"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1268" sboTerm="SBO:0000243" fbc:id="G_PA1268" fbc:name="G_PA1268" fbc:label="G_PA1268">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142153,6 +151346,44 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4079" sboTerm="SBO:0000243" fbc:id="G_PA4079" fbc:name="G_PA4079" fbc:label="G_PA4079">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4079">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042655"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3235" sboTerm="SBO:0000243" fbc:id="G_PA3235" fbc:name="G_PA3235" fbc:label="G_PA3235">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3235">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042673"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042673"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5198" sboTerm="SBO:0000243" fbc:id="G_PA5198" fbc:name="G_PA5198" fbc:label="G_PA5198">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142193,7 +151424,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1072" sboTerm="SBO:0000243" fbc:id="G_PA1072" fbc:name="G_PA1072" fbc:label="G_PA1072">
+      <fbc:geneProduct metaid="G_PA1074" sboTerm="SBO:0000243" fbc:id="G_PA1074" fbc:name="G_PA1074" fbc:label="G_PA1074">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142201,18 +151432,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1072">
+            <rdf:Description rdf:about="#G_PA1074">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045445"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1071" sboTerm="SBO:0000243" fbc:id="G_PA1071" fbc:name="G_PA1071" fbc:label="G_PA1071">
+      <fbc:geneProduct metaid="G_PA1072" sboTerm="SBO:0000243" fbc:id="G_PA1072" fbc:name="G_PA1072" fbc:label="G_PA1072">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142220,18 +151451,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1071">
+            <rdf:Description rdf:about="#G_PA1072">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045255"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1074" sboTerm="SBO:0000243" fbc:id="G_PA1074" fbc:name="G_PA1074" fbc:label="G_PA1074">
+      <fbc:geneProduct metaid="G_PA1070" sboTerm="SBO:0000243" fbc:id="G_PA1070" fbc:name="G_PA1070" fbc:label="G_PA1070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142239,18 +151470,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1074">
+            <rdf:Description rdf:about="#G_PA1070">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045445"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045466"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1070" sboTerm="SBO:0000243" fbc:id="G_PA1070" fbc:name="G_PA1070" fbc:label="G_PA1070">
+      <fbc:geneProduct metaid="G_PA1071" sboTerm="SBO:0000243" fbc:id="G_PA1071" fbc:name="G_PA1071" fbc:label="G_PA1071">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142258,11 +151489,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1070">
+            <rdf:Description rdf:about="#G_PA1071">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045466"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045264"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045264"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142326,7 +151557,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2192" sboTerm="SBO:0000243" fbc:id="G_PA2192" fbc:name="G_PA2192" fbc:label="G_PA2192">
+      <fbc:geneProduct metaid="G_PA3328" sboTerm="SBO:0000243" fbc:id="G_PA3328" fbc:name="G_PA3328" fbc:label="G_PA3328">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142334,11 +151565,49 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2192">
+            <rdf:Description rdf:about="#G_PA3328">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043296"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043296"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046621"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4126" sboTerm="SBO:0000243" fbc:id="G_PA4126" fbc:name="G_PA4126" fbc:label="G_PA4126">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4126">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046625"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2213" sboTerm="SBO:0000243" fbc:id="G_PA2213" fbc:name="G_PA2213" fbc:label="G_PA2213">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2213">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046626"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142364,6 +151633,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2192" sboTerm="SBO:0000243" fbc:id="G_PA2192" fbc:name="G_PA2192" fbc:label="G_PA2192">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2192">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043296"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043296"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1997" sboTerm="SBO:0000243" fbc:id="G_PA1997" fbc:name="G_PA1997" fbc:label="G_PA1997">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142550,7 +151838,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5312" sboTerm="SBO:0000243" fbc:id="G_PA5312" fbc:name="G_PA5312" fbc:label="G_PA5312">
+      <fbc:geneProduct metaid="G_PA4899" sboTerm="SBO:0000243" fbc:id="G_PA4899" fbc:name="G_PA4899" fbc:label="G_PA4899">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142558,18 +151846,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5312">
+            <rdf:Description rdf:about="#G_PA4899">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042265"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/pdb/4DNG"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P94358"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4899" sboTerm="SBO:0000243" fbc:id="G_PA4899" fbc:name="G_PA4899" fbc:label="G_PA4899">
+      <fbc:geneProduct metaid="G_PA5312" sboTerm="SBO:0000243" fbc:id="G_PA5312" fbc:name="G_PA5312" fbc:label="G_PA5312">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142577,17 +151871,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4899">
+            <rdf:Description rdf:about="#G_PA5312">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015590"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016161"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016162"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016163"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029510"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11903"/>
-                  <rdf:li rdf:resource="http://identifiers.org/pdb/4DNG"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P94358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042265"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142705,14 +151993,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3925" sboTerm="SBO:0000243" fbc:id="G_PA3925" fbc:name="G_PA3925" fbc:label="G_PA3925">
+      <fbc:geneProduct metaid="G_PA1016" sboTerm="SBO:0000243" fbc:id="G_PA1016" fbc:name="G_PA1016" fbc:label="G_PA1016">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1736" sboTerm="SBO:0000243" fbc:id="G_PA1736" fbc:name="G_PA1736" fbc:label="G_PA1736">
+      <fbc:geneProduct metaid="G_PA3589" sboTerm="SBO:0000243" fbc:id="G_PA3589" fbc:name="G_PA3589" fbc:label="G_PA3589">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3454" sboTerm="SBO:0000243" fbc:id="G_PA3454" fbc:name="G_PA3454" fbc:label="G_PA3454">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142720,17 +152015,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1736">
+            <rdf:Description rdf:about="#G_PA3454">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32177"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2001" sboTerm="SBO:0000243" fbc:id="G_PA2001" fbc:name="G_PA2001" fbc:label="G_PA2001">
+      <fbc:geneProduct metaid="G_PA1736" sboTerm="SBO:0000243" fbc:id="G_PA1736" fbc:name="G_PA1736" fbc:label="G_PA1736">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142738,32 +152044,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2001">
+            <rdf:Description rdf:about="#G_PA1736">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885774"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1016" sboTerm="SBO:0000243" fbc:id="G_PA1016" fbc:name="G_PA1016" fbc:label="G_PA1016">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3589" sboTerm="SBO:0000243" fbc:id="G_PA3589" fbc:name="G_PA3589" fbc:label="G_PA3589">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3454" sboTerm="SBO:0000243" fbc:id="G_PA3454" fbc:name="G_PA3454" fbc:label="G_PA3454">
+      <fbc:geneProduct metaid="G_PA2001" sboTerm="SBO:0000243" fbc:id="G_PA2001" fbc:name="G_PA2001" fbc:label="G_PA2001">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142771,27 +152062,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3454">
+            <rdf:Description rdf:about="#G_PA2001">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002155"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020610"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020613"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020616"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042451"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3925" sboTerm="SBO:0000243" fbc:id="G_PA3925" fbc:name="G_PA3925" fbc:label="G_PA3925">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2002" sboTerm="SBO:0000243" fbc:id="G_PA2002" fbc:name="G_PA2002" fbc:label="G_PA2002">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142874,7 +152162,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4847" sboTerm="SBO:0000243" fbc:id="G_PA4847" fbc:name="G_PA4847" fbc:label="G_PA4847">
+      <fbc:geneProduct metaid="G_PA3112" sboTerm="SBO:0000243" fbc:id="G_PA3112" fbc:name="G_PA3112" fbc:label="G_PA3112">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142882,21 +152170,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4847">
+            <rdf:Description rdf:about="#G_PA3112">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947758"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10275"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001249"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAZ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043023"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142929,7 +152207,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3112" sboTerm="SBO:0000243" fbc:id="G_PA3112" fbc:name="G_PA3112" fbc:label="G_PA3112">
+      <fbc:geneProduct metaid="G_PA4847" sboTerm="SBO:0000243" fbc:id="G_PA4847" fbc:name="G_PA4847" fbc:label="G_PA4847">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142937,11 +152215,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3112">
+            <rdf:Description rdf:about="#G_PA4847">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAZ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176480"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143076,6 +152364,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4695" sboTerm="SBO:0000243" fbc:id="G_PA4695" fbc:name="G_PA4695" fbc:label="G_PA4695">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4695">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044684"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2035" sboTerm="SBO:0000243" fbc:id="G_PA2035" fbc:name="G_PA2035" fbc:label="G_PA2035">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143110,7 +152417,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4695" sboTerm="SBO:0000243" fbc:id="G_PA4695" fbc:name="G_PA4695" fbc:label="G_PA4695">
+      <fbc:geneProduct metaid="G_PA4696" sboTerm="SBO:0000243" fbc:id="G_PA4696" fbc:name="G_PA4696" fbc:label="G_PA4696">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143118,11 +152425,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4695">
+            <rdf:Description rdf:about="#G_PA4696">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044684"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041966"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143136,25 +152443,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4696" sboTerm="SBO:0000243" fbc:id="G_PA4696" fbc:name="G_PA4696" fbc:label="G_PA4696">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4696">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041966"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041966"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0836" sboTerm="SBO:0000243" fbc:id="G_PA0836" fbc:name="G_PA0836" fbc:label="G_PA0836">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143208,6 +152496,37 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4979" sboTerm="SBO:0000243" fbc:id="G_PA4979" fbc:name="G_PA4979" fbc:label="G_PA4979">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4979">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/606885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hprd/06053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/35"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS76610.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS9207.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS19579.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P45867"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1631" sboTerm="SBO:0000243" fbc:id="G_PA1631" fbc:name="G_PA1631" fbc:label="G_PA1631">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143254,37 +152573,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4979" sboTerm="SBO:0000243" fbc:id="G_PA4979" fbc:name="G_PA4979" fbc:label="G_PA4979">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4979">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/606885"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hprd/06053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/35"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS76610.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS9207.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11409"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS19579.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006091"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009075"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009100"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11239"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P45867"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2597" sboTerm="SBO:0000243" fbc:id="G_PA2597" fbc:name="G_PA2597" fbc:label="G_PA2597">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143347,6 +152635,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2346" sboTerm="SBO:0000243" fbc:id="G_PA2346" fbc:name="G_PA2346" fbc:label="G_PA2346">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2552" sboTerm="SBO:0000243" fbc:id="G_PA2552" fbc:name="G_PA2552" fbc:label="G_PA2552">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143366,13 +152661,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2346" sboTerm="SBO:0000243" fbc:id="G_PA2346" fbc:name="G_PA2346" fbc:label="G_PA2346">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5020" sboTerm="SBO:0000243" fbc:id="G_PA5020" fbc:name="G_PA5020" fbc:label="G_PA5020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143418,6 +152706,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4994" sboTerm="SBO:0000243" fbc:id="G_PA4994" fbc:name="G_PA4994" fbc:label="G_PA4994">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1535" sboTerm="SBO:0000243" fbc:id="G_PA1535" fbc:name="G_PA1535" fbc:label="G_PA1535">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143436,12 +152731,24 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4994" sboTerm="SBO:0000243" fbc:id="G_PA4994" fbc:name="G_PA4994" fbc:label="G_PA4994">
+      <fbc:geneProduct metaid="G_PA4402" sboTerm="SBO:0000243" fbc:id="G_PA4402" fbc:name="G_PA4402" fbc:label="G_PA4402">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4402">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046524"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5206" sboTerm="SBO:0000243" fbc:id="G_PA5206" fbc:name="G_PA5206" fbc:label="G_PA5206">
         <notes>
@@ -143462,6 +152769,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2922" sboTerm="SBO:0000243" fbc:id="G_PA2922" fbc:name="G_PA2922" fbc:label="G_PA2922">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5390" sboTerm="SBO:0000243" fbc:id="G_PA5390" fbc:name="G_PA5390" fbc:label="G_PA5390">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143469,7 +152783,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4402" sboTerm="SBO:0000243" fbc:id="G_PA4402" fbc:name="G_PA4402" fbc:label="G_PA4402">
+      <fbc:geneProduct metaid="G_PA0753" sboTerm="SBO:0000243" fbc:id="G_PA0753" fbc:name="G_PA0753" fbc:label="G_PA0753">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143477,24 +152791,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4402">
+            <rdf:Description rdf:about="#G_PA0753">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045878"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2922" sboTerm="SBO:0000243" fbc:id="G_PA2922" fbc:name="G_PA2922" fbc:label="G_PA2922">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0754" sboTerm="SBO:0000243" fbc:id="G_PA0754" fbc:name="G_PA0754" fbc:label="G_PA0754">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143533,25 +152840,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0753" sboTerm="SBO:0000243" fbc:id="G_PA0753" fbc:name="G_PA0753" fbc:label="G_PA0753">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0753">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045878"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0755" sboTerm="SBO:0000243" fbc:id="G_PA0755" fbc:name="G_PA0755" fbc:label="G_PA0755">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143802,7 +153090,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0887" sboTerm="SBO:0000243" fbc:id="G_PA0887" fbc:name="G_PA0887" fbc:label="G_PA0887">
+      <fbc:geneProduct metaid="G_PA4733" sboTerm="SBO:0000243" fbc:id="G_PA4733" fbc:name="G_PA4733" fbc:label="G_PA4733">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143810,18 +153098,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0887">
+            <rdf:Description rdf:about="#G_PA4733">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042436"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041843"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1017" sboTerm="SBO:0000243" fbc:id="G_PA1017" fbc:name="G_PA1017" fbc:label="G_PA1017">
+      <fbc:geneProduct metaid="G_PA0887" sboTerm="SBO:0000243" fbc:id="G_PA0887" fbc:name="G_PA0887" fbc:label="G_PA0887">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143829,23 +153117,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1017">
+            <rdf:Description rdf:about="#G_PA0887">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003781"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013816"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016102"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185Y5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185Y5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042436"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4733" sboTerm="SBO:0000243" fbc:id="G_PA4733" fbc:name="G_PA4733" fbc:label="G_PA4733">
+      <fbc:geneProduct metaid="G_PA1017" sboTerm="SBO:0000243" fbc:id="G_PA1017" fbc:name="G_PA1017" fbc:label="G_PA1017">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143853,11 +153136,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4733">
+            <rdf:Description rdf:about="#G_PA1017">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185Y5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185Y5"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143906,7 +153194,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3299" sboTerm="SBO:0000243" fbc:id="G_PA3299" fbc:name="G_PA3299" fbc:label="G_PA3299">
+      <fbc:geneProduct metaid="G_PA3300" sboTerm="SBO:0000243" fbc:id="G_PA3300" fbc:name="G_PA3300" fbc:label="G_PA3300">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143914,18 +153202,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3299">
+            <rdf:Description rdf:about="#G_PA3300">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3300" sboTerm="SBO:0000243" fbc:id="G_PA3300" fbc:name="G_PA3300" fbc:label="G_PA3300">
+      <fbc:geneProduct metaid="G_PA3299" sboTerm="SBO:0000243" fbc:id="G_PA3299" fbc:name="G_PA3299" fbc:label="G_PA3299">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143933,11 +153221,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3300">
+            <rdf:Description rdf:about="#G_PA3299">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144001,7 +153289,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1854" sboTerm="SBO:0000243" fbc:id="G_PA1854" fbc:name="G_PA1854" fbc:label="G_PA1854">
+      <fbc:geneProduct metaid="G_PA4150" sboTerm="SBO:0000243" fbc:id="G_PA4150" fbc:name="G_PA4150" fbc:label="G_PA4150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144009,19 +153297,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1854">
+            <rdf:Description rdf:about="#G_PA4150">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044342"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4150" sboTerm="SBO:0000243" fbc:id="G_PA4150" fbc:name="G_PA4150" fbc:label="G_PA4150">
+      <fbc:geneProduct metaid="G_PA4152" sboTerm="SBO:0000243" fbc:id="G_PA4152" fbc:name="G_PA4152" fbc:label="G_PA4152">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144029,18 +153316,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4150">
+            <rdf:Description rdf:about="#G_PA4152">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044342"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
                 </rdf:Bag>
               </bqbiol:is>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4151" sboTerm="SBO:0000243" fbc:id="G_PA4151" fbc:name="G_PA4151" fbc:label="G_PA4151">
+      <fbc:geneProduct metaid="G_PA4149" sboTerm="SBO:0000243" fbc:id="G_PA4149" fbc:name="G_PA4149" fbc:label="G_PA4149">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144048,18 +153335,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4151">
+            <rdf:Description rdf:about="#G_PA4149">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044340"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044343"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4152" sboTerm="SBO:0000243" fbc:id="G_PA4152" fbc:name="G_PA4152" fbc:label="G_PA4152">
+      <fbc:geneProduct metaid="G_PA1854" sboTerm="SBO:0000243" fbc:id="G_PA1854" fbc:name="G_PA1854" fbc:label="G_PA1854">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144067,18 +153354,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4152">
+            <rdf:Description rdf:about="#G_PA1854">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044339"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39066"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4149" sboTerm="SBO:0000243" fbc:id="G_PA4149" fbc:name="G_PA4149" fbc:label="G_PA4149">
+      <fbc:geneProduct metaid="G_PA4151" sboTerm="SBO:0000243" fbc:id="G_PA4151" fbc:name="G_PA4151" fbc:label="G_PA4151">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144086,11 +153374,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4149">
+            <rdf:Description rdf:about="#G_PA4151">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044343"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044340"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144343,7 +153631,7 @@
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0654" sboTerm="SBO:0000243" fbc:id="G_PA0654" fbc:name="G_PA0654" fbc:label="G_PA0654">
+      <fbc:geneProduct metaid="G_PA4773" sboTerm="SBO:0000243" fbc:id="G_PA4773" fbc:name="G_PA4773" fbc:label="G_PA4773">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144351,24 +153639,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0654">
+            <rdf:Description rdf:about="#G_PA4773">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A7F6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947719"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10962"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003826"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBN4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897764"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4773" sboTerm="SBO:0000243" fbc:id="G_PA4773" fbc:name="G_PA4773" fbc:label="G_PA4773">
+      <fbc:geneProduct metaid="G_PA0654" sboTerm="SBO:0000243" fbc:id="G_PA0654" fbc:name="G_PA0654" fbc:label="G_PA0654">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144376,17 +153657,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4773">
+            <rdf:Description rdf:about="#G_PA0654">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A7F6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947719"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBN4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176229"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5272" sboTerm="SBO:0000243" fbc:id="G_PA5272" fbc:name="G_PA5272" fbc:label="G_PA5272">
+      <fbc:geneProduct metaid="G_PA3604" sboTerm="SBO:0000243" fbc:id="G_PA3604" fbc:name="G_PA3604" fbc:label="G_PA3604">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144394,18 +153682,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5272">
+            <rdf:Description rdf:about="#G_PA3604">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886030"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3604" sboTerm="SBO:0000243" fbc:id="G_PA3604" fbc:name="G_PA3604" fbc:label="G_PA3604">
+      <fbc:geneProduct metaid="G_PA5272" sboTerm="SBO:0000243" fbc:id="G_PA5272" fbc:name="G_PA5272" fbc:label="G_PA5272">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144413,10 +153700,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3604">
+            <rdf:Description rdf:about="#G_PA5272">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042392"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144470,7 +153758,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0234" sboTerm="SBO:0000243" fbc:id="G_PA0234" fbc:name="G_PA0234" fbc:label="G_PA0234">
+      <fbc:geneProduct metaid="G_PA0165" sboTerm="SBO:0000243" fbc:id="G_PA0165" fbc:name="G_PA0165" fbc:label="G_PA0165">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144478,18 +153766,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0234">
+            <rdf:Description rdf:about="#G_PA0165">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044649"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041773"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0165" sboTerm="SBO:0000243" fbc:id="G_PA0165" fbc:name="G_PA0165" fbc:label="G_PA0165">
+      <fbc:geneProduct metaid="G_PA0234" sboTerm="SBO:0000243" fbc:id="G_PA0234" fbc:name="G_PA0234" fbc:label="G_PA0234">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144497,32 +153785,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0165">
+            <rdf:Description rdf:about="#G_PA0234">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044649"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0990" sboTerm="SBO:0000243" fbc:id="G_PA0990" fbc:name="G_PA0990" fbc:label="G_PA0990">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2769" sboTerm="SBO:0000243" fbc:id="G_PA2769" fbc:name="G_PA2769" fbc:label="G_PA2769">
+      <fbc:geneProduct metaid="G_PA1278" sboTerm="SBO:0000243" fbc:id="G_PA1278" fbc:name="G_PA1278" fbc:label="G_PA1278">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1278">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044040"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4971" sboTerm="SBO:0000243" fbc:id="G_PA4971" fbc:name="G_PA4971" fbc:label="G_PA4971">
+      <fbc:geneProduct metaid="G_PA5176" sboTerm="SBO:0000243" fbc:id="G_PA5176" fbc:name="G_PA5176" fbc:label="G_PA5176">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144530,11 +153823,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4971">
+            <rdf:Description rdf:about="#G_PA5176">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041588"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043844"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144548,7 +153841,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5176" sboTerm="SBO:0000243" fbc:id="G_PA5176" fbc:name="G_PA5176" fbc:label="G_PA5176">
+      <fbc:geneProduct metaid="G_PA2769" sboTerm="SBO:0000243" fbc:id="G_PA2769" fbc:name="G_PA2769" fbc:label="G_PA2769">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4971" sboTerm="SBO:0000243" fbc:id="G_PA4971" fbc:name="G_PA4971" fbc:label="G_PA4971">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144556,17 +153856,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5176">
+            <rdf:Description rdf:about="#G_PA4971">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043844"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041588"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0990" sboTerm="SBO:0000243" fbc:id="G_PA0990" fbc:name="G_PA0990" fbc:label="G_PA0990">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1543" sboTerm="SBO:0000243" fbc:id="G_PA1543" fbc:name="G_PA1543" fbc:label="G_PA1543">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144624,7 +153931,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4061" sboTerm="SBO:0000243" fbc:id="G_PA4061" fbc:name="G_PA4061" fbc:label="G_PA4061">
+      <fbc:geneProduct metaid="G_PA5240" sboTerm="SBO:0000243" fbc:id="G_PA5240" fbc:name="G_PA5240" fbc:label="G_PA5240">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144632,18 +153939,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4061">
+            <rdf:Description rdf:about="#G_PA5240">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKZ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176707"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1756" sboTerm="SBO:0000243" fbc:id="G_PA1756" fbc:name="G_PA1756" fbc:label="G_PA1756">
+      <fbc:geneProduct metaid="G_PA4061" sboTerm="SBO:0000243" fbc:id="G_PA4061" fbc:name="G_PA4061" fbc:label="G_PA4061">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144651,18 +153969,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1756">
+            <rdf:Description rdf:about="#G_PA4061">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044284"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5240" sboTerm="SBO:0000243" fbc:id="G_PA5240" fbc:name="G_PA5240" fbc:label="G_PA5240">
+      <fbc:geneProduct metaid="G_PA1756" sboTerm="SBO:0000243" fbc:id="G_PA1756" fbc:name="G_PA1756" fbc:label="G_PA1756">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144670,22 +153988,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5240">
+            <rdf:Description rdf:about="#G_PA1756">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042429"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042429"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012357"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA25"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948289"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012335"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013766"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKZ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045322"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144739,6 +154046,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3517" sboTerm="SBO:0000243" fbc:id="G_PA3517" fbc:name="G_PA3517" fbc:label="G_PA3517">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2629" sboTerm="SBO:0000243" fbc:id="G_PA2629" fbc:name="G_PA2629" fbc:label="G_PA2629">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144758,13 +154072,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3517" sboTerm="SBO:0000243" fbc:id="G_PA3517" fbc:name="G_PA3517" fbc:label="G_PA3517">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4938" sboTerm="SBO:0000243" fbc:id="G_PA4938" fbc:name="G_PA4938" fbc:label="G_PA4938">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144803,7 +154110,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3314" sboTerm="SBO:0000243" fbc:id="G_PA3314" fbc:name="G_PA3314" fbc:label="G_PA3314">
+      <fbc:geneProduct metaid="G_PA3313" sboTerm="SBO:0000243" fbc:id="G_PA3313" fbc:name="G_PA3313" fbc:label="G_PA3313">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144811,18 +154118,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3314">
+            <rdf:Description rdf:about="#G_PA3313">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044681"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044680"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3316" sboTerm="SBO:0000243" fbc:id="G_PA3316" fbc:name="G_PA3316" fbc:label="G_PA3316">
+      <fbc:geneProduct metaid="G_PA3250" sboTerm="SBO:0000243" fbc:id="G_PA3250" fbc:name="G_PA3250" fbc:label="G_PA3250">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3314" sboTerm="SBO:0000243" fbc:id="G_PA3314" fbc:name="G_PA3314" fbc:label="G_PA3314">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144830,18 +154144,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3316">
+            <rdf:Description rdf:about="#G_PA3314">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044681"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3315" sboTerm="SBO:0000243" fbc:id="G_PA3315" fbc:name="G_PA3315" fbc:label="G_PA3315">
+      <fbc:geneProduct metaid="G_PA3316" sboTerm="SBO:0000243" fbc:id="G_PA3316" fbc:name="G_PA3316" fbc:label="G_PA3316">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144849,18 +154163,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3315">
+            <rdf:Description rdf:about="#G_PA3316">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044682"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044683"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3313" sboTerm="SBO:0000243" fbc:id="G_PA3313" fbc:name="G_PA3313" fbc:label="G_PA3313">
+      <fbc:geneProduct metaid="G_PA3315" sboTerm="SBO:0000243" fbc:id="G_PA3315" fbc:name="G_PA3315" fbc:label="G_PA3315">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144868,24 +154182,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3313">
+            <rdf:Description rdf:about="#G_PA3315">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044680"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044682"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3250" sboTerm="SBO:0000243" fbc:id="G_PA3250" fbc:name="G_PA3250" fbc:label="G_PA3250">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3758" sboTerm="SBO:0000243" fbc:id="G_PA3758" fbc:name="G_PA3758" fbc:label="G_PA3758">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144923,7 +154230,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4947" sboTerm="SBO:0000243" fbc:id="G_PA4947" fbc:name="G_PA4947" fbc:label="G_PA4947">
+      <fbc:geneProduct metaid="G_PA0807" sboTerm="SBO:0000243" fbc:id="G_PA0807" fbc:name="G_PA0807" fbc:label="G_PA0807">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144931,18 +154238,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4947">
+            <rdf:Description rdf:about="#G_PA0807">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046070"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13687"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0807" sboTerm="SBO:0000243" fbc:id="G_PA0807" fbc:name="G_PA0807" fbc:label="G_PA0807">
+      <fbc:geneProduct metaid="G_PA4947" sboTerm="SBO:0000243" fbc:id="G_PA4947" fbc:name="G_PA4947" fbc:label="G_PA4947">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144950,13 +154259,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0807">
+            <rdf:Description rdf:about="#G_PA4947">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75820"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945494"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046070"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145039,7 +154346,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1498" sboTerm="SBO:0000243" fbc:id="G_PA1498" fbc:name="G_PA1498" fbc:label="G_PA1498">
+      <fbc:geneProduct metaid="G_PA4329" sboTerm="SBO:0000243" fbc:id="G_PA4329" fbc:name="G_PA4329" fbc:label="G_PA4329">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145047,18 +154354,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1498">
+            <rdf:Description rdf:about="#G_PA4329">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045600"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044034"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4329" sboTerm="SBO:0000243" fbc:id="G_PA4329" fbc:name="G_PA4329" fbc:label="G_PA4329">
+      <fbc:geneProduct metaid="G_PA1498" sboTerm="SBO:0000243" fbc:id="G_PA1498" fbc:name="G_PA1498" fbc:label="G_PA1498">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145066,11 +154373,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4329">
+            <rdf:Description rdf:about="#G_PA1498">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045600"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145147,7 +154454,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5025" sboTerm="SBO:0000243" fbc:id="G_PA5025" fbc:name="G_PA5025" fbc:label="G_PA5025">
+      <fbc:geneProduct metaid="G_PA3107" sboTerm="SBO:0000243" fbc:id="G_PA3107" fbc:name="G_PA3107" fbc:label="G_PA3107">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145155,18 +154462,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5025">
+            <rdf:Description rdf:about="#G_PA3107">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045789"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043012"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3107" sboTerm="SBO:0000243" fbc:id="G_PA3107" fbc:name="G_PA3107" fbc:label="G_PA3107">
+      <fbc:geneProduct metaid="G_PA5025" sboTerm="SBO:0000243" fbc:id="G_PA5025" fbc:name="G_PA5025" fbc:label="G_PA5025">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145174,11 +154481,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3107">
+            <rdf:Description rdf:about="#G_PA5025">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045789"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145263,7 +154570,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1587" sboTerm="SBO:0000243" fbc:id="G_PA1587" fbc:name="G_PA1587" fbc:label="G_PA1587">
+      <fbc:geneProduct metaid="G_PA1586" sboTerm="SBO:0000243" fbc:id="G_PA1586" fbc:name="G_PA1586" fbc:label="G_PA1586">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145271,11 +154578,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1587">
+            <rdf:Description rdf:about="#G_PA1586">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042391"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042391"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042423"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145301,7 +154608,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1586" sboTerm="SBO:0000243" fbc:id="G_PA1586" fbc:name="G_PA1586" fbc:label="G_PA1586">
+      <fbc:geneProduct metaid="G_PA1587" sboTerm="SBO:0000243" fbc:id="G_PA1587" fbc:name="G_PA1587" fbc:label="G_PA1587">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145309,11 +154616,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1586">
+            <rdf:Description rdf:about="#G_PA1587">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042423"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042391"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042391"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145396,7 +154703,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4496" sboTerm="SBO:0000243" fbc:id="G_PA4496" fbc:name="G_PA4496" fbc:label="G_PA4496">
+      <fbc:geneProduct metaid="G_PA4505" sboTerm="SBO:0000243" fbc:id="G_PA4505" fbc:name="G_PA4505" fbc:label="G_PA4505">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145404,18 +154711,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4496">
+            <rdf:Description rdf:about="#G_PA4505">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044770"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044770"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044760"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044760"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4505" sboTerm="SBO:0000243" fbc:id="G_PA4505" fbc:name="G_PA4505" fbc:label="G_PA4505">
+      <fbc:geneProduct metaid="G_PA4496" sboTerm="SBO:0000243" fbc:id="G_PA4496" fbc:name="G_PA4496" fbc:label="G_PA4496">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145423,11 +154730,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4505">
+            <rdf:Description rdf:about="#G_PA4496">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044760"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044760"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044770"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044770"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145512,6 +154819,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5302" sboTerm="SBO:0000243" fbc:id="G_PA5302" fbc:name="G_PA5302" fbc:label="G_PA5302">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA5302">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041674"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4930" sboTerm="SBO:0000243" fbc:id="G_PA4930" fbc:name="G_PA4930" fbc:label="G_PA4930">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145554,7 +154880,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5302" sboTerm="SBO:0000243" fbc:id="G_PA5302" fbc:name="G_PA5302" fbc:label="G_PA5302">
+      <fbc:geneProduct metaid="G_PA2828" sboTerm="SBO:0000243" fbc:id="G_PA2828" fbc:name="G_PA2828" fbc:label="G_PA2828">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145562,18 +154888,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5302">
+            <rdf:Description rdf:about="#G_PA2828">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043224"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4722" sboTerm="SBO:0000243" fbc:id="G_PA4722" fbc:name="G_PA4722" fbc:label="G_PA4722">
+      <fbc:geneProduct metaid="G_PA4715" sboTerm="SBO:0000243" fbc:id="G_PA4715" fbc:name="G_PA4715" fbc:label="G_PA4715">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145581,17 +154907,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4722">
+            <rdf:Description rdf:about="#G_PA4715">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14198"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4715" sboTerm="SBO:0000243" fbc:id="G_PA4715" fbc:name="G_PA4715" fbc:label="G_PA4715">
+      <fbc:geneProduct metaid="G_PA4722" sboTerm="SBO:0000243" fbc:id="G_PA4722" fbc:name="G_PA4722" fbc:label="G_PA4722">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145599,22 +154930,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4715">
+            <rdf:Description rdf:about="#G_PA4722">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044669"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044669"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77434"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888305"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2828" sboTerm="SBO:0000243" fbc:id="G_PA2828" fbc:name="G_PA2828" fbc:label="G_PA2828">
+      <fbc:geneProduct metaid="G_PA5074" sboTerm="SBO:0000243" fbc:id="G_PA5074" fbc:name="G_PA5074" fbc:label="G_PA5074">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145622,11 +154948,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2828">
+            <rdf:Description rdf:about="#G_PA5074">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043224"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q189V0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q189V0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34677"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145662,41 +155004,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5074" sboTerm="SBO:0000243" fbc:id="G_PA5074" fbc:name="G_PA5074" fbc:label="G_PA5074">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5074">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q189V0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q189V0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34677"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3838" sboTerm="SBO:0000243" fbc:id="G_PA3838" fbc:name="G_PA3838" fbc:label="G_PA3838">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145779,27 +155086,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3641" sboTerm="SBO:0000243" fbc:id="G_PA3641" fbc:name="G_PA3641" fbc:label="G_PA3641">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3641">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944745"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11555"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2252" sboTerm="SBO:0000243" fbc:id="G_PA2252" fbc:name="G_PA2252" fbc:label="G_PA2252">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145819,7 +155105,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4022" sboTerm="SBO:0000243" fbc:id="G_PA4022" fbc:name="G_PA4022" fbc:label="G_PA4022">
+      <fbc:geneProduct metaid="G_PA3641" sboTerm="SBO:0000243" fbc:id="G_PA3641" fbc:name="G_PA3641" fbc:label="G_PA3641">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145827,11 +155113,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4022">
+            <rdf:Description rdf:about="#G_PA3641">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044329"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11555"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145864,6 +155152,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4022" sboTerm="SBO:0000243" fbc:id="G_PA4022" fbc:name="G_PA4022" fbc:label="G_PA4022">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4022">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044329"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1833" sboTerm="SBO:0000243" fbc:id="G_PA1833" fbc:name="G_PA1833" fbc:label="G_PA1833">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145941,6 +155248,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2119" sboTerm="SBO:0000243" fbc:id="G_PA2119" fbc:name="G_PA2119" fbc:label="G_PA2119">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2158" sboTerm="SBO:0000243" fbc:id="G_PA2158" fbc:name="G_PA2158" fbc:label="G_PA2158">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145967,13 +155281,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2119" sboTerm="SBO:0000243" fbc:id="G_PA2119" fbc:name="G_PA2119" fbc:label="G_PA2119">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1982" sboTerm="SBO:0000243" fbc:id="G_PA1982" fbc:name="G_PA1982" fbc:label="G_PA1982">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145993,7 +155300,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5421" sboTerm="SBO:0000243" fbc:id="G_PA5421" fbc:name="G_PA5421" fbc:label="G_PA5421">
+      <fbc:geneProduct metaid="G_PA2188" sboTerm="SBO:0000243" fbc:id="G_PA2188" fbc:name="G_PA2188" fbc:label="G_PA2188">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146001,18 +155308,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5421">
+            <rdf:Description rdf:about="#G_PA2188">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046593"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2188" sboTerm="SBO:0000243" fbc:id="G_PA2188" fbc:name="G_PA2188" fbc:label="G_PA2188">
+      <fbc:geneProduct metaid="G_PA5421" sboTerm="SBO:0000243" fbc:id="G_PA5421" fbc:name="G_PA5421" fbc:label="G_PA5421">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146020,11 +155327,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2188">
+            <rdf:Description rdf:about="#G_PA5421">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044027"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146153,7 +155460,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3550" sboTerm="SBO:0000243" fbc:id="G_PA3550" fbc:name="G_PA3550" fbc:label="G_PA3550">
+      <fbc:geneProduct metaid="G_PA3548" sboTerm="SBO:0000243" fbc:id="G_PA3548" fbc:name="G_PA3548" fbc:label="G_PA3548">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146161,18 +155468,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3550">
+            <rdf:Description rdf:about="#G_PA3548">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042485"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3548" sboTerm="SBO:0000243" fbc:id="G_PA3548" fbc:name="G_PA3548" fbc:label="G_PA3548">
+      <fbc:geneProduct metaid="G_PA3549" sboTerm="SBO:0000243" fbc:id="G_PA3549" fbc:name="G_PA3549" fbc:label="G_PA3549">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146180,18 +155487,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3548">
+            <rdf:Description rdf:about="#G_PA3549">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042496"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3549" sboTerm="SBO:0000243" fbc:id="G_PA3549" fbc:name="G_PA3549" fbc:label="G_PA3549">
+      <fbc:geneProduct metaid="G_PA3550" sboTerm="SBO:0000243" fbc:id="G_PA3550" fbc:name="G_PA3550" fbc:label="G_PA3550">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146199,11 +155506,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3549">
+            <rdf:Description rdf:about="#G_PA3550">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042496"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042317"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146350,13 +155657,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4510" sboTerm="SBO:0000243" fbc:id="G_PA4510" fbc:name="G_PA4510" fbc:label="G_PA4510">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0496" sboTerm="SBO:0000243" fbc:id="G_PA0496" fbc:name="G_PA0496" fbc:label="G_PA0496">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146380,7 +155680,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0495" sboTerm="SBO:0000243" fbc:id="G_PA0495" fbc:name="G_PA0495" fbc:label="G_PA0495">
+      <fbc:geneProduct metaid="G_PA4510" sboTerm="SBO:0000243" fbc:id="G_PA4510" fbc:name="G_PA4510" fbc:label="G_PA4510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146410,14 +155710,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4434" sboTerm="SBO:0000243" fbc:id="G_PA4434" fbc:name="G_PA4434" fbc:label="G_PA4434">
+      <fbc:geneProduct metaid="G_PA0495" sboTerm="SBO:0000243" fbc:id="G_PA0495" fbc:name="G_PA0495" fbc:label="G_PA0495">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3277" sboTerm="SBO:0000243" fbc:id="G_PA3277" fbc:name="G_PA3277" fbc:label="G_PA3277">
+      <fbc:geneProduct metaid="G_PA4434" sboTerm="SBO:0000243" fbc:id="G_PA4434" fbc:name="G_PA4434" fbc:label="G_PA4434">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146431,6 +155731,20 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3312" sboTerm="SBO:0000243" fbc:id="G_PA3312" fbc:name="G_PA3312" fbc:label="G_PA3312">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3511" sboTerm="SBO:0000243" fbc:id="G_PA3511" fbc:name="G_PA3511" fbc:label="G_PA3511">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0804" sboTerm="SBO:0000243" fbc:id="G_PA0804" fbc:name="G_PA0804" fbc:label="G_PA0804">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146452,27 +155766,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2414" sboTerm="SBO:0000243" fbc:id="G_PA2414" fbc:name="G_PA2414" fbc:label="G_PA2414">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3511" sboTerm="SBO:0000243" fbc:id="G_PA3511" fbc:name="G_PA3511" fbc:label="G_PA3511">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2887" sboTerm="SBO:0000243" fbc:id="G_PA2887" fbc:name="G_PA2887" fbc:label="G_PA2887">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2918" sboTerm="SBO:0000243" fbc:id="G_PA2918" fbc:name="G_PA2918" fbc:label="G_PA2918">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146501,7 +155794,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3312" sboTerm="SBO:0000243" fbc:id="G_PA3312" fbc:name="G_PA3312" fbc:label="G_PA3312">
+      <fbc:geneProduct metaid="G_PA2887" sboTerm="SBO:0000243" fbc:id="G_PA2887" fbc:name="G_PA2887" fbc:label="G_PA2887">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3277" sboTerm="SBO:0000243" fbc:id="G_PA3277" fbc:name="G_PA3277" fbc:label="G_PA3277">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2414" sboTerm="SBO:0000243" fbc:id="G_PA2414" fbc:name="G_PA2414" fbc:label="G_PA2414">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146609,13 +155916,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3119" sboTerm="SBO:0000243" fbc:id="G_PA3119" fbc:name="G_PA3119" fbc:label="G_PA3119">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0547" sboTerm="SBO:0000243" fbc:id="G_PA0547" fbc:name="G_PA0547" fbc:label="G_PA0547">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146641,6 +155941,20 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5459" sboTerm="SBO:0000243" fbc:id="G_PA5459" fbc:name="G_PA5459" fbc:label="G_PA5459">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3119" sboTerm="SBO:0000243" fbc:id="G_PA3119" fbc:name="G_PA3119" fbc:label="G_PA3119">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4973" sboTerm="SBO:0000243" fbc:id="G_PA4973" fbc:name="G_PA4973" fbc:label="G_PA4973">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146679,7 +155993,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3083" sboTerm="SBO:0000243" fbc:id="G_PA3083" fbc:name="G_PA3083" fbc:label="G_PA3083">
+      <fbc:geneProduct metaid="G_PA3831" sboTerm="SBO:0000243" fbc:id="G_PA3831" fbc:name="G_PA3831" fbc:label="G_PA3831">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146687,18 +156001,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3083">
+            <rdf:Description rdf:about="#G_PA3831">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042924"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044903"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3831" sboTerm="SBO:0000243" fbc:id="G_PA3831" fbc:name="G_PA3831" fbc:label="G_PA3831">
+      <fbc:geneProduct metaid="G_PA3083" sboTerm="SBO:0000243" fbc:id="G_PA3083" fbc:name="G_PA3083" fbc:label="G_PA3083">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146706,11 +156020,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3831">
+            <rdf:Description rdf:about="#G_PA3083">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044903"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042924"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -146792,13 +156106,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2609" sboTerm="SBO:0000243" fbc:id="G_PA2609" fbc:name="G_PA2609" fbc:label="G_PA2609">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0650" sboTerm="SBO:0000243" fbc:id="G_PA0650" fbc:name="G_PA0650" fbc:label="G_PA0650">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146818,24 +156125,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0649" sboTerm="SBO:0000243" fbc:id="G_PA0649" fbc:name="G_PA0649" fbc:label="G_PA0649">
+      <fbc:geneProduct metaid="G_PA2609" sboTerm="SBO:0000243" fbc:id="G_PA2609" fbc:name="G_PA2609" fbc:label="G_PA2609">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0649">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044144"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044144"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1001" sboTerm="SBO:0000243" fbc:id="G_PA1001" fbc:name="G_PA1001" fbc:label="G_PA1001">
         <notes>
@@ -146882,6 +156177,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0649" sboTerm="SBO:0000243" fbc:id="G_PA0649" fbc:name="G_PA0649" fbc:label="G_PA0649">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0649">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044144"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3295" sboTerm="SBO:0000243" fbc:id="G_PA3295" fbc:name="G_PA3295" fbc:label="G_PA3295">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146939,7 +156253,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0426" sboTerm="SBO:0000243" fbc:id="G_PA0426" fbc:name="G_PA0426" fbc:label="G_PA0426">
+      <fbc:geneProduct metaid="G_PA4455" sboTerm="SBO:0000243" fbc:id="G_PA4455" fbc:name="G_PA4455" fbc:label="G_PA4455">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146947,18 +156261,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0426">
+            <rdf:Description rdf:about="#G_PA4455">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4454" sboTerm="SBO:0000243" fbc:id="G_PA4454" fbc:name="G_PA4454" fbc:label="G_PA4454">
+      <fbc:geneProduct metaid="G_PA4456" sboTerm="SBO:0000243" fbc:id="G_PA4456" fbc:name="G_PA4456" fbc:label="G_PA4456">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146966,18 +156280,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4454">
+            <rdf:Description rdf:about="#G_PA4456">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4455" sboTerm="SBO:0000243" fbc:id="G_PA4455" fbc:name="G_PA4455" fbc:label="G_PA4455">
+      <fbc:geneProduct metaid="G_PA0426" sboTerm="SBO:0000243" fbc:id="G_PA0426" fbc:name="G_PA0426" fbc:label="G_PA0426">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146985,18 +156299,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4455">
+            <rdf:Description rdf:about="#G_PA0426">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041744"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0427" sboTerm="SBO:0000243" fbc:id="G_PA0427" fbc:name="G_PA0427" fbc:label="G_PA0427">
+      <fbc:geneProduct metaid="G_PA4454" sboTerm="SBO:0000243" fbc:id="G_PA4454" fbc:name="G_PA4454" fbc:label="G_PA4454">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147004,18 +156318,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0427">
+            <rdf:Description rdf:about="#G_PA4454">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0425" sboTerm="SBO:0000243" fbc:id="G_PA0425" fbc:name="G_PA0425" fbc:label="G_PA0425">
+      <fbc:geneProduct metaid="G_PA0427" sboTerm="SBO:0000243" fbc:id="G_PA0427" fbc:name="G_PA0427" fbc:label="G_PA0427">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147023,18 +156337,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0425">
+            <rdf:Description rdf:about="#G_PA0427">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041923"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4456" sboTerm="SBO:0000243" fbc:id="G_PA4456" fbc:name="G_PA4456" fbc:label="G_PA4456">
+      <fbc:geneProduct metaid="G_PA0425" sboTerm="SBO:0000243" fbc:id="G_PA0425" fbc:name="G_PA0425" fbc:label="G_PA0425">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147042,11 +156356,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4456">
+            <rdf:Description rdf:about="#G_PA0425">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041938"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147211,7 +156525,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2933" sboTerm="SBO:0000243" fbc:id="G_PA2933" fbc:name="G_PA2933" fbc:label="G_PA2933">
+      <fbc:geneProduct metaid="G_PA4113" sboTerm="SBO:0000243" fbc:id="G_PA4113" fbc:name="G_PA4113" fbc:label="G_PA4113">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147219,13 +156533,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2933">
+            <rdf:Description rdf:about="#G_PA4113">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31122"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947218"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147251,7 +156563,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4113" sboTerm="SBO:0000243" fbc:id="G_PA4113" fbc:name="G_PA4113" fbc:label="G_PA4113">
+      <fbc:geneProduct metaid="G_PA2933" sboTerm="SBO:0000243" fbc:id="G_PA2933" fbc:name="G_PA2933" fbc:label="G_PA2933">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147259,11 +156571,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4113">
+            <rdf:Description rdf:about="#G_PA2933">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045555"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11636"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147437,7 +156751,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2923" sboTerm="SBO:0000243" fbc:id="G_PA2923" fbc:name="G_PA2923" fbc:label="G_PA2923">
+      <fbc:geneProduct metaid="G_PA2924" sboTerm="SBO:0000243" fbc:id="G_PA2924" fbc:name="G_PA2924" fbc:label="G_PA2924">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147445,21 +156759,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2923">
+            <rdf:Description rdf:about="#G_PA2924">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEU0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945309"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12124"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10072"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005768"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDB7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJA3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175606"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147491,7 +156801,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0892" sboTerm="SBO:0000243" fbc:id="G_PA0892" fbc:name="G_PA0892" fbc:label="G_PA0892">
+      <fbc:geneProduct metaid="G_PA3858" sboTerm="SBO:0000243" fbc:id="G_PA3858" fbc:name="G_PA3858" fbc:label="G_PA3858">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147499,18 +156809,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0892">
+            <rdf:Description rdf:about="#G_PA3858">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041857"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0888" sboTerm="SBO:0000243" fbc:id="G_PA0888" fbc:name="G_PA0888" fbc:label="G_PA0888">
+      <fbc:geneProduct metaid="G_PA0889" sboTerm="SBO:0000243" fbc:id="G_PA0889" fbc:name="G_PA0889" fbc:label="G_PA0889">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147518,11 +156828,32 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0888">
+            <rdf:Description rdf:about="#G_PA0889">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043399"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043373"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0073" sboTerm="SBO:0000243" fbc:id="G_PA0073" fbc:name="G_PA0073" fbc:label="G_PA0073">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0073">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q74VQ1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174193"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147562,7 +156893,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2926" sboTerm="SBO:0000243" fbc:id="G_PA2926" fbc:name="G_PA2926" fbc:label="G_PA2926">
+      <fbc:geneProduct metaid="G_PA0890" sboTerm="SBO:0000243" fbc:id="G_PA0890" fbc:name="G_PA0890" fbc:label="G_PA0890">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147570,24 +156901,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2926">
+            <rdf:Description rdf:about="#G_PA0890">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007610"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07109"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946789"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJA1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043572"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043572"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4193" sboTerm="SBO:0000243" fbc:id="G_PA4193" fbc:name="G_PA4193" fbc:label="G_PA4193">
+      <fbc:geneProduct metaid="G_PA0892" sboTerm="SBO:0000243" fbc:id="G_PA0892" fbc:name="G_PA0892" fbc:label="G_PA0892">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147595,18 +156920,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4193">
+            <rdf:Description rdf:about="#G_PA0892">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041857"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0073" sboTerm="SBO:0000243" fbc:id="G_PA0073" fbc:name="G_PA0073" fbc:label="G_PA0073">
+      <fbc:geneProduct metaid="G_PA1256" sboTerm="SBO:0000243" fbc:id="G_PA1256" fbc:name="G_PA1256" fbc:label="G_PA1256">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147614,41 +156939,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0073">
+            <rdf:Description rdf:about="#G_PA1256">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P10346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10389"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q74VQ1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174193"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1260" sboTerm="SBO:0000243" fbc:id="G_PA1260" fbc:name="G_PA1260" fbc:label="G_PA1260">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1260">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002927"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948981"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39456"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0890" sboTerm="SBO:0000243" fbc:id="G_PA0890" fbc:name="G_PA0890" fbc:label="G_PA0890">
+      <fbc:geneProduct metaid="G_PA2926" sboTerm="SBO:0000243" fbc:id="G_PA2926" fbc:name="G_PA2926" fbc:label="G_PA2926">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147656,18 +156966,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0890">
+            <rdf:Description rdf:about="#G_PA2926">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043572"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043572"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07109"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJA1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175608"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0889" sboTerm="SBO:0000243" fbc:id="G_PA0889" fbc:name="G_PA0889" fbc:label="G_PA0889">
+      <fbc:geneProduct metaid="G_PA2923" sboTerm="SBO:0000243" fbc:id="G_PA2923" fbc:name="G_PA2923" fbc:label="G_PA2923">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147675,18 +156991,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0889">
+            <rdf:Description rdf:about="#G_PA2923">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043373"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEU0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005768"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDB7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175605"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2924" sboTerm="SBO:0000243" fbc:id="G_PA2924" fbc:name="G_PA2924" fbc:label="G_PA2924">
+      <fbc:geneProduct metaid="G_PA1260" sboTerm="SBO:0000243" fbc:id="G_PA1260" fbc:name="G_PA1260" fbc:label="G_PA1260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147694,24 +157020,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2924">
+            <rdf:Description rdf:about="#G_PA1260">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947235"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJA3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11628"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3858" sboTerm="SBO:0000243" fbc:id="G_PA3858" fbc:name="G_PA3858" fbc:label="G_PA3858">
+      <fbc:geneProduct metaid="G_PA4193" sboTerm="SBO:0000243" fbc:id="G_PA4193" fbc:name="G_PA4193" fbc:label="G_PA4193">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147719,18 +157041,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3858">
+            <rdf:Description rdf:about="#G_PA4193">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044174"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1256" sboTerm="SBO:0000243" fbc:id="G_PA1256" fbc:name="G_PA1256" fbc:label="G_PA1256">
+      <fbc:geneProduct metaid="G_PA0888" sboTerm="SBO:0000243" fbc:id="G_PA0888" fbc:name="G_PA0888" fbc:label="G_PA0888">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147738,19 +157060,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1256">
+            <rdf:Description rdf:about="#G_PA0888">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P10346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945435"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10389"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11185"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043399"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147783,6 +157097,25 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0220" sboTerm="SBO:0000243" fbc:id="G_PA0220" fbc:name="G_PA0220" fbc:label="G_PA0220">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0220">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045792"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4365" sboTerm="SBO:0000243" fbc:id="G_PA4365" fbc:name="G_PA4365" fbc:label="G_PA4365">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147898,13 +157231,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3116" sboTerm="SBO:0000243" fbc:id="G_PA3116" fbc:name="G_PA3116" fbc:label="G_PA3116">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3117" sboTerm="SBO:0000243" fbc:id="G_PA3117" fbc:name="G_PA3117" fbc:label="G_PA3117">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147924,24 +157250,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2253" sboTerm="SBO:0000243" fbc:id="G_PA2253" fbc:name="G_PA2253" fbc:label="G_PA2253">
+      <fbc:geneProduct metaid="G_PA3116" sboTerm="SBO:0000243" fbc:id="G_PA3116" fbc:name="G_PA3116" fbc:label="G_PA3116">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2253">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044267"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1214" sboTerm="SBO:0000243" fbc:id="G_PA1214" fbc:name="G_PA1214" fbc:label="G_PA1214">
         <notes>
@@ -147968,7 +157282,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1337" sboTerm="SBO:0000243" fbc:id="G_PA1337" fbc:name="G_PA1337" fbc:label="G_PA1337">
+      <fbc:geneProduct metaid="G_PA2253" sboTerm="SBO:0000243" fbc:id="G_PA2253" fbc:name="G_PA2253" fbc:label="G_PA2253">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147976,18 +157290,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1337">
+            <rdf:Description rdf:about="#G_PA2253">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045622"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045622"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044267"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2084" sboTerm="SBO:0000243" fbc:id="G_PA2084" fbc:name="G_PA2084" fbc:label="G_PA2084">
+      <fbc:geneProduct metaid="G_PA1337" sboTerm="SBO:0000243" fbc:id="G_PA1337" fbc:name="G_PA1337" fbc:label="G_PA1337">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147995,17 +157309,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2084">
+            <rdf:Description rdf:about="#G_PA1337">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000583"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001962"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006426"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O05272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045622"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045622"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148031,6 +157339,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2084" sboTerm="SBO:0000243" fbc:id="G_PA2084" fbc:name="G_PA2084" fbc:label="G_PA2084">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2084">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR014729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O05272"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2278" sboTerm="SBO:0000243" fbc:id="G_PA2278" fbc:name="G_PA2278" fbc:label="G_PA2278">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148052,7 +157385,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0450" sboTerm="SBO:0000243" fbc:id="G_PA0450" fbc:name="G_PA0450" fbc:label="G_PA0450">
+      <fbc:geneProduct metaid="G_PA4292" sboTerm="SBO:0000243" fbc:id="G_PA4292" fbc:name="G_PA4292" fbc:label="G_PA4292">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148060,18 +157393,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0450">
+            <rdf:Description rdf:about="#G_PA4292">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042215"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041750"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4292" sboTerm="SBO:0000243" fbc:id="G_PA4292" fbc:name="G_PA4292" fbc:label="G_PA4292">
+      <fbc:geneProduct metaid="G_PA0450" sboTerm="SBO:0000243" fbc:id="G_PA0450" fbc:name="G_PA0450" fbc:label="G_PA0450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148079,11 +157412,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4292">
+            <rdf:Description rdf:about="#G_PA0450">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042215"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148130,7 +157463,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0401" sboTerm="SBO:0000243" fbc:id="G_PA0401" fbc:name="G_PA0401" fbc:label="G_PA0401">
+      <fbc:geneProduct metaid="G_PA0402" sboTerm="SBO:0000243" fbc:id="G_PA0402" fbc:name="G_PA0402" fbc:label="G_PA0402">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148138,18 +157471,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0401">
+            <rdf:Description rdf:about="#G_PA0402">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046107"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042990"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0402" sboTerm="SBO:0000243" fbc:id="G_PA0402" fbc:name="G_PA0402" fbc:label="G_PA0402">
+      <fbc:geneProduct metaid="G_PA0401" sboTerm="SBO:0000243" fbc:id="G_PA0401" fbc:name="G_PA0401" fbc:label="G_PA0401">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148157,11 +157490,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0402">
+            <rdf:Description rdf:about="#G_PA0401">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046107"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148246,7 +157579,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2202" sboTerm="SBO:0000243" fbc:id="G_PA2202" fbc:name="G_PA2202" fbc:label="G_PA2202">
+      <fbc:geneProduct metaid="G_PA1341" sboTerm="SBO:0000243" fbc:id="G_PA1341" fbc:name="G_PA1341" fbc:label="G_PA1341">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148254,19 +157587,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2202">
+            <rdf:Description rdf:about="#G_PA1341">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJV0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175442"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044967"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5082" sboTerm="SBO:0000243" fbc:id="G_PA5082" fbc:name="G_PA5082" fbc:label="G_PA5082">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1340" sboTerm="SBO:0000243" fbc:id="G_PA1340" fbc:name="G_PA1340" fbc:label="G_PA1340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148286,7 +157624,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1339" sboTerm="SBO:0000243" fbc:id="G_PA1339" fbc:name="G_PA1339" fbc:label="G_PA1339">
+      <fbc:geneProduct metaid="G_PA1342" sboTerm="SBO:0000243" fbc:id="G_PA1342" fbc:name="G_PA1342" fbc:label="G_PA1342">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148294,18 +157632,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1339">
+            <rdf:Description rdf:about="#G_PA1342">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044717"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044717"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044664"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1341" sboTerm="SBO:0000243" fbc:id="G_PA1341" fbc:name="G_PA1341" fbc:label="G_PA1341">
+      <fbc:geneProduct metaid="G_PA2202" sboTerm="SBO:0000243" fbc:id="G_PA2202" fbc:name="G_PA2202" fbc:label="G_PA2202">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148313,18 +157651,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1341">
+            <rdf:Description rdf:about="#G_PA2202">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJV0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175442"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1342" sboTerm="SBO:0000243" fbc:id="G_PA1342" fbc:name="G_PA1342" fbc:label="G_PA1342">
+      <fbc:geneProduct metaid="G_PA2203" sboTerm="SBO:0000243" fbc:id="G_PA2203" fbc:name="G_PA2203" fbc:label="G_PA2203">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148332,18 +157672,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1342">
+            <rdf:Description rdf:about="#G_PA2203">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044664"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDR8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175443"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2203" sboTerm="SBO:0000243" fbc:id="G_PA2203" fbc:name="G_PA2203" fbc:label="G_PA2203">
+      <fbc:geneProduct metaid="G_PA1339" sboTerm="SBO:0000243" fbc:id="G_PA1339" fbc:name="G_PA1339" fbc:label="G_PA1339">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148351,26 +157693,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2203">
+            <rdf:Description rdf:about="#G_PA1339">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDR8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175443"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044717"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044717"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5082" sboTerm="SBO:0000243" fbc:id="G_PA5082" fbc:name="G_PA5082" fbc:label="G_PA5082">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5479" sboTerm="SBO:0000243" fbc:id="G_PA5479" fbc:name="G_PA5479" fbc:label="G_PA5479">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148572,7 +157905,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5557" sboTerm="SBO:0000243" fbc:id="G_PA5557" fbc:name="G_PA5557" fbc:label="G_PA5557">
+      <fbc:geneProduct metaid="G_PA5558" sboTerm="SBO:0000243" fbc:id="G_PA5558" fbc:name="G_PA5558" fbc:label="G_PA5558">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148580,18 +157913,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5557">
+            <rdf:Description rdf:about="#G_PA5558">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046071"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5556" sboTerm="SBO:0000243" fbc:id="G_PA5556" fbc:name="G_PA5556" fbc:label="G_PA5556">
+      <fbc:geneProduct metaid="G_PA5560" sboTerm="SBO:0000243" fbc:id="G_PA5560" fbc:name="G_PA5560" fbc:label="G_PA5560">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148599,18 +157932,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5556">
+            <rdf:Description rdf:about="#G_PA5560">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045265"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5561" sboTerm="SBO:0000243" fbc:id="G_PA5561" fbc:name="G_PA5561" fbc:label="G_PA5561">
+      <fbc:geneProduct metaid="G_PA5557" sboTerm="SBO:0000243" fbc:id="G_PA5557" fbc:name="G_PA5557" fbc:label="G_PA5557">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148618,18 +157951,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5561">
+            <rdf:Description rdf:about="#G_PA5557">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042018"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5560" sboTerm="SBO:0000243" fbc:id="G_PA5560" fbc:name="G_PA5560" fbc:label="G_PA5560">
+      <fbc:geneProduct metaid="G_PA5555" sboTerm="SBO:0000243" fbc:id="G_PA5555" fbc:name="G_PA5555" fbc:label="G_PA5555">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148637,11 +157970,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5560">
+            <rdf:Description rdf:about="#G_PA5555">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045265"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045265"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042016"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5561" sboTerm="SBO:0000243" fbc:id="G_PA5561" fbc:name="G_PA5561" fbc:label="G_PA5561">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA5561">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042004"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148678,7 +158030,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5555" sboTerm="SBO:0000243" fbc:id="G_PA5555" fbc:name="G_PA5555" fbc:label="G_PA5555">
+      <fbc:geneProduct metaid="G_PA5556" sboTerm="SBO:0000243" fbc:id="G_PA5556" fbc:name="G_PA5556" fbc:label="G_PA5556">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148686,11 +158038,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5555">
+            <rdf:Description rdf:about="#G_PA5556">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148716,25 +158068,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5558" sboTerm="SBO:0000243" fbc:id="G_PA5558" fbc:name="G_PA5558" fbc:label="G_PA5558">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5558">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046071"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046071"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5559" sboTerm="SBO:0000243" fbc:id="G_PA5559" fbc:name="G_PA5559" fbc:label="G_PA5559">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148829,7 +158162,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5373" sboTerm="SBO:0000243" fbc:id="G_PA5373" fbc:name="G_PA5373" fbc:label="G_PA5373">
+      <fbc:geneProduct metaid="G_PA2125" sboTerm="SBO:0000243" fbc:id="G_PA2125" fbc:name="G_PA2125" fbc:label="G_PA2125">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148837,27 +158170,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5373">
+            <rdf:Description rdf:about="#G_PA2125">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041862"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041862"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001072"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17445"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947376"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002086"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012303"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHN3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11940"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P71016"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2125" sboTerm="SBO:0000243" fbc:id="G_PA2125" fbc:name="G_PA2125" fbc:label="G_PA2125">
+      <fbc:geneProduct metaid="G_PA5373" sboTerm="SBO:0000243" fbc:id="G_PA5373" fbc:name="G_PA5373" fbc:label="G_PA5373">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148865,18 +158196,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2125">
+            <rdf:Description rdf:about="#G_PA5373">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002086"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011264"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015590"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016160"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016161"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016162"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016163"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029510"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11940"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P71016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHN3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174015"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148944,7 +158277,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4153" sboTerm="SBO:0000243" fbc:id="G_PA4153" fbc:name="G_PA4153" fbc:label="G_PA4153">
+      <fbc:geneProduct metaid="G_PA4097" sboTerm="SBO:0000243" fbc:id="G_PA4097" fbc:name="G_PA4097" fbc:label="G_PA4097">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148952,18 +158285,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4153">
+            <rdf:Description rdf:about="#G_PA4097">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044336"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34788"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4097" sboTerm="SBO:0000243" fbc:id="G_PA4097" fbc:name="G_PA4097" fbc:label="G_PA4097">
+      <fbc:geneProduct metaid="G_PA4153" sboTerm="SBO:0000243" fbc:id="G_PA4153" fbc:name="G_PA4153" fbc:label="G_PA4153">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148971,17 +158310,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4097">
+            <rdf:Description rdf:about="#G_PA4153">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002085"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002328"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013149"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013154"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12803"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044336"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149032,7 +158365,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2596" sboTerm="SBO:0000243" fbc:id="G_PA2596" fbc:name="G_PA2596" fbc:label="G_PA2596">
+      <fbc:geneProduct metaid="G_PA3443" sboTerm="SBO:0000243" fbc:id="G_PA3443" fbc:name="G_PA3443" fbc:label="G_PA3443">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149040,20 +158373,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2596">
+            <rdf:Description rdf:about="#G_PA3443">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75853"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CL45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176446"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3937" sboTerm="SBO:0000243" fbc:id="G_PA3937" fbc:name="G_PA3937" fbc:label="G_PA3937">
+      <fbc:geneProduct metaid="G_PA3938" sboTerm="SBO:0000243" fbc:id="G_PA3938" fbc:name="G_PA3938" fbc:label="G_PA3938">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149061,22 +158395,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3937">
+            <rdf:Description rdf:about="#G_PA3938">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13300"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3442" sboTerm="SBO:0000243" fbc:id="G_PA3442" fbc:name="G_PA3442" fbc:label="G_PA3442">
+      <fbc:geneProduct metaid="G_PA2307" sboTerm="SBO:0000243" fbc:id="G_PA2307" fbc:name="G_PA2307" fbc:label="G_PA2307">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3937" sboTerm="SBO:0000243" fbc:id="G_PA3937" fbc:name="G_PA3937" fbc:label="G_PA3937">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149084,18 +158425,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3442">
+            <rdf:Description rdf:about="#G_PA3937">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043803"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13299"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3936" sboTerm="SBO:0000243" fbc:id="G_PA3936" fbc:name="G_PA3936" fbc:label="G_PA3936">
+      <fbc:geneProduct metaid="G_PA2599" sboTerm="SBO:0000243" fbc:id="G_PA2599" fbc:name="G_PA2599" fbc:label="G_PA2599">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149103,29 +158448,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3936">
+            <rdf:Description rdf:about="#G_PA2599">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47539"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13301"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WB29"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176444"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2307" sboTerm="SBO:0000243" fbc:id="G_PA2307" fbc:name="G_PA2307" fbc:label="G_PA2307">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0184" sboTerm="SBO:0000243" fbc:id="G_PA0184" fbc:name="G_PA0184" fbc:label="G_PA0184">
+      <fbc:geneProduct metaid="G_PA3442" sboTerm="SBO:0000243" fbc:id="G_PA3442" fbc:name="G_PA3442" fbc:label="G_PA3442">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149133,23 +158470,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0184">
+            <rdf:Description rdf:about="#G_PA3442">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12232"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P97027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043803"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3445" sboTerm="SBO:0000243" fbc:id="G_PA3445" fbc:name="G_PA3445" fbc:label="G_PA3445">
+      <fbc:geneProduct metaid="G_PA2596" sboTerm="SBO:0000243" fbc:id="G_PA2596" fbc:name="G_PA2596" fbc:label="G_PA2596">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149157,18 +158489,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3445">
+            <rdf:Description rdf:about="#G_PA2596">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13707"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3443" sboTerm="SBO:0000243" fbc:id="G_PA3443" fbc:name="G_PA3443" fbc:label="G_PA3443">
+      <fbc:geneProduct metaid="G_PA3936" sboTerm="SBO:0000243" fbc:id="G_PA3936" fbc:name="G_PA3936" fbc:label="G_PA3936">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149176,21 +158510,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3443">
+            <rdf:Description rdf:about="#G_PA3936">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043802"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043802"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CL45"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176446"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13301"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3938" sboTerm="SBO:0000243" fbc:id="G_PA3938" fbc:name="G_PA3938" fbc:label="G_PA3938">
+      <fbc:geneProduct metaid="G_PA3445" sboTerm="SBO:0000243" fbc:id="G_PA3445" fbc:name="G_PA3445" fbc:label="G_PA3445">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149198,22 +158533,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3938">
+            <rdf:Description rdf:about="#G_PA3445">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q47537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043799"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2599" sboTerm="SBO:0000243" fbc:id="G_PA2599" fbc:name="G_PA2599" fbc:label="G_PA2599">
+      <fbc:geneProduct metaid="G_PA0184" sboTerm="SBO:0000243" fbc:id="G_PA0184" fbc:name="G_PA0184" fbc:label="G_PA0184">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149221,14 +158552,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2599">
+            <rdf:Description rdf:about="#G_PA0184">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010067"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WB29"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176444"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P97027"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149274,6 +158607,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2514" sboTerm="SBO:0000243" fbc:id="G_PA2514" fbc:name="G_PA2514" fbc:label="G_PA2514">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2518" sboTerm="SBO:0000243" fbc:id="G_PA2518" fbc:name="G_PA2518" fbc:label="G_PA2518">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149293,12 +158633,24 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2514" sboTerm="SBO:0000243" fbc:id="G_PA2514" fbc:name="G_PA2514" fbc:label="G_PA2514">
+      <fbc:geneProduct metaid="G_PA2516" sboTerm="SBO:0000243" fbc:id="G_PA2516" fbc:name="G_PA2516" fbc:label="G_PA2516">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2516">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2517" sboTerm="SBO:0000243" fbc:id="G_PA2517" fbc:name="G_PA2517" fbc:label="G_PA2517">
         <notes>
@@ -149326,25 +158678,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2516" sboTerm="SBO:0000243" fbc:id="G_PA2516" fbc:name="G_PA2516" fbc:label="G_PA2516">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2516">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046808"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046808"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2515" sboTerm="SBO:0000243" fbc:id="G_PA2515" fbc:name="G_PA2515" fbc:label="G_PA2515">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149411,6 +158744,53 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4236" sboTerm="SBO:0000243" fbc:id="G_PA4236" fbc:name="G_PA4236" fbc:label="G_PA4236">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4236">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011614"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH91"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174053"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2185" sboTerm="SBO:0000243" fbc:id="G_PA2185" fbc:name="G_PA2185" fbc:label="G_PA2185">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2147" sboTerm="SBO:0000243" fbc:id="G_PA2147" fbc:name="G_PA2147" fbc:label="G_PA2147">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2147">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043606"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4613" sboTerm="SBO:0000243" fbc:id="G_PA4613" fbc:name="G_PA4613" fbc:label="G_PA4613">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149449,53 +158829,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2147" sboTerm="SBO:0000243" fbc:id="G_PA2147" fbc:name="G_PA2147" fbc:label="G_PA2147">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2147">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043606"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4236" sboTerm="SBO:0000243" fbc:id="G_PA4236" fbc:name="G_PA4236" fbc:label="G_PA4236">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4236">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011614"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH91"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174053"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2185" sboTerm="SBO:0000243" fbc:id="G_PA2185" fbc:name="G_PA2185" fbc:label="G_PA2185">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2507" sboTerm="SBO:0000243" fbc:id="G_PA2507" fbc:name="G_PA2507" fbc:label="G_PA2507">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149651,7 +158984,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3963" sboTerm="SBO:0000243" fbc:id="G_PA3963" fbc:name="G_PA3963" fbc:label="G_PA3963">
+      <fbc:geneProduct metaid="G_PA1297" sboTerm="SBO:0000243" fbc:id="G_PA1297" fbc:name="G_PA1297" fbc:label="G_PA1297">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149659,18 +158992,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3963">
+            <rdf:Description rdf:about="#G_PA1297">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13662"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1297" sboTerm="SBO:0000243" fbc:id="G_PA1297" fbc:name="G_PA1297" fbc:label="G_PA1297">
+      <fbc:geneProduct metaid="G_PA3963" sboTerm="SBO:0000243" fbc:id="G_PA3963" fbc:name="G_PA3963" fbc:label="G_PA3963">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149678,13 +159013,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1297">
+            <rdf:Description rdf:about="#G_PA3963">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75757"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042045"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149794,21 +159127,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4108" sboTerm="SBO:0000243" fbc:id="G_PA4108" fbc:name="G_PA4108" fbc:label="G_PA4108">
+      <fbc:geneProduct metaid="G_PA0285" sboTerm="SBO:0000243" fbc:id="G_PA0285" fbc:name="G_PA0285" fbc:label="G_PA0285">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5017" sboTerm="SBO:0000243" fbc:id="G_PA5017" fbc:name="G_PA5017" fbc:label="G_PA5017">
+      <fbc:geneProduct metaid="G_PA4856" sboTerm="SBO:0000243" fbc:id="G_PA4856" fbc:name="G_PA4856" fbc:label="G_PA4856">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2072" sboTerm="SBO:0000243" fbc:id="G_PA2072" fbc:name="G_PA2072" fbc:label="G_PA2072">
+      <fbc:geneProduct metaid="G_PA2572" sboTerm="SBO:0000243" fbc:id="G_PA2572" fbc:name="G_PA2572" fbc:label="G_PA2572">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4108" sboTerm="SBO:0000243" fbc:id="G_PA4108" fbc:name="G_PA4108" fbc:label="G_PA4108">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149836,75 +159176,68 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5442" sboTerm="SBO:0000243" fbc:id="G_PA5442" fbc:name="G_PA5442" fbc:label="G_PA5442">
+      <fbc:geneProduct metaid="G_PA5511" sboTerm="SBO:0000243" fbc:id="G_PA5511" fbc:name="G_PA5511" fbc:label="G_PA5511">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2572" sboTerm="SBO:0000243" fbc:id="G_PA2572" fbc:name="G_PA2572" fbc:label="G_PA2572">
+      <fbc:geneProduct metaid="G_PA4781" sboTerm="SBO:0000243" fbc:id="G_PA4781" fbc:name="G_PA4781" fbc:label="G_PA4781">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4959" sboTerm="SBO:0000243" fbc:id="G_PA4959" fbc:name="G_PA4959" fbc:label="G_PA4959">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4959">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77172"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946968"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14202"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5511" sboTerm="SBO:0000243" fbc:id="G_PA5511" fbc:name="G_PA5511" fbc:label="G_PA5511">
+      <fbc:geneProduct metaid="G_PA5017" sboTerm="SBO:0000243" fbc:id="G_PA5017" fbc:name="G_PA5017" fbc:label="G_PA5017">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4856" sboTerm="SBO:0000243" fbc:id="G_PA4856" fbc:name="G_PA4856" fbc:label="G_PA4856">
+      <fbc:geneProduct metaid="G_PA2072" sboTerm="SBO:0000243" fbc:id="G_PA2072" fbc:name="G_PA2072" fbc:label="G_PA2072">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4781" sboTerm="SBO:0000243" fbc:id="G_PA4781" fbc:name="G_PA4781" fbc:label="G_PA4781">
+      <fbc:geneProduct metaid="G_PA0575" sboTerm="SBO:0000243" fbc:id="G_PA0575" fbc:name="G_PA0575" fbc:label="G_PA0575">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0575" sboTerm="SBO:0000243" fbc:id="G_PA0575" fbc:name="G_PA0575" fbc:label="G_PA0575">
+      <fbc:geneProduct metaid="G_PA5442" sboTerm="SBO:0000243" fbc:id="G_PA5442" fbc:name="G_PA5442" fbc:label="G_PA5442">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0285" sboTerm="SBO:0000243" fbc:id="G_PA0285" fbc:name="G_PA0285" fbc:label="G_PA0285">
+      <fbc:geneProduct metaid="G_PA4959" sboTerm="SBO:0000243" fbc:id="G_PA4959" fbc:name="G_PA4959" fbc:label="G_PA4959">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4959">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946968"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14202"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4669" sboTerm="SBO:0000243" fbc:id="G_PA4669" fbc:name="G_PA4669" fbc:label="G_PA4669">
         <notes>
@@ -149986,7 +159319,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5378" sboTerm="SBO:0000243" fbc:id="G_PA5378" fbc:name="G_PA5378" fbc:label="G_PA5378">
+      <fbc:geneProduct metaid="G_PA5376" sboTerm="SBO:0000243" fbc:id="G_PA5376" fbc:name="G_PA5376" fbc:label="G_PA5376">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149994,18 +159327,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5378">
+            <rdf:Description rdf:about="#G_PA5376">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043984"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043984"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043981"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3890" sboTerm="SBO:0000243" fbc:id="G_PA3890" fbc:name="G_PA3890" fbc:label="G_PA3890">
+      <fbc:geneProduct metaid="G_PA3889" sboTerm="SBO:0000243" fbc:id="G_PA3889" fbc:name="G_PA3889" fbc:label="G_PA3889">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150013,18 +159346,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3890">
+            <rdf:Description rdf:about="#G_PA3889">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044747"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5377" sboTerm="SBO:0000243" fbc:id="G_PA5377" fbc:name="G_PA5377" fbc:label="G_PA5377">
+      <fbc:geneProduct metaid="G_PA3888" sboTerm="SBO:0000243" fbc:id="G_PA3888" fbc:name="G_PA3888" fbc:label="G_PA3888">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150032,18 +159365,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5377">
+            <rdf:Description rdf:about="#G_PA3888">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043983"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044748"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5376" sboTerm="SBO:0000243" fbc:id="G_PA5376" fbc:name="G_PA5376" fbc:label="G_PA5376">
+      <fbc:geneProduct metaid="G_PA5377" sboTerm="SBO:0000243" fbc:id="G_PA5377" fbc:name="G_PA5377" fbc:label="G_PA5377">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150051,18 +159384,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5376">
+            <rdf:Description rdf:about="#G_PA5377">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043981"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043983"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3888" sboTerm="SBO:0000243" fbc:id="G_PA3888" fbc:name="G_PA3888" fbc:label="G_PA3888">
+      <fbc:geneProduct metaid="G_PA5378" sboTerm="SBO:0000243" fbc:id="G_PA5378" fbc:name="G_PA5378" fbc:label="G_PA5378">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150070,11 +159403,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3888">
+            <rdf:Description rdf:about="#G_PA5378">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043984"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043984"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150100,7 +159433,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3889" sboTerm="SBO:0000243" fbc:id="G_PA3889" fbc:name="G_PA3889" fbc:label="G_PA3889">
+      <fbc:geneProduct metaid="G_PA3890" sboTerm="SBO:0000243" fbc:id="G_PA3890" fbc:name="G_PA3890" fbc:label="G_PA3890">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150108,11 +159441,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3889">
+            <rdf:Description rdf:about="#G_PA3890">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044746"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150184,7 +159517,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0029" sboTerm="SBO:0000243" fbc:id="G_PA0029" fbc:name="G_PA0029" fbc:label="G_PA0029">
+      <fbc:geneProduct metaid="G_PA0030" sboTerm="SBO:0000243" fbc:id="G_PA0030" fbc:name="G_PA0030" fbc:label="G_PA0030">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150192,18 +159525,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0029">
+            <rdf:Description rdf:about="#G_PA0030">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043556"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043557"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0030" sboTerm="SBO:0000243" fbc:id="G_PA0030" fbc:name="G_PA0030" fbc:label="G_PA0030">
+      <fbc:geneProduct metaid="G_PA0029" sboTerm="SBO:0000243" fbc:id="G_PA0029" fbc:name="G_PA0029" fbc:label="G_PA0029">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150211,18 +159544,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0030">
+            <rdf:Description rdf:about="#G_PA0029">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043557"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043556"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5291" sboTerm="SBO:0000243" fbc:id="G_PA5291" fbc:name="G_PA5291" fbc:label="G_PA5291">
+      <fbc:geneProduct metaid="G_PA5375" sboTerm="SBO:0000243" fbc:id="G_PA5375" fbc:name="G_PA5375" fbc:label="G_PA5375">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150230,11 +159563,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5291">
+            <rdf:Description rdf:about="#G_PA5375">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044579"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150260,7 +159593,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5375" sboTerm="SBO:0000243" fbc:id="G_PA5375" fbc:name="G_PA5375" fbc:label="G_PA5375">
+      <fbc:geneProduct metaid="G_PA5291" sboTerm="SBO:0000243" fbc:id="G_PA5291" fbc:name="G_PA5291" fbc:label="G_PA5291">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150268,11 +159601,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5375">
+            <rdf:Description rdf:about="#G_PA5291">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044579"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046606"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150353,32 +159686,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4343" sboTerm="SBO:0000243" fbc:id="G_PA4343" fbc:name="G_PA4343" fbc:label="G_PA4343">
+      <fbc:geneProduct metaid="G_PA5476" sboTerm="SBO:0000243" fbc:id="G_PA5476" fbc:name="G_PA5476" fbc:label="G_PA5476">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4343">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046223"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046223"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042847"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042847"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046296"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046296"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013462"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C0L7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948626"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11612"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5468" sboTerm="SBO:0000243" fbc:id="G_PA5468" fbc:name="G_PA5468" fbc:label="G_PA5468">
         <notes>
@@ -150399,14 +159712,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5476" sboTerm="SBO:0000243" fbc:id="G_PA5476" fbc:name="G_PA5476" fbc:label="G_PA5476">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2155" sboTerm="SBO:0000243" fbc:id="G_PA2155" fbc:name="G_PA2155" fbc:label="G_PA2155">
+      <fbc:geneProduct metaid="G_PA4343" sboTerm="SBO:0000243" fbc:id="G_PA4343" fbc:name="G_PA4343" fbc:label="G_PA4343">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150414,17 +159720,32 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2155">
+            <rdf:Description rdf:about="#G_PA4343">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046911"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046223"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046223"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046296"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046296"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0C0L7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11612"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5310" sboTerm="SBO:0000243" fbc:id="G_PA5310" fbc:name="G_PA5310" fbc:label="G_PA5310">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4339" sboTerm="SBO:0000243" fbc:id="G_PA4339" fbc:name="G_PA4339" fbc:label="G_PA4339">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150453,14 +159774,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5310" sboTerm="SBO:0000243" fbc:id="G_PA5310" fbc:name="G_PA5310" fbc:label="G_PA5310">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5394" sboTerm="SBO:0000243" fbc:id="G_PA5394" fbc:name="G_PA5394" fbc:label="G_PA5394">
+      <fbc:geneProduct metaid="G_PA2155" sboTerm="SBO:0000243" fbc:id="G_PA2155" fbc:name="G_PA2155" fbc:label="G_PA2155">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150468,18 +159782,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5394">
+            <rdf:Description rdf:about="#G_PA2155">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046911"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2033" sboTerm="SBO:0000243" fbc:id="G_PA2033" fbc:name="G_PA2033" fbc:label="G_PA2033">
+      <fbc:geneProduct metaid="G_PA5394" sboTerm="SBO:0000243" fbc:id="G_PA5394" fbc:name="G_PA5394" fbc:label="G_PA5394">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150487,17 +159801,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2033">
+            <rdf:Description rdf:about="#G_PA5394">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046267"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4223" sboTerm="SBO:0000243" fbc:id="G_PA4223" fbc:name="G_PA4223" fbc:label="G_PA4223">
+      <fbc:geneProduct metaid="G_PA2033" sboTerm="SBO:0000243" fbc:id="G_PA2033" fbc:name="G_PA2033" fbc:label="G_PA2033">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150505,10 +159820,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4223">
+            <rdf:Description rdf:about="#G_PA2033">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888180"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150552,6 +159867,167 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4223" sboTerm="SBO:0000243" fbc:id="G_PA4223" fbc:name="G_PA4223" fbc:label="G_PA4223">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4223">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886853"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2912" sboTerm="SBO:0000243" fbc:id="G_PA2912" fbc:name="G_PA2912" fbc:label="G_PA2912">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2912">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014057"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKD5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34510"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2914" sboTerm="SBO:0000243" fbc:id="G_PA2914" fbc:name="G_PA2914" fbc:label="G_PA2914">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2914">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34451"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2913" sboTerm="SBO:0000243" fbc:id="G_PA2913" fbc:name="G_PA2913" fbc:label="G_PA2913">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2913">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045545"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0969" sboTerm="SBO:0000243" fbc:id="G_PA0969" fbc:name="G_PA0969" fbc:label="G_PA0969">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0969">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABU7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WIZ0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173525"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1910" sboTerm="SBO:0000243" fbc:id="G_PA1910" fbc:name="G_PA1910" fbc:label="G_PA1910">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1910">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045977"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0199" sboTerm="SBO:0000243" fbc:id="G_PA0199" fbc:name="G_PA0199" fbc:label="G_PA0199">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0199">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042225"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4123" sboTerm="SBO:0000243" fbc:id="G_PA4123" fbc:name="G_PA4123" fbc:label="G_PA4123">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150626,7 +160102,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4974" sboTerm="SBO:0000243" fbc:id="G_PA4974" fbc:name="G_PA4974" fbc:label="G_PA4974">
+      <fbc:geneProduct metaid="G_PA2018" sboTerm="SBO:0000243" fbc:id="G_PA2018" fbc:name="G_PA2018" fbc:label="G_PA2018">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150634,20 +160110,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4974">
+            <rdf:Description rdf:about="#G_PA2018">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009965"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02930"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947521"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24177"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10014"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2018" sboTerm="SBO:0000243" fbc:id="G_PA2018" fbc:name="G_PA2018" fbc:label="G_PA2018">
+      <fbc:geneProduct metaid="G_PA4974" sboTerm="SBO:0000243" fbc:id="G_PA4974" fbc:name="G_PA4974" fbc:label="G_PA4974">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150655,17 +160135,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2018">
+            <rdf:Description rdf:about="#G_PA4974">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001601"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31224"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945108"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008136"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24177"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945464"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11009"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150868,6 +160344,48 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0386" sboTerm="SBO:0000243" fbc:id="G_PA0386" fbc:name="G_PA0386" fbc:label="G_PA0386">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0386">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WI95"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173782"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1546" sboTerm="SBO:0000243" fbc:id="G_PA1546" fbc:name="G_PA1546" fbc:label="G_PA1546">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1546">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041746"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5386" sboTerm="SBO:0000243" fbc:id="G_PA5386" fbc:name="G_PA5386" fbc:label="G_PA5386">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150922,25 +160440,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5096" sboTerm="SBO:0000243" fbc:id="G_PA5096" fbc:name="G_PA5096" fbc:label="G_PA5096">
+      <fbc:geneProduct metaid="G_PA5103" sboTerm="SBO:0000243" fbc:id="G_PA5103" fbc:name="G_PA5103" fbc:label="G_PA5103">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5096">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJT4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175477"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5095" sboTerm="SBO:0000243" fbc:id="G_PA5095" fbc:name="G_PA5095" fbc:label="G_PA5095">
         <notes>
@@ -150966,14 +160471,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5103" sboTerm="SBO:0000243" fbc:id="G_PA5103" fbc:name="G_PA5103" fbc:label="G_PA5103">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5370" sboTerm="SBO:0000243" fbc:id="G_PA5370" fbc:name="G_PA5370" fbc:label="G_PA5370">
+      <fbc:geneProduct metaid="G_PA5096" sboTerm="SBO:0000243" fbc:id="G_PA5096" fbc:name="G_PA5096" fbc:label="G_PA5096">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150981,13 +160479,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5370">
+            <rdf:Description rdf:about="#G_PA5096">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CG73"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJT4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175477"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151013,7 +160510,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5388" sboTerm="SBO:0000243" fbc:id="G_PA5388" fbc:name="G_PA5388" fbc:label="G_PA5388">
+      <fbc:geneProduct metaid="G_PA5370" sboTerm="SBO:0000243" fbc:id="G_PA5370" fbc:name="G_PA5370" fbc:label="G_PA5370">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151021,18 +160518,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5388">
+            <rdf:Description rdf:about="#G_PA5370">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CG73"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173309"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0281" sboTerm="SBO:0000243" fbc:id="G_PA0281" fbc:name="G_PA0281" fbc:label="G_PA0281">
+      <fbc:geneProduct metaid="G_PA5388" sboTerm="SBO:0000243" fbc:id="G_PA5388" fbc:name="G_PA5388" fbc:label="G_PA5388">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151040,18 +160539,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0281">
+            <rdf:Description rdf:about="#G_PA5388">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043995"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0283" sboTerm="SBO:0000243" fbc:id="G_PA0283" fbc:name="G_PA0283" fbc:label="G_PA0283">
+      <fbc:geneProduct metaid="G_PA0282" sboTerm="SBO:0000243" fbc:id="G_PA0282" fbc:name="G_PA0282" fbc:label="G_PA0282">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151059,11 +160558,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0283">
+            <rdf:Description rdf:about="#G_PA0282">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151089,7 +160588,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1493" sboTerm="SBO:0000243" fbc:id="G_PA1493" fbc:name="G_PA1493" fbc:label="G_PA1493">
+      <fbc:geneProduct metaid="G_PA0281" sboTerm="SBO:0000243" fbc:id="G_PA0281" fbc:name="G_PA0281" fbc:label="G_PA0281">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151097,18 +160596,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1493">
+            <rdf:Description rdf:about="#G_PA0281">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043415"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043415"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0282" sboTerm="SBO:0000243" fbc:id="G_PA0282" fbc:name="G_PA0282" fbc:label="G_PA0282">
+      <fbc:geneProduct metaid="G_PA0283" sboTerm="SBO:0000243" fbc:id="G_PA0283" fbc:name="G_PA0283" fbc:label="G_PA0283">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151116,18 +160615,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0282">
+            <rdf:Description rdf:about="#G_PA0283">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042535"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4289" sboTerm="SBO:0000243" fbc:id="G_PA4289" fbc:name="G_PA4289" fbc:label="G_PA4289">
+      <fbc:geneProduct metaid="G_PA1493" sboTerm="SBO:0000243" fbc:id="G_PA1493" fbc:name="G_PA1493" fbc:label="G_PA1493">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151135,18 +160634,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4289">
+            <rdf:Description rdf:about="#G_PA1493">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043415"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043415"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1580" sboTerm="SBO:0000243" fbc:id="G_PA1580" fbc:name="G_PA1580" fbc:label="G_PA1580">
+      <fbc:geneProduct metaid="G_PA4289" sboTerm="SBO:0000243" fbc:id="G_PA4289" fbc:name="G_PA4289" fbc:label="G_PA4289">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151154,18 +160653,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1580">
+            <rdf:Description rdf:about="#G_PA4289">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042422"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045910"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3767" sboTerm="SBO:0000243" fbc:id="G_PA3767" fbc:name="G_PA3767" fbc:label="G_PA3767">
+      <fbc:geneProduct metaid="G_PA1580" sboTerm="SBO:0000243" fbc:id="G_PA1580" fbc:name="G_PA1580" fbc:label="G_PA1580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151173,15 +160672,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3767">
+            <rdf:Description rdf:about="#G_PA1580">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016192"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016193"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P21335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042422"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042422"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151213,6 +160708,29 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3767" sboTerm="SBO:0000243" fbc:id="G_PA3767" fbc:name="G_PA3767" fbc:label="G_PA3767">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3767">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR028883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P21335"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5099" sboTerm="SBO:0000243" fbc:id="G_PA5099" fbc:name="G_PA5099" fbc:label="G_PA5099">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151320,51 +160838,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0969" sboTerm="SBO:0000243" fbc:id="G_PA0969" fbc:name="G_PA0969" fbc:label="G_PA0969">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0969">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042208"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009869"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABU7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945420"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10271"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WIZ0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173525"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0199" sboTerm="SBO:0000243" fbc:id="G_PA0199" fbc:name="G_PA0199" fbc:label="G_PA0199">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0199">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042225"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3790" sboTerm="SBO:0000243" fbc:id="G_PA3790" fbc:name="G_PA3790" fbc:label="G_PA3790">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151426,6 +160899,122 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4956" sboTerm="SBO:0000243" fbc:id="G_PA4956" fbc:name="G_PA4956" fbc:label="G_PA4956">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4956">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042587"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0589" sboTerm="SBO:0000243" fbc:id="G_PA0589" fbc:name="G_PA0589" fbc:label="G_PA0589">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0589">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044112"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044112"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2603" sboTerm="SBO:0000243" fbc:id="G_PA2603" fbc:name="G_PA2603" fbc:label="G_PA2603">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2603">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18C56"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18C56"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887174"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1292" sboTerm="SBO:0000243" fbc:id="G_PA1292" fbc:name="G_PA1292" fbc:label="G_PA1292">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1292">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042662"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1626" sboTerm="SBO:0000243" fbc:id="G_PA1626" fbc:name="G_PA1626" fbc:label="G_PA1626">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1626">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044890"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2500" sboTerm="SBO:0000243" fbc:id="G_PA2500" fbc:name="G_PA2500" fbc:label="G_PA2500">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2500">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043675"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2052" sboTerm="SBO:0000243" fbc:id="G_PA2052" fbc:name="G_PA2052" fbc:label="G_PA2052">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151468,7 +161057,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4429" sboTerm="SBO:0000243" fbc:id="G_PA4429" fbc:name="G_PA4429" fbc:label="G_PA4429">
+      <fbc:geneProduct metaid="G_PA4430" sboTerm="SBO:0000243" fbc:id="G_PA4430" fbc:name="G_PA4430" fbc:label="G_PA4430">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151476,18 +161065,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4429">
+            <rdf:Description rdf:about="#G_PA4430">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4431" sboTerm="SBO:0000243" fbc:id="G_PA4431" fbc:name="G_PA4431" fbc:label="G_PA4431">
+      <fbc:geneProduct metaid="G_PA4429" sboTerm="SBO:0000243" fbc:id="G_PA4429" fbc:name="G_PA4429" fbc:label="G_PA4429">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151495,18 +161084,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4431">
+            <rdf:Description rdf:about="#G_PA4429">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4430" sboTerm="SBO:0000243" fbc:id="G_PA4430" fbc:name="G_PA4430" fbc:label="G_PA4430">
+      <fbc:geneProduct metaid="G_PA4431" sboTerm="SBO:0000243" fbc:id="G_PA4431" fbc:name="G_PA4431" fbc:label="G_PA4431">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151514,11 +161103,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4430">
+            <rdf:Description rdf:about="#G_PA4431">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151565,13 +161154,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1061" sboTerm="SBO:0000243" fbc:id="G_PA1061" fbc:name="G_PA1061" fbc:label="G_PA1061">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0932" sboTerm="SBO:0000243" fbc:id="G_PA0932" fbc:name="G_PA0932" fbc:label="G_PA0932">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151610,42 +161192,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0400" sboTerm="SBO:0000243" fbc:id="G_PA0400" fbc:name="G_PA0400" fbc:label="G_PA0400">
+      <fbc:geneProduct metaid="G_PA1061" sboTerm="SBO:0000243" fbc:id="G_PA1061" fbc:name="G_PA1061" fbc:label="G_PA1061">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1876" sboTerm="SBO:0000243" fbc:id="G_PA1876" fbc:name="G_PA1876" fbc:label="G_PA1876">
+      <fbc:geneProduct metaid="G_PA0400" sboTerm="SBO:0000243" fbc:id="G_PA0400" fbc:name="G_PA0400" fbc:label="G_PA0400">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0314" sboTerm="SBO:0000243" fbc:id="G_PA0314" fbc:name="G_PA0314" fbc:label="G_PA0314">
+      <fbc:geneProduct metaid="G_PA1876" sboTerm="SBO:0000243" fbc:id="G_PA1876" fbc:name="G_PA1876" fbc:label="G_PA1876">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0314">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006392"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEM9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12680"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0313" sboTerm="SBO:0000243" fbc:id="G_PA0313" fbc:name="G_PA0313" fbc:label="G_PA0313">
         <notes>
@@ -151670,7 +161236,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3897" sboTerm="SBO:0000243" fbc:id="G_PA3897" fbc:name="G_PA3897" fbc:label="G_PA3897">
+      <fbc:geneProduct metaid="G_PA0314" sboTerm="SBO:0000243" fbc:id="G_PA0314" fbc:name="G_PA0314" fbc:label="G_PA0314">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151678,13 +161244,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3897">
+            <rdf:Description rdf:about="#G_PA0314">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005116"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEM9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12680"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151731,6 +161299,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3897" sboTerm="SBO:0000243" fbc:id="G_PA3897" fbc:name="G_PA3897" fbc:label="G_PA3897">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3897">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11639"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1320" sboTerm="SBO:0000243" fbc:id="G_PA1320" fbc:name="G_PA1320" fbc:label="G_PA1320">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151755,7 +161344,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3930" sboTerm="SBO:0000243" fbc:id="G_PA3930" fbc:name="G_PA3930" fbc:label="G_PA3930">
+      <fbc:geneProduct metaid="G_PA3929" sboTerm="SBO:0000243" fbc:id="G_PA3929" fbc:name="G_PA3929" fbc:label="G_PA3929">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151763,18 +161352,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3930">
+            <rdf:Description rdf:about="#G_PA3929">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043772"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042538"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3929" sboTerm="SBO:0000243" fbc:id="G_PA3929" fbc:name="G_PA3929" fbc:label="G_PA3929">
+      <fbc:geneProduct metaid="G_PA3930" sboTerm="SBO:0000243" fbc:id="G_PA3930" fbc:name="G_PA3930" fbc:label="G_PA3930">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151782,11 +161371,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3929">
+            <rdf:Description rdf:about="#G_PA3930">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043772"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043772"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151819,31 +161408,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1319" sboTerm="SBO:0000243" fbc:id="G_PA1319" fbc:name="G_PA1319" fbc:label="G_PA1319">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1319">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001491"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABJ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946897"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000298"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK35"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175981"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1317" sboTerm="SBO:0000243" fbc:id="G_PA1317" fbc:name="G_PA1317" fbc:label="G_PA1317">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151875,12 +161439,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1425" sboTerm="SBO:0000243" fbc:id="G_PA1425" fbc:name="G_PA1425" fbc:label="G_PA1425">
+      <fbc:geneProduct metaid="G_PA1319" sboTerm="SBO:0000243" fbc:id="G_PA1319" fbc:name="G_PA1319" fbc:label="G_PA1319">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1319">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK35"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175981"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0521" sboTerm="SBO:0000243" fbc:id="G_PA0521" fbc:name="G_PA0521" fbc:label="G_PA0521">
         <notes>
@@ -151905,7 +161487,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0106" sboTerm="SBO:0000243" fbc:id="G_PA0106" fbc:name="G_PA0106" fbc:label="G_PA0106">
+      <fbc:geneProduct metaid="G_PA1425" sboTerm="SBO:0000243" fbc:id="G_PA1425" fbc:name="G_PA1425" fbc:label="G_PA1425">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0108" sboTerm="SBO:0000243" fbc:id="G_PA0108" fbc:name="G_PA0108" fbc:label="G_PA0108">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151913,18 +161502,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0106">
+            <rdf:Description rdf:about="#G_PA0108">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043590"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0108" sboTerm="SBO:0000243" fbc:id="G_PA0108" fbc:name="G_PA0108" fbc:label="G_PA0108">
+      <fbc:geneProduct metaid="G_PA0107" sboTerm="SBO:0000243" fbc:id="G_PA0107" fbc:name="G_PA0107" fbc:label="G_PA0107">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151932,11 +161521,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0108">
+            <rdf:Description rdf:about="#G_PA0107">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151962,7 +161551,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0107" sboTerm="SBO:0000243" fbc:id="G_PA0107" fbc:name="G_PA0107" fbc:label="G_PA0107">
+      <fbc:geneProduct metaid="G_PA0106" sboTerm="SBO:0000243" fbc:id="G_PA0106" fbc:name="G_PA0106" fbc:label="G_PA0106">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151970,18 +161559,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0107">
+            <rdf:Description rdf:about="#G_PA0106">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043590"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1553" sboTerm="SBO:0000243" fbc:id="G_PA1553" fbc:name="G_PA1553" fbc:label="G_PA1553">
+      <fbc:geneProduct metaid="G_PA1554" sboTerm="SBO:0000243" fbc:id="G_PA1554" fbc:name="G_PA1554" fbc:label="G_PA1554">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151989,18 +161578,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1553">
+            <rdf:Description rdf:about="#G_PA1554">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1554" sboTerm="SBO:0000243" fbc:id="G_PA1554" fbc:name="G_PA1554" fbc:label="G_PA1554">
+      <fbc:geneProduct metaid="G_PA1556" sboTerm="SBO:0000243" fbc:id="G_PA1556" fbc:name="G_PA1556" fbc:label="G_PA1556">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152008,23 +161597,35 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1554">
+            <rdf:Description rdf:about="#G_PA1556">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041937"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1552_1" sboTerm="SBO:0000243" fbc:id="G_PA1552_1" fbc:name="G_PA1552_1" fbc:label="G_PA1552_1">
+      <fbc:geneProduct metaid="G_PA1557" sboTerm="SBO:0000243" fbc:id="G_PA1557" fbc:name="G_PA1557" fbc:label="G_PA1557">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1557">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1552" sboTerm="SBO:0000243" fbc:id="G_PA1552" fbc:name="G_PA1552" fbc:label="G_PA1552">
         <notes>
@@ -152047,7 +161648,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1557" sboTerm="SBO:0000243" fbc:id="G_PA1557" fbc:name="G_PA1557" fbc:label="G_PA1557">
+      <fbc:geneProduct metaid="G_PA1553" sboTerm="SBO:0000243" fbc:id="G_PA1553" fbc:name="G_PA1553" fbc:label="G_PA1553">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152055,35 +161656,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1557">
+            <rdf:Description rdf:about="#G_PA1553">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041699"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1556" sboTerm="SBO:0000243" fbc:id="G_PA1556" fbc:name="G_PA1556" fbc:label="G_PA1556">
+      <fbc:geneProduct metaid="G_PA1552_1" sboTerm="SBO:0000243" fbc:id="G_PA1552_1" fbc:name="G_PA1552_1" fbc:label="G_PA1552_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1556">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041937"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041937"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3163" sboTerm="SBO:0000243" fbc:id="G_PA3163" fbc:name="G_PA3163" fbc:label="G_PA3163">
         <notes>
@@ -152138,7 +161727,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5304" sboTerm="SBO:0000243" fbc:id="G_PA5304" fbc:name="G_PA5304" fbc:label="G_PA5304">
+      <fbc:geneProduct metaid="G_PA5084" sboTerm="SBO:0000243" fbc:id="G_PA5084" fbc:name="G_PA5084" fbc:label="G_PA5084">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152146,20 +161735,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5304">
+            <rdf:Description rdf:about="#G_PA5084">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042325"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WF15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174982"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5084" sboTerm="SBO:0000243" fbc:id="G_PA5084" fbc:name="G_PA5084" fbc:label="G_PA5084">
+      <fbc:geneProduct metaid="G_PA5304" sboTerm="SBO:0000243" fbc:id="G_PA5304" fbc:name="G_PA5304" fbc:label="G_PA5304">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152167,17 +161760,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5084">
+            <rdf:Description rdf:about="#G_PA5304">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11407"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006076"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WF15"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042325"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152203,7 +161792,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4805" sboTerm="SBO:0000243" fbc:id="G_PA4805" fbc:name="G_PA4805" fbc:label="G_PA4805">
+      <fbc:geneProduct metaid="G_PA2413" sboTerm="SBO:0000243" fbc:id="G_PA2413" fbc:name="G_PA2413" fbc:label="G_PA2413">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152211,18 +161800,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4805">
+            <rdf:Description rdf:about="#G_PA2413">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042550"/>
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               </bqbiol:is>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2413" sboTerm="SBO:0000243" fbc:id="G_PA2413" fbc:name="G_PA2413" fbc:label="G_PA2413">
+      <fbc:geneProduct metaid="G_PA4805" sboTerm="SBO:0000243" fbc:id="G_PA4805" fbc:name="G_PA4805" fbc:label="G_PA4805">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152230,11 +161819,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2413">
+            <rdf:Description rdf:about="#G_PA4805">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042550"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044262"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152304,7 +161893,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4913" sboTerm="SBO:0000243" fbc:id="G_PA4913" fbc:name="G_PA4913" fbc:label="G_PA4913">
+      <fbc:geneProduct metaid="G_PA4909" sboTerm="SBO:0000243" fbc:id="G_PA4909" fbc:name="G_PA4909" fbc:label="G_PA4909">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152312,18 +161901,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4913">
+            <rdf:Description rdf:about="#G_PA4909">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042617"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4911" sboTerm="SBO:0000243" fbc:id="G_PA4911" fbc:name="G_PA4911" fbc:label="G_PA4911">
+      <fbc:geneProduct metaid="G_PA4910" sboTerm="SBO:0000243" fbc:id="G_PA4910" fbc:name="G_PA4910" fbc:label="G_PA4910">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152331,18 +161920,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4911">
+            <rdf:Description rdf:about="#G_PA4910">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043236"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043236"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042659"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4910" sboTerm="SBO:0000243" fbc:id="G_PA4910" fbc:name="G_PA4910" fbc:label="G_PA4910">
+      <fbc:geneProduct metaid="G_PA4912" sboTerm="SBO:0000243" fbc:id="G_PA4912" fbc:name="G_PA4912" fbc:label="G_PA4912">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152350,18 +161939,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4910">
+            <rdf:Description rdf:about="#G_PA4912">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042659"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041896"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4909" sboTerm="SBO:0000243" fbc:id="G_PA4909" fbc:name="G_PA4909" fbc:label="G_PA4909">
+      <fbc:geneProduct metaid="G_PA4911" sboTerm="SBO:0000243" fbc:id="G_PA4911" fbc:name="G_PA4911" fbc:label="G_PA4911">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152369,18 +161958,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4909">
+            <rdf:Description rdf:about="#G_PA4911">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043236"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043236"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4912" sboTerm="SBO:0000243" fbc:id="G_PA4912" fbc:name="G_PA4912" fbc:label="G_PA4912">
+      <fbc:geneProduct metaid="G_PA4913" sboTerm="SBO:0000243" fbc:id="G_PA4913" fbc:name="G_PA4913" fbc:label="G_PA4913">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152388,11 +161977,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4912">
+            <rdf:Description rdf:about="#G_PA4913">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043170"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152437,7 +162026,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2536" sboTerm="SBO:0000243" fbc:id="G_PA2536" fbc:name="G_PA2536" fbc:label="G_PA2536">
+      <fbc:geneProduct metaid="G_PA3651" sboTerm="SBO:0000243" fbc:id="G_PA3651" fbc:name="G_PA3651" fbc:label="G_PA3651">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152445,19 +162034,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2536">
+            <rdf:Description rdf:about="#G_PA3651">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJY4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045118"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3651" sboTerm="SBO:0000243" fbc:id="G_PA3651" fbc:name="G_PA3651" fbc:label="G_PA3651">
+      <fbc:geneProduct metaid="G_PA2536" sboTerm="SBO:0000243" fbc:id="G_PA2536" fbc:name="G_PA2536" fbc:label="G_PA2536">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152465,11 +162053,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3651">
+            <rdf:Description rdf:about="#G_PA2536">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045118"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJY4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175641"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152535,7 +162124,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2943" sboTerm="SBO:0000243" fbc:id="G_PA2943" fbc:name="G_PA2943" fbc:label="G_PA2943">
+      <fbc:geneProduct metaid="G_PA4212" sboTerm="SBO:0000243" fbc:id="G_PA4212" fbc:name="G_PA4212" fbc:label="G_PA4212">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152543,18 +162132,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2943">
+            <rdf:Description rdf:about="#G_PA4212">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043781"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900153"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1750" sboTerm="SBO:0000243" fbc:id="G_PA1750" fbc:name="G_PA1750" fbc:label="G_PA1750">
+      <fbc:geneProduct metaid="G_PA1901" sboTerm="SBO:0000243" fbc:id="G_PA1901" fbc:name="G_PA1901" fbc:label="G_PA1901">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152562,11 +162150,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1750">
+            <rdf:Description rdf:about="#G_PA1901">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888309"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152592,25 +162179,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4212" sboTerm="SBO:0000243" fbc:id="G_PA4212" fbc:name="G_PA4212" fbc:label="G_PA4212">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4212">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900153"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1901" sboTerm="SBO:0000243" fbc:id="G_PA1901" fbc:name="G_PA1901" fbc:label="G_PA1901">
+      <fbc:geneProduct metaid="G_PA2943" sboTerm="SBO:0000243" fbc:id="G_PA2943" fbc:name="G_PA2943" fbc:label="G_PA2943">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152618,17 +162187,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1901">
+            <rdf:Description rdf:about="#G_PA2943">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043781"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3131" sboTerm="SBO:0000243" fbc:id="G_PA3131" fbc:name="G_PA3131" fbc:label="G_PA3131">
+      <fbc:geneProduct metaid="G_PA1750" sboTerm="SBO:0000243" fbc:id="G_PA1750" fbc:name="G_PA1750" fbc:label="G_PA1750">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -152636,17 +162206,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3131">
+            <rdf:Description rdf:about="#G_PA1750">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899635"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006164"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A955"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946367"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000887"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIC5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045317"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -152740,6 +162304,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4843" sboTerm="SBO:0000243" fbc:id="G_PA4843" fbc:name="G_PA4843" fbc:label="G_PA4843">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2870" sboTerm="SBO:0000243" fbc:id="G_PA2870" fbc:name="G_PA2870" fbc:label="G_PA2870">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -152761,12 +162332,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3177" sboTerm="SBO:0000243" fbc:id="G_PA3177" fbc:name="G_PA3177" fbc:label="G_PA3177">
+      <fbc:geneProduct metaid="G_PA2786" sboTerm="SBO:0000243" fbc:id="G_PA2786" fbc:name="G_PA2786" fbc:label="G_PA2786">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2786">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005972"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948969"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13502"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4929" sboTerm="SBO:0000243" fbc:id="G_PA4929" fbc:name="G_PA4929" fbc:label="G_PA4929">
         <notes>
@@ -152775,40 +162360,19 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4982" sboTerm="SBO:0000243" fbc:id="G_PA4982" fbc:name="G_PA4982" fbc:label="G_PA4982">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4843" sboTerm="SBO:0000243" fbc:id="G_PA4843" fbc:name="G_PA4843" fbc:label="G_PA4843">
+      <fbc:geneProduct metaid="G_PA3177" sboTerm="SBO:0000243" fbc:id="G_PA3177" fbc:name="G_PA3177" fbc:label="G_PA3177">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2786" sboTerm="SBO:0000243" fbc:id="G_PA2786" fbc:name="G_PA2786" fbc:label="G_PA2786">
+      <fbc:geneProduct metaid="G_PA4982" sboTerm="SBO:0000243" fbc:id="G_PA4982" fbc:name="G_PA4982" fbc:label="G_PA4982">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2786">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005972"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76245"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948969"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13502"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0745" sboTerm="SBO:0000243" fbc:id="G_PA0745" fbc:name="G_PA0745" fbc:label="G_PA0745">
         <notes>
@@ -152897,6 +162461,184 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4158" sboTerm="SBO:0000243" fbc:id="G_PA4158" fbc:name="G_PA4158" fbc:label="G_PA4158">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4158">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10295"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4161" sboTerm="SBO:0000243" fbc:id="G_PA4161" fbc:name="G_PA4161" fbc:label="G_PA4161">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4161">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10298"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4160" sboTerm="SBO:0000243" fbc:id="G_PA4160" fbc:name="G_PA4160" fbc:label="G_PA4160">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4160">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10296"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4159" sboTerm="SBO:0000243" fbc:id="G_PA4159" fbc:name="G_PA4159" fbc:label="G_PA4159">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4159">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEL6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10294"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0931" sboTerm="SBO:0000243" fbc:id="G_PA0931" fbc:name="G_PA0931" fbc:label="G_PA0931">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2688" sboTerm="SBO:0000243" fbc:id="G_PA2688" fbc:name="G_PA2688" fbc:label="G_PA2688">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2688">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P05825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10293"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0970" sboTerm="SBO:0000243" fbc:id="G_PA0970" fbc:name="G_PA0970" fbc:label="G_PA0970">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0970">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABV2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CGI6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173526"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1922" sboTerm="SBO:0000243" fbc:id="G_PA1922" fbc:name="G_PA1922" fbc:label="G_PA1922">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1922">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10155"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5531" sboTerm="SBO:0000243" fbc:id="G_PA5531" fbc:name="G_PA5531" fbc:label="G_PA5531">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA5531">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02929"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11012"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4759" sboTerm="SBO:0000243" fbc:id="G_PA4759" fbc:name="G_PA4759" fbc:label="G_PA4759">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -152973,44 +162715,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4188" sboTerm="SBO:0000243" fbc:id="G_PA4188" fbc:name="G_PA4188" fbc:label="G_PA4188">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4188">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020624"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020625"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q17ZX0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q17ZX0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020625"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q181M9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q181M9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000921"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75682"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944925"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P39359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948825"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12550"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5150" sboTerm="SBO:0000243" fbc:id="G_PA5150" fbc:name="G_PA5150" fbc:label="G_PA5150">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153034,6 +162738,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3437" sboTerm="SBO:0000243" fbc:id="G_PA3437" fbc:name="G_PA3437" fbc:label="G_PA3437">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0350" sboTerm="SBO:0000243" fbc:id="G_PA0350" fbc:name="G_PA0350" fbc:label="G_PA0350">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153053,13 +162764,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3437" sboTerm="SBO:0000243" fbc:id="G_PA3437" fbc:name="G_PA3437" fbc:label="G_PA3437">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3111" sboTerm="SBO:0000243" fbc:id="G_PA3111" fbc:name="G_PA3111" fbc:label="G_PA3111">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153117,7 +162821,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3527" sboTerm="SBO:0000243" fbc:id="G_PA3527" fbc:name="G_PA3527" fbc:label="G_PA3527">
+      <fbc:geneProduct metaid="G_PA5541" sboTerm="SBO:0000243" fbc:id="G_PA5541" fbc:name="G_PA5541" fbc:label="G_PA5541">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153125,18 +162829,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3527">
+            <rdf:Description rdf:about="#G_PA5541">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002195"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P25995"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5541" sboTerm="SBO:0000243" fbc:id="G_PA5541" fbc:name="G_PA5541" fbc:label="G_PA5541">
+      <fbc:geneProduct metaid="G_PA3527" sboTerm="SBO:0000243" fbc:id="G_PA3527" fbc:name="G_PA3527" fbc:label="G_PA3527">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153144,15 +162852,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5541">
+            <rdf:Description rdf:about="#G_PA3527">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002195"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006680"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10714"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P25995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045131"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153270,7 +162974,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5154" sboTerm="SBO:0000243" fbc:id="G_PA5154" fbc:name="G_PA5154" fbc:label="G_PA5154">
+      <fbc:geneProduct metaid="G_PA4167" sboTerm="SBO:0000243" fbc:id="G_PA4167" fbc:name="G_PA4167" fbc:label="G_PA4167">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153278,11 +162982,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5154">
+            <rdf:Description rdf:about="#G_PA4167">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043892"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045398"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153348,7 +163052,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5155" sboTerm="SBO:0000243" fbc:id="G_PA5155" fbc:name="G_PA5155" fbc:label="G_PA5155">
+      <fbc:geneProduct metaid="G_PA5154" sboTerm="SBO:0000243" fbc:id="G_PA5154" fbc:name="G_PA5154" fbc:label="G_PA5154">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153356,18 +163060,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5155">
+            <rdf:Description rdf:about="#G_PA5154">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043892"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4640" sboTerm="SBO:0000243" fbc:id="G_PA4640" fbc:name="G_PA4640" fbc:label="G_PA4640">
+      <fbc:geneProduct metaid="G_PA5155" sboTerm="SBO:0000243" fbc:id="G_PA5155" fbc:name="G_PA5155" fbc:label="G_PA5155">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153375,11 +163079,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4640">
+            <rdf:Description rdf:about="#G_PA5155">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044587"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043890"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153411,7 +163115,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4043" sboTerm="SBO:0000243" fbc:id="G_PA4043" fbc:name="G_PA4043" fbc:label="G_PA4043">
+      <fbc:geneProduct metaid="G_PA4640" sboTerm="SBO:0000243" fbc:id="G_PA4640" fbc:name="G_PA4640" fbc:label="G_PA4640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153419,18 +163123,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4043">
+            <rdf:Description rdf:about="#G_PA4640">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044304"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044587"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5411" sboTerm="SBO:0000243" fbc:id="G_PA5411" fbc:name="G_PA5411" fbc:label="G_PA5411">
+      <fbc:geneProduct metaid="G_PA4043" sboTerm="SBO:0000243" fbc:id="G_PA4043" fbc:name="G_PA4043" fbc:label="G_PA4043">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153438,11 +163142,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5411">
+            <rdf:Description rdf:about="#G_PA4043">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044011"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044304"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153468,6 +163172,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5411" sboTerm="SBO:0000243" fbc:id="G_PA5411" fbc:name="G_PA5411" fbc:label="G_PA5411">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA5411">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044011"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4557" sboTerm="SBO:0000243" fbc:id="G_PA4557" fbc:name="G_PA4557" fbc:label="G_PA4557">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153526,7 +163249,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2494" sboTerm="SBO:0000243" fbc:id="G_PA2494" fbc:name="G_PA2494" fbc:label="G_PA2494">
+      <fbc:geneProduct metaid="G_PA2493" sboTerm="SBO:0000243" fbc:id="G_PA2493" fbc:name="G_PA2493" fbc:label="G_PA2493">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153534,18 +163257,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2494">
+            <rdf:Description rdf:about="#G_PA2493">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2493" sboTerm="SBO:0000243" fbc:id="G_PA2493" fbc:name="G_PA2493" fbc:label="G_PA2493">
+      <fbc:geneProduct metaid="G_PA2495" sboTerm="SBO:0000243" fbc:id="G_PA2495" fbc:name="G_PA2495" fbc:label="G_PA2495">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153553,18 +163276,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2493">
+            <rdf:Description rdf:about="#G_PA2495">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046237"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2495" sboTerm="SBO:0000243" fbc:id="G_PA2495" fbc:name="G_PA2495" fbc:label="G_PA2495">
+      <fbc:geneProduct metaid="G_PA2494" sboTerm="SBO:0000243" fbc:id="G_PA2494" fbc:name="G_PA2494" fbc:label="G_PA2494">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153572,11 +163295,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2495">
+            <rdf:Description rdf:about="#G_PA2494">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046237"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153643,7 +163366,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4397" sboTerm="SBO:0000243" fbc:id="G_PA4397" fbc:name="G_PA4397" fbc:label="G_PA4397">
+      <fbc:geneProduct metaid="G_PA1752" sboTerm="SBO:0000243" fbc:id="G_PA1752" fbc:name="G_PA1752" fbc:label="G_PA1752">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153651,18 +163374,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4397">
+            <rdf:Description rdf:about="#G_PA1752">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045318"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1752" sboTerm="SBO:0000243" fbc:id="G_PA1752" fbc:name="G_PA1752" fbc:label="G_PA1752">
+      <fbc:geneProduct metaid="G_PA4694" sboTerm="SBO:0000243" fbc:id="G_PA4694" fbc:name="G_PA4694" fbc:label="G_PA4694">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153670,18 +163393,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1752">
+            <rdf:Description rdf:about="#G_PA4694">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041985"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4694" sboTerm="SBO:0000243" fbc:id="G_PA4694" fbc:name="G_PA4694" fbc:label="G_PA4694">
+      <fbc:geneProduct metaid="G_PA4397" sboTerm="SBO:0000243" fbc:id="G_PA4397" fbc:name="G_PA4397" fbc:label="G_PA4397">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153689,11 +163412,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4694">
+            <rdf:Description rdf:about="#G_PA4397">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041985"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -153906,6 +163629,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1240" sboTerm="SBO:0000243" fbc:id="G_PA1240" fbc:name="G_PA1240" fbc:label="G_PA1240">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2767" sboTerm="SBO:0000243" fbc:id="G_PA2767" fbc:name="G_PA2767" fbc:label="G_PA2767">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -153929,28 +163659,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1629" sboTerm="SBO:0000243" fbc:id="G_PA1629" fbc:name="G_PA1629" fbc:label="G_PA1629">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4330" sboTerm="SBO:0000243" fbc:id="G_PA4330" fbc:name="G_PA4330" fbc:label="G_PA4330">
+      <fbc:geneProduct metaid="G_PA0744" sboTerm="SBO:0000243" fbc:id="G_PA0744" fbc:name="G_PA0744" fbc:label="G_PA0744">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0744" sboTerm="SBO:0000243" fbc:id="G_PA0744" fbc:name="G_PA0744" fbc:label="G_PA0744">
+      <fbc:geneProduct metaid="G_PA1629" sboTerm="SBO:0000243" fbc:id="G_PA1629" fbc:name="G_PA1629" fbc:label="G_PA1629">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1240" sboTerm="SBO:0000243" fbc:id="G_PA1240" fbc:name="G_PA1240" fbc:label="G_PA1240">
+      <fbc:geneProduct metaid="G_PA4330" sboTerm="SBO:0000243" fbc:id="G_PA4330" fbc:name="G_PA4330" fbc:label="G_PA4330">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -153995,6 +163718,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3131" sboTerm="SBO:0000243" fbc:id="G_PA3131" fbc:name="G_PA3131" fbc:label="G_PA3131">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3131">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946367"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIC5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174905"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3194" sboTerm="SBO:0000243" fbc:id="G_PA3194" fbc:name="G_PA3194" fbc:label="G_PA3194">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154092,6 +163840,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1325" sboTerm="SBO:0000243" fbc:id="G_PA1325" fbc:name="G_PA1325" fbc:label="G_PA1325">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1491" sboTerm="SBO:0000243" fbc:id="G_PA1491" fbc:name="G_PA1491" fbc:label="G_PA1491">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154115,13 +163870,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1325" sboTerm="SBO:0000243" fbc:id="G_PA1325" fbc:name="G_PA1325" fbc:label="G_PA1325">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4023" sboTerm="SBO:0000243" fbc:id="G_PA4023" fbc:name="G_PA4023" fbc:label="G_PA4023">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154366,7 +164114,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2424" sboTerm="SBO:0000243" fbc:id="G_PA2424" fbc:name="G_PA2424" fbc:label="G_PA2424">
+      <fbc:geneProduct metaid="G_PA4078" sboTerm="SBO:0000243" fbc:id="G_PA4078" fbc:name="G_PA4078" fbc:label="G_PA4078">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154374,11 +164122,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2424">
+            <rdf:Description rdf:about="#G_PA4078">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042600"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/852412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000000319"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154404,7 +164154,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4078" sboTerm="SBO:0000243" fbc:id="G_PA4078" fbc:name="G_PA4078" fbc:label="G_PA4078">
+      <fbc:geneProduct metaid="G_PA2424" sboTerm="SBO:0000243" fbc:id="G_PA2424" fbc:name="G_PA2424" fbc:label="G_PA2424">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154412,13 +164162,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4078">
+            <rdf:Description rdf:about="#G_PA2424">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/852412"/>
-                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000000319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042600"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154470,7 +164218,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2765" sboTerm="SBO:0000243" fbc:id="G_PA2765" fbc:name="G_PA2765" fbc:label="G_PA2765">
+      <fbc:geneProduct metaid="G_PA4655" sboTerm="SBO:0000243" fbc:id="G_PA4655" fbc:name="G_PA4655" fbc:label="G_PA4655">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154478,20 +164226,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2765">
+            <rdf:Description rdf:about="#G_PA4655">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044580"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4655" sboTerm="SBO:0000243" fbc:id="G_PA4655" fbc:name="G_PA4655" fbc:label="G_PA4655">
+      <fbc:geneProduct metaid="G_PA2765" sboTerm="SBO:0000243" fbc:id="G_PA2765" fbc:name="G_PA2765" fbc:label="G_PA2765">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154499,18 +164245,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4655">
+            <rdf:Description rdf:about="#G_PA2765">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14165"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3534" sboTerm="SBO:0000243" fbc:id="G_PA3534" fbc:name="G_PA3534" fbc:label="G_PA3534">
+      <fbc:geneProduct metaid="G_PA4812" sboTerm="SBO:0000243" fbc:id="G_PA4812" fbc:name="G_PA4812" fbc:label="G_PA4812">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154518,37 +164266,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3534">
+            <rdf:Description rdf:about="#G_PA4812">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045046"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045046"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013363"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07658"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948584"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027467"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42434"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13476"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP82"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044259"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5180" sboTerm="SBO:0000243" fbc:id="G_PA5180" fbc:name="G_PA5180" fbc:label="G_PA5180">
+      <fbc:geneProduct metaid="G_PA5181" sboTerm="SBO:0000243" fbc:id="G_PA5181" fbc:name="G_PA5181" fbc:label="G_PA5181">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154556,17 +164284,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5180">
+            <rdf:Description rdf:about="#G_PA5181">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887987"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4809" sboTerm="SBO:0000243" fbc:id="G_PA4809" fbc:name="G_PA4809" fbc:label="G_PA4809">
+      <fbc:geneProduct metaid="G_PA3534" sboTerm="SBO:0000243" fbc:id="G_PA3534" fbc:name="G_PA3534" fbc:label="G_PA3534">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154574,18 +164302,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4809">
+            <rdf:Description rdf:about="#G_PA3534">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948584"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/C0SP82"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4812" sboTerm="SBO:0000243" fbc:id="G_PA4812" fbc:name="G_PA4812" fbc:label="G_PA4812">
+      <fbc:geneProduct metaid="G_PA4810" sboTerm="SBO:0000243" fbc:id="G_PA4810" fbc:name="G_PA4810" fbc:label="G_PA4810">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154593,10 +164340,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4812">
+            <rdf:Description rdf:about="#G_PA4810">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044261"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154622,7 +164370,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4810" sboTerm="SBO:0000243" fbc:id="G_PA4810" fbc:name="G_PA4810" fbc:label="G_PA4810">
+      <fbc:geneProduct metaid="G_PA5180" sboTerm="SBO:0000243" fbc:id="G_PA5180" fbc:name="G_PA5180" fbc:label="G_PA5180">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154630,18 +164378,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4810">
+            <rdf:Description rdf:about="#G_PA5180">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888201"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5181" sboTerm="SBO:0000243" fbc:id="G_PA5181" fbc:name="G_PA5181" fbc:label="G_PA5181">
+      <fbc:geneProduct metaid="G_PA4809" sboTerm="SBO:0000243" fbc:id="G_PA4809" fbc:name="G_PA4809" fbc:label="G_PA4809">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154649,17 +164396,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5181">
+            <rdf:Description rdf:about="#G_PA4809">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2356" sboTerm="SBO:0000243" fbc:id="G_PA2356" fbc:name="G_PA2356" fbc:label="G_PA2356">
+      <fbc:geneProduct metaid="G_PA2598" sboTerm="SBO:0000243" fbc:id="G_PA2598" fbc:name="G_PA2598" fbc:label="G_PA2598">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154667,23 +164415,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2356">
+            <rdf:Description rdf:about="#G_PA2598">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003178"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P80645"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945557"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13706"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011251"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WB28"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046867"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2598" sboTerm="SBO:0000243" fbc:id="G_PA2598" fbc:name="G_PA2598" fbc:label="G_PA2598">
+      <fbc:geneProduct metaid="G_PA3444" sboTerm="SBO:0000243" fbc:id="G_PA3444" fbc:name="G_PA3444" fbc:label="G_PA3444">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154691,18 +164434,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2598">
+            <rdf:Description rdf:about="#G_PA3444">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046867"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043800"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3444" sboTerm="SBO:0000243" fbc:id="G_PA3444" fbc:name="G_PA3444" fbc:label="G_PA3444">
+      <fbc:geneProduct metaid="G_PA3954" sboTerm="SBO:0000243" fbc:id="G_PA3954" fbc:name="G_PA3954" fbc:label="G_PA3954">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154710,18 +164453,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3444">
+            <rdf:Description rdf:about="#G_PA3954">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043800"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045898"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3954" sboTerm="SBO:0000243" fbc:id="G_PA3954" fbc:name="G_PA3954" fbc:label="G_PA3954">
+      <fbc:geneProduct metaid="G_PA2356" sboTerm="SBO:0000243" fbc:id="G_PA2356" fbc:name="G_PA2356" fbc:label="G_PA2356">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154729,11 +164472,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3954">
+            <rdf:Description rdf:about="#G_PA2356">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P80645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WB28"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176445"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154811,26 +164559,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2148" sboTerm="SBO:0000243" fbc:id="G_PA2148" fbc:name="G_PA2148" fbc:label="G_PA2148">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2148">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B3"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4359" sboTerm="SBO:0000243" fbc:id="G_PA4359" fbc:name="G_PA4359" fbc:label="G_PA4359">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -154852,44 +164580,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2912" sboTerm="SBO:0000243" fbc:id="G_PA2912" fbc:name="G_PA2912" fbc:label="G_PA2912">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2912">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045543"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045543"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000522"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07821"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945250"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10304"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014057"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P15031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948819"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10290"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKD5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176209"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12957"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34510"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2913" sboTerm="SBO:0000243" fbc:id="G_PA2913" fbc:name="G_PA2913" fbc:label="G_PA2913">
+      <fbc:geneProduct metaid="G_PA2148" sboTerm="SBO:0000243" fbc:id="G_PA2148" fbc:name="G_PA2148" fbc:label="G_PA2148">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154897,18 +164588,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2913">
+            <rdf:Description rdf:about="#G_PA2148">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B3"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2914" sboTerm="SBO:0000243" fbc:id="G_PA2914" fbc:name="G_PA2914" fbc:label="G_PA2914">
+      <fbc:geneProduct metaid="G_PA4615" sboTerm="SBO:0000243" fbc:id="G_PA4615" fbc:name="G_PA4615" fbc:label="G_PA4615">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154916,15 +164608,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2914">
+            <rdf:Description rdf:about="#G_PA4615">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042143"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -154950,26 +164638,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4615" sboTerm="SBO:0000243" fbc:id="G_PA4615" fbc:name="G_PA4615" fbc:label="G_PA4615">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4615">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042143"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0970" sboTerm="SBO:0000243" fbc:id="G_PA0970" fbc:name="G_PA0970" fbc:label="G_PA0970">
+      <fbc:geneProduct metaid="G_PA3268" sboTerm="SBO:0000243" fbc:id="G_PA3268" fbc:name="G_PA3268" fbc:label="G_PA3268">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -154977,16 +164646,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0970">
+            <rdf:Description rdf:about="#G_PA3268">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABV2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946345"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003400"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CGI6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044744"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155016,27 +164680,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5531" sboTerm="SBO:0000243" fbc:id="G_PA5531" fbc:name="G_PA5531" fbc:label="G_PA5531">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5531">
-              <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02929"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11012"/>
-                </rdf:Bag>
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-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2057" sboTerm="SBO:0000243" fbc:id="G_PA2057" fbc:name="G_PA2057" fbc:label="G_PA2057">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -155061,25 +164704,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3268" sboTerm="SBO:0000243" fbc:id="G_PA3268" fbc:name="G_PA3268" fbc:label="G_PA3268">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3268">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044744"/>
-                </rdf:Bag>
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-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4687" sboTerm="SBO:0000243" fbc:id="G_PA4687" fbc:name="G_PA4687" fbc:label="G_PA4687">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -155118,7 +164742,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5217" sboTerm="SBO:0000243" fbc:id="G_PA5217" fbc:name="G_PA5217" fbc:label="G_PA5217">
+      <fbc:geneProduct metaid="G_PA5216" sboTerm="SBO:0000243" fbc:id="G_PA5216" fbc:name="G_PA5216" fbc:label="G_PA5216">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155126,18 +164750,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5217">
+            <rdf:Description rdf:about="#G_PA5216">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042430"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5216" sboTerm="SBO:0000243" fbc:id="G_PA5216" fbc:name="G_PA5216" fbc:label="G_PA5216">
+      <fbc:geneProduct metaid="G_PA4688" sboTerm="SBO:0000243" fbc:id="G_PA4688" fbc:name="G_PA4688" fbc:label="G_PA4688">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155145,18 +164769,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5216">
+            <rdf:Description rdf:about="#G_PA4688">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042430"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042290"/>
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               </bqbiol:is>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4688" sboTerm="SBO:0000243" fbc:id="G_PA4688" fbc:name="G_PA4688" fbc:label="G_PA4688">
+      <fbc:geneProduct metaid="G_PA5217" sboTerm="SBO:0000243" fbc:id="G_PA5217" fbc:name="G_PA5217" fbc:label="G_PA5217">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155164,11 +164788,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4688">
+            <rdf:Description rdf:about="#G_PA5217">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042290"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155195,13 +164819,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3406" sboTerm="SBO:0000243" fbc:id="G_PA3406" fbc:name="G_PA3406" fbc:label="G_PA3406">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1246" sboTerm="SBO:0000243" fbc:id="G_PA1246" fbc:name="G_PA1246" fbc:label="G_PA1246">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -155209,28 +164826,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4161" sboTerm="SBO:0000243" fbc:id="G_PA4161" fbc:name="G_PA4161" fbc:label="G_PA4161">
+      <fbc:geneProduct metaid="G_PA3406" sboTerm="SBO:0000243" fbc:id="G_PA3406" fbc:name="G_PA3406" fbc:label="G_PA3406">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4161">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945209"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10298"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4160" sboTerm="SBO:0000243" fbc:id="G_PA4160" fbc:name="G_PA4160" fbc:label="G_PA4160">
+      <fbc:geneProduct metaid="G_PA2089" sboTerm="SBO:0000243" fbc:id="G_PA2089" fbc:name="G_PA2089" fbc:label="G_PA2089">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155238,41 +164841,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4160">
+            <rdf:Description rdf:about="#G_PA2089">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23876"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10296"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045124"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4158" sboTerm="SBO:0000243" fbc:id="G_PA4158" fbc:name="G_PA4158" fbc:label="G_PA4158">
+      <fbc:geneProduct metaid="G_PA0198" sboTerm="SBO:0000243" fbc:id="G_PA0198" fbc:name="G_PA0198" fbc:label="G_PA0198">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4158">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10295"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4159" sboTerm="SBO:0000243" fbc:id="G_PA4159" fbc:name="G_PA4159" fbc:label="G_PA4159">
+      <fbc:geneProduct metaid="G_PA2911" sboTerm="SBO:0000243" fbc:id="G_PA2911" fbc:name="G_PA2911" fbc:label="G_PA2911">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155280,27 +164867,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4159">
+            <rdf:Description rdf:about="#G_PA2911">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEL6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041681"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0198" sboTerm="SBO:0000243" fbc:id="G_PA0198" fbc:name="G_PA0198" fbc:label="G_PA0198">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2089" sboTerm="SBO:0000243" fbc:id="G_PA2089" fbc:name="G_PA2089" fbc:label="G_PA2089">
+      <fbc:geneProduct metaid="G_PA4837" sboTerm="SBO:0000243" fbc:id="G_PA4837" fbc:name="G_PA4837" fbc:label="G_PA4837">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155308,18 +164886,20 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2089">
+            <rdf:Description rdf:about="#G_PA4837">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045124"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000520"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06971"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944856"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10302"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2688" sboTerm="SBO:0000243" fbc:id="G_PA2688" fbc:name="G_PA2688" fbc:label="G_PA2688">
+      <fbc:geneProduct metaid="G_PA2466" sboTerm="SBO:0000243" fbc:id="G_PA2466" fbc:name="G_PA2466" fbc:label="G_PA2466">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155327,13 +164907,11 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2688">
+            <rdf:Description rdf:about="#G_PA2466">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P05825"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945193"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043683"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155347,7 +164925,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3768" sboTerm="SBO:0000243" fbc:id="G_PA3768" fbc:name="G_PA3768" fbc:label="G_PA3768">
+      <fbc:geneProduct metaid="G_PA3531" sboTerm="SBO:0000243" fbc:id="G_PA3531" fbc:name="G_PA3531" fbc:label="G_PA3531">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155355,18 +164933,22 @@
         </notes>
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-            <rdf:Description rdf:about="#G_PA3768">
+            <rdf:Description rdf:about="#G_PA3531">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10113"/>
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-      <fbc:geneProduct metaid="G_PA3531" sboTerm="SBO:0000243" fbc:id="G_PA3531" fbc:name="G_PA3531" fbc:label="G_PA3531">
+      <fbc:geneProduct metaid="G_PA3768" sboTerm="SBO:0000243" fbc:id="G_PA3768" fbc:name="G_PA3768" fbc:label="G_PA3768">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155374,15 +164956,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3531">
+            <rdf:Description rdf:about="#G_PA3768">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010903"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947839"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045068"/>
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@@ -155623,7 +165201,7 @@
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-      <fbc:geneProduct metaid="G_PA3562" sboTerm="SBO:0000243" fbc:id="G_PA3562" fbc:name="G_PA3562" fbc:label="G_PA3562">
+      <fbc:geneProduct metaid="G_PA3560" sboTerm="SBO:0000243" fbc:id="G_PA3560" fbc:name="G_PA3560" fbc:label="G_PA3560">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155631,18 +165209,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3562">
+            <rdf:Description rdf:about="#G_PA3560">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044636"/>
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-      <fbc:geneProduct metaid="G_PA3560" sboTerm="SBO:0000243" fbc:id="G_PA3560" fbc:name="G_PA3560" fbc:label="G_PA3560">
+      <fbc:geneProduct metaid="G_PA3562" sboTerm="SBO:0000243" fbc:id="G_PA3562" fbc:name="G_PA3562" fbc:label="G_PA3562">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155650,11 +165228,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3560">
+            <rdf:Description rdf:about="#G_PA3562">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044636"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
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               </bqbiol:is>
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@@ -155699,7 +165277,7 @@
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-      <fbc:geneProduct metaid="G_PA4314" sboTerm="SBO:0000243" fbc:id="G_PA4314" fbc:name="G_PA4314" fbc:label="G_PA4314">
+      <fbc:geneProduct metaid="G_PA5420" sboTerm="SBO:0000243" fbc:id="G_PA5420" fbc:name="G_PA5420" fbc:label="G_PA5420">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155707,18 +165285,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4314">
+            <rdf:Description rdf:about="#G_PA5420">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041724"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044026"/>
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-      <fbc:geneProduct metaid="G_PA5420" sboTerm="SBO:0000243" fbc:id="G_PA5420" fbc:name="G_PA5420" fbc:label="G_PA5420">
+      <fbc:geneProduct metaid="G_PA4314" sboTerm="SBO:0000243" fbc:id="G_PA4314" fbc:name="G_PA4314" fbc:label="G_PA4314">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155726,18 +165304,18 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5420">
+            <rdf:Description rdf:about="#G_PA4314">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041724"/>
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-      <fbc:geneProduct metaid="G_PA4470" sboTerm="SBO:0000243" fbc:id="G_PA4470" fbc:name="G_PA4470" fbc:label="G_PA4470">
+      <fbc:geneProduct metaid="G_PA4333" sboTerm="SBO:0000243" fbc:id="G_PA4333" fbc:name="G_PA4333" fbc:label="G_PA4333">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155745,11 +165323,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4470">
+            <rdf:Description rdf:about="#G_PA4333">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044855"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044855"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044785"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155775,7 +165353,7 @@
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4333" sboTerm="SBO:0000243" fbc:id="G_PA4333" fbc:name="G_PA4333" fbc:label="G_PA4333">
+      <fbc:geneProduct metaid="G_PA4470" sboTerm="SBO:0000243" fbc:id="G_PA4470" fbc:name="G_PA4470" fbc:label="G_PA4470">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155783,11 +165361,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4333">
+            <rdf:Description rdf:about="#G_PA4470">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044855"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044855"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -155813,7 +165391,7 @@
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3156" sboTerm="SBO:0000243" fbc:id="G_PA3156" fbc:name="G_PA3156" fbc:label="G_PA3156">
+      <fbc:geneProduct metaid="G_PA5552" sboTerm="SBO:0000243" fbc:id="G_PA5552" fbc:name="G_PA5552" fbc:label="G_PA5552">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155821,18 +165399,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3156">
+            <rdf:Description rdf:about="#G_PA5552">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897781"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045333"/>
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               </bqbiol:is>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5552" sboTerm="SBO:0000243" fbc:id="G_PA5552" fbc:name="G_PA5552" fbc:label="G_PA5552">
+      <fbc:geneProduct metaid="G_PA3156" sboTerm="SBO:0000243" fbc:id="G_PA3156" fbc:name="G_PA3156" fbc:label="G_PA3156">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -155840,11 +165418,11 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#G_PA5552">
+            <rdf:Description rdf:about="#G_PA3156">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045333"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896999"/>
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               </bqbiol:is>
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@@ -156064,7 +165642,7 @@
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5439" sboTerm="SBO:0000243" fbc:id="G_PA5439" fbc:name="G_PA5439" fbc:label="G_PA5439">
+      <fbc:geneProduct metaid="G_PA3183" sboTerm="SBO:0000243" fbc:id="G_PA3183" fbc:name="G_PA3183" fbc:label="G_PA3183">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156072,18 +165650,18 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5439">
+            <rdf:Description rdf:about="#G_PA3183">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044167"/>
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3183" sboTerm="SBO:0000243" fbc:id="G_PA3183" fbc:name="G_PA3183" fbc:label="G_PA3183">
+      <fbc:geneProduct metaid="G_PA5439" sboTerm="SBO:0000243" fbc:id="G_PA5439" fbc:name="G_PA5439" fbc:label="G_PA5439">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156091,11 +165669,11 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3183">
+            <rdf:Description rdf:about="#G_PA5439">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042114"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156123,25 +165701,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2264" sboTerm="SBO:0000243" fbc:id="G_PA2264" fbc:name="G_PA2264" fbc:label="G_PA2264">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2264">
-              <bqbiol:is>
-                <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046448"/>
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-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2266" sboTerm="SBO:0000243" fbc:id="G_PA2266" fbc:name="G_PA2266" fbc:label="G_PA2266">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156180,6 +165739,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2264" sboTerm="SBO:0000243" fbc:id="G_PA2264" fbc:name="G_PA2264" fbc:label="G_PA2264">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2264">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046448"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4041" sboTerm="SBO:0000243" fbc:id="G_PA4041" fbc:name="G_PA4041" fbc:label="G_PA4041">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156187,6 +165765,31 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2215" sboTerm="SBO:0000243" fbc:id="G_PA2215" fbc:name="G_PA2215" fbc:label="G_PA2215">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2215">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q6BF17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20050"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2210" sboTerm="SBO:0000243" fbc:id="G_PA2210" fbc:name="G_PA2210" fbc:label="G_PA2210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156247,7 +165850,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3780" sboTerm="SBO:0000243" fbc:id="G_PA3780" fbc:name="G_PA3780" fbc:label="G_PA3780">
+      <fbc:geneProduct metaid="G_PA0241" sboTerm="SBO:0000243" fbc:id="G_PA0241" fbc:name="G_PA0241" fbc:label="G_PA0241">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156255,18 +165858,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3780">
+            <rdf:Description rdf:about="#G_PA0241">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045721"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA78"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12738"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5169" sboTerm="SBO:0000243" fbc:id="G_PA5169" fbc:name="G_PA5169" fbc:label="G_PA5169">
+      <fbc:geneProduct metaid="G_PA3780" sboTerm="SBO:0000243" fbc:id="G_PA3780" fbc:name="G_PA3780" fbc:label="G_PA3780">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156274,18 +165879,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5169">
+            <rdf:Description rdf:about="#G_PA3780">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045721"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0241" sboTerm="SBO:0000243" fbc:id="G_PA0241" fbc:name="G_PA0241" fbc:label="G_PA0241">
+      <fbc:geneProduct metaid="G_PA5169" sboTerm="SBO:0000243" fbc:id="G_PA5169" fbc:name="G_PA5169" fbc:label="G_PA5169">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156293,13 +165898,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0241">
+            <rdf:Description rdf:about="#G_PA5169">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010171"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AA78"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947601"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12738"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045720"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156389,13 +165992,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2396" sboTerm="SBO:0000243" fbc:id="G_PA2396" fbc:name="G_PA2396" fbc:label="G_PA2396">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0944" sboTerm="SBO:0000243" fbc:id="G_PA0944" fbc:name="G_PA0944" fbc:label="G_PA0944">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156415,6 +166011,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2396" sboTerm="SBO:0000243" fbc:id="G_PA2396" fbc:name="G_PA2396" fbc:label="G_PA2396">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3751" sboTerm="SBO:0000243" fbc:id="G_PA3751" fbc:name="G_PA3751" fbc:label="G_PA3751">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -156434,7 +166037,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5398" sboTerm="SBO:0000243" fbc:id="G_PA5398" fbc:name="G_PA5398" fbc:label="G_PA5398">
+      <fbc:geneProduct metaid="G_PA5399" sboTerm="SBO:0000243" fbc:id="G_PA5399" fbc:name="G_PA5399" fbc:label="G_PA5399">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156442,18 +166045,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5398">
+            <rdf:Description rdf:about="#G_PA5399">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044003"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044006"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5399" sboTerm="SBO:0000243" fbc:id="G_PA5399" fbc:name="G_PA5399" fbc:label="G_PA5399">
+      <fbc:geneProduct metaid="G_PA5398" sboTerm="SBO:0000243" fbc:id="G_PA5398" fbc:name="G_PA5398" fbc:label="G_PA5398">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156461,11 +166064,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5399">
+            <rdf:Description rdf:about="#G_PA5398">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044006"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044003"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156479,7 +166082,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5338" sboTerm="SBO:0000243" fbc:id="G_PA5338" fbc:name="G_PA5338" fbc:label="G_PA5338">
+      <fbc:geneProduct metaid="G_PA0431" sboTerm="SBO:0000243" fbc:id="G_PA0431" fbc:name="G_PA0431" fbc:label="G_PA0431">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156487,18 +166090,34 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5338">
+            <rdf:Description rdf:about="#G_PA0431">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100764720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7197641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG24"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CLB1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172888"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0934" sboTerm="SBO:0000243" fbc:id="G_PA0934" fbc:name="G_PA0934" fbc:label="G_PA0934">
+      <fbc:geneProduct metaid="G_PA5338" sboTerm="SBO:0000243" fbc:id="G_PA5338" fbc:name="G_PA5338" fbc:label="G_PA5338">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156506,18 +166125,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0934">
+            <rdf:Description rdf:about="#G_PA5338">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044386"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042219"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0431" sboTerm="SBO:0000243" fbc:id="G_PA0431" fbc:name="G_PA0431" fbc:label="G_PA0431">
+      <fbc:geneProduct metaid="G_PA0934" sboTerm="SBO:0000243" fbc:id="G_PA0934" fbc:name="G_PA0934" fbc:label="G_PA0934">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156525,27 +166144,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0431">
+            <rdf:Description rdf:about="#G_PA0934">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100764720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7197641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011935"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG24"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948159"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10966"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003607"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004811"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012676"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CLB1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044386"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156669,7 +166272,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0534" sboTerm="SBO:0000243" fbc:id="G_PA0534" fbc:name="G_PA0534" fbc:label="G_PA0534">
+      <fbc:geneProduct metaid="G_PA2317" sboTerm="SBO:0000243" fbc:id="G_PA2317" fbc:name="G_PA2317" fbc:label="G_PA2317">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156677,18 +166280,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0534">
+            <rdf:Description rdf:about="#G_PA2317">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2776" sboTerm="SBO:0000243" fbc:id="G_PA2776" fbc:name="G_PA2776" fbc:label="G_PA2776">
+      <fbc:geneProduct metaid="G_PA0534" sboTerm="SBO:0000243" fbc:id="G_PA0534" fbc:name="G_PA0534" fbc:label="G_PA0534">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156696,18 +166299,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2776">
+            <rdf:Description rdf:about="#G_PA0534">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046536"/>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5309" sboTerm="SBO:0000243" fbc:id="G_PA5309" fbc:name="G_PA5309" fbc:label="G_PA5309">
+      <fbc:geneProduct metaid="G_PA2776" sboTerm="SBO:0000243" fbc:id="G_PA2776" fbc:name="G_PA2776" fbc:label="G_PA2776">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156715,18 +166318,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5309">
+            <rdf:Description rdf:about="#G_PA2776">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
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               </bqbiol:is>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2317" sboTerm="SBO:0000243" fbc:id="G_PA2317" fbc:name="G_PA2317" fbc:label="G_PA2317">
+      <fbc:geneProduct metaid="G_PA5309" sboTerm="SBO:0000243" fbc:id="G_PA5309" fbc:name="G_PA5309" fbc:label="G_PA5309">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156734,18 +166337,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2317">
+            <rdf:Description rdf:about="#G_PA5309">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3356" sboTerm="SBO:0000243" fbc:id="G_PA3356" fbc:name="G_PA3356" fbc:label="G_PA3356">
+      <fbc:geneProduct metaid="G_PA0298" sboTerm="SBO:0000243" fbc:id="G_PA0298" fbc:name="G_PA0298" fbc:label="G_PA0298">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156753,11 +166356,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3356">
+            <rdf:Description rdf:about="#G_PA0298">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041876"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042525"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156804,7 +166409,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0298" sboTerm="SBO:0000243" fbc:id="G_PA0298" fbc:name="G_PA0298" fbc:label="G_PA0298">
+      <fbc:geneProduct metaid="G_PA3356" sboTerm="SBO:0000243" fbc:id="G_PA3356" fbc:name="G_PA3356" fbc:label="G_PA3356">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156812,13 +166417,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0298">
+            <rdf:Description rdf:about="#G_PA3356">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046798"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041876"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -156853,7 +166456,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4602" sboTerm="SBO:0000243" fbc:id="G_PA4602" fbc:name="G_PA4602" fbc:label="G_PA4602">
+      <fbc:geneProduct metaid="G_PA5415" sboTerm="SBO:0000243" fbc:id="G_PA5415" fbc:name="G_PA5415" fbc:label="G_PA5415">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156861,18 +166464,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4602">
+            <rdf:Description rdf:about="#G_PA5415">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044495"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044019"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5415" sboTerm="SBO:0000243" fbc:id="G_PA5415" fbc:name="G_PA5415" fbc:label="G_PA5415">
+      <fbc:geneProduct metaid="G_PA4602" sboTerm="SBO:0000243" fbc:id="G_PA4602" fbc:name="G_PA4602" fbc:label="G_PA4602">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -156880,11 +166483,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5415">
+            <rdf:Description rdf:about="#G_PA4602">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044019"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044495"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157027,7 +166630,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2339" sboTerm="SBO:0000243" fbc:id="G_PA2339" fbc:name="G_PA2339" fbc:label="G_PA2339">
+      <fbc:geneProduct metaid="G_PA2340" sboTerm="SBO:0000243" fbc:id="G_PA2340" fbc:name="G_PA2340" fbc:label="G_PA2340">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157035,18 +166638,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2339">
+            <rdf:Description rdf:about="#G_PA2340">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887893"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180R3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180R3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888534"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2340" sboTerm="SBO:0000243" fbc:id="G_PA2340" fbc:name="G_PA2340" fbc:label="G_PA2340">
+      <fbc:geneProduct metaid="G_PA2339" sboTerm="SBO:0000243" fbc:id="G_PA2339" fbc:name="G_PA2339" fbc:label="G_PA2339">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157054,14 +166660,11 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2340">
+            <rdf:Description rdf:about="#G_PA2339">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180R3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180R3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885262"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157087,7 +166690,7 @@
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3190" sboTerm="SBO:0000243" fbc:id="G_PA3190" fbc:name="G_PA3190" fbc:label="G_PA3190">
+      <fbc:geneProduct metaid="G_PA3187" sboTerm="SBO:0000243" fbc:id="G_PA3187" fbc:name="G_PA3187" fbc:label="G_PA3187">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157095,18 +166698,18 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3190">
+            <rdf:Description rdf:about="#G_PA3187">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043966"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3187" sboTerm="SBO:0000243" fbc:id="G_PA3187" fbc:name="G_PA3187" fbc:label="G_PA3187">
+      <fbc:geneProduct metaid="G_PA3188" sboTerm="SBO:0000243" fbc:id="G_PA3188" fbc:name="G_PA3188" fbc:label="G_PA3188">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157114,18 +166717,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#G_PA3187">
+            <rdf:Description rdf:about="#G_PA3188">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044176"/>
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         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3188" sboTerm="SBO:0000243" fbc:id="G_PA3188" fbc:name="G_PA3188" fbc:label="G_PA3188">
+      <fbc:geneProduct metaid="G_PA3190" sboTerm="SBO:0000243" fbc:id="G_PA3190" fbc:name="G_PA3190" fbc:label="G_PA3190">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157133,11 +166736,11 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#G_PA3188">
+            <rdf:Description rdf:about="#G_PA3190">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043966"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157181,7 +166784,7 @@
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       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2204" sboTerm="SBO:0000243" fbc:id="G_PA2204" fbc:name="G_PA2204" fbc:label="G_PA2204">
+      <fbc:geneProduct metaid="G_PA4194" sboTerm="SBO:0000243" fbc:id="G_PA4194" fbc:name="G_PA4194" fbc:label="G_PA4194">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157189,21 +166792,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2204">
+            <rdf:Description rdf:about="#G_PA4194">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11486"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34671"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4064" sboTerm="SBO:0000243" fbc:id="G_PA4064" fbc:name="G_PA4064" fbc:label="G_PA4064">
+      <fbc:geneProduct metaid="G_PA2204" sboTerm="SBO:0000243" fbc:id="G_PA2204" fbc:name="G_PA2204" fbc:label="G_PA2204">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157211,17 +166813,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4064">
+            <rdf:Description rdf:about="#G_PA2204">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34563"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4194" sboTerm="SBO:0000243" fbc:id="G_PA4194" fbc:name="G_PA4194" fbc:label="G_PA4194">
+      <fbc:geneProduct metaid="G_PA4064" sboTerm="SBO:0000243" fbc:id="G_PA4064" fbc:name="G_PA4064" fbc:label="G_PA4064">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157229,13 +166835,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4194">
+            <rdf:Description rdf:about="#G_PA4064">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010065"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887898"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157441,6 +167044,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3134" sboTerm="SBO:0000243" fbc:id="G_PA3134" fbc:name="G_PA3134" fbc:label="G_PA3134">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3134">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043056"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4724" sboTerm="SBO:0000243" fbc:id="G_PA4724" fbc:name="G_PA4724" fbc:label="G_PA4724">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -157479,25 +167101,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3134" sboTerm="SBO:0000243" fbc:id="G_PA3134" fbc:name="G_PA3134" fbc:label="G_PA3134">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3134">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043056"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043056"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2108" sboTerm="SBO:0000243" fbc:id="G_PA2108" fbc:name="G_PA2108" fbc:label="G_PA2108">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -157567,6 +167170,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3581" sboTerm="SBO:0000243" fbc:id="G_PA3581" fbc:name="G_PA3581" fbc:label="G_PA3581">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3581">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5387" sboTerm="SBO:0000243" fbc:id="G_PA5387" fbc:name="G_PA5387" fbc:label="G_PA5387">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -157683,7 +167305,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2445" sboTerm="SBO:0000243" fbc:id="G_PA2445" fbc:name="G_PA2445" fbc:label="G_PA2445">
+      <fbc:geneProduct metaid="G_PA2446" sboTerm="SBO:0000243" fbc:id="G_PA2446" fbc:name="G_PA2446" fbc:label="G_PA2446">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157691,11 +167313,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2445">
+            <rdf:Description rdf:about="#G_PA2446">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044914"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044915"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157721,7 +167343,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2446" sboTerm="SBO:0000243" fbc:id="G_PA2446" fbc:name="G_PA2446" fbc:label="G_PA2446">
+      <fbc:geneProduct metaid="G_PA2445" sboTerm="SBO:0000243" fbc:id="G_PA2445" fbc:name="G_PA2445" fbc:label="G_PA2445">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157729,11 +167351,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2446">
+            <rdf:Description rdf:about="#G_PA2445">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044914"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -157899,52 +167521,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5354" sboTerm="SBO:0000243" fbc:id="G_PA5354" fbc:name="G_PA5354" fbc:label="G_PA5354">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5354">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52073"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847718"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12996"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5353" sboTerm="SBO:0000243" fbc:id="G_PA5353" fbc:name="G_PA5353" fbc:label="G_PA5353">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5353">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52074"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847717"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13291"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5355" sboTerm="SBO:0000243" fbc:id="G_PA5355" fbc:name="G_PA5355" fbc:label="G_PA5355">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -157968,7 +167544,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3581" sboTerm="SBO:0000243" fbc:id="G_PA3581" fbc:name="G_PA3581" fbc:label="G_PA3581">
+      <fbc:geneProduct metaid="G_PA5353" sboTerm="SBO:0000243" fbc:id="G_PA5353" fbc:name="G_PA5353" fbc:label="G_PA5353">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157976,18 +167552,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3581">
+            <rdf:Description rdf:about="#G_PA5353">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044845"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847717"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13291"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3579" sboTerm="SBO:0000243" fbc:id="G_PA3579" fbc:name="G_PA3579" fbc:label="G_PA3579">
+      <fbc:geneProduct metaid="G_PA5354" sboTerm="SBO:0000243" fbc:id="G_PA5354" fbc:name="G_PA5354" fbc:label="G_PA5354">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -157995,22 +167575,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3579">
+            <rdf:Description rdf:about="#G_PA5354">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005999"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018484"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898045"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005999"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018484"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P18157"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0174098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12996"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158069,7 +167642,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4548" sboTerm="SBO:0000243" fbc:id="G_PA4548" fbc:name="G_PA4548" fbc:label="G_PA4548">
+      <fbc:geneProduct metaid="G_PA3579" sboTerm="SBO:0000243" fbc:id="G_PA3579" fbc:name="G_PA3579" fbc:label="G_PA3579">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158077,23 +167650,46 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4548">
+            <rdf:Description rdf:about="#G_PA3579">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044429"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BQ0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BQ0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018483"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P18157"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2915" sboTerm="SBO:0000243" fbc:id="G_PA2915" fbc:name="G_PA2915" fbc:label="G_PA2915">
+      <fbc:geneProduct metaid="G_PA4548" sboTerm="SBO:0000243" fbc:id="G_PA4548" fbc:name="G_PA4548" fbc:label="G_PA4548">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4548">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044429"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1813" sboTerm="SBO:0000243" fbc:id="G_PA1813" fbc:name="G_PA1813" fbc:label="G_PA1813">
         <notes>
@@ -158135,6 +167731,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2915" sboTerm="SBO:0000243" fbc:id="G_PA2915" fbc:name="G_PA2915" fbc:label="G_PA2915">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0531" sboTerm="SBO:0000243" fbc:id="G_PA0531" fbc:name="G_PA0531" fbc:label="G_PA0531">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -158366,7 +167969,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2826" sboTerm="SBO:0000243" fbc:id="G_PA2826" fbc:name="G_PA2826" fbc:label="G_PA2826">
+      <fbc:geneProduct metaid="G_PA1287" sboTerm="SBO:0000243" fbc:id="G_PA1287" fbc:name="G_PA1287" fbc:label="G_PA1287">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158374,18 +167977,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2826">
+            <rdf:Description rdf:about="#G_PA1287">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043222"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1287" sboTerm="SBO:0000243" fbc:id="G_PA1287" fbc:name="G_PA1287" fbc:label="G_PA1287">
+      <fbc:geneProduct metaid="G_PA2826" sboTerm="SBO:0000243" fbc:id="G_PA2826" fbc:name="G_PA2826" fbc:label="G_PA2826">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158393,11 +167996,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1287">
+            <rdf:Description rdf:about="#G_PA2826">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043222"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043222"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158425,7 +168028,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1338" sboTerm="SBO:0000243" fbc:id="G_PA1338" fbc:name="G_PA1338" fbc:label="G_PA1338">
+      <fbc:geneProduct metaid="G_PA0361" sboTerm="SBO:0000243" fbc:id="G_PA0361" fbc:name="G_PA0361" fbc:label="G_PA0361">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158433,18 +168036,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1338">
+            <rdf:Description rdf:about="#G_PA0361">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041905"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P18956"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10374"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0361" sboTerm="SBO:0000243" fbc:id="G_PA0361" fbc:name="G_PA0361" fbc:label="G_PA0361">
+      <fbc:geneProduct metaid="G_PA1338" sboTerm="SBO:0000243" fbc:id="G_PA1338" fbc:name="G_PA1338" fbc:label="G_PA1338">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158452,14 +168058,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0361">
+            <rdf:Description rdf:about="#G_PA1338">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011257"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P18956"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041905"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158648,7 +168251,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0338" sboTerm="SBO:0000243" fbc:id="G_PA0338" fbc:name="G_PA0338" fbc:label="G_PA0338">
+      <fbc:geneProduct metaid="G_PA1433" sboTerm="SBO:0000243" fbc:id="G_PA1433" fbc:name="G_PA1433" fbc:label="G_PA1433">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158656,18 +168259,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0338">
+            <rdf:Description rdf:about="#G_PA1433">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043688"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1433" sboTerm="SBO:0000243" fbc:id="G_PA1433" fbc:name="G_PA1433" fbc:label="G_PA1433">
+      <fbc:geneProduct metaid="G_PA1120" sboTerm="SBO:0000243" fbc:id="G_PA1120" fbc:name="G_PA1120" fbc:label="G_PA1120">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158675,11 +168278,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1433">
+            <rdf:Description rdf:about="#G_PA1120">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158705,7 +168308,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1120" sboTerm="SBO:0000243" fbc:id="G_PA1120" fbc:name="G_PA1120" fbc:label="G_PA1120">
+      <fbc:geneProduct metaid="G_PA0338" sboTerm="SBO:0000243" fbc:id="G_PA0338" fbc:name="G_PA0338" fbc:label="G_PA0338">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158713,11 +168316,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1120">
+            <rdf:Description rdf:about="#G_PA0338">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -158794,7 +168397,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1507" sboTerm="SBO:0000243" fbc:id="G_PA1507" fbc:name="G_PA1507" fbc:label="G_PA1507">
+      <fbc:geneProduct metaid="G_PA1519" sboTerm="SBO:0000243" fbc:id="G_PA1519" fbc:name="G_PA1519" fbc:label="G_PA1519">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158802,18 +168405,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1507">
+            <rdf:Description rdf:about="#G_PA1519">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044702"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1519" sboTerm="SBO:0000243" fbc:id="G_PA1519" fbc:name="G_PA1519" fbc:label="G_PA1519">
+      <fbc:geneProduct metaid="G_PA1507" sboTerm="SBO:0000243" fbc:id="G_PA1507" fbc:name="G_PA1507" fbc:label="G_PA1507">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -158821,11 +168424,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1519">
+            <rdf:Description rdf:about="#G_PA1507">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044702"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047014"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159234,6 +168837,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4122" sboTerm="SBO:0000243" fbc:id="G_PA4122" fbc:name="G_PA4122" fbc:label="G_PA4122">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4121" sboTerm="SBO:0000243" fbc:id="G_PA4121" fbc:name="G_PA4121" fbc:label="G_PA4121">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159241,12 +168851,56 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4122" sboTerm="SBO:0000243" fbc:id="G_PA4122" fbc:name="G_PA4122" fbc:label="G_PA4122">
+      <fbc:geneProduct metaid="G_PA2199" sboTerm="SBO:0000243" fbc:id="G_PA2199" fbc:name="G_PA2199" fbc:label="G_PA2199">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2199">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34969"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1576" sboTerm="SBO:0000243" fbc:id="G_PA1576" fbc:name="G_PA1576" fbc:label="G_PA1576">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1576">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34948"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0743" sboTerm="SBO:0000243" fbc:id="G_PA0743" fbc:name="G_PA0743" fbc:label="G_PA0743">
         <notes>
@@ -159424,27 +169078,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0846" sboTerm="SBO:0000243" fbc:id="G_PA0846" fbc:name="G_PA0846" fbc:label="G_PA0846">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0846">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007953"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10003"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3975" sboTerm="SBO:0000243" fbc:id="G_PA3975" fbc:name="G_PA3975" fbc:label="G_PA3975">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159464,7 +169097,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2603" sboTerm="SBO:0000243" fbc:id="G_PA2603" fbc:name="G_PA2603" fbc:label="G_PA2603">
+      <fbc:geneProduct metaid="G_PA0846" sboTerm="SBO:0000243" fbc:id="G_PA0846" fbc:name="G_PA0846" fbc:label="G_PA0846">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159472,13 +169105,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2603">
+            <rdf:Description rdf:about="#G_PA0846">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18C56"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18C56"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10003"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159528,32 +169161,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1576" sboTerm="SBO:0000243" fbc:id="G_PA1576" fbc:name="G_PA1576" fbc:label="G_PA1576">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1576">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002204"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013328"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029154"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13328"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34948"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4728" sboTerm="SBO:0000243" fbc:id="G_PA4728" fbc:name="G_PA4728" fbc:label="G_PA4728">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159670,13 +169277,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2159" sboTerm="SBO:0000243" fbc:id="G_PA2159" fbc:name="G_PA2159" fbc:label="G_PA2159">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0389" sboTerm="SBO:0000243" fbc:id="G_PA0389" fbc:name="G_PA0389" fbc:label="G_PA0389">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159696,6 +169296,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2159" sboTerm="SBO:0000243" fbc:id="G_PA2159" fbc:name="G_PA2159" fbc:label="G_PA2159">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5495" sboTerm="SBO:0000243" fbc:id="G_PA5495" fbc:name="G_PA5495" fbc:label="G_PA5495">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159759,26 +169366,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1524" sboTerm="SBO:0000243" fbc:id="G_PA1524" fbc:name="G_PA1524" fbc:label="G_PA1524">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1524">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045211"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4618" sboTerm="SBO:0000243" fbc:id="G_PA4618" fbc:name="G_PA4618" fbc:label="G_PA4618">
+      <fbc:geneProduct metaid="G_PA1931" sboTerm="SBO:0000243" fbc:id="G_PA1931" fbc:name="G_PA1931" fbc:label="G_PA1931">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159786,13 +169374,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4618">
+            <rdf:Description rdf:about="#G_PA1931">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003777"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027051"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13992"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188F6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188F6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32143"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159818,7 +169415,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1931" sboTerm="SBO:0000243" fbc:id="G_PA1931" fbc:name="G_PA1931" fbc:label="G_PA1931">
+      <fbc:geneProduct metaid="G_PA4618" sboTerm="SBO:0000243" fbc:id="G_PA4618" fbc:name="G_PA4618" fbc:label="G_PA4618">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -159826,22 +169423,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1931">
+            <rdf:Description rdf:about="#G_PA4618">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q188F6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q188F6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017611"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003777"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32147"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -159881,6 +169469,43 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1524" sboTerm="SBO:0000243" fbc:id="G_PA1524" fbc:name="G_PA1524" fbc:label="G_PA1524">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1524">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045211"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045211"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4883" sboTerm="SBO:0000243" fbc:id="G_PA4883" fbc:name="G_PA4883" fbc:label="G_PA4883">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4883">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898931"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2623" sboTerm="SBO:0000243" fbc:id="G_PA2623" fbc:name="G_PA2623" fbc:label="G_PA2623">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159942,13 +169567,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1902" sboTerm="SBO:0000243" fbc:id="G_PA1902" fbc:name="G_PA1902" fbc:label="G_PA1902">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4213" sboTerm="SBO:0000243" fbc:id="G_PA4213" fbc:name="G_PA4213" fbc:label="G_PA4213">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -159982,6 +169600,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1902" sboTerm="SBO:0000243" fbc:id="G_PA1902" fbc:name="G_PA1902" fbc:label="G_PA1902">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2634" sboTerm="SBO:0000243" fbc:id="G_PA2634" fbc:name="G_PA2634" fbc:label="G_PA2634">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160008,6 +169633,32 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3152" sboTerm="SBO:0000243" fbc:id="G_PA3152" fbc:name="G_PA3152" fbc:label="G_PA3152">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5140" sboTerm="SBO:0000243" fbc:id="G_PA5140" fbc:name="G_PA5140" fbc:label="G_PA5140">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA5140">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043980"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3151" sboTerm="SBO:0000243" fbc:id="G_PA3151" fbc:name="G_PA3151" fbc:label="G_PA3151">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160040,25 +169691,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5140" sboTerm="SBO:0000243" fbc:id="G_PA5140" fbc:name="G_PA5140" fbc:label="G_PA5140">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5140">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043980"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043980"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5142" sboTerm="SBO:0000243" fbc:id="G_PA5142" fbc:name="G_PA5142" fbc:label="G_PA5142">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160078,13 +169710,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3152" sboTerm="SBO:0000243" fbc:id="G_PA3152" fbc:name="G_PA3152" fbc:label="G_PA3152">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5143" sboTerm="SBO:0000243" fbc:id="G_PA5143" fbc:name="G_PA5143" fbc:label="G_PA5143">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160170,7 +169795,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1590" sboTerm="SBO:0000243" fbc:id="G_PA1590" fbc:name="G_PA1590" fbc:label="G_PA1590">
+      <fbc:geneProduct metaid="G_PA1971" sboTerm="SBO:0000243" fbc:id="G_PA1971" fbc:name="G_PA1971" fbc:label="G_PA1971">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160178,23 +169803,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1590">
+            <rdf:Description rdf:about="#G_PA1971">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001394"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD99"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12168"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004685"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK50"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042407"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1971" sboTerm="SBO:0000243" fbc:id="G_PA1971" fbc:name="G_PA1971" fbc:label="G_PA1971">
+      <fbc:geneProduct metaid="G_PA1590" sboTerm="SBO:0000243" fbc:id="G_PA1590" fbc:name="G_PA1590" fbc:label="G_PA1590">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160202,17 +169822,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1971">
+            <rdf:Description rdf:about="#G_PA1590">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042407"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD99"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK50"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176017"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0250" sboTerm="SBO:0000243" fbc:id="G_PA0250" fbc:name="G_PA0250" fbc:label="G_PA0250">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3770" sboTerm="SBO:0000243" fbc:id="G_PA3770" fbc:name="G_PA3770" fbc:label="G_PA3770">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160232,13 +169864,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0250" sboTerm="SBO:0000243" fbc:id="G_PA0250" fbc:name="G_PA0250" fbc:label="G_PA0250">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1735" sboTerm="SBO:0000243" fbc:id="G_PA1735" fbc:name="G_PA1735" fbc:label="G_PA1735">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160609,7 +170234,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1635" sboTerm="SBO:0000243" fbc:id="G_PA1635" fbc:name="G_PA1635" fbc:label="G_PA1635">
+      <fbc:geneProduct metaid="G_PA1634" sboTerm="SBO:0000243" fbc:id="G_PA1634" fbc:name="G_PA1634" fbc:label="G_PA1634">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160617,25 +170242,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1635">
+            <rdf:Description rdf:about="#G_PA1634">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042354"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042357"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1636" sboTerm="SBO:0000243" fbc:id="G_PA1636" fbc:name="G_PA1636" fbc:label="G_PA1636">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1634" sboTerm="SBO:0000243" fbc:id="G_PA1634" fbc:name="G_PA1634" fbc:label="G_PA1634">
+      <fbc:geneProduct metaid="G_PA1635" sboTerm="SBO:0000243" fbc:id="G_PA1635" fbc:name="G_PA1635" fbc:label="G_PA1635">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160643,10 +170260,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1634">
+            <rdf:Description rdf:about="#G_PA1635">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042357"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042354"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160672,6 +170290,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1636" sboTerm="SBO:0000243" fbc:id="G_PA1636" fbc:name="G_PA1636" fbc:label="G_PA1636">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1496" sboTerm="SBO:0000243" fbc:id="G_PA1496" fbc:name="G_PA1496" fbc:label="G_PA1496">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -160696,7 +170321,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3210" sboTerm="SBO:0000243" fbc:id="G_PA3210" fbc:name="G_PA3210" fbc:label="G_PA3210">
+      <fbc:geneProduct metaid="G_PA0917" sboTerm="SBO:0000243" fbc:id="G_PA0917" fbc:name="G_PA0917" fbc:label="G_PA0917">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160704,11 +170329,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3210">
+            <rdf:Description rdf:about="#G_PA0917">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046350"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046350"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045903"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160734,7 +170359,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0917" sboTerm="SBO:0000243" fbc:id="G_PA0917" fbc:name="G_PA0917" fbc:label="G_PA0917">
+      <fbc:geneProduct metaid="G_PA3210" sboTerm="SBO:0000243" fbc:id="G_PA3210" fbc:name="G_PA3210" fbc:label="G_PA3210">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160742,11 +170367,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0917">
+            <rdf:Description rdf:about="#G_PA3210">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045903"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046350"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046350"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -160774,14 +170399,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5529" sboTerm="SBO:0000243" fbc:id="G_PA5529" fbc:name="G_PA5529" fbc:label="G_PA5529">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1058" sboTerm="SBO:0000243" fbc:id="G_PA1058" fbc:name="G_PA1058" fbc:label="G_PA1058">
+      <fbc:geneProduct metaid="G_PA1054" sboTerm="SBO:0000243" fbc:id="G_PA1054" fbc:name="G_PA1054" fbc:label="G_PA1054">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160789,18 +170407,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1058">
+            <rdf:Description rdf:about="#G_PA1054">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045097"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5518" sboTerm="SBO:0000243" fbc:id="G_PA5518" fbc:name="G_PA5518" fbc:label="G_PA5518">
+      <fbc:geneProduct metaid="G_PA3573" sboTerm="SBO:0000243" fbc:id="G_PA3573" fbc:name="G_PA3573" fbc:label="G_PA3573">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160808,21 +170426,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5518">
+            <rdf:Description rdf:about="#G_PA3573">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004771"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK01"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFQ6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176883"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3573" sboTerm="SBO:0000243" fbc:id="G_PA3573" fbc:name="G_PA3573" fbc:label="G_PA3573">
+      <fbc:geneProduct metaid="G_PA5529" sboTerm="SBO:0000243" fbc:id="G_PA5529" fbc:name="G_PA5529" fbc:label="G_PA5529">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1055" sboTerm="SBO:0000243" fbc:id="G_PA1055" fbc:name="G_PA1055" fbc:label="G_PA1055">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160830,22 +170456,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3573">
+            <rdf:Description rdf:about="#G_PA1055">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFQ6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045096"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1059" sboTerm="SBO:0000243" fbc:id="G_PA1059" fbc:name="G_PA1059" fbc:label="G_PA1059">
+      <fbc:geneProduct metaid="G_PA1056" sboTerm="SBO:0000243" fbc:id="G_PA1056" fbc:name="G_PA1056" fbc:label="G_PA1056">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160853,18 +170475,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1059">
+            <rdf:Description rdf:about="#G_PA1056">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045091"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045095"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1054" sboTerm="SBO:0000243" fbc:id="G_PA1054" fbc:name="G_PA1054" fbc:label="G_PA1054">
+      <fbc:geneProduct metaid="G_PA1058" sboTerm="SBO:0000243" fbc:id="G_PA1058" fbc:name="G_PA1058" fbc:label="G_PA1058">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160872,18 +170494,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1054">
+            <rdf:Description rdf:about="#G_PA1058">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045093"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1057" sboTerm="SBO:0000243" fbc:id="G_PA1057" fbc:name="G_PA1057" fbc:label="G_PA1057">
+      <fbc:geneProduct metaid="G_PA1059" sboTerm="SBO:0000243" fbc:id="G_PA1059" fbc:name="G_PA1059" fbc:label="G_PA1059">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160891,18 +170513,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1057">
+            <rdf:Description rdf:about="#G_PA1059">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045091"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1207" sboTerm="SBO:0000243" fbc:id="G_PA1207" fbc:name="G_PA1207" fbc:label="G_PA1207">
+      <fbc:geneProduct metaid="G_PA5021" sboTerm="SBO:0000243" fbc:id="G_PA5021" fbc:name="G_PA5021" fbc:label="G_PA5021">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160910,18 +170532,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1207">
+            <rdf:Description rdf:about="#G_PA5021">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042351"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1055" sboTerm="SBO:0000243" fbc:id="G_PA1055" fbc:name="G_PA1055" fbc:label="G_PA1055">
+      <fbc:geneProduct metaid="G_PA5518" sboTerm="SBO:0000243" fbc:id="G_PA5518" fbc:name="G_PA5518" fbc:label="G_PA5518">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160929,18 +170551,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1055">
+            <rdf:Description rdf:about="#G_PA5518">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK01"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175913"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5021" sboTerm="SBO:0000243" fbc:id="G_PA5021" fbc:name="G_PA5021" fbc:label="G_PA5021">
+      <fbc:geneProduct metaid="G_PA1207" sboTerm="SBO:0000243" fbc:id="G_PA1207" fbc:name="G_PA1207" fbc:label="G_PA1207">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160948,18 +170573,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5021">
+            <rdf:Description rdf:about="#G_PA1207">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042351"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1056" sboTerm="SBO:0000243" fbc:id="G_PA1056" fbc:name="G_PA1056" fbc:label="G_PA1056">
+      <fbc:geneProduct metaid="G_PA1057" sboTerm="SBO:0000243" fbc:id="G_PA1057" fbc:name="G_PA1057" fbc:label="G_PA1057">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -160967,11 +170592,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1056">
+            <rdf:Description rdf:about="#G_PA1057">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045094"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161167,13 +170792,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0074" sboTerm="SBO:0000243" fbc:id="G_PA0074" fbc:name="G_PA0074" fbc:label="G_PA0074">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1089" sboTerm="SBO:0000243" fbc:id="G_PA1089" fbc:name="G_PA1089" fbc:label="G_PA1089">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -161196,7 +170814,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1346" sboTerm="SBO:0000243" fbc:id="G_PA1346" fbc:name="G_PA1346" fbc:label="G_PA1346">
+      <fbc:geneProduct metaid="G_PA0074" sboTerm="SBO:0000243" fbc:id="G_PA0074" fbc:name="G_PA0074" fbc:label="G_PA0074">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1818" sboTerm="SBO:0000243" fbc:id="G_PA1818" fbc:name="G_PA1818" fbc:label="G_PA1818">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161204,13 +170829,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1346">
+            <rdf:Description rdf:about="#G_PA1818">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944887"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042427"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161244,7 +170866,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1818" sboTerm="SBO:0000243" fbc:id="G_PA1818" fbc:name="G_PA1818" fbc:label="G_PA1818">
+      <fbc:geneProduct metaid="G_PA1346" sboTerm="SBO:0000243" fbc:id="G_PA1346" fbc:name="G_PA1346" fbc:label="G_PA1346">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161252,10 +170874,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1818">
+            <rdf:Description rdf:about="#G_PA1346">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P52095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13219"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161290,21 +170915,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2916" sboTerm="SBO:0000243" fbc:id="G_PA2916" fbc:name="G_PA2916" fbc:label="G_PA2916">
+      <fbc:geneProduct metaid="G_PA4145a" sboTerm="SBO:0000243" fbc:id="G_PA4145a" fbc:name="G_PA4145a" fbc:label="G_PA4145a">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4145a" sboTerm="SBO:0000243" fbc:id="G_PA4145a" fbc:name="G_PA4145a" fbc:label="G_PA4145a">
+      <fbc:geneProduct metaid="G_PA2916" sboTerm="SBO:0000243" fbc:id="G_PA2916" fbc:name="G_PA2916" fbc:label="G_PA2916">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0473" sboTerm="SBO:0000243" fbc:id="G_PA0473" fbc:name="G_PA0473" fbc:label="G_PA0473">
+      <fbc:geneProduct metaid="G_PA2007" sboTerm="SBO:0000243" fbc:id="G_PA2007" fbc:name="G_PA2007" fbc:label="G_PA2007">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161312,10 +170937,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0473">
+            <rdf:Description rdf:about="#G_PA2007">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100764455"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041608"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161386,7 +171012,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2007" sboTerm="SBO:0000243" fbc:id="G_PA2007" fbc:name="G_PA2007" fbc:label="G_PA2007">
+      <fbc:geneProduct metaid="G_PA2473" sboTerm="SBO:0000243" fbc:id="G_PA2473" fbc:name="G_PA2473" fbc:label="G_PA2473">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0473" sboTerm="SBO:0000243" fbc:id="G_PA0473" fbc:name="G_PA0473" fbc:label="G_PA0473">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161394,24 +171027,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2007">
+            <rdf:Description rdf:about="#G_PA0473">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100764455"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2473" sboTerm="SBO:0000243" fbc:id="G_PA2473" fbc:name="G_PA2473" fbc:label="G_PA2473">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2152" sboTerm="SBO:0000243" fbc:id="G_PA2152" fbc:name="G_PA2152" fbc:label="G_PA2152">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -161508,7 +171133,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0597" sboTerm="SBO:0000243" fbc:id="G_PA0597" fbc:name="G_PA0597" fbc:label="G_PA0597">
+      <fbc:geneProduct metaid="G_PA3551" sboTerm="SBO:0000243" fbc:id="G_PA3551" fbc:name="G_PA3551" fbc:label="G_PA3551">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161516,20 +171141,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0597">
+            <rdf:Description rdf:about="#G_PA3551">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100760573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/331026"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS23515.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043792"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2232" sboTerm="SBO:0000243" fbc:id="G_PA2232" fbc:name="G_PA2232" fbc:label="G_PA2232">
+      <fbc:geneProduct metaid="G_PA0597" sboTerm="SBO:0000243" fbc:id="G_PA0597" fbc:name="G_PA0597" fbc:label="G_PA0597">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161537,18 +171160,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2232">
+            <rdf:Description rdf:about="#G_PA0597">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043340"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100760573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/331026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS23515.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3551" sboTerm="SBO:0000243" fbc:id="G_PA3551" fbc:name="G_PA3551" fbc:label="G_PA3551">
+      <fbc:geneProduct metaid="G_PA2232" sboTerm="SBO:0000243" fbc:id="G_PA2232" fbc:name="G_PA2232" fbc:label="G_PA2232">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161556,11 +171181,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3551">
+            <rdf:Description rdf:about="#G_PA2232">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043792"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043340"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161588,13 +171213,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2330" sboTerm="SBO:0000243" fbc:id="G_PA2330" fbc:name="G_PA2330" fbc:label="G_PA2330">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2015" sboTerm="SBO:0000243" fbc:id="G_PA2015" fbc:name="G_PA2015" fbc:label="G_PA2015">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -161614,7 +171232,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2014" sboTerm="SBO:0000243" fbc:id="G_PA2014" fbc:name="G_PA2014" fbc:label="G_PA2014">
+      <fbc:geneProduct metaid="G_PA2330" sboTerm="SBO:0000243" fbc:id="G_PA2330" fbc:name="G_PA2330" fbc:label="G_PA2330">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4226" sboTerm="SBO:0000243" fbc:id="G_PA4226" fbc:name="G_PA4226" fbc:label="G_PA4226">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161622,11 +171247,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2014">
+            <rdf:Description rdf:about="#G_PA4226">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885838"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161652,7 +171276,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0792" sboTerm="SBO:0000243" fbc:id="G_PA0792" fbc:name="G_PA0792" fbc:label="G_PA0792">
+      <fbc:geneProduct metaid="G_PA2014" sboTerm="SBO:0000243" fbc:id="G_PA2014" fbc:name="G_PA2014" fbc:label="G_PA2014">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161660,11 +171284,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0792">
+            <rdf:Description rdf:about="#G_PA2014">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045337"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161689,6 +171313,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0792" sboTerm="SBO:0000243" fbc:id="G_PA0792" fbc:name="G_PA0792" fbc:label="G_PA0792">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0792">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045337"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0796" sboTerm="SBO:0000243" fbc:id="G_PA0796" fbc:name="G_PA0796" fbc:label="G_PA0796">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -161753,7 +171396,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4003" sboTerm="SBO:0000243" fbc:id="G_PA4003" fbc:name="G_PA4003" fbc:label="G_PA4003">
+      <fbc:geneProduct metaid="G_PA5045" sboTerm="SBO:0000243" fbc:id="G_PA5045" fbc:name="G_PA5045" fbc:label="G_PA5045">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161761,18 +171404,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4003">
+            <rdf:Description rdf:about="#G_PA5045">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041858"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045110"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5045" sboTerm="SBO:0000243" fbc:id="G_PA5045" fbc:name="G_PA5045" fbc:label="G_PA5045">
+      <fbc:geneProduct metaid="G_PA0788" sboTerm="SBO:0000243" fbc:id="G_PA0788" fbc:name="G_PA0788" fbc:label="G_PA0788">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161780,18 +171423,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5045">
+            <rdf:Description rdf:about="#G_PA0788">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045110"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000516"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10605"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4700" sboTerm="SBO:0000243" fbc:id="G_PA4700" fbc:name="G_PA4700" fbc:label="G_PA4700">
+      <fbc:geneProduct metaid="G_PA4003" sboTerm="SBO:0000243" fbc:id="G_PA4003" fbc:name="G_PA4003" fbc:label="G_PA4003">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161799,18 +171444,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4700">
+            <rdf:Description rdf:about="#G_PA4003">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044197"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041858"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0788" sboTerm="SBO:0000243" fbc:id="G_PA0788" fbc:name="G_PA0788" fbc:label="G_PA0788">
+      <fbc:geneProduct metaid="G_PA4700" sboTerm="SBO:0000243" fbc:id="G_PA4700" fbc:name="G_PA4700" fbc:label="G_PA4700">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161818,13 +171463,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0788">
+            <rdf:Description rdf:about="#G_PA4700">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000516"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044197"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161883,7 +171526,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3047" sboTerm="SBO:0000243" fbc:id="G_PA3047" fbc:name="G_PA3047" fbc:label="G_PA3047">
+      <fbc:geneProduct metaid="G_PA2315" sboTerm="SBO:0000243" fbc:id="G_PA2315" fbc:name="G_PA2315" fbc:label="G_PA2315">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161891,11 +171534,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3047">
+            <rdf:Description rdf:about="#G_PA2315">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77619"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946907"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14164"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -161921,7 +171566,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1797" sboTerm="SBO:0000243" fbc:id="G_PA1797" fbc:name="G_PA1797" fbc:label="G_PA1797">
+      <fbc:geneProduct metaid="G_PA3047" sboTerm="SBO:0000243" fbc:id="G_PA3047" fbc:name="G_PA3047" fbc:label="G_PA3047">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161929,20 +171574,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1797">
+            <rdf:Description rdf:about="#G_PA3047">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001292"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD70"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044950"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2315" sboTerm="SBO:0000243" fbc:id="G_PA2315" fbc:name="G_PA2315" fbc:label="G_PA2315">
+      <fbc:geneProduct metaid="G_PA1797" sboTerm="SBO:0000243" fbc:id="G_PA1797" fbc:name="G_PA1797" fbc:label="G_PA1797">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161950,20 +171593,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2315">
+            <rdf:Description rdf:about="#G_PA1797">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77619"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946907"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD70"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12867"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3472" sboTerm="SBO:0000243" fbc:id="G_PA3472" fbc:name="G_PA3472" fbc:label="G_PA3472">
+      <fbc:geneProduct metaid="G_PA0869" sboTerm="SBO:0000243" fbc:id="G_PA0869" fbc:name="G_PA0869" fbc:label="G_PA0869">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161971,20 +171614,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3472">
+            <rdf:Description rdf:about="#G_PA0869">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005533"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76190"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH74"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174025"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0869" sboTerm="SBO:0000243" fbc:id="G_PA0869" fbc:name="G_PA0869" fbc:label="G_PA0869">
+      <fbc:geneProduct metaid="G_PA3472" sboTerm="SBO:0000243" fbc:id="G_PA3472" fbc:name="G_PA3472" fbc:label="G_PA3472">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -161992,19 +171641,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0869">
+            <rdf:Description rdf:about="#G_PA3472">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007050"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76190"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13949"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162226,7 +171869,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2822" sboTerm="SBO:0000243" fbc:id="G_PA2822" fbc:name="G_PA2822" fbc:label="G_PA2822">
+      <fbc:geneProduct metaid="G_PA2477" sboTerm="SBO:0000243" fbc:id="G_PA2477" fbc:name="G_PA2477" fbc:label="G_PA2477">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162234,11 +171877,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2822">
+            <rdf:Description rdf:about="#G_PA2477">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGG4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11887"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162271,7 +171916,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2477" sboTerm="SBO:0000243" fbc:id="G_PA2477" fbc:name="G_PA2477" fbc:label="G_PA2477">
+      <fbc:geneProduct metaid="G_PA2822" sboTerm="SBO:0000243" fbc:id="G_PA2822" fbc:name="G_PA2822" fbc:label="G_PA2822">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162279,13 +171924,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2477">
+            <rdf:Description rdf:about="#G_PA2822">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGG4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162317,7 +171960,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2349" sboTerm="SBO:0000243" fbc:id="G_PA2349" fbc:name="G_PA2349" fbc:label="G_PA2349">
+      <fbc:geneProduct metaid="G_PA2351" sboTerm="SBO:0000243" fbc:id="G_PA2351" fbc:name="G_PA2351" fbc:label="G_PA2351">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162325,18 +171968,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2349">
+            <rdf:Description rdf:about="#G_PA2351">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043765"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043763"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5504" sboTerm="SBO:0000243" fbc:id="G_PA5504" fbc:name="G_PA5504" fbc:label="G_PA5504">
+      <fbc:geneProduct metaid="G_PA5503" sboTerm="SBO:0000243" fbc:id="G_PA5503" fbc:name="G_PA5503" fbc:label="G_PA5503">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162344,18 +171987,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5504">
+            <rdf:Description rdf:about="#G_PA5503">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043604"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2350" sboTerm="SBO:0000243" fbc:id="G_PA2350" fbc:name="G_PA2350" fbc:label="G_PA2350">
+      <fbc:geneProduct metaid="G_PA5504" sboTerm="SBO:0000243" fbc:id="G_PA5504" fbc:name="G_PA5504" fbc:label="G_PA5504">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162363,18 +172006,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2350">
+            <rdf:Description rdf:about="#G_PA5504">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043604"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2351" sboTerm="SBO:0000243" fbc:id="G_PA2351" fbc:name="G_PA2351" fbc:label="G_PA2351">
+      <fbc:geneProduct metaid="G_PA2349" sboTerm="SBO:0000243" fbc:id="G_PA2349" fbc:name="G_PA2349" fbc:label="G_PA2349">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162382,18 +172025,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2351">
+            <rdf:Description rdf:about="#G_PA2349">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043765"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043765"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5503" sboTerm="SBO:0000243" fbc:id="G_PA5503" fbc:name="G_PA5503" fbc:label="G_PA5503">
+      <fbc:geneProduct metaid="G_PA5505" sboTerm="SBO:0000243" fbc:id="G_PA5505" fbc:name="G_PA5505" fbc:label="G_PA5505">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162401,18 +172044,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5503">
+            <rdf:Description rdf:about="#G_PA5505">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043602"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043602"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5505" sboTerm="SBO:0000243" fbc:id="G_PA5505" fbc:name="G_PA5505" fbc:label="G_PA5505">
+      <fbc:geneProduct metaid="G_PA2350" sboTerm="SBO:0000243" fbc:id="G_PA2350" fbc:name="G_PA2350" fbc:label="G_PA2350">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162420,11 +172063,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5505">
+            <rdf:Description rdf:about="#G_PA2350">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043602"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043602"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043764"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162450,13 +172093,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4635" sboTerm="SBO:0000243" fbc:id="G_PA4635" fbc:name="G_PA4635" fbc:label="G_PA4635">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4825" sboTerm="SBO:0000243" fbc:id="G_PA4825" fbc:name="G_PA4825" fbc:label="G_PA4825">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -162484,6 +172120,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4635" sboTerm="SBO:0000243" fbc:id="G_PA4635" fbc:name="G_PA4635" fbc:label="G_PA4635">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2013" sboTerm="SBO:0000243" fbc:id="G_PA2013" fbc:name="G_PA2013" fbc:label="G_PA2013">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -162510,42 +172153,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0372" sboTerm="SBO:0000243" fbc:id="G_PA0372" fbc:name="G_PA0372" fbc:label="G_PA0372">
+      <fbc:geneProduct metaid="G_PA5047" sboTerm="SBO:0000243" fbc:id="G_PA5047" fbc:name="G_PA5047" fbc:label="G_PA5047">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5133" sboTerm="SBO:0000243" fbc:id="G_PA5133" fbc:name="G_PA5133" fbc:label="G_PA5133">
+      <fbc:geneProduct metaid="G_PA2973" sboTerm="SBO:0000243" fbc:id="G_PA2973" fbc:name="G_PA2973" fbc:label="G_PA2973">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4404" sboTerm="SBO:0000243" fbc:id="G_PA4404" fbc:name="G_PA4404" fbc:label="G_PA4404">
+      <fbc:geneProduct metaid="G_PA0372" sboTerm="SBO:0000243" fbc:id="G_PA0372" fbc:name="G_PA0372" fbc:label="G_PA0372">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0371" sboTerm="SBO:0000243" fbc:id="G_PA0371" fbc:name="G_PA0371" fbc:label="G_PA0371">
+      <fbc:geneProduct metaid="G_PA5133" sboTerm="SBO:0000243" fbc:id="G_PA5133" fbc:name="G_PA5133" fbc:label="G_PA5133">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2973" sboTerm="SBO:0000243" fbc:id="G_PA2973" fbc:name="G_PA2973" fbc:label="G_PA2973">
+      <fbc:geneProduct metaid="G_PA4404" sboTerm="SBO:0000243" fbc:id="G_PA4404" fbc:name="G_PA4404" fbc:label="G_PA4404">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5047" sboTerm="SBO:0000243" fbc:id="G_PA5047" fbc:name="G_PA5047" fbc:label="G_PA5047">
+      <fbc:geneProduct metaid="G_PA0371" sboTerm="SBO:0000243" fbc:id="G_PA0371" fbc:name="G_PA0371" fbc:label="G_PA0371">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162573,7 +172216,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3020" sboTerm="SBO:0000243" fbc:id="G_PA3020" fbc:name="G_PA3020" fbc:label="G_PA3020">
+      <fbc:geneProduct metaid="G_PA1222" sboTerm="SBO:0000243" fbc:id="G_PA1222" fbc:name="G_PA1222" fbc:label="G_PA1222">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162581,18 +172224,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3020">
+            <rdf:Description rdf:about="#G_PA1222">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044983"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044609"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3764" sboTerm="SBO:0000243" fbc:id="G_PA3764" fbc:name="G_PA3764" fbc:label="G_PA3764">
+      <fbc:geneProduct metaid="G_PA3020" sboTerm="SBO:0000243" fbc:id="G_PA3020" fbc:name="G_PA3020" fbc:label="G_PA3020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162600,20 +172243,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3764">
+            <rdf:Description rdf:about="#G_PA3020">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044983"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044983"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4001" sboTerm="SBO:0000243" fbc:id="G_PA4001" fbc:name="G_PA4001" fbc:label="G_PA4001">
+      <fbc:geneProduct metaid="G_PA1812" sboTerm="SBO:0000243" fbc:id="G_PA1812" fbc:name="G_PA1812" fbc:label="G_PA1812">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162621,11 +172262,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4001">
+            <rdf:Description rdf:about="#G_PA1812">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEZ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10246"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162653,7 +172296,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1222" sboTerm="SBO:0000243" fbc:id="G_PA1222" fbc:name="G_PA1222" fbc:label="G_PA1222">
+      <fbc:geneProduct metaid="G_PA4001" sboTerm="SBO:0000243" fbc:id="G_PA4001" fbc:name="G_PA4001" fbc:label="G_PA4001">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162661,18 +172304,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1222">
+            <rdf:Description rdf:about="#G_PA4001">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044609"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1812" sboTerm="SBO:0000243" fbc:id="G_PA1812" fbc:name="G_PA1812" fbc:label="G_PA1812">
+      <fbc:geneProduct metaid="G_PA3764" sboTerm="SBO:0000243" fbc:id="G_PA3764" fbc:name="G_PA3764" fbc:label="G_PA3764">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162680,13 +172323,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1812">
+            <rdf:Description rdf:about="#G_PA3764">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEZ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11373"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162717,7 +172360,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0130" sboTerm="SBO:0000243" fbc:id="G_PA0130" fbc:name="G_PA0130" fbc:label="G_PA0130">
+      <fbc:geneProduct metaid="G_PA0747" sboTerm="SBO:0000243" fbc:id="G_PA0747" fbc:name="G_PA0747" fbc:label="G_PA0747">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162725,18 +172368,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0130">
+            <rdf:Description rdf:about="#G_PA0747">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044408"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045894"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0747" sboTerm="SBO:0000243" fbc:id="G_PA0747" fbc:name="G_PA0747" fbc:label="G_PA0747">
+      <fbc:geneProduct metaid="G_PA0130" sboTerm="SBO:0000243" fbc:id="G_PA0130" fbc:name="G_PA0130" fbc:label="G_PA0130">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162744,11 +172387,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0747">
+            <rdf:Description rdf:about="#G_PA0130">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045894"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044408"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162798,7 +172441,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2407" sboTerm="SBO:0000243" fbc:id="G_PA2407" fbc:name="G_PA2407" fbc:label="G_PA2407">
+      <fbc:geneProduct metaid="G_PA2408" sboTerm="SBO:0000243" fbc:id="G_PA2408" fbc:name="G_PA2408" fbc:label="G_PA2408">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162806,18 +172449,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2407">
+            <rdf:Description rdf:about="#G_PA2408">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046766"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046763"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2408" sboTerm="SBO:0000243" fbc:id="G_PA2408" fbc:name="G_PA2408" fbc:label="G_PA2408">
+      <fbc:geneProduct metaid="G_PA2407" sboTerm="SBO:0000243" fbc:id="G_PA2407" fbc:name="G_PA2407" fbc:label="G_PA2407">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -162825,11 +172468,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2408">
+            <rdf:Description rdf:about="#G_PA2407">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046766"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -162862,13 +172505,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3441" sboTerm="SBO:0000243" fbc:id="G_PA3441" fbc:name="G_PA3441" fbc:label="G_PA3441">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1861" sboTerm="SBO:0000243" fbc:id="G_PA1861" fbc:name="G_PA1861" fbc:label="G_PA1861">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -162888,24 +172524,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1862" sboTerm="SBO:0000243" fbc:id="G_PA1862" fbc:name="G_PA1862" fbc:label="G_PA1862">
+      <fbc:geneProduct metaid="G_PA3441" sboTerm="SBO:0000243" fbc:id="G_PA3441" fbc:name="G_PA3441" fbc:label="G_PA3441">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1862">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3253" sboTerm="SBO:0000243" fbc:id="G_PA3253" fbc:name="G_PA3253" fbc:label="G_PA3253">
         <notes>
@@ -162948,6 +172572,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1862" sboTerm="SBO:0000243" fbc:id="G_PA1862" fbc:name="G_PA1862" fbc:label="G_PA1862">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1862">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4729" sboTerm="SBO:0000243" fbc:id="G_PA4729" fbc:name="G_PA4729" fbc:label="G_PA4729">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -163028,7 +172671,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4002" sboTerm="SBO:0000243" fbc:id="G_PA4002" fbc:name="G_PA4002" fbc:label="G_PA4002">
+      <fbc:geneProduct metaid="G_PA4562" sboTerm="SBO:0000243" fbc:id="G_PA4562" fbc:name="G_PA4562" fbc:label="G_PA4562">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163036,13 +172679,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4002">
+            <rdf:Description rdf:about="#G_PA4562">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000320"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABG4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044415"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044415"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003630"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF16"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13880"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163087,7 +172732,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4562" sboTerm="SBO:0000243" fbc:id="G_PA4562" fbc:name="G_PA4562" fbc:label="G_PA4562">
+      <fbc:geneProduct metaid="G_PA4002" sboTerm="SBO:0000243" fbc:id="G_PA4002" fbc:name="G_PA4002" fbc:label="G_PA4002">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163095,15 +172740,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4562">
+            <rdf:Description rdf:about="#G_PA4002">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044415"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044415"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003630"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF16"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABG4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10344"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163238,7 +172881,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4126" sboTerm="SBO:0000243" fbc:id="G_PA4126" fbc:name="G_PA4126" fbc:label="G_PA4126">
+      <fbc:geneProduct metaid="G_PA1601" sboTerm="SBO:0000243" fbc:id="G_PA1601" fbc:name="G_PA1601" fbc:label="G_PA1601">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163246,18 +172889,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4126">
+            <rdf:Description rdf:about="#G_PA1601">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046625"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046616"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2213" sboTerm="SBO:0000243" fbc:id="G_PA2213" fbc:name="G_PA2213" fbc:label="G_PA2213">
+      <fbc:geneProduct metaid="G_PA1602" sboTerm="SBO:0000243" fbc:id="G_PA1602" fbc:name="G_PA1602" fbc:label="G_PA1602">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163265,18 +172908,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2213">
+            <rdf:Description rdf:about="#G_PA1602">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046626"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046617"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3251" sboTerm="SBO:0000243" fbc:id="G_PA3251" fbc:name="G_PA3251" fbc:label="G_PA3251">
+      <fbc:geneProduct metaid="G_PA1823" sboTerm="SBO:0000243" fbc:id="G_PA1823" fbc:name="G_PA1823" fbc:label="G_PA1823">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163284,22 +172927,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3251">
+            <rdf:Description rdf:about="#G_PA1823">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017849"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024873"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180R2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180R2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042077"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1823" sboTerm="SBO:0000243" fbc:id="G_PA1823" fbc:name="G_PA1823" fbc:label="G_PA1823">
+      <fbc:geneProduct metaid="G_PA3251" sboTerm="SBO:0000243" fbc:id="G_PA3251" fbc:name="G_PA3251" fbc:label="G_PA3251">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163307,11 +172946,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1823">
+            <rdf:Description rdf:about="#G_PA3251">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042077"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180R2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180R2"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163339,13 +172982,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2691" sboTerm="SBO:0000243" fbc:id="G_PA2691" fbc:name="G_PA2691" fbc:label="G_PA2691">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0949" sboTerm="SBO:0000243" fbc:id="G_PA0949" fbc:name="G_PA0949" fbc:label="G_PA0949">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -163367,6 +173003,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2691" sboTerm="SBO:0000243" fbc:id="G_PA2691" fbc:name="G_PA2691" fbc:label="G_PA2691">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1204" sboTerm="SBO:0000243" fbc:id="G_PA1204" fbc:name="G_PA1204" fbc:label="G_PA1204">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -163388,7 +173031,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1883" sboTerm="SBO:0000243" fbc:id="G_PA1883" fbc:name="G_PA1883" fbc:label="G_PA1883">
+      <fbc:geneProduct metaid="G_PA2645" sboTerm="SBO:0000243" fbc:id="G_PA2645" fbc:name="G_PA2645" fbc:label="G_PA2645">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163396,23 +173039,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1883">
+            <rdf:Description rdf:about="#G_PA2645">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDX2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042270"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2637" sboTerm="SBO:0000243" fbc:id="G_PA2637" fbc:name="G_PA2637" fbc:label="G_PA2637">
+      <fbc:geneProduct metaid="G_PA2638" sboTerm="SBO:0000243" fbc:id="G_PA2638" fbc:name="G_PA2638" fbc:label="G_PA2638">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163420,18 +173058,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2637">
+            <rdf:Description rdf:about="#G_PA2638">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2644" sboTerm="SBO:0000243" fbc:id="G_PA2644" fbc:name="G_PA2644" fbc:label="G_PA2644">
+      <fbc:geneProduct metaid="G_PA2649" sboTerm="SBO:0000243" fbc:id="G_PA2649" fbc:name="G_PA2649" fbc:label="G_PA2649">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163439,18 +173077,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2644">
+            <rdf:Description rdf:about="#G_PA2649">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2640" sboTerm="SBO:0000243" fbc:id="G_PA2640" fbc:name="G_PA2640" fbc:label="G_PA2640">
+      <fbc:geneProduct metaid="G_PA2641" sboTerm="SBO:0000243" fbc:id="G_PA2641" fbc:name="G_PA2641" fbc:label="G_PA2641">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163458,18 +173096,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2640">
+            <rdf:Description rdf:about="#G_PA2641">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2646" sboTerm="SBO:0000243" fbc:id="G_PA2646" fbc:name="G_PA2646" fbc:label="G_PA2646">
+      <fbc:geneProduct metaid="G_PA2644" sboTerm="SBO:0000243" fbc:id="G_PA2644" fbc:name="G_PA2644" fbc:label="G_PA2644">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163477,18 +173115,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2646">
+            <rdf:Description rdf:about="#G_PA2644">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042277"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2639" sboTerm="SBO:0000243" fbc:id="G_PA2639" fbc:name="G_PA2639" fbc:label="G_PA2639">
+      <fbc:geneProduct metaid="G_PA2642" sboTerm="SBO:0000243" fbc:id="G_PA2642" fbc:name="G_PA2642" fbc:label="G_PA2642">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163496,24 +173134,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2639">
+            <rdf:Description rdf:about="#G_PA2642">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001268"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010218"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ92"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042269"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2643" sboTerm="SBO:0000243" fbc:id="G_PA2643" fbc:name="G_PA2643" fbc:label="G_PA2643">
+      <fbc:geneProduct metaid="G_PA2639" sboTerm="SBO:0000243" fbc:id="G_PA2639" fbc:name="G_PA2639" fbc:label="G_PA2639">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163521,18 +173153,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2643">
+            <rdf:Description rdf:about="#G_PA2639">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ92"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175384"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2645" sboTerm="SBO:0000243" fbc:id="G_PA2645" fbc:name="G_PA2645" fbc:label="G_PA2645">
+      <fbc:geneProduct metaid="G_PA2643" sboTerm="SBO:0000243" fbc:id="G_PA2643" fbc:name="G_PA2643" fbc:label="G_PA2643">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163540,18 +173178,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2645">
+            <rdf:Description rdf:about="#G_PA2643">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2649" sboTerm="SBO:0000243" fbc:id="G_PA2649" fbc:name="G_PA2649" fbc:label="G_PA2649">
+      <fbc:geneProduct metaid="G_PA2637" sboTerm="SBO:0000243" fbc:id="G_PA2637" fbc:name="G_PA2637" fbc:label="G_PA2637">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163559,11 +173197,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2649">
+            <rdf:Description rdf:about="#G_PA2637">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163613,7 +173251,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2642" sboTerm="SBO:0000243" fbc:id="G_PA2642" fbc:name="G_PA2642" fbc:label="G_PA2642">
+      <fbc:geneProduct metaid="G_PA2640" sboTerm="SBO:0000243" fbc:id="G_PA2640" fbc:name="G_PA2640" fbc:label="G_PA2640">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163621,18 +173259,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2642">
+            <rdf:Description rdf:about="#G_PA2640">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042269"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042274"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2641" sboTerm="SBO:0000243" fbc:id="G_PA2641" fbc:name="G_PA2641" fbc:label="G_PA2641">
+      <fbc:geneProduct metaid="G_PA1883" sboTerm="SBO:0000243" fbc:id="G_PA1883" fbc:name="G_PA1883" fbc:label="G_PA1883">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163640,18 +173278,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2641">
+            <rdf:Description rdf:about="#G_PA1883">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDX2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175386"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2638" sboTerm="SBO:0000243" fbc:id="G_PA2638" fbc:name="G_PA2638" fbc:label="G_PA2638">
+      <fbc:geneProduct metaid="G_PA2646" sboTerm="SBO:0000243" fbc:id="G_PA2646" fbc:name="G_PA2646" fbc:label="G_PA2646">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163659,18 +173302,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2638">
+            <rdf:Description rdf:about="#G_PA2646">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4975" sboTerm="SBO:0000243" fbc:id="G_PA4975" fbc:name="G_PA4975" fbc:label="G_PA4975">
+      <fbc:geneProduct metaid="G_PA4538" sboTerm="SBO:0000243" fbc:id="G_PA4538" fbc:name="G_PA4538" fbc:label="G_PA4538">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163678,18 +173321,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4975">
+            <rdf:Description rdf:about="#G_PA4538">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044445"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4538" sboTerm="SBO:0000243" fbc:id="G_PA4538" fbc:name="G_PA4538" fbc:label="G_PA4538">
+      <fbc:geneProduct metaid="G_PA4975" sboTerm="SBO:0000243" fbc:id="G_PA4975" fbc:name="G_PA4975" fbc:label="G_PA4975">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163697,46 +173340,46 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4538">
+            <rdf:Description rdf:about="#G_PA4975">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044445"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044445"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046486"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2996" sboTerm="SBO:0000243" fbc:id="G_PA2996" fbc:name="G_PA2996" fbc:label="G_PA2996">
+      <fbc:geneProduct metaid="G_PA2999" sboTerm="SBO:0000243" fbc:id="G_PA2999" fbc:name="G_PA2999" fbc:label="G_PA2999">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2995" sboTerm="SBO:0000243" fbc:id="G_PA2995" fbc:name="G_PA2995" fbc:label="G_PA2995">
+      <fbc:geneProduct metaid="G_PA2996" sboTerm="SBO:0000243" fbc:id="G_PA2996" fbc:name="G_PA2996" fbc:label="G_PA2996">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2998" sboTerm="SBO:0000243" fbc:id="G_PA2998" fbc:name="G_PA2998" fbc:label="G_PA2998">
+      <fbc:geneProduct metaid="G_PA2997" sboTerm="SBO:0000243" fbc:id="G_PA2997" fbc:name="G_PA2997" fbc:label="G_PA2997">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2999" sboTerm="SBO:0000243" fbc:id="G_PA2999" fbc:name="G_PA2999" fbc:label="G_PA2999">
+      <fbc:geneProduct metaid="G_PA2995" sboTerm="SBO:0000243" fbc:id="G_PA2995" fbc:name="G_PA2995" fbc:label="G_PA2995">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2997" sboTerm="SBO:0000243" fbc:id="G_PA2997" fbc:name="G_PA2997" fbc:label="G_PA2997">
+      <fbc:geneProduct metaid="G_PA2998" sboTerm="SBO:0000243" fbc:id="G_PA2998" fbc:name="G_PA2998" fbc:label="G_PA2998">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163750,7 +173393,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0139" sboTerm="SBO:0000243" fbc:id="G_PA0139" fbc:name="G_PA0139" fbc:label="G_PA0139">
+      <fbc:geneProduct metaid="G_PA0140" sboTerm="SBO:0000243" fbc:id="G_PA0140" fbc:name="G_PA0140" fbc:label="G_PA0140">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163758,22 +173401,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0139">
+            <rdf:Description rdf:about="#G_PA0140">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE08"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0140" sboTerm="SBO:0000243" fbc:id="G_PA0140" fbc:name="G_PA0140" fbc:label="G_PA0140">
+      <fbc:geneProduct metaid="G_PA0139" sboTerm="SBO:0000243" fbc:id="G_PA0139" fbc:name="G_PA0139" fbc:label="G_PA0139">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163781,11 +173420,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0140">
+            <rdf:Description rdf:about="#G_PA0139">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AE08"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11384"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163832,7 +173475,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2680" sboTerm="SBO:0000243" fbc:id="G_PA2680" fbc:name="G_PA2680" fbc:label="G_PA2680">
+      <fbc:geneProduct metaid="G_PA2580" sboTerm="SBO:0000243" fbc:id="G_PA2580" fbc:name="G_PA2580" fbc:label="G_PA2580">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163840,18 +173483,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2680">
+            <rdf:Description rdf:about="#G_PA2580">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEY5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CGH8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173514"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0023" sboTerm="SBO:0000243" fbc:id="G_PA0023" fbc:name="G_PA0023" fbc:label="G_PA0023">
+      <fbc:geneProduct metaid="G_PA2680" sboTerm="SBO:0000243" fbc:id="G_PA2680" fbc:name="G_PA2680" fbc:label="G_PA2680">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163859,18 +173507,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0023">
+            <rdf:Description rdf:about="#G_PA2680">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045370"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2580" sboTerm="SBO:0000243" fbc:id="G_PA2580" fbc:name="G_PA2580" fbc:label="G_PA2580">
+      <fbc:geneProduct metaid="G_PA0023" sboTerm="SBO:0000243" fbc:id="G_PA0023" fbc:name="G_PA0023" fbc:label="G_PA0023">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163878,16 +173526,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2580">
+            <rdf:Description rdf:about="#G_PA0023">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009946"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEY5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947512"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003680"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CGH8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173514"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043553"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -163932,7 +173575,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0196" sboTerm="SBO:0000243" fbc:id="G_PA0196" fbc:name="G_PA0196" fbc:label="G_PA0196">
+      <fbc:geneProduct metaid="G_PA2991" sboTerm="SBO:0000243" fbc:id="G_PA2991" fbc:name="G_PA2991" fbc:label="G_PA2991">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163940,18 +173583,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0196">
+            <rdf:Description rdf:about="#G_PA2991">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045007"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2991" sboTerm="SBO:0000243" fbc:id="G_PA2991" fbc:name="G_PA2991" fbc:label="G_PA2991">
+      <fbc:geneProduct metaid="G_PA0196" sboTerm="SBO:0000243" fbc:id="G_PA0196" fbc:name="G_PA0196" fbc:label="G_PA0196">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -163959,11 +173602,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2991">
+            <rdf:Description rdf:about="#G_PA0196">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045007"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043667"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164225,7 +173868,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4917" sboTerm="SBO:0000243" fbc:id="G_PA4917" fbc:name="G_PA4917" fbc:label="G_PA4917">
+      <fbc:geneProduct metaid="G_PA4006" sboTerm="SBO:0000243" fbc:id="G_PA4006" fbc:name="G_PA4006" fbc:label="G_PA4006">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164233,18 +173876,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4917">
+            <rdf:Description rdf:about="#G_PA4006">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042501"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4006" sboTerm="SBO:0000243" fbc:id="G_PA4006" fbc:name="G_PA4006" fbc:label="G_PA4006">
+      <fbc:geneProduct metaid="G_PA4917" sboTerm="SBO:0000243" fbc:id="G_PA4917" fbc:name="G_PA4917" fbc:label="G_PA4917">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164252,11 +173895,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4006">
+            <rdf:Description rdf:about="#G_PA4917">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042501"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042501"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896924"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164303,7 +173946,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0355" sboTerm="SBO:0000243" fbc:id="G_PA0355" fbc:name="G_PA0355" fbc:label="G_PA0355">
+      <fbc:geneProduct metaid="G_PA1958" sboTerm="SBO:0000243" fbc:id="G_PA1958" fbc:name="G_PA1958" fbc:label="G_PA1958">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164311,14 +173954,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0355">
+            <rdf:Description rdf:about="#G_PA1958">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002818"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180K2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180K2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH56"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173979"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164346,6 +173987,35 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1202" sboTerm="SBO:0000243" fbc:id="G_PA1202" fbc:name="G_PA1202" fbc:label="G_PA1202">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0355" sboTerm="SBO:0000243" fbc:id="G_PA0355" fbc:name="G_PA0355" fbc:label="G_PA0355">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0355">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180K2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180K2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898238"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3783" sboTerm="SBO:0000243" fbc:id="G_PA3783" fbc:name="G_PA3783" fbc:label="G_PA3783">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164367,13 +174037,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1202" sboTerm="SBO:0000243" fbc:id="G_PA1202" fbc:name="G_PA1202" fbc:label="G_PA1202">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4524" sboTerm="SBO:0000243" fbc:id="G_PA4524" fbc:name="G_PA4524" fbc:label="G_PA4524">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164393,25 +174056,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1783" sboTerm="SBO:0000243" fbc:id="G_PA1783" fbc:name="G_PA1783" fbc:label="G_PA1783">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1783">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042709"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3876" sboTerm="SBO:0000243" fbc:id="G_PA3876" fbc:name="G_PA3876" fbc:label="G_PA3876">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164433,7 +174077,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1173" sboTerm="SBO:0000243" fbc:id="G_PA1173" fbc:name="G_PA1173" fbc:label="G_PA1173">
+      <fbc:geneProduct metaid="G_PA1783" sboTerm="SBO:0000243" fbc:id="G_PA1783" fbc:name="G_PA1783" fbc:label="G_PA1783">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164441,16 +174085,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1173">
+            <rdf:Description rdf:about="#G_PA1783">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946698"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJH9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042709"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164513,7 +174152,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3874" sboTerm="SBO:0000243" fbc:id="G_PA3874" fbc:name="G_PA3874" fbc:label="G_PA3874">
+      <fbc:geneProduct metaid="G_PA1173" sboTerm="SBO:0000243" fbc:id="G_PA1173" fbc:name="G_PA1173" fbc:label="G_PA1173">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164521,24 +174160,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3874">
+            <rdf:Description rdf:about="#G_PA1173">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945780"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10639"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004896"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJH9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175858"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3875" sboTerm="SBO:0000243" fbc:id="G_PA3875" fbc:name="G_PA3875" fbc:label="G_PA3875">
+      <fbc:geneProduct metaid="G_PA3873" sboTerm="SBO:0000243" fbc:id="G_PA3873" fbc:name="G_PA3873" fbc:label="G_PA3873">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164546,17 +174184,42 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3875">
+            <rdf:Description rdf:about="#G_PA3873">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004119"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09152"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945782"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19319"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945999"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10648"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF26"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10645"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3874" sboTerm="SBO:0000243" fbc:id="G_PA3874" fbc:name="G_PA3874" fbc:label="G_PA3874">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA3874">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P11349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10639"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10647"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164588,7 +174251,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3873" sboTerm="SBO:0000243" fbc:id="G_PA3873" fbc:name="G_PA3873" fbc:label="G_PA3873">
+      <fbc:geneProduct metaid="G_PA3875" sboTerm="SBO:0000243" fbc:id="G_PA3875" fbc:name="G_PA3875" fbc:label="G_PA3875">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164596,17 +174259,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3873">
+            <rdf:Description rdf:about="#G_PA3875">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004123"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AF26"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945807"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004892"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945999"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10648"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164640,7 +174303,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2294" sboTerm="SBO:0000243" fbc:id="G_PA2294" fbc:name="G_PA2294" fbc:label="G_PA2294">
+      <fbc:geneProduct metaid="G_PA2295" sboTerm="SBO:0000243" fbc:id="G_PA2295" fbc:name="G_PA2295" fbc:label="G_PA2295">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164648,18 +174311,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2294">
+            <rdf:Description rdf:about="#G_PA2295">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043748"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2328" sboTerm="SBO:0000243" fbc:id="G_PA2328" fbc:name="G_PA2328" fbc:label="G_PA2328">
+      <fbc:geneProduct metaid="G_PA1786" sboTerm="SBO:0000243" fbc:id="G_PA1786" fbc:name="G_PA1786" fbc:label="G_PA1786">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2294" sboTerm="SBO:0000243" fbc:id="G_PA2294" fbc:name="G_PA2294" fbc:label="G_PA2294">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164667,18 +174337,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2328">
+            <rdf:Description rdf:about="#G_PA2294">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046492"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046492"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043749"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2295" sboTerm="SBO:0000243" fbc:id="G_PA2295" fbc:name="G_PA2295" fbc:label="G_PA2295">
+      <fbc:geneProduct metaid="G_PA2327" sboTerm="SBO:0000243" fbc:id="G_PA2327" fbc:name="G_PA2327" fbc:label="G_PA2327">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164686,25 +174356,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2295">
+            <rdf:Description rdf:about="#G_PA2327">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046495"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1786" sboTerm="SBO:0000243" fbc:id="G_PA1786" fbc:name="G_PA1786" fbc:label="G_PA1786">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2296" sboTerm="SBO:0000243" fbc:id="G_PA2296" fbc:name="G_PA2296" fbc:label="G_PA2296">
+      <fbc:geneProduct metaid="G_PA2328" sboTerm="SBO:0000243" fbc:id="G_PA2328" fbc:name="G_PA2328" fbc:label="G_PA2328">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164712,11 +174375,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2296">
+            <rdf:Description rdf:about="#G_PA2328">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046492"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046492"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164749,7 +174412,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2327" sboTerm="SBO:0000243" fbc:id="G_PA2327" fbc:name="G_PA2327" fbc:label="G_PA2327">
+      <fbc:geneProduct metaid="G_PA2296" sboTerm="SBO:0000243" fbc:id="G_PA2296" fbc:name="G_PA2296" fbc:label="G_PA2296">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164757,11 +174420,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2327">
+            <rdf:Description rdf:about="#G_PA2296">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046495"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043747"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164794,6 +174457,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0524" sboTerm="SBO:0000243" fbc:id="G_PA0524" fbc:name="G_PA0524" fbc:label="G_PA0524">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1488" sboTerm="SBO:0000243" fbc:id="G_PA1488" fbc:name="G_PA1488" fbc:label="G_PA1488">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164819,25 +174489,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3625" sboTerm="SBO:0000243" fbc:id="G_PA3625" fbc:name="G_PA3625" fbc:label="G_PA3625">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3625">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044860"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044860"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3886" sboTerm="SBO:0000243" fbc:id="G_PA3886" fbc:name="G_PA3886" fbc:label="G_PA3886">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -164863,7 +174514,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5177" sboTerm="SBO:0000243" fbc:id="G_PA5177" fbc:name="G_PA5177" fbc:label="G_PA5177">
+      <fbc:geneProduct metaid="G_PA3625" sboTerm="SBO:0000243" fbc:id="G_PA3625" fbc:name="G_PA3625" fbc:label="G_PA3625">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164871,20 +174522,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5177">
+            <rdf:Description rdf:about="#G_PA3625">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011092"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P64636"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044860"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4952" sboTerm="SBO:0000243" fbc:id="G_PA4952" fbc:name="G_PA4952" fbc:label="G_PA4952">
+      <fbc:geneProduct metaid="G_PA5177" sboTerm="SBO:0000243" fbc:id="G_PA5177" fbc:name="G_PA5177" fbc:label="G_PA5177">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164892,11 +174541,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4952">
+            <rdf:Description rdf:about="#G_PA5177">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P64636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12928"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -164924,7 +174575,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2071" sboTerm="SBO:0000243" fbc:id="G_PA2071" fbc:name="G_PA2071" fbc:label="G_PA2071">
+      <fbc:geneProduct metaid="G_PA4952" sboTerm="SBO:0000243" fbc:id="G_PA4952" fbc:name="G_PA4952" fbc:label="G_PA4952">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -164932,36 +174583,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2071">
+            <rdf:Description rdf:about="#G_PA4952">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045126"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4566" sboTerm="SBO:0000243" fbc:id="G_PA4566" fbc:name="G_PA4566" fbc:label="G_PA4566">
+      <fbc:geneProduct metaid="G_PA3903" sboTerm="SBO:0000243" fbc:id="G_PA3903" fbc:name="G_PA3903" fbc:label="G_PA3903">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4265" sboTerm="SBO:0000243" fbc:id="G_PA4265" fbc:name="G_PA4265" fbc:label="G_PA4265">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4566">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013661"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25519"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10437"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4943" sboTerm="SBO:0000243" fbc:id="G_PA4943" fbc:name="G_PA4943" fbc:label="G_PA4943">
         <notes>
@@ -164982,13 +174627,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4265" sboTerm="SBO:0000243" fbc:id="G_PA4265" fbc:name="G_PA4265" fbc:label="G_PA4265">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4604" sboTerm="SBO:0000243" fbc:id="G_PA4604" fbc:name="G_PA4604" fbc:label="G_PA4604">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -165029,12 +174667,44 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3903" sboTerm="SBO:0000243" fbc:id="G_PA3903" fbc:name="G_PA3903" fbc:label="G_PA3903">
+      <fbc:geneProduct metaid="G_PA2071" sboTerm="SBO:0000243" fbc:id="G_PA2071" fbc:name="G_PA2071" fbc:label="G_PA2071">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2071">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888240"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4566" sboTerm="SBO:0000243" fbc:id="G_PA4566" fbc:name="G_PA4566" fbc:label="G_PA4566">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4566">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P25519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10437"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5334" sboTerm="SBO:0000243" fbc:id="G_PA5334" fbc:name="G_PA5334" fbc:label="G_PA5334">
         <notes>
@@ -165083,6 +174753,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0387" sboTerm="SBO:0000243" fbc:id="G_PA0387" fbc:name="G_PA0387" fbc:label="G_PA0387">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0387">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042681"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4789" sboTerm="SBO:0000243" fbc:id="G_PA4789" fbc:name="G_PA4789" fbc:label="G_PA4789">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -165181,7 +174870,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1781" sboTerm="SBO:0000243" fbc:id="G_PA1781" fbc:name="G_PA1781" fbc:label="G_PA1781">
+      <fbc:geneProduct metaid="G_PA3530" sboTerm="SBO:0000243" fbc:id="G_PA3530" fbc:name="G_PA3530" fbc:label="G_PA3530">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165189,27 +174878,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1781">
+            <rdf:Description rdf:about="#G_PA3530">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001100"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005117"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006066"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006067"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011255"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012744"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017121"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P42435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFW0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173007"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3530" sboTerm="SBO:0000243" fbc:id="G_PA3530" fbc:name="G_PA3530" fbc:label="G_PA3530">
+      <fbc:geneProduct metaid="G_PA1781" sboTerm="SBO:0000243" fbc:id="G_PA1781" fbc:name="G_PA1781" fbc:label="G_PA1781">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165217,28 +174907,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3530">
+            <rdf:Description rdf:about="#G_PA1781">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886665"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001100"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005117"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006066"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006067"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007419"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011255"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012744"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFW0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173007"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P42435"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1417" sboTerm="SBO:0000243" fbc:id="G_PA1417" fbc:name="G_PA1417" fbc:label="G_PA1417">
+      <fbc:geneProduct metaid="G_PA4977" sboTerm="SBO:0000243" fbc:id="G_PA4977" fbc:name="G_PA4977" fbc:label="G_PA4977">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165246,18 +174935,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1417">
+            <rdf:Description rdf:about="#G_PA4977">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043901"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045575"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4977" sboTerm="SBO:0000243" fbc:id="G_PA4977" fbc:name="G_PA4977" fbc:label="G_PA4977">
+      <fbc:geneProduct metaid="G_PA1417" sboTerm="SBO:0000243" fbc:id="G_PA1417" fbc:name="G_PA1417" fbc:label="G_PA1417">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165265,24 +174953,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4977">
+            <rdf:Description rdf:about="#G_PA1417">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043901"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3415" sboTerm="SBO:0000243" fbc:id="G_PA3415" fbc:name="G_PA3415" fbc:label="G_PA3415">
+      <fbc:geneProduct metaid="G_PA3417" sboTerm="SBO:0000243" fbc:id="G_PA3417" fbc:name="G_PA3417" fbc:label="G_PA3417">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3417" sboTerm="SBO:0000243" fbc:id="G_PA3417" fbc:name="G_PA3417" fbc:label="G_PA3417">
+      <fbc:geneProduct metaid="G_PA3415" sboTerm="SBO:0000243" fbc:id="G_PA3415" fbc:name="G_PA3415" fbc:label="G_PA3415">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165322,7 +175011,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3537" sboTerm="SBO:0000243" fbc:id="G_PA3537" fbc:name="G_PA3537" fbc:label="G_PA3537">
+      <fbc:geneProduct metaid="G_PA5172" sboTerm="SBO:0000243" fbc:id="G_PA5172" fbc:name="G_PA5172" fbc:label="G_PA5172">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165330,18 +175019,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3537">
+            <rdf:Description rdf:about="#G_PA5172">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044931"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5172" sboTerm="SBO:0000243" fbc:id="G_PA5172" fbc:name="G_PA5172" fbc:label="G_PA5172">
+      <fbc:geneProduct metaid="G_PA3537" sboTerm="SBO:0000243" fbc:id="G_PA3537" fbc:name="G_PA3537" fbc:label="G_PA3537">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165349,11 +175038,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5172">
+            <rdf:Description rdf:about="#G_PA3537">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044931"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044722"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165424,7 +175113,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2247" sboTerm="SBO:0000243" fbc:id="G_PA2247" fbc:name="G_PA2247" fbc:label="G_PA2247">
+      <fbc:geneProduct metaid="G_PA2249" sboTerm="SBO:0000243" fbc:id="G_PA2249" fbc:name="G_PA2249" fbc:label="G_PA2249">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165432,11 +175121,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2247">
+            <rdf:Description rdf:about="#G_PA2249">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043796"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165481,7 +175170,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2249" sboTerm="SBO:0000243" fbc:id="G_PA2249" fbc:name="G_PA2249" fbc:label="G_PA2249">
+      <fbc:geneProduct metaid="G_PA2247" sboTerm="SBO:0000243" fbc:id="G_PA2247" fbc:name="G_PA2247" fbc:label="G_PA2247">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165489,11 +175178,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2249">
+            <rdf:Description rdf:about="#G_PA2247">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043796"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041720"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -165937,7 +175626,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3542" sboTerm="SBO:0000243" fbc:id="G_PA3542" fbc:name="G_PA3542" fbc:label="G_PA3542">
+      <fbc:geneProduct metaid="G_PA3543" sboTerm="SBO:0000243" fbc:id="G_PA3543" fbc:name="G_PA3543" fbc:label="G_PA3543">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165945,18 +175634,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3542">
+            <rdf:Description rdf:about="#G_PA3543">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044531"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043198"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3543" sboTerm="SBO:0000243" fbc:id="G_PA3543" fbc:name="G_PA3543" fbc:label="G_PA3543">
+      <fbc:geneProduct metaid="G_PA3542" sboTerm="SBO:0000243" fbc:id="G_PA3542" fbc:name="G_PA3542" fbc:label="G_PA3542">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -165964,11 +175653,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3543">
+            <rdf:Description rdf:about="#G_PA3542">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044531"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166032,6 +175721,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5436" sboTerm="SBO:0000243" fbc:id="G_PA5436" fbc:name="G_PA5436" fbc:label="G_PA5436">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA5436">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042115"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1400" sboTerm="SBO:0000243" fbc:id="G_PA1400" fbc:name="G_PA1400" fbc:label="G_PA1400">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166109,25 +175817,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5436" sboTerm="SBO:0000243" fbc:id="G_PA5436" fbc:name="G_PA5436" fbc:label="G_PA5436">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5436">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042115"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5435" sboTerm="SBO:0000243" fbc:id="G_PA5435" fbc:name="G_PA5435" fbc:label="G_PA5435">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166175,7 +175864,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0153" sboTerm="SBO:0000243" fbc:id="G_PA0153" fbc:name="G_PA0153" fbc:label="G_PA0153">
+      <fbc:geneProduct metaid="G_PA0154" sboTerm="SBO:0000243" fbc:id="G_PA0154" fbc:name="G_PA0154" fbc:label="G_PA0154">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166183,18 +175872,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0153">
+            <rdf:Description rdf:about="#G_PA0154">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041888"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043359"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0154" sboTerm="SBO:0000243" fbc:id="G_PA0154" fbc:name="G_PA0154" fbc:label="G_PA0154">
+      <fbc:geneProduct metaid="G_PA0153" sboTerm="SBO:0000243" fbc:id="G_PA0153" fbc:name="G_PA0153" fbc:label="G_PA0153">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166202,24 +175891,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0154">
+            <rdf:Description rdf:about="#G_PA0153">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043359"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041888"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3947" sboTerm="SBO:0000243" fbc:id="G_PA3947" fbc:name="G_PA3947" fbc:label="G_PA3947">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4969" sboTerm="SBO:0000243" fbc:id="G_PA4969" fbc:name="G_PA4969" fbc:label="G_PA4969">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166241,24 +175923,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4367" sboTerm="SBO:0000243" fbc:id="G_PA4367" fbc:name="G_PA4367" fbc:label="G_PA4367">
+      <fbc:geneProduct metaid="G_PA3947" sboTerm="SBO:0000243" fbc:id="G_PA3947" fbc:name="G_PA3947" fbc:label="G_PA3947">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4367">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0861" sboTerm="SBO:0000243" fbc:id="G_PA0861" fbc:name="G_PA0861" fbc:label="G_PA0861">
         <notes>
@@ -166317,6 +175987,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4367" sboTerm="SBO:0000243" fbc:id="G_PA4367" fbc:name="G_PA4367" fbc:label="G_PA4367">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4367">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044813"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5016" sboTerm="SBO:0000243" fbc:id="G_PA5016" fbc:name="G_PA5016" fbc:label="G_PA5016">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166336,6 +176025,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4829" sboTerm="SBO:0000243" fbc:id="G_PA4829" fbc:name="G_PA4829" fbc:label="G_PA4829">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4829">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042081"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5015" sboTerm="SBO:0000243" fbc:id="G_PA5015" fbc:name="G_PA5015" fbc:label="G_PA5015">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166355,7 +176063,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4829" sboTerm="SBO:0000243" fbc:id="G_PA4829" fbc:name="G_PA4829" fbc:label="G_PA4829">
+      <fbc:geneProduct metaid="G_PA1049" sboTerm="SBO:0000243" fbc:id="G_PA1049" fbc:name="G_PA1049" fbc:label="G_PA1049">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166363,11 +176071,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4829">
+            <rdf:Description rdf:about="#G_PA1049">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045279"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4216" sboTerm="SBO:0000243" fbc:id="G_PA4216" fbc:name="G_PA4216" fbc:label="G_PA4216">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA4216">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/103711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS25308.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166402,26 +176129,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4216" sboTerm="SBO:0000243" fbc:id="G_PA4216" fbc:name="G_PA4216" fbc:label="G_PA4216">
+      <fbc:geneProduct metaid="G_PA2212" sboTerm="SBO:0000243" fbc:id="G_PA2212" fbc:name="G_PA2212" fbc:label="G_PA2212">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4216">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/103711"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS25308.1"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1049" sboTerm="SBO:0000243" fbc:id="G_PA1049" fbc:name="G_PA1049" fbc:label="G_PA1049">
+      <fbc:geneProduct metaid="G_PA0593" sboTerm="SBO:0000243" fbc:id="G_PA0593" fbc:name="G_PA0593" fbc:label="G_PA0593">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166429,11 +176144,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1049">
+            <rdf:Description rdf:about="#G_PA0593">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045279"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044116"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166459,7 +176174,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0593" sboTerm="SBO:0000243" fbc:id="G_PA0593" fbc:name="G_PA0593" fbc:label="G_PA0593">
+      <fbc:geneProduct metaid="G_PA1893" sboTerm="SBO:0000243" fbc:id="G_PA1893" fbc:name="G_PA1893" fbc:label="G_PA1893">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0766" sboTerm="SBO:0000243" fbc:id="G_PA0766" fbc:name="G_PA0766" fbc:label="G_PA0766">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166467,24 +176189,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0593">
+            <rdf:Description rdf:about="#G_PA0766">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044116"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/886924"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2212" sboTerm="SBO:0000243" fbc:id="G_PA2212" fbc:name="G_PA2212" fbc:label="G_PA2212">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA1375" sboTerm="SBO:0000243" fbc:id="G_PA1375" fbc:name="G_PA1375" fbc:label="G_PA1375">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166504,7 +176218,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5322" sboTerm="SBO:0000243" fbc:id="G_PA5322" fbc:name="G_PA5322" fbc:label="G_PA5322">
+      <fbc:geneProduct metaid="G_PA4749" sboTerm="SBO:0000243" fbc:id="G_PA4749" fbc:name="G_PA4749" fbc:label="G_PA4749">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166512,18 +176226,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5322">
+            <rdf:Description rdf:about="#G_PA4749">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042276"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043206"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4749" sboTerm="SBO:0000243" fbc:id="G_PA4749" fbc:name="G_PA4749" fbc:label="G_PA4749">
+      <fbc:geneProduct metaid="G_PA5322" sboTerm="SBO:0000243" fbc:id="G_PA5322" fbc:name="G_PA5322" fbc:label="G_PA5322">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166531,11 +176245,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4749">
+            <rdf:Description rdf:about="#G_PA5322">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043206"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042276"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166580,6 +176294,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4204" sboTerm="SBO:0000243" fbc:id="G_PA4204" fbc:name="G_PA4204" fbc:label="G_PA4204">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3182" sboTerm="SBO:0000243" fbc:id="G_PA3182" fbc:name="G_PA3182" fbc:label="G_PA3182">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -166599,14 +176320,66 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4204" sboTerm="SBO:0000243" fbc:id="G_PA4204" fbc:name="G_PA4204" fbc:label="G_PA4204">
+      <fbc:geneProduct metaid="G_PA2263" sboTerm="SBO:0000243" fbc:id="G_PA2263" fbc:name="G_PA2263" fbc:label="G_PA2263">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2263">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047015"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0608" sboTerm="SBO:0000243" fbc:id="G_PA0608" fbc:name="G_PA0608" fbc:label="G_PA0608">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0608">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044138"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2974" sboTerm="SBO:0000243" fbc:id="G_PA2974" fbc:name="G_PA2974" fbc:label="G_PA2974">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2263" sboTerm="SBO:0000243" fbc:id="G_PA2263" fbc:name="G_PA2263" fbc:label="G_PA2263">
+      <fbc:geneProduct metaid="G_PA0065" sboTerm="SBO:0000243" fbc:id="G_PA0065" fbc:name="G_PA0065" fbc:label="G_PA0065">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0810" sboTerm="SBO:0000243" fbc:id="G_PA0810" fbc:name="G_PA0810" fbc:label="G_PA0810">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3172" sboTerm="SBO:0000243" fbc:id="G_PA3172" fbc:name="G_PA3172" fbc:label="G_PA3172">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166614,11 +176387,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2263">
+            <rdf:Description rdf:about="#G_PA3172">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043363"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166734,7 +176507,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4707" sboTerm="SBO:0000243" fbc:id="G_PA4707" fbc:name="G_PA4707" fbc:label="G_PA4707">
+      <fbc:geneProduct metaid="G_PA4706" sboTerm="SBO:0000243" fbc:id="G_PA4706" fbc:name="G_PA4706" fbc:label="G_PA4706">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166742,18 +176515,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4707">
+            <rdf:Description rdf:about="#G_PA4706">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045897"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042001"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4708" sboTerm="SBO:0000243" fbc:id="G_PA4708" fbc:name="G_PA4708" fbc:label="G_PA4708">
+      <fbc:geneProduct metaid="G_PA4707" sboTerm="SBO:0000243" fbc:id="G_PA4707" fbc:name="G_PA4707" fbc:label="G_PA4707">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166761,18 +176534,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4708">
+            <rdf:Description rdf:about="#G_PA4707">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045844"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045897"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4706" sboTerm="SBO:0000243" fbc:id="G_PA4706" fbc:name="G_PA4706" fbc:label="G_PA4706">
+      <fbc:geneProduct metaid="G_PA4708" sboTerm="SBO:0000243" fbc:id="G_PA4708" fbc:name="G_PA4708" fbc:label="G_PA4708">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166780,18 +176553,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4706">
+            <rdf:Description rdf:about="#G_PA4708">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045844"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1477" sboTerm="SBO:0000243" fbc:id="G_PA1477" fbc:name="G_PA1477" fbc:label="G_PA1477">
+      <fbc:geneProduct metaid="G_PA1479" sboTerm="SBO:0000243" fbc:id="G_PA1479" fbc:name="G_PA1479" fbc:label="G_PA1479">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166799,11 +176572,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1477">
+            <rdf:Description rdf:about="#G_PA1479">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12055"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -166829,7 +176604,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1479" sboTerm="SBO:0000243" fbc:id="G_PA1479" fbc:name="G_PA1479" fbc:label="G_PA1479">
+      <fbc:geneProduct metaid="G_PA1477" sboTerm="SBO:0000243" fbc:id="G_PA1477" fbc:name="G_PA1477" fbc:label="G_PA1477">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -166837,13 +176612,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1479">
+            <rdf:Description rdf:about="#G_PA1477">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007271"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69490"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946697"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044099"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167041,14 +176814,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0688" sboTerm="SBO:0000243" fbc:id="G_PA0688" fbc:name="G_PA0688" fbc:label="G_PA0688">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5369" sboTerm="SBO:0000243" fbc:id="G_PA5369" fbc:name="G_PA5369" fbc:label="G_PA5369">
+      <fbc:geneProduct metaid="G_PA5368" sboTerm="SBO:0000243" fbc:id="G_PA5368" fbc:name="G_PA5368" fbc:label="G_PA5368">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167056,18 +176822,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5369">
+            <rdf:Description rdf:about="#G_PA5368">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042187"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5367" sboTerm="SBO:0000243" fbc:id="G_PA5367" fbc:name="G_PA5367" fbc:label="G_PA5367">
+      <fbc:geneProduct metaid="G_PA0688" sboTerm="SBO:0000243" fbc:id="G_PA0688" fbc:name="G_PA0688" fbc:label="G_PA0688">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5369" sboTerm="SBO:0000243" fbc:id="G_PA5369" fbc:name="G_PA5369" fbc:label="G_PA5369">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167075,18 +176848,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5367">
+            <rdf:Description rdf:about="#G_PA5369">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042187"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5368" sboTerm="SBO:0000243" fbc:id="G_PA5368" fbc:name="G_PA5368" fbc:label="G_PA5368">
+      <fbc:geneProduct metaid="G_PA5367" sboTerm="SBO:0000243" fbc:id="G_PA5367" fbc:name="G_PA5367" fbc:label="G_PA5367">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167094,11 +176867,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5368">
+            <rdf:Description rdf:about="#G_PA5367">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167321,6 +177094,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3455" sboTerm="SBO:0000243" fbc:id="G_PA3455" fbc:name="G_PA3455" fbc:label="G_PA3455">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5242" sboTerm="SBO:0000243" fbc:id="G_PA5242" fbc:name="G_PA5242" fbc:label="G_PA5242">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167340,14 +177120,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3455" sboTerm="SBO:0000243" fbc:id="G_PA3455" fbc:name="G_PA3455" fbc:label="G_PA3455">
+      <fbc:geneProduct metaid="G_PA0550" sboTerm="SBO:0000243" fbc:id="G_PA0550" fbc:name="G_PA0550" fbc:label="G_PA0550">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3713" sboTerm="SBO:0000243" fbc:id="G_PA3713" fbc:name="G_PA3713" fbc:label="G_PA3713">
+      <fbc:geneProduct metaid="G_PA1678" sboTerm="SBO:0000243" fbc:id="G_PA1678" fbc:name="G_PA1678" fbc:label="G_PA1678">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4664" sboTerm="SBO:0000243" fbc:id="G_PA4664" fbc:name="G_PA4664" fbc:label="G_PA4664">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167355,10 +177142,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3713">
+            <rdf:Description rdf:about="#G_PA4664">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/5471292"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900275"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167384,14 +177171,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1678" sboTerm="SBO:0000243" fbc:id="G_PA1678" fbc:name="G_PA1678" fbc:label="G_PA1678">
+      <fbc:geneProduct metaid="G_PA0661" sboTerm="SBO:0000243" fbc:id="G_PA0661" fbc:name="G_PA0661" fbc:label="G_PA0661">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4664" sboTerm="SBO:0000243" fbc:id="G_PA4664" fbc:name="G_PA4664" fbc:label="G_PA4664">
+      <fbc:geneProduct metaid="G_PA3713" sboTerm="SBO:0000243" fbc:id="G_PA3713" fbc:name="G_PA3713" fbc:label="G_PA3713">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167399,23 +177186,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4664">
+            <rdf:Description rdf:about="#G_PA3713">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/5471292"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0661" sboTerm="SBO:0000243" fbc:id="G_PA0661" fbc:name="G_PA0661" fbc:label="G_PA0661">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4855" sboTerm="SBO:0000243" fbc:id="G_PA4855" fbc:name="G_PA4855" fbc:label="G_PA4855">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167530,7 +177310,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0789" sboTerm="SBO:0000243" fbc:id="G_PA0789" fbc:name="G_PA0789" fbc:label="G_PA0789">
+      <fbc:geneProduct metaid="G_PA5097" sboTerm="SBO:0000243" fbc:id="G_PA5097" fbc:name="G_PA5097" fbc:label="G_PA5097">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167538,18 +177318,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0789">
+            <rdf:Description rdf:about="#G_PA5097">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044674"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044217"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5097" sboTerm="SBO:0000243" fbc:id="G_PA5097" fbc:name="G_PA5097" fbc:label="G_PA5097">
+      <fbc:geneProduct metaid="G_PA0789" sboTerm="SBO:0000243" fbc:id="G_PA0789" fbc:name="G_PA0789" fbc:label="G_PA0789">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167557,11 +177337,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5097">
+            <rdf:Description rdf:about="#G_PA0789">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044674"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167643,7 +177423,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1143" sboTerm="SBO:0000243" fbc:id="G_PA1143" fbc:name="G_PA1143" fbc:label="G_PA1143">
+      <fbc:geneProduct metaid="G_PA4960" sboTerm="SBO:0000243" fbc:id="G_PA4960" fbc:name="G_PA4960" fbc:label="G_PA4960">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167651,17 +177431,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1143">
+            <rdf:Description rdf:about="#G_PA4960">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041911"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4960" sboTerm="SBO:0000243" fbc:id="G_PA4960" fbc:name="G_PA4960" fbc:label="G_PA4960">
+      <fbc:geneProduct metaid="G_PA0075" sboTerm="SBO:0000243" fbc:id="G_PA0075" fbc:name="G_PA0075" fbc:label="G_PA0075">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167669,18 +177450,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4960">
+            <rdf:Description rdf:about="#G_PA0075">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041911"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887070"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0075" sboTerm="SBO:0000243" fbc:id="G_PA0075" fbc:name="G_PA0075" fbc:label="G_PA0075">
+      <fbc:geneProduct metaid="G_PA1143" sboTerm="SBO:0000243" fbc:id="G_PA1143" fbc:name="G_PA1143" fbc:label="G_PA1143">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167688,10 +177468,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0075">
+            <rdf:Description rdf:about="#G_PA1143">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887270"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167717,14 +177497,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2043" sboTerm="SBO:0000243" fbc:id="G_PA2043" fbc:name="G_PA2043" fbc:label="G_PA2043">
+      <fbc:geneProduct metaid="G_PA4544" sboTerm="SBO:0000243" fbc:id="G_PA4544" fbc:name="G_PA4544" fbc:label="G_PA4544">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4544" sboTerm="SBO:0000243" fbc:id="G_PA4544" fbc:name="G_PA4544" fbc:label="G_PA4544">
+      <fbc:geneProduct metaid="G_PA2043" sboTerm="SBO:0000243" fbc:id="G_PA2043" fbc:name="G_PA2043" fbc:label="G_PA2043">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167771,25 +177551,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3254" sboTerm="SBO:0000243" fbc:id="G_PA3254" fbc:name="G_PA3254" fbc:label="G_PA3254">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3254">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0206" sboTerm="SBO:0000243" fbc:id="G_PA0206" fbc:name="G_PA0206" fbc:label="G_PA0206">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167797,25 +177558,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0205" sboTerm="SBO:0000243" fbc:id="G_PA0205" fbc:name="G_PA0205" fbc:label="G_PA0205">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0205">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898101"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0603" sboTerm="SBO:0000243" fbc:id="G_PA0603" fbc:name="G_PA0603" fbc:label="G_PA0603">
+      <fbc:geneProduct metaid="G_PA0302" sboTerm="SBO:0000243" fbc:id="G_PA0302" fbc:name="G_PA0302" fbc:label="G_PA0302">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167823,11 +177566,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0603">
+            <rdf:Description rdf:about="#G_PA0302">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042548"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -167864,32 +177607,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0324" sboTerm="SBO:0000243" fbc:id="G_PA0324" fbc:name="G_PA0324" fbc:label="G_PA0324">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0302" sboTerm="SBO:0000243" fbc:id="G_PA0302" fbc:name="G_PA0302" fbc:label="G_PA0302">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0302">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042548"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042548"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3607" sboTerm="SBO:0000243" fbc:id="G_PA3607" fbc:name="G_PA3607" fbc:label="G_PA3607">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -167925,7 +177642,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3610" sboTerm="SBO:0000243" fbc:id="G_PA3610" fbc:name="G_PA3610" fbc:label="G_PA3610">
+      <fbc:geneProduct metaid="G_PA0203" sboTerm="SBO:0000243" fbc:id="G_PA0203" fbc:name="G_PA0203" fbc:label="G_PA0203">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167933,17 +177650,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3610">
+            <rdf:Description rdf:about="#G_PA0203">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AM5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AM5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10752"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0203" sboTerm="SBO:0000243" fbc:id="G_PA0203" fbc:name="G_PA0203" fbc:label="G_PA0203">
+      <fbc:geneProduct metaid="G_PA3254" sboTerm="SBO:0000243" fbc:id="G_PA3254" fbc:name="G_PA3254" fbc:label="G_PA3254">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167951,23 +177674,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0203">
+            <rdf:Description rdf:about="#G_PA3254">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001188"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18AM5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18AM5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003789"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945682"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043456"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0604" sboTerm="SBO:0000243" fbc:id="G_PA0604" fbc:name="G_PA0604" fbc:label="G_PA0604">
+      <fbc:geneProduct metaid="G_PA0205" sboTerm="SBO:0000243" fbc:id="G_PA0205" fbc:name="G_PA0205" fbc:label="G_PA0205">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167975,18 +177693,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0604">
+            <rdf:Description rdf:about="#G_PA0205">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044134"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898101"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0304" sboTerm="SBO:0000243" fbc:id="G_PA0304" fbc:name="G_PA0304" fbc:label="G_PA0304">
+      <fbc:geneProduct metaid="G_PA0324" sboTerm="SBO:0000243" fbc:id="G_PA0324" fbc:name="G_PA0324" fbc:label="G_PA0324">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0603" sboTerm="SBO:0000243" fbc:id="G_PA0603" fbc:name="G_PA0603" fbc:label="G_PA0603">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -167994,18 +177718,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0304">
+            <rdf:Description rdf:about="#G_PA0603">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042526"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044131"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0204" sboTerm="SBO:0000243" fbc:id="G_PA0204" fbc:name="G_PA0204" fbc:label="G_PA0204">
+      <fbc:geneProduct metaid="G_PA3610" sboTerm="SBO:0000243" fbc:id="G_PA3610" fbc:name="G_PA3610" fbc:label="G_PA3610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168013,23 +177737,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0204">
+            <rdf:Description rdf:about="#G_PA3610">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFL1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11632"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHG8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898103"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0301" sboTerm="SBO:0000243" fbc:id="G_PA0301" fbc:name="G_PA0301" fbc:label="G_PA0301">
+      <fbc:geneProduct metaid="G_PA0303" sboTerm="SBO:0000243" fbc:id="G_PA0303" fbc:name="G_PA0303" fbc:label="G_PA0303">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168037,20 +177755,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0301">
+            <rdf:Description rdf:about="#G_PA0303">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042551"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0605" sboTerm="SBO:0000243" fbc:id="G_PA0605" fbc:name="G_PA0605" fbc:label="G_PA0605">
+      <fbc:geneProduct metaid="G_PA0604" sboTerm="SBO:0000243" fbc:id="G_PA0604" fbc:name="G_PA0604" fbc:label="G_PA0604">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168058,18 +177774,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0605">
+            <rdf:Description rdf:about="#G_PA0604">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044134"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0300" sboTerm="SBO:0000243" fbc:id="G_PA0300" fbc:name="G_PA0300" fbc:label="G_PA0300">
+      <fbc:geneProduct metaid="G_PA0301" sboTerm="SBO:0000243" fbc:id="G_PA0301" fbc:name="G_PA0301" fbc:label="G_PA0301">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168077,18 +177793,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0300">
+            <rdf:Description rdf:about="#G_PA0301">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042495"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0606" sboTerm="SBO:0000243" fbc:id="G_PA0606" fbc:name="G_PA0606" fbc:label="G_PA0606">
+      <fbc:geneProduct metaid="G_PA3608" sboTerm="SBO:0000243" fbc:id="G_PA3608" fbc:name="G_PA3608" fbc:label="G_PA3608">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168096,11 +177814,32 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0606">
+            <rdf:Description rdf:about="#G_PA3608">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044136"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945475"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11631"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0300" sboTerm="SBO:0000243" fbc:id="G_PA0300" fbc:name="G_PA0300" fbc:label="G_PA0300">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0300">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042495"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042495"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168134,7 +177873,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0303" sboTerm="SBO:0000243" fbc:id="G_PA0303" fbc:name="G_PA0303" fbc:label="G_PA0303">
+      <fbc:geneProduct metaid="G_PA0606" sboTerm="SBO:0000243" fbc:id="G_PA0606" fbc:name="G_PA0606" fbc:label="G_PA0606">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168142,11 +177881,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0303">
+            <rdf:Description rdf:about="#G_PA0606">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044136"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168172,6 +177911,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA0325" sboTerm="SBO:0000243" fbc:id="G_PA0325" fbc:name="G_PA0325" fbc:label="G_PA0325">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA0325">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945692"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHG7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174175"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3609" sboTerm="SBO:0000243" fbc:id="G_PA3609" fbc:name="G_PA3609" fbc:label="G_PA3609">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -168193,7 +177957,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3608" sboTerm="SBO:0000243" fbc:id="G_PA3608" fbc:name="G_PA3608" fbc:label="G_PA3608">
+      <fbc:geneProduct metaid="G_PA0605" sboTerm="SBO:0000243" fbc:id="G_PA0605" fbc:name="G_PA0605" fbc:label="G_PA0605">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168201,20 +177965,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3608">
+            <rdf:Description rdf:about="#G_PA0605">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945475"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11631"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044135"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0325" sboTerm="SBO:0000243" fbc:id="G_PA0325" fbc:name="G_PA0325" fbc:label="G_PA0325">
+      <fbc:geneProduct metaid="G_PA0304" sboTerm="SBO:0000243" fbc:id="G_PA0304" fbc:name="G_PA0304" fbc:label="G_PA0304">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168222,24 +177984,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0325">
+            <rdf:Description rdf:about="#G_PA0304">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFK4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000834"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHG7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042526"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0322" sboTerm="SBO:0000243" fbc:id="G_PA0322" fbc:name="G_PA0322" fbc:label="G_PA0322">
+      <fbc:geneProduct metaid="G_PA0204" sboTerm="SBO:0000243" fbc:id="G_PA0204" fbc:name="G_PA0204" fbc:label="G_PA0204">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168247,11 +178003,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0322">
+            <rdf:Description rdf:about="#G_PA0204">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045973"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFL1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11632"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHG8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174176"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168298,7 +178059,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3597" sboTerm="SBO:0000243" fbc:id="G_PA3597" fbc:name="G_PA3597" fbc:label="G_PA3597">
+      <fbc:geneProduct metaid="G_PA0322" sboTerm="SBO:0000243" fbc:id="G_PA0322" fbc:name="G_PA0322" fbc:label="G_PA0322">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168306,25 +178067,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3597">
+            <rdf:Description rdf:about="#G_PA0322">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042666"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045973"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0312" sboTerm="SBO:0000243" fbc:id="G_PA0312" fbc:name="G_PA0312" fbc:label="G_PA0312">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5516" sboTerm="SBO:0000243" fbc:id="G_PA5516" fbc:name="G_PA5516" fbc:label="G_PA5516">
+      <fbc:geneProduct metaid="G_PA3597" sboTerm="SBO:0000243" fbc:id="G_PA3597" fbc:name="G_PA3597" fbc:label="G_PA3597">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168332,18 +178086,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5516">
+            <rdf:Description rdf:about="#G_PA3597">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042666"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2391" sboTerm="SBO:0000243" fbc:id="G_PA2391" fbc:name="G_PA2391" fbc:label="G_PA2391">
+      <fbc:geneProduct metaid="G_PA0312" sboTerm="SBO:0000243" fbc:id="G_PA0312" fbc:name="G_PA0312" fbc:label="G_PA0312">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA5516" sboTerm="SBO:0000243" fbc:id="G_PA5516" fbc:name="G_PA5516" fbc:label="G_PA5516">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168351,11 +178112,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2391">
+            <rdf:Description rdf:about="#G_PA5516">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045923"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042125"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168400,7 +178161,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2392" sboTerm="SBO:0000243" fbc:id="G_PA2392" fbc:name="G_PA2392" fbc:label="G_PA2392">
+      <fbc:geneProduct metaid="G_PA2391" sboTerm="SBO:0000243" fbc:id="G_PA2391" fbc:name="G_PA2391" fbc:label="G_PA2391">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168408,18 +178169,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2392">
+            <rdf:Description rdf:about="#G_PA2391">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042521"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045923"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2394" sboTerm="SBO:0000243" fbc:id="G_PA2394" fbc:name="G_PA2394" fbc:label="G_PA2394">
+      <fbc:geneProduct metaid="G_PA2395" sboTerm="SBO:0000243" fbc:id="G_PA2395" fbc:name="G_PA2395" fbc:label="G_PA2395">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168427,18 +178188,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2394">
+            <rdf:Description rdf:about="#G_PA2395">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042529"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2395" sboTerm="SBO:0000243" fbc:id="G_PA2395" fbc:name="G_PA2395" fbc:label="G_PA2395">
+      <fbc:geneProduct metaid="G_PA2392" sboTerm="SBO:0000243" fbc:id="G_PA2392" fbc:name="G_PA2392" fbc:label="G_PA2392">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168446,11 +178207,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2395">
+            <rdf:Description rdf:about="#G_PA2392">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042529"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042529"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042521"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2394" sboTerm="SBO:0000243" fbc:id="G_PA2394" fbc:name="G_PA2394" fbc:label="G_PA2394">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA2394">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042524"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168613,6 +178393,32 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1948" sboTerm="SBO:0000243" fbc:id="G_PA1948" fbc:name="G_PA1948" fbc:label="G_PA1948">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1948">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045625"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1949" sboTerm="SBO:0000243" fbc:id="G_PA1949" fbc:name="G_PA1949" fbc:label="G_PA1949">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0136" sboTerm="SBO:0000243" fbc:id="G_PA0136" fbc:name="G_PA0136" fbc:label="G_PA0136">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -168678,14 +178484,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1949" sboTerm="SBO:0000243" fbc:id="G_PA1949" fbc:name="G_PA1949" fbc:label="G_PA1949">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1948" sboTerm="SBO:0000243" fbc:id="G_PA1948" fbc:name="G_PA1948" fbc:label="G_PA1948">
+      <fbc:geneProduct metaid="G_PA1156" sboTerm="SBO:0000243" fbc:id="G_PA1156" fbc:name="G_PA1156" fbc:label="G_PA1156">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168693,11 +178492,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1948">
+            <rdf:Description rdf:about="#G_PA1156">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045625"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045795"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168723,7 +178522,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1156" sboTerm="SBO:0000243" fbc:id="G_PA1156" fbc:name="G_PA1156" fbc:label="G_PA1156">
+      <fbc:geneProduct metaid="G_PA5497" sboTerm="SBO:0000243" fbc:id="G_PA5497" fbc:name="G_PA5497" fbc:label="G_PA5497">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168731,18 +178530,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1156">
+            <rdf:Description rdf:about="#G_PA5497">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045795"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045795"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BC3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BC3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887666"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5497" sboTerm="SBO:0000243" fbc:id="G_PA5497" fbc:name="G_PA5497" fbc:label="G_PA5497">
+      <fbc:geneProduct metaid="G_PA1920" sboTerm="SBO:0000243" fbc:id="G_PA1920" fbc:name="G_PA1920" fbc:label="G_PA1920">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2726" sboTerm="SBO:0000243" fbc:id="G_PA2726" fbc:name="G_PA2726" fbc:label="G_PA2726">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168750,15 +178560,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5497">
+            <rdf:Description rdf:about="#G_PA2726">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000788"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005144"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18BC3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18BC3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001989"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKG2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176272"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -168840,35 +178648,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1922" sboTerm="SBO:0000243" fbc:id="G_PA1922" fbc:name="G_PA1922" fbc:label="G_PA1922">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1922">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17315"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10155"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0931" sboTerm="SBO:0000243" fbc:id="G_PA0931" fbc:name="G_PA0931" fbc:label="G_PA0931">
+      <fbc:geneProduct metaid="G_PA2689" sboTerm="SBO:0000243" fbc:id="G_PA2689" fbc:name="G_PA2689" fbc:label="G_PA2689">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2689" sboTerm="SBO:0000243" fbc:id="G_PA2689" fbc:name="G_PA2689" fbc:label="G_PA2689">
+      <fbc:geneProduct metaid="G_PA2587" sboTerm="SBO:0000243" fbc:id="G_PA2587" fbc:name="G_PA2587" fbc:label="G_PA2587">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168894,7 +178681,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5417" sboTerm="SBO:0000243" fbc:id="G_PA5417" fbc:name="G_PA5417" fbc:label="G_PA5417">
+      <fbc:geneProduct metaid="G_PA5418" sboTerm="SBO:0000243" fbc:id="G_PA5418" fbc:name="G_PA5418" fbc:label="G_PA5418">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168902,18 +178689,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5417">
+            <rdf:Description rdf:about="#G_PA5418">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044023"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5416" sboTerm="SBO:0000243" fbc:id="G_PA5416" fbc:name="G_PA5416" fbc:label="G_PA5416">
+      <fbc:geneProduct metaid="G_PA5417" sboTerm="SBO:0000243" fbc:id="G_PA5417" fbc:name="G_PA5417" fbc:label="G_PA5417">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168921,18 +178708,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5416">
+            <rdf:Description rdf:about="#G_PA5417">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044022"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5418" sboTerm="SBO:0000243" fbc:id="G_PA5418" fbc:name="G_PA5418" fbc:label="G_PA5418">
+      <fbc:geneProduct metaid="G_PA5416" sboTerm="SBO:0000243" fbc:id="G_PA5416" fbc:name="G_PA5416" fbc:label="G_PA5416">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -168940,11 +178727,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5418">
+            <rdf:Description rdf:about="#G_PA5416">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044020"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169010,7 +178797,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0851" sboTerm="SBO:0000243" fbc:id="G_PA0851" fbc:name="G_PA0851" fbc:label="G_PA0851">
+      <fbc:geneProduct metaid="G_PA2683" sboTerm="SBO:0000243" fbc:id="G_PA2683" fbc:name="G_PA2683" fbc:label="G_PA2683">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169018,21 +178805,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0851">
+            <rdf:Description rdf:about="#G_PA2683">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897314"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010249"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGF6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/853662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000001701"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2683" sboTerm="SBO:0000243" fbc:id="G_PA2683" fbc:name="G_PA2683" fbc:label="G_PA2683">
+      <fbc:geneProduct metaid="G_PA2443" sboTerm="SBO:0000243" fbc:id="G_PA2443" fbc:name="G_PA2443" fbc:label="G_PA2443">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169040,18 +178824,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2683">
+            <rdf:Description rdf:about="#G_PA2443">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/853662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000001701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044912"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2443" sboTerm="SBO:0000243" fbc:id="G_PA2443" fbc:name="G_PA2443" fbc:label="G_PA2443">
+      <fbc:geneProduct metaid="G_PA5379" sboTerm="SBO:0000243" fbc:id="G_PA5379" fbc:name="G_PA5379" fbc:label="G_PA5379">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169059,18 +178843,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2443">
+            <rdf:Description rdf:about="#G_PA5379">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046791"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5379" sboTerm="SBO:0000243" fbc:id="G_PA5379" fbc:name="G_PA5379" fbc:label="G_PA5379">
+      <fbc:geneProduct metaid="G_PA0851" sboTerm="SBO:0000243" fbc:id="G_PA0851" fbc:name="G_PA0851" fbc:label="G_PA0851">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169078,13 +178864,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5379">
+            <rdf:Description rdf:about="#G_PA0851">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046791"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/897314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGF6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10990"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169358,7 +179145,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1540" sboTerm="SBO:0000243" fbc:id="G_PA1540" fbc:name="G_PA1540" fbc:label="G_PA1540">
+      <fbc:geneProduct metaid="G_PA1541" sboTerm="SBO:0000243" fbc:id="G_PA1541" fbc:name="G_PA1541" fbc:label="G_PA1541">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169366,20 +179153,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1540">
+            <rdf:Description rdf:about="#G_PA1541">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005343"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947333"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946139"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13927"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1541" sboTerm="SBO:0000243" fbc:id="G_PA1541" fbc:name="G_PA1541" fbc:label="G_PA1541">
+      <fbc:geneProduct metaid="G_PA1540" sboTerm="SBO:0000243" fbc:id="G_PA1540" fbc:name="G_PA1540" fbc:label="G_PA1540">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169387,13 +179174,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1541">
+            <rdf:Description rdf:about="#G_PA1540">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69212"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946139"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13926"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169424,7 +179211,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4468" sboTerm="SBO:0000243" fbc:id="G_PA4468" fbc:name="G_PA4468" fbc:label="G_PA4468">
+      <fbc:geneProduct metaid="G_PA4366" sboTerm="SBO:0000243" fbc:id="G_PA4366" fbc:name="G_PA4366" fbc:label="G_PA4366">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169432,18 +179219,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4468">
+            <rdf:Description rdf:about="#G_PA4366">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044859"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044816"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4366" sboTerm="SBO:0000243" fbc:id="G_PA4366" fbc:name="G_PA4366" fbc:label="G_PA4366">
+      <fbc:geneProduct metaid="G_PA4468" sboTerm="SBO:0000243" fbc:id="G_PA4468" fbc:name="G_PA4468" fbc:label="G_PA4468">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169451,18 +179238,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4366">
+            <rdf:Description rdf:about="#G_PA4468">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044816"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044859"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2953" sboTerm="SBO:0000243" fbc:id="G_PA2953" fbc:name="G_PA2953" fbc:label="G_PA2953">
+      <fbc:geneProduct metaid="G_PA2701" sboTerm="SBO:0000243" fbc:id="G_PA2701" fbc:name="G_PA2701" fbc:label="G_PA2701">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2951" sboTerm="SBO:0000243" fbc:id="G_PA2951" fbc:name="G_PA2951" fbc:label="G_PA2951">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169470,18 +179264,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2953">
+            <rdf:Description rdf:about="#G_PA2951">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042459"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2952" sboTerm="SBO:0000243" fbc:id="G_PA2952" fbc:name="G_PA2952" fbc:label="G_PA2952">
+      <fbc:geneProduct metaid="G_PA2953" sboTerm="SBO:0000243" fbc:id="G_PA2953" fbc:name="G_PA2953" fbc:label="G_PA2953">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169489,18 +179283,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2952">
+            <rdf:Description rdf:about="#G_PA2953">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042462"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2951" sboTerm="SBO:0000243" fbc:id="G_PA2951" fbc:name="G_PA2951" fbc:label="G_PA2951">
+      <fbc:geneProduct metaid="G_PA2952" sboTerm="SBO:0000243" fbc:id="G_PA2952" fbc:name="G_PA2952" fbc:label="G_PA2952">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169508,18 +179302,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2951">
+            <rdf:Description rdf:about="#G_PA2952">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042459"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1581" sboTerm="SBO:0000243" fbc:id="G_PA1581" fbc:name="G_PA1581" fbc:label="G_PA1581">
+      <fbc:geneProduct metaid="G_PA1582" sboTerm="SBO:0000243" fbc:id="G_PA1582" fbc:name="G_PA1582" fbc:label="G_PA1582">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169527,11 +179321,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1581">
+            <rdf:Description rdf:about="#G_PA1582">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042426"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042613"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169557,7 +179351,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1582" sboTerm="SBO:0000243" fbc:id="G_PA1582" fbc:name="G_PA1582" fbc:label="G_PA1582">
+      <fbc:geneProduct metaid="G_PA1581" sboTerm="SBO:0000243" fbc:id="G_PA1581" fbc:name="G_PA1581" fbc:label="G_PA1581">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169565,11 +179359,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1582">
+            <rdf:Description rdf:about="#G_PA1581">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042613"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042426"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169633,7 +179427,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1838" sboTerm="SBO:0000243" fbc:id="G_PA1838" fbc:name="G_PA1838" fbc:label="G_PA1838">
+      <fbc:geneProduct metaid="G_PA4513" sboTerm="SBO:0000243" fbc:id="G_PA4513" fbc:name="G_PA4513" fbc:label="G_PA4513">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169641,18 +179435,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1838">
+            <rdf:Description rdf:about="#G_PA4513">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045402"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044731"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4513" sboTerm="SBO:0000243" fbc:id="G_PA4513" fbc:name="G_PA4513" fbc:label="G_PA4513">
+      <fbc:geneProduct metaid="G_PA1838" sboTerm="SBO:0000243" fbc:id="G_PA1838" fbc:name="G_PA1838" fbc:label="G_PA1838">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169660,11 +179454,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4513">
+            <rdf:Description rdf:about="#G_PA1838">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044731"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045402"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169716,7 +179510,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0193" sboTerm="SBO:0000243" fbc:id="G_PA0193" fbc:name="G_PA0193" fbc:label="G_PA0193">
+      <fbc:geneProduct metaid="G_PA3935" sboTerm="SBO:0000243" fbc:id="G_PA3935" fbc:name="G_PA3935" fbc:label="G_PA3935">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169724,23 +179518,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0193">
+            <rdf:Description rdf:about="#G_PA3935">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37610"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945021"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12423"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003819"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WKB9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043779"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043779"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3935" sboTerm="SBO:0000243" fbc:id="G_PA3935" fbc:name="G_PA3935" fbc:label="G_PA3935">
+      <fbc:geneProduct metaid="G_PA0193" sboTerm="SBO:0000243" fbc:id="G_PA0193" fbc:name="G_PA0193" fbc:label="G_PA0193">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169748,24 +179537,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3935">
+            <rdf:Description rdf:about="#G_PA0193">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043779"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043779"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WKB9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173030"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0185" sboTerm="SBO:0000243" fbc:id="G_PA0185" fbc:name="G_PA0185" fbc:label="G_PA0185">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA2595" sboTerm="SBO:0000243" fbc:id="G_PA2595" fbc:name="G_PA2595" fbc:label="G_PA2595">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169773,24 +179560,12 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0387" sboTerm="SBO:0000243" fbc:id="G_PA0387" fbc:name="G_PA0387" fbc:label="G_PA0387">
+      <fbc:geneProduct metaid="G_PA0185" sboTerm="SBO:0000243" fbc:id="G_PA0185" fbc:name="G_PA0185" fbc:label="G_PA0185">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0387">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042681"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042681"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3666" sboTerm="SBO:0000243" fbc:id="G_PA3666" fbc:name="G_PA3666" fbc:label="G_PA3666">
         <notes>
@@ -169837,27 +179612,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3252" sboTerm="SBO:0000243" fbc:id="G_PA3252" fbc:name="G_PA3252" fbc:label="G_PA3252">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3252">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJE3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173367"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA5413" sboTerm="SBO:0000243" fbc:id="G_PA5413" fbc:name="G_PA5413" fbc:label="G_PA5413">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -169922,7 +179676,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2710" sboTerm="SBO:0000243" fbc:id="G_PA2710" fbc:name="G_PA2710" fbc:label="G_PA2710">
+      <fbc:geneProduct metaid="G_PA2929" sboTerm="SBO:0000243" fbc:id="G_PA2929" fbc:name="G_PA2929" fbc:label="G_PA2929">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169930,20 +179684,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2710">
+            <rdf:Description rdf:about="#G_PA2929">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001123"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004778"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKX8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG38"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11468"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2929" sboTerm="SBO:0000243" fbc:id="G_PA2929" fbc:name="G_PA2929" fbc:label="G_PA2929">
+      <fbc:geneProduct metaid="G_PA2710" sboTerm="SBO:0000243" fbc:id="G_PA2710" fbc:name="G_PA2710" fbc:label="G_PA2710">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169951,13 +179705,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2929">
+            <rdf:Description rdf:about="#G_PA2710">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG38"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948317"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKX8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176667"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -169983,7 +179737,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0381" sboTerm="SBO:0000243" fbc:id="G_PA0381" fbc:name="G_PA0381" fbc:label="G_PA0381">
+      <fbc:geneProduct metaid="G_PA2062" sboTerm="SBO:0000243" fbc:id="G_PA2062" fbc:name="G_PA2062" fbc:label="G_PA2062">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -169991,18 +179745,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0381">
+            <rdf:Description rdf:about="#G_PA2062">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042149"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045604"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2062" sboTerm="SBO:0000243" fbc:id="G_PA2062" fbc:name="G_PA2062" fbc:label="G_PA2062">
+      <fbc:geneProduct metaid="G_PA1164" sboTerm="SBO:0000243" fbc:id="G_PA1164" fbc:name="G_PA1164" fbc:label="G_PA1164">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170010,18 +179764,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2062">
+            <rdf:Description rdf:about="#G_PA1164">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045604"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P12282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10154"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11587"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5118" sboTerm="SBO:0000243" fbc:id="G_PA5118" fbc:name="G_PA5118" fbc:label="G_PA5118">
+      <fbc:geneProduct metaid="G_PA0380" sboTerm="SBO:0000243" fbc:id="G_PA0380" fbc:name="G_PA0380" fbc:label="G_PA0380">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170029,18 +179789,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5118">
+            <rdf:Description rdf:about="#G_PA0380">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041702"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042679"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042679"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0380" sboTerm="SBO:0000243" fbc:id="G_PA0380" fbc:name="G_PA0380" fbc:label="G_PA0380">
+      <fbc:geneProduct metaid="G_PA0381" sboTerm="SBO:0000243" fbc:id="G_PA0381" fbc:name="G_PA0381" fbc:label="G_PA0381">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170048,18 +179808,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0380">
+            <rdf:Description rdf:about="#G_PA0381">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042679"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042679"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042149"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3814" sboTerm="SBO:0000243" fbc:id="G_PA3814" fbc:name="G_PA3814" fbc:label="G_PA3814">
+      <fbc:geneProduct metaid="G_PA5118" sboTerm="SBO:0000243" fbc:id="G_PA5118" fbc:name="G_PA5118" fbc:label="G_PA5118">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170067,18 +179827,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3814">
+            <rdf:Description rdf:about="#G_PA5118">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041702"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1164" sboTerm="SBO:0000243" fbc:id="G_PA1164" fbc:name="G_PA1164" fbc:label="G_PA1164">
+      <fbc:geneProduct metaid="G_PA3814" sboTerm="SBO:0000243" fbc:id="G_PA3814" fbc:name="G_PA3814" fbc:label="G_PA3814">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170086,17 +179846,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1164">
+            <rdf:Description rdf:about="#G_PA3814">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002820"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P12282"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10154"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30138"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948500"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170190,7 +179944,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4356" sboTerm="SBO:0000243" fbc:id="G_PA4356" fbc:name="G_PA4356" fbc:label="G_PA4356">
+      <fbc:geneProduct metaid="G_PA3723" sboTerm="SBO:0000243" fbc:id="G_PA3723" fbc:name="G_PA3723" fbc:label="G_PA3723">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170198,11 +179952,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4356">
+            <rdf:Description rdf:about="#G_PA3723">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044822"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045742"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170228,7 +179982,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3723" sboTerm="SBO:0000243" fbc:id="G_PA3723" fbc:name="G_PA3723" fbc:label="G_PA3723">
+      <fbc:geneProduct metaid="G_PA4356" sboTerm="SBO:0000243" fbc:id="G_PA4356" fbc:name="G_PA4356" fbc:label="G_PA4356">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170236,11 +179990,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3723">
+            <rdf:Description rdf:about="#G_PA4356">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045742"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044822"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170354,7 +180108,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0035" sboTerm="SBO:0000243" fbc:id="G_PA0035" fbc:name="G_PA0035" fbc:label="G_PA0035">
+      <fbc:geneProduct metaid="G_PA0036" sboTerm="SBO:0000243" fbc:id="G_PA0036" fbc:name="G_PA0036" fbc:label="G_PA0036">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170362,18 +180116,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0035">
+            <rdf:Description rdf:about="#G_PA0036">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043564"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0036" sboTerm="SBO:0000243" fbc:id="G_PA0036" fbc:name="G_PA0036" fbc:label="G_PA0036">
+      <fbc:geneProduct metaid="G_PA0035" sboTerm="SBO:0000243" fbc:id="G_PA0035" fbc:name="G_PA0035" fbc:label="G_PA0035">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170381,11 +180135,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0036">
+            <rdf:Description rdf:about="#G_PA0035">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043564"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043563"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170522,6 +180276,48 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA1384" sboTerm="SBO:0000243" fbc:id="G_PA1384" fbc:name="G_PA1384" fbc:label="G_PA1384">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_PA1384">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/606953"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS242.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100759306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100759306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183E8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183E8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/74246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS18796.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025308"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P55180"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4450" sboTerm="SBO:0000243" fbc:id="G_PA4450" fbc:name="G_PA4450" fbc:label="G_PA4450">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -170579,7 +180375,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4020" sboTerm="SBO:0000243" fbc:id="G_PA4020" fbc:name="G_PA4020" fbc:label="G_PA4020">
+      <fbc:geneProduct metaid="G_PA4411" sboTerm="SBO:0000243" fbc:id="G_PA4411" fbc:name="G_PA4411" fbc:label="G_PA4411">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170587,18 +180383,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4020">
+            <rdf:Description rdf:about="#G_PA4411">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4411" sboTerm="SBO:0000243" fbc:id="G_PA4411" fbc:name="G_PA4411" fbc:label="G_PA4411">
+      <fbc:geneProduct metaid="G_PA4020" sboTerm="SBO:0000243" fbc:id="G_PA4020" fbc:name="G_PA4020" fbc:label="G_PA4020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170606,11 +180402,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4411">
+            <rdf:Description rdf:about="#G_PA4020">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170655,48 +180451,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1384" sboTerm="SBO:0000243" fbc:id="G_PA1384" fbc:name="G_PA1384" fbc:label="G_PA1384">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1384">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/606953"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2582"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS242.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100759306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100759306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001509"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025308"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183E8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183E8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002575"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945354"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/74246"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS18796.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001509"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR025308"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11837"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P55180"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3146" sboTerm="SBO:0000243" fbc:id="G_PA3146" fbc:name="G_PA3146" fbc:label="G_PA3146">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -170868,7 +180622,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4646" sboTerm="SBO:0000243" fbc:id="G_PA4646" fbc:name="G_PA4646" fbc:label="G_PA4646">
+      <fbc:geneProduct metaid="G_PA0403" sboTerm="SBO:0000243" fbc:id="G_PA0403" fbc:name="G_PA0403" fbc:label="G_PA0403">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170876,18 +180630,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4646">
+            <rdf:Description rdf:about="#G_PA0403">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044582"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042230"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0403" sboTerm="SBO:0000243" fbc:id="G_PA0403" fbc:name="G_PA0403" fbc:label="G_PA0403">
+      <fbc:geneProduct metaid="G_PA4646" sboTerm="SBO:0000243" fbc:id="G_PA4646" fbc:name="G_PA4646" fbc:label="G_PA4646">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170895,18 +180649,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0403">
+            <rdf:Description rdf:about="#G_PA4646">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042230"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044582"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044582"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA0352" sboTerm="SBO:0000243" fbc:id="G_PA0352" fbc:name="G_PA0352" fbc:label="G_PA0352">
+      <fbc:geneProduct metaid="G_PA2938" sboTerm="SBO:0000243" fbc:id="G_PA2938" fbc:name="G_PA2938" fbc:label="G_PA2938">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170914,11 +180668,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA0352">
+            <rdf:Description rdf:about="#G_PA2938">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042015"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170944,7 +180698,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2938" sboTerm="SBO:0000243" fbc:id="G_PA2938" fbc:name="G_PA2938" fbc:label="G_PA2938">
+      <fbc:geneProduct metaid="G_PA0352" sboTerm="SBO:0000243" fbc:id="G_PA0352" fbc:name="G_PA0352" fbc:label="G_PA0352">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -170952,11 +180706,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA2938">
+            <rdf:Description rdf:about="#G_PA0352">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046571"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -170982,26 +180736,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4867" sboTerm="SBO:0000243" fbc:id="G_PA4867" fbc:name="G_PA4867" fbc:label="G_PA4867">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4867">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042747"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4891" sboTerm="SBO:0000243" fbc:id="G_PA4891" fbc:name="G_PA4891" fbc:label="G_PA4891">
+      <fbc:geneProduct metaid="G_PA4893" sboTerm="SBO:0000243" fbc:id="G_PA4893" fbc:name="G_PA4893" fbc:label="G_PA4893">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171009,11 +180744,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#G_PA4891">
+            <rdf:Description rdf:about="#G_PA4893">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042733"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042736"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171039,7 +180775,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4864" sboTerm="SBO:0000243" fbc:id="G_PA4864" fbc:name="G_PA4864" fbc:label="G_PA4864">
+      <fbc:geneProduct metaid="G_PA4891" sboTerm="SBO:0000243" fbc:id="G_PA4891" fbc:name="G_PA4891" fbc:label="G_PA4891">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171047,18 +180783,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4864">
+            <rdf:Description rdf:about="#G_PA4891">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042733"/>
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           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4865" sboTerm="SBO:0000243" fbc:id="G_PA4865" fbc:name="G_PA4865" fbc:label="G_PA4865">
+      <fbc:geneProduct metaid="G_PA4868" sboTerm="SBO:0000243" fbc:id="G_PA4868" fbc:name="G_PA4868" fbc:label="G_PA4868">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171066,11 +180802,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4865">
+            <rdf:Description rdf:about="#G_PA4868">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042708"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042749"/>
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               </bqbiol:is>
             </rdf:Description>
@@ -171096,7 +180832,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4868" sboTerm="SBO:0000243" fbc:id="G_PA4868" fbc:name="G_PA4868" fbc:label="G_PA4868">
+      <fbc:geneProduct metaid="G_PA4867" sboTerm="SBO:0000243" fbc:id="G_PA4867" fbc:name="G_PA4867" fbc:label="G_PA4867">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171104,18 +180840,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4868">
+            <rdf:Description rdf:about="#G_PA4867">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042747"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4893" sboTerm="SBO:0000243" fbc:id="G_PA4893" fbc:name="G_PA4893" fbc:label="G_PA4893">
+      <fbc:geneProduct metaid="G_PA4865" sboTerm="SBO:0000243" fbc:id="G_PA4865" fbc:name="G_PA4865" fbc:label="G_PA4865">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171123,19 +180859,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4893">
+            <rdf:Description rdf:about="#G_PA4865">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899102"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042708"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042708"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA1497" sboTerm="SBO:0000243" fbc:id="G_PA1497" fbc:name="G_PA1497" fbc:label="G_PA1497">
+      <fbc:geneProduct metaid="G_PA4864" sboTerm="SBO:0000243" fbc:id="G_PA4864" fbc:name="G_PA4864" fbc:label="G_PA4864">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171143,18 +180878,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA1497">
+            <rdf:Description rdf:about="#G_PA4864">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041808"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042723"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4860" sboTerm="SBO:0000243" fbc:id="G_PA4860" fbc:name="G_PA4860" fbc:label="G_PA4860">
+      <fbc:geneProduct metaid="G_PA1497" sboTerm="SBO:0000243" fbc:id="G_PA1497" fbc:name="G_PA1497" fbc:label="G_PA1497">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171162,18 +180897,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4860">
+            <rdf:Description rdf:about="#G_PA1497">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041808"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4861" sboTerm="SBO:0000243" fbc:id="G_PA4861" fbc:name="G_PA4861" fbc:label="G_PA4861">
+      <fbc:geneProduct metaid="G_PA4859" sboTerm="SBO:0000243" fbc:id="G_PA4859" fbc:name="G_PA4859" fbc:label="G_PA4859">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171181,25 +180916,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4861">
+            <rdf:Description rdf:about="#G_PA4859">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041853"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041898"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3364" sboTerm="SBO:0000243" fbc:id="G_PA3364" fbc:name="G_PA3364" fbc:label="G_PA3364">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4859" sboTerm="SBO:0000243" fbc:id="G_PA4859" fbc:name="G_PA4859" fbc:label="G_PA4859">
+      <fbc:geneProduct metaid="G_PA4860" sboTerm="SBO:0000243" fbc:id="G_PA4860" fbc:name="G_PA4860" fbc:label="G_PA4860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171207,11 +180935,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4859">
+            <rdf:Description rdf:about="#G_PA4860">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041898"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043002"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171237,7 +180965,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4858" sboTerm="SBO:0000243" fbc:id="G_PA4858" fbc:name="G_PA4858" fbc:label="G_PA4858">
+      <fbc:geneProduct metaid="G_PA4861" sboTerm="SBO:0000243" fbc:id="G_PA4861" fbc:name="G_PA4861" fbc:label="G_PA4861">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171245,18 +180973,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4858">
+            <rdf:Description rdf:about="#G_PA4861">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042286"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041853"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3362" sboTerm="SBO:0000243" fbc:id="G_PA3362" fbc:name="G_PA3362" fbc:label="G_PA3362">
+      <fbc:geneProduct metaid="G_PA3364" sboTerm="SBO:0000243" fbc:id="G_PA3364" fbc:name="G_PA3364" fbc:label="G_PA3364">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA4858" sboTerm="SBO:0000243" fbc:id="G_PA4858" fbc:name="G_PA4858" fbc:label="G_PA4858">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171264,17 +180999,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3362">
+            <rdf:Description rdf:about="#G_PA4858">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042286"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042286"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3328" sboTerm="SBO:0000243" fbc:id="G_PA3328" fbc:name="G_PA3328" fbc:label="G_PA3328">
+      <fbc:geneProduct metaid="G_PA3362" sboTerm="SBO:0000243" fbc:id="G_PA3362" fbc:name="G_PA3362" fbc:label="G_PA3362">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171282,11 +181018,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA3328">
+            <rdf:Description rdf:about="#G_PA3362">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899995"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171363,7 +181098,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4905" sboTerm="SBO:0000243" fbc:id="G_PA4905" fbc:name="G_PA4905" fbc:label="G_PA4905">
+      <fbc:geneProduct metaid="G_PA4904" sboTerm="SBO:0000243" fbc:id="G_PA4904" fbc:name="G_PA4904" fbc:label="G_PA4904">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171371,18 +181106,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4905">
+            <rdf:Description rdf:about="#G_PA4904">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046507"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA4904" sboTerm="SBO:0000243" fbc:id="G_PA4904" fbc:name="G_PA4904" fbc:label="G_PA4904">
+      <fbc:geneProduct metaid="G_PA4905" sboTerm="SBO:0000243" fbc:id="G_PA4905" fbc:name="G_PA4905" fbc:label="G_PA4905">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171390,11 +181125,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA4904">
+            <rdf:Description rdf:about="#G_PA4905">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046507"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046180"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171479,20 +181214,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA3179" sboTerm="SBO:0000243" fbc:id="G_PA3179" fbc:name="G_PA3179" fbc:label="G_PA3179">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA2975" sboTerm="SBO:0000243" fbc:id="G_PA2975" fbc:name="G_PA2975" fbc:label="G_PA2975">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA3114" sboTerm="SBO:0000243" fbc:id="G_PA3114" fbc:name="G_PA3114" fbc:label="G_PA3114">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -171517,6 +181238,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA2975" sboTerm="SBO:0000243" fbc:id="G_PA2975" fbc:name="G_PA2975" fbc:label="G_PA2975">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA4742" sboTerm="SBO:0000243" fbc:id="G_PA4742" fbc:name="G_PA4742" fbc:label="G_PA4742">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -171524,6 +181252,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_PA3179" sboTerm="SBO:0000243" fbc:id="G_PA3179" fbc:name="G_PA3179" fbc:label="G_PA3179">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_PA0733" sboTerm="SBO:0000243" fbc:id="G_PA0733" fbc:name="G_PA0733" fbc:label="G_PA0733">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -171538,7 +181273,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5252" sboTerm="SBO:0000243" fbc:id="G_PA5252" fbc:name="G_PA5252" fbc:label="G_PA5252">
+      <fbc:geneProduct metaid="G_PA5501" sboTerm="SBO:0000243" fbc:id="G_PA5501" fbc:name="G_PA5501" fbc:label="G_PA5501">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171546,13 +181281,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5252">
+            <rdf:Description rdf:about="#G_PA5501">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIC2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043608"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -171578,7 +181311,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5501" sboTerm="SBO:0000243" fbc:id="G_PA5501" fbc:name="G_PA5501" fbc:label="G_PA5501">
+      <fbc:geneProduct metaid="G_PA5498" sboTerm="SBO:0000243" fbc:id="G_PA5498" fbc:name="G_PA5498" fbc:label="G_PA5498">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171586,18 +181319,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5501">
+            <rdf:Description rdf:about="#G_PA5498">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043613"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_PA5498" sboTerm="SBO:0000243" fbc:id="G_PA5498" fbc:name="G_PA5498" fbc:label="G_PA5498">
+      <fbc:geneProduct metaid="G_PA5252" sboTerm="SBO:0000243" fbc:id="G_PA5252" fbc:name="G_PA5252" fbc:label="G_PA5252">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -171605,11 +181338,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_PA5498">
+            <rdf:Description rdf:about="#G_PA5252">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043613"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIC2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174898"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
diff --git a/carveme/data/benchmark/models/rsol.xml b/carveme/data/benchmark/models/rsol.xml
index 6a5432b..0eccb18 100644
--- a/carveme/data/benchmark/models/rsol.xml
+++ b/carveme/data/benchmark/models/rsol.xml
@@ -3,7 +3,7 @@
   <model metaid="rsol" id="rsol" fbc:strict="true">
     <notes>
       <html xmlns="http://www.w3.org/1999/xhtml">
-        <p>Description: This model was built with CarveMe version 1.4.1</p>
+        <p>Description: This model was built with CarveMe version 1.5.0</p>
       </html>
     </notes>
     <listOfCompartments>
@@ -183,6 +183,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_12dgr160_c" sboTerm="SBO:0000247" id="M_12dgr160_c" name="1,2-Diacyl-sn-glycerol (dihexadecanoyl, n-C16:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C35H68O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C35H68O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr160_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3132"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_12dgr161_c" sboTerm="SBO:0000247" id="M_12dgr161_c" name="1,2-Diacyl-sn-glycerol (dihexadec-9-enoyl, n-C16:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C35H64O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -263,6 +283,26 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_12dgr181_c" sboTerm="SBO:0000247" id="M_12dgr181_c" name="1,2-Diacyl-sn-glycerol (dioctadec-11-enoyl, n-C18:1)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C39H72O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C39H72O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_12dgr181_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3775"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_12ppd__S_c" sboTerm="SBO:0000247" id="M_12ppd__S_c" name="(S)-Propane-1,2-diol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H8O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -498,6 +538,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_15dap_e" sboTerm="SBO:0000247" id="M_15dap_e" name="1,5-Diaminopentane" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C5H16N2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H16N2</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_15dap_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CADAVERINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM943"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VHRGRCVQAFMJIZ-UHFFFAOYSA-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01155"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_15dap_p" sboTerm="SBO:0000247" id="M_15dap_p" name="1,5-Diaminopentane" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C5H16N2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H16N2</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_15dap_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CADAVERINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM943"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VHRGRCVQAFMJIZ-UHFFFAOYSA-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01155"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_1agpe181_p" sboTerm="SBO:0000247" id="M_1agpe181_p" name="1-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C23H46NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -633,6 +735,44 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_1pipdn2c_c" sboTerm="SBO:0000247" id="M_1pipdn2c_c" name="Delta1-Piperideine-2-carboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_1pipdn2c_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10539"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77631"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GEJXSVNGWOSZPC-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62778"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DELTA1-PIPERIDEINE-2-CARBOXYLATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00922"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_1py4h3c_c" sboTerm="SBO:0000247" id="M_1py4h3c_c" name="1 pyrroline 4 hydroxy 2 carboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H6NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2091,6 +2231,28 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2ahhmd_c" sboTerm="SBO:0000247" id="M_2ahhmd_c" name="2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine diphosphate C7H8N5O8P2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C7H8N5O8P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8N5O8P2</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2ahhmd_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FCQGJGLSOWZZON-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02920"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_2ahhmp_c" sboTerm="SBO:0000247" id="M_2ahhmp_c" name="2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine C7H9N5O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H9N5O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3522,6 +3684,89 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_2pglyc_c" sboTerm="SBO:0000247" id="M_2pglyc_c" name="2-Phosphoglycolate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2O6P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2pglyc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ASCFNMCAHFUBCO-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-67"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00727"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2pglyc_e" sboTerm="SBO:0000247" id="M_2pglyc_e" name="2-Phosphoglycolate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2O6P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_2pglyc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ASCFNMCAHFUBCO-UHFFFAOYSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11652"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-67"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00727"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_2ptcoa_c" sboTerm="SBO:0000247" id="M_2ptcoa_c" name="2 Pentenoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_2ptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_34dhbald_c" sboTerm="SBO:0000247" id="M_34dhbald_c" name="3,4-dihydroxybenzaldehyde" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3805,6 +4050,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_34dhsa_c" sboTerm="SBO:0000247" id="M_34dhsa_c" name="3,4-Dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H22O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H22O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_34dhsa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_34hpp_c" sboTerm="SBO:0000247" id="M_34hpp_c" name="3-(4-Hydroxyphenyl)pyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3909,6 +4171,40 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_3aib_c" sboTerm="SBO:0000247" id="M_3aib_c" name="L-3-Amino-isobutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H9NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3aib_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-73619"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-909779"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01100049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM786"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QCHPKSFMDHPSNR-GSVOUGTGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00886"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3amp_e" sboTerm="SBO:0000247" id="M_3amp_e" name="3  AMP C10H12N5O7P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -4126,6 +4422,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3dhgulnp_c" sboTerm="SBO:0000247" id="M_3dhgulnp_c" name="3-keto-L-gulonate-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H8O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O10P</p>
+            <p>CHARGE: -3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3dhgulnp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BDUIIKXSXFDPEC-LWKDLAHASA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C14899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-2343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10596"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3dhq_c" sboTerm="SBO:0000247" id="M_3dhq_c" name="3-Dehydroquinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H9O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5404,6 +5726,24 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_3hsa_c" sboTerm="SBO:0000247" id="M_3hsa_c" name="Secophenol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H22O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H22O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_3hsa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_3htdccoa_c" sboTerm="SBO:0000247" id="M_3htdccoa_c" name="S  3 hydroxy  7Z  tetradecenyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H56N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6640,6 +6980,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3ptcoa_c" sboTerm="SBO:0000247" id="M_3ptcoa_c" name="3 Pentenoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_3ptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_3sala_c" sboTerm="SBO:0000247" id="M_3sala_c" name="3-Sulfino-L-alanine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C3H5NO4S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6697,6 +7054,32 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_3uib_c" sboTerm="SBO:0000247" id="M_3uib_c" name="3-Ureidoisobutyrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9N2O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_3uib_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:74414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1015"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHENTZNALBMCQD-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03034"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_3ump_e" sboTerm="SBO:0000247" id="M_3ump_e" name="3  UMP C9H11N2O9P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6759,6 +7142,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_49dsha_c" sboTerm="SBO:0000247" id="M_49dsha_c" name="9,10-disecoandrosta-1(10),2-dien-4-oate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H22O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H22O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_49dsha_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4abut_c" sboTerm="SBO:0000247" id="M_4abut_c" name="4-Aminobutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7117,6 +7517,99 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4crsol_c" sboTerm="SBO:0000247" id="M_4crsol_c" name="P-Cresol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4crsol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IWDCLRJOBJJRNH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01042"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4crsol_e" sboTerm="SBO:0000247" id="M_4crsol_e" name="P-Cresol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4crsol_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IWDCLRJOBJJRNH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01042"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4crsol_p" sboTerm="SBO:0000247" id="M_4crsol_p" name="P-Cresol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H8O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H8O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4crsol_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01858"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13762"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IWDCLRJOBJJRNH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01042"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4fe4s_c" sboTerm="SBO:0000247" id="M_4fe4s_c" name="[4Fe-4S] iron-sulfur cluster" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Fe4S4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7394,6 +7887,66 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hbald_e" sboTerm="SBO:0000247" id="M_4hbald_e" name="4-Hydroxybenzaldehyde" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_4hbald_p" sboTerm="SBO:0000247" id="M_4hbald_p" name="4-Hydroxybenzaldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H6O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H6O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hbald_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43009"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11718"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4-HYDROXYBENZALDEHYDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM577"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RGHHSNMVTDWUBI-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00484"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4hbz_c" sboTerm="SBO:0000247" id="M_4hbz_c" name="4-Hydroxybenzoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7527,6 +8080,34 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hoxoh_c" sboTerm="SBO:0000247" id="M_4hoxoh_c" name="4-Hydroxy-2-oxohexanoic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H9O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4hoxoh_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ALFQPWXBAWHVDP-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01050343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04141"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4hphac_c" sboTerm="SBO:0000247" id="M_4hphac_c" name="4-Hydroxyphenylacetate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7766,6 +8347,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4hptcoa_c" sboTerm="SBO:0000247" id="M_4hptcoa_c" name="4 Hydroxypentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H40N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H40N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4hptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4izp_c" sboTerm="SBO:0000247" id="M_4izp_c" name="4-Imidazolone-5-propanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H7N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7802,6 +8400,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4mhetz_c" sboTerm="SBO:0000247" id="M_4mhetz_c" name="4-Methyl-5-(2-hydroxyethyl)-thiazole" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9NOS">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H9NOS</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4mhetz_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BKAWJIRCKVUVED-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB32985"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THZ"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02636"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4mlacac_c" sboTerm="SBO:0000247" id="M_4mlacac_c" name="4 Maleylacetoacetate C8H6O6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H6O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7900,6 +8530,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4oxptcoa_c" sboTerm="SBO:0000247" id="M_4oxptcoa_c" name="4 Oxopentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H38N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_4oxptn_c" sboTerm="SBO:0000247" id="M_4oxptn_c" name="4 Oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptn_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_4oxptn_e" sboTerm="SBO:0000247" id="M_4oxptn_e" name="4 Oxopentanoate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptn_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_4oxptn_p" sboTerm="SBO:0000247" id="M_4oxptn_p" name="4 Oxopentanoate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H7O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H7O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4oxptn_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4pasp_c" sboTerm="SBO:0000247" id="M_4pasp_c" name="4-Phospho-L-aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H6NO7P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -7963,6 +8661,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4poptcoa_c" sboTerm="SBO:0000247" id="M_4poptcoa_c" name="4 Phosphooxypentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H39N7O21P4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C26H39N7O21P4S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_4poptcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_4ppan_c" sboTerm="SBO:0000247" id="M_4ppan_c" name="D-4&apos;-Phosphopantothenate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C9H15NO8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8060,6 +8775,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_56dthm_c" sboTerm="SBO:0000247" id="M_56dthm_c" name="5,6-Dihydrothymine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H8N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8N2O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_56dthm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-73541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDRO-THYMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM772"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NBAKTGXDIBVZOO-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00673"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_56dura_c" sboTerm="SBO:0000247" id="M_56dura_c" name="5,6-dihydrouracil" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H6N2O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8907,6 +9651,24 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_5ohhipcoa_c" sboTerm="SBO:0000247" id="M_5ohhipcoa_c" name="5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H52N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H52N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_5ohhipcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_5oxpro_c" sboTerm="SBO:0000247" id="M_5oxpro_c" name="5-Oxoproline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H6NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9133,6 +9895,96 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_6hnac_c" sboTerm="SBO:0000247" id="M_6hnac_c" name="6-Hydroxynicotinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_6hnac_e" sboTerm="SBO:0000247" id="M_6hnac_e" name="6-Hydroxynicotinate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_6hnac_p" sboTerm="SBO:0000247" id="M_6hnac_p" name="6-Hydroxynicotinate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_6hnac_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BLHCMGRVFXRYRN-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20731"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02658"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:6-HYDROXY-NICOTINATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_6p2dhglcn_c" sboTerm="SBO:0000247" id="M_6p2dhglcn_c" name="6-Phospho-2-dehydro-D-gluconate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H11O10P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9228,6 +10080,24 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_9ohadd_c" sboTerm="SBO:0000247" id="M_9ohadd_c" name="9alpha-Hydroxyandrosta-1,4-diene-3,17-dione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H22O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H22O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_9ohadd_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_ACP_c" sboTerm="SBO:0000247" id="M_ACP_c" name="Acyl carrier protein" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C384H603N96O142PS3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9698,6 +10568,39 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_Lpipecol_c" sboTerm="SBO:0000247" id="M_Lpipecol_c" name="L-pipecolic acid; piperidine-2-carboxylic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H11NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_Lpipecol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00408"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61185"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00716"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXEACLLIILLPRG-YFKPBYRVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-PIPECOLATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00323"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_R3hdec4coa_c" sboTerm="SBO:0000247" id="M_R3hdec4coa_c" name=" 3 Hydroxy 4Z decenoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H48N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -9874,40 +10777,6 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
-      <species metaid="M_R_3hdcaa_e" sboTerm="SBO:0000247" id="M_R_3hdcaa_e" name=" 3 hydroxydecanoic acid" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H19O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C10H19O3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#M_R_3hdcaa_e">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-      </species>
-      <species metaid="M_R_3hdcaa_p" sboTerm="SBO:0000247" id="M_R_3hdcaa_p" name=" 3 hydroxydecanoic acid" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H19O3">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C10H19O3</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#M_R_3hdcaa_p">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-      </species>
       <species metaid="M_R_3hdcoa_c" sboTerm="SBO:0000247" id="M_R_3hdcoa_c" name="(R)-Hydroxydecanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C31H50N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -10041,6 +10910,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_R_3hhdca_c" sboTerm="SBO:0000247" id="M_R_3hhdca_c" name=" 3 Hydroxyhexadecanoic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H31O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H31O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3hhdca_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_R_3hhdcoa_c" sboTerm="SBO:0000247" id="M_R_3hhdcoa_c" name=" 3 Hydroxyhexadecanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C37H62N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -11279,6 +12165,66 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_acgal1p_e" sboTerm="SBO:0000247" id="M_acgal1p_e" name="N-Acetyl-D-galactosamine 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H14NO9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H14NO9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_acgal1p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C18060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:55404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61970"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FZLJPEPAYPUMMR-JAJWTYFOSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-7246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd18043"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
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+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
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+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd18043"/>
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@@ -11305,120 +12251,96 @@
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+      <species metaid="M_acgam1p_e" sboTerm="SBO:0000247" id="M_acgam1p_e" name="N-Acetyl-D-glucosamine 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H14NO9P">
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             <p>FORMULA: C8H14NO9P</p>
-            <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
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+            <rdf:Description rdf:about="#M_acgam1p_e">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-532204"/>
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+      <species metaid="M_acgam1p_p" sboTerm="SBO:0000247" id="M_acgam1p_p" name="N-Acetyl-D-glucosamine 1-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C8H14NO9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C8H15NO6</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C8H14NO9P</p>
             <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
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+            <rdf:Description rdf:about="#M_acgam1p_p">
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+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04256"/>
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+      <species metaid="M_acgam6p_c" sboTerm="SBO:0000247" id="M_acgam6p_c" name="N-Acetyl-D-glucosamine 6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H14NO9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C8H15NO6</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C8H14NO9P</p>
+            <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
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+            <rdf:Description rdf:about="#M_acgam6p_c">
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+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02817"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-ACETYL-D-GLUCOSAMINE-6-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM63556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00293"/>
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+      <species metaid="M_acgam_c" sboTerm="SBO:0000247" id="M_acgam_c" name="N-Acetyl-D-glucosamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C8H15NO6</p>
@@ -11428,7 +12350,83 @@
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-            <rdf:Description rdf:about="#M_acgam_p">
+            <rdf:Description rdf:about="#M_acgam_c">
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+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-acetyl-D-glucosamine"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM143"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OVRNDRQMDRJTHS-RTRLPJTCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27608"/>
+                </rdf:Bag>
+              </bqbiol:is>
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+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_acgam_e" sboTerm="SBO:0000247" id="M_acgam_e" name="N-Acetyl-D-glucosamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H15NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_acgam_e">
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-acetyl-D-glucosamine"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM143"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OVRNDRQMDRJTHS-RTRLPJTCSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27608"/>
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+        </annotation>
+      </species>
+      <species metaid="M_acgam_p" sboTerm="SBO:0000247" id="M_acgam_p" name="N-Acetyl-D-glucosamine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H15NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H15NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_acgam_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1678743"/>
@@ -12297,6 +13295,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_adn_e" sboTerm="SBO:0000247" id="M_adn_e" name="Adenosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H13N5O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_adn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83909"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8857850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13734"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2472"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB04401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB04402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB04421"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADENOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM212"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OIRDTQYFTABQOQ-KQYNXXCUSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00182"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_adn_p" sboTerm="SBO:0000247" id="M_adn_p" name="Adenosine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -12523,6 +13561,90 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ag_c" sboTerm="SBO:0000247" id="M_ag_c" name="Silver" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Ag">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Ag</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ag_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49468"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FOIXSVOLVBLSDH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AG+"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ag_e" sboTerm="SBO:0000247" id="M_ag_e" name="Silver" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Ag">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Ag</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ag_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49468"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FOIXSVOLVBLSDH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AG+"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ag_p" sboTerm="SBO:0000247" id="M_ag_p" name="Silver" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Ag">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Ag</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ag_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49468"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FOIXSVOLVBLSDH-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AG+"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM5928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd04100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_agm_e" sboTerm="SBO:0000247" id="M_agm_e" name="Agmatine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C5H16N4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -13868,6 +14990,44 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_andrs14dn317dn_c" sboTerm="SBO:0000247" id="M_andrs14dn317dn_c" name="Androsta-1,4-diene-3,17-dione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H22O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H22O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_andrs14dn317dn_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_andrstndn_c" sboTerm="SBO:0000247" id="M_andrstndn_c" name="Androst-4-ene-3,17-dione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C19H24O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C19H24O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_andrstndn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM162523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_anhgm3p_c" sboTerm="SBO:0000247" id="M_anhgm3p_c" name="N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H52N6O19">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -14777,47 +15937,116 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_asn__L_c" sboTerm="SBO:0000247" id="M_asn__L_c" name="L-Asparagine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
+      <species metaid="M_ascb6p_c" sboTerm="SBO:0000247" id="M_ascb6p_c" name="L-ascorbate-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H7O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C4H8N2O3</p>
-            <p>CHARGE: 0</p>
+            <p>FORMULA: C6H7O9P</p>
+            <p>CHARGE: -2</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_asn__L_c">
+            <rdf:Description rdf:about="#M_ascb6p_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29642"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379703"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00152"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16438"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13083"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21242"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22653"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32650"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32651"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32661"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6191"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DCXYFEDJOCDNAF-REOHCLBHSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00168"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00132"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:80368"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KIENGQUGHPTFGC-JLAZNSOCSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-ASCORBATE-6-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14905"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_asn__L_e" sboTerm="SBO:0000247" id="M_asn__L_e" name="L-Asparagine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
+      <species metaid="M_ascb__L_e" sboTerm="SBO:0000247" id="M_ascb__L_e" name="L-Ascorbate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ascb__L_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C20364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:38290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43473"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CIWBSHSKHKDKBQ-JLAZNSOCSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB29945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASCORBATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00059"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ascb__L_p" sboTerm="SBO:0000247" id="M_ascb__L_p" name="L-Ascorbate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O6</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ascb__L_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-198836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C20364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13861"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17208"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:38290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43473"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CIWBSHSKHKDKBQ-JLAZNSOCSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00044"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB14273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB29945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASCORBATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00059"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_asn__L_c" sboTerm="SBO:0000247" id="M_asn__L_c" name="L-Asparagine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C4H8N2O3</p>
@@ -14827,7 +16056,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_asn__L_e">
+            <rdf:Description rdf:about="#M_asn__L_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29642"/>
@@ -14857,7 +16086,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_asn__L_p" sboTerm="SBO:0000247" id="M_asn__L_p" name="L-Asparagine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
+      <species metaid="M_asn__L_e" sboTerm="SBO:0000247" id="M_asn__L_e" name="L-Asparagine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C4H8N2O3</p>
@@ -14867,7 +16096,47 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_asn__L_p">
+            <rdf:Description rdf:about="#M_asn__L_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-379703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13083"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32650"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6191"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DCXYFEDJOCDNAF-REOHCLBHSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00168"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15142"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_asn__L_p" sboTerm="SBO:0000247" id="M_asn__L_p" name="L-Asparagine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H8N2O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_asn__L_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29642"/>
@@ -15142,38 +16411,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_asp__D_e" sboTerm="SBO:0000247" id="M_asp__D_e" name="D-Aspartate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C4H6NO4</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_asp__D_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00402"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12918"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17364"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20920"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29994"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4108"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CKLJMWTZIZZHCS-UWTATZPHSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-302"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM974"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00320"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_asp__L_c" sboTerm="SBO:0000247" id="M_asp__L_c" name="L-Aspartate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -16643,6 +17880,24 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cchol_c" sboTerm="SBO:0000247" id="M_cchol_c" name="26-Carboxycholest-4-en-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H40O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H40O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 4.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cchol_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_cd2_c" sboTerm="SBO:0000247" id="M_cd2_c" name="Cadmium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Cd">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -16936,33 +18191,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_cenchddd_c" sboTerm="SBO:0000247" id="M_cenchddd_c" name="Cis-3-(3-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H9O4">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C9H9O4</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_cenchddd_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AEUBLTTWYCDTGM-HXOXMVQHSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C12622"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49071"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60108"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61462"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2161"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd09253"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_cgly_c" sboTerm="SBO:0000247" id="M_cgly_c" name="Cys Gly C5H10N2O3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17053,6 +18281,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_chol4en3one_c" sboTerm="SBO:0000247" id="M_chol4en3one_c" name="Cholest-4-en-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H44O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H44O</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_chol4en3one_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_chol_c" sboTerm="SBO:0000247" id="M_chol_c" name="Choline C5H14NO" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C5H14NO">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17161,6 +18406,170 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cholc3coa_c" sboTerm="SBO:0000247" id="M_cholc3coa_c" name="CoA-cholest-4-en-3-one C3 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C43H64N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C43H64N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cholc3coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_cholc5coa_c" sboTerm="SBO:0000247" id="M_cholc5coa_c" name="CoA-cholest-4-en-3-one C5 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C45H68N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C45H68N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cholc5coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_cholc8coa_c" sboTerm="SBO:0000247" id="M_cholc8coa_c" name="CoA-cholest-4-en-3-one C8 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C48H74N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C48H74N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 4.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cholc8coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_cholenec3coa_c" sboTerm="SBO:0000247" id="M_cholenec3coa_c" name="CoA-20-ene-cholest-4-en-3-one C5 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C43H62N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C43H62N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cholenec3coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_cholenec5coa_c" sboTerm="SBO:0000247" id="M_cholenec5coa_c" name="CoA-22-ene-cholest-4-en-3-one C5 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C45H66N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C45H66N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cholenec5coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_cholenec8coa_c" sboTerm="SBO:0000247" id="M_cholenec8coa_c" name="CoA-24-ene-cholest-4-en-3-one C8 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C48H72N7O18P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C48H72N7O18P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_cholenec8coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_chols_c" sboTerm="SBO:0000247" id="M_chols_c" name="Choline sulfate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H13NO4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H13NO4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chols_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:52859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1547"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WXCQAWGXWVRCGP-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00681"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_chols_e" sboTerm="SBO:0000247" id="M_chols_e" name="Choline sulfate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H13NO4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H13NO4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chols_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:52859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1547"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WXCQAWGXWVRCGP-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00681"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_chor_c" sboTerm="SBO:0000247" id="M_chor_c" name="Chorismate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C10H8O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17193,6 +18602,160 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_chsterol_c" sboTerm="SBO:0000247" id="M_chsterol_c" name="Chsterol c" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C27H46O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H46O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chsterol_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-163586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-171095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-171149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-174672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-176478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-193156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-193384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-193840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-216762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8848047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62453"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HVYWMOMLDIMFJA-DPAQBDIFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMST01010001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMST01010093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHOLESTEROL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00160"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_chsterol_e" sboTerm="SBO:0000247" id="M_chsterol_e" name="Chsterol c" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C27H46O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H46O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chsterol_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-163586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-171095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-171149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-174672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-176478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-193156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-193384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-193840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-216762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8848047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00187"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00507"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62453"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HVYWMOMLDIMFJA-DPAQBDIFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMST01010001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMST01010093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHOLESTEROL"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00160"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_chtbs6p_c" sboTerm="SBO:0000247" id="M_chtbs6p_c" name="Diacetylchitobiose-6-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C16H27N2O14P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H27N2O14P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chtbs6p_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C21152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:64897"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KYKNQNQCPWDNAK-CBTAGEKQSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIACETYLCHITOBIOSE-6-PHOSPHATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM11353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd26854"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_chtbs_e" sboTerm="SBO:0000247" id="M_chtbs_e" name="N,N&apos;-diacetylchitobiose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H28N2O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H28N2O11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chtbs_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM722863"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_chtbs_p" sboTerm="SBO:0000247" id="M_chtbs_p" name="N,N&apos;-diacetylchitobiose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C16H28N2O11">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H28N2O11</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_chtbs_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM722863"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cinmcoa_c" sboTerm="SBO:0000247" id="M_cinmcoa_c" name="Cinnamoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30H38N7O17P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17253,6 +18816,92 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cinnm_e" sboTerm="SBO:0000247" id="M_cinnm_e" name="Trans-Cinnamate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H7O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cinnm_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C10438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM438"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WBYWAXJHAXSJNI-VOTSOKGWSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd07326"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cinnm_p" sboTerm="SBO:0000247" id="M_cinnm_p" name="Trans-Cinnamate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H7O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H7O2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cinnm_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00423"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C10438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00567"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-674"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM438"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WBYWAXJHAXSJNI-VOTSOKGWSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd07326"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cit_c" sboTerm="SBO:0000247" id="M_cit_c" name="Citrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-3" fbc:chemicalFormula="C6H5O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -17917,6 +19566,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cmcbtt_e" sboTerm="SBO:0000247" id="M_cmcbtt_e" name="Carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33H48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cmcbtt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15940"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_cmcbtt_p" sboTerm="SBO:0000247" id="M_cmcbtt_p" name="Carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33H48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33H48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cmcbtt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15940"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cmp_c" sboTerm="SBO:0000247" id="M_cmp_c" name="CMP C9H12N3O8P" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18155,6 +19844,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_co_p" sboTerm="SBO:0000247" id="M_co_p" name="Carbon monoxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_co_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3282"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03398"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBON-MONOXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM10881"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UGFAIRIUMAVXCW-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00204"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_coa_c" sboTerm="SBO:0000247" id="M_coa_c" name="Coenzyme A" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C21H32N7O16P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -18472,61 +20195,100 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_crn__D_c" sboTerm="SBO:0000247" id="M_crn__D_c" name="D-Carnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+      <species metaid="M_creat_c" sboTerm="SBO:0000247" id="M_creat_c" name="Creatine cytosol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9N3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H15NO3</p>
+            <p>FORMULA: C4H9N3O2</p>
             <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_crn__D_c">
+            <rdf:Description rdf:about="#M_creat_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11060"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51453"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-CARNITINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM246"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-LURJTMIESA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10719"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03600"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DDRJAANPRJIHGJ-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CREATININE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00585"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_crn__D_p" sboTerm="SBO:0000247" id="M_crn__D_p" name="D-Carnitine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+      <species metaid="M_creat_e" sboTerm="SBO:0000247" id="M_creat_e" name="Creatine cytosol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9N3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H15NO3</p>
+            <p>FORMULA: C4H9N3O2</p>
             <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_crn__D_p">
+            <rdf:Description rdf:about="#M_creat_e">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11060"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51453"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-CARNITINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM246"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-LURJTMIESA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10719"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03600"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DDRJAANPRJIHGJ-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CREATININE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00585"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_crn_c" sboTerm="SBO:0000247" id="M_crn_c" name="L-Carnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+      <species metaid="M_creat_p" sboTerm="SBO:0000247" id="M_creat_p" name="Creatine cytosol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9N3O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H9N3O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_creat_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30733"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00791"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D03600"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DDRJAANPRJIHGJ-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CREATININE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00585"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn__D_c" sboTerm="SBO:0000247" id="M_crn__D_c" name="D-Carnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C7H15NO3</p>
@@ -18536,44 +20298,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_crn_c">
+            <rdf:Description rdf:about="#M_crn__D_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-201023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549207"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6202"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01467"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62496"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNITINE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM173"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM246"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-LURJTMIESA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10719"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_crn_e" sboTerm="SBO:0000247" id="M_crn_e" name="L-Carnitine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+      <species metaid="M_crn__D_p" sboTerm="SBO:0000247" id="M_crn__D_p" name="D-Carnitine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C7H15NO3</p>
@@ -18583,44 +20325,24 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_crn_e">
+            <rdf:Description rdf:about="#M_crn__D_p">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
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-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:51453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM246"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-LURJTMIESA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd10719"/>
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               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_crn_p" sboTerm="SBO:0000247" id="M_crn_p" name="L-Carnitine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+      <species metaid="M_crn_c" sboTerm="SBO:0000247" id="M_crn_c" name="L-Carnitine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C7H15NO3</p>
@@ -18630,7 +20352,101 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_crn_p">
+            <rdf:Description rdf:about="#M_crn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-201023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM173"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn_e" sboTerm="SBO:0000247" id="M_crn_e" name="L-Carnitine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-201023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-390294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-549207"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13091"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20047"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARNITINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM173"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PHIQHXFUZVPYII-ZCFIWIBFSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19003"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_crn_p" sboTerm="SBO:0000247" id="M_crn_p" name="L-Carnitine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H15NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H15NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_crn_p">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-164988"/>
@@ -18836,6 +20652,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ctncoa_c" sboTerm="SBO:0000247" id="M_ctncoa_c" name="Crotonyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H40N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H40N7O17P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ctncoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_ctp_c" sboTerm="SBO:0000247" id="M_ctp_c" name="CTP C9H12N3O14P3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O14P3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -19420,6 +21253,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_cyst__L_e" sboTerm="SBO:0000247" id="M_cyst__L_e" name="L-Cystathionine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H14N2O4S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_cyst__L_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1614518"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03614"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ILRYLPWNYFXEMH-WHFBIAKZSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-CYSTATHIONINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19019"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_cytd_c" sboTerm="SBO:0000247" id="M_cytd_c" name="Cytidine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20497,6 +22362,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dgsn_e" sboTerm="SBO:0000247" id="M_dgsn_e" name="Deoxyguanosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H13N5O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dgsn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYGUANOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM647"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YKBGVTZYEHREMT-KVQBGUIXSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00277"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dgsn_p" sboTerm="SBO:0000247" id="M_dgsn_p" name="Deoxyguanosine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H13N5O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dgsn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00085"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYGUANOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM647"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YKBGVTZYEHREMT-KVQBGUIXSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00277"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dgtp_c" sboTerm="SBO:0000247" id="M_dgtp_c" name="DGTP C10H12N5O13P3" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20559,6 +22492,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dha_e" sboTerm="SBO:0000247" id="M_dha_e" name="Dihydroxyacetone" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dha_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYACETONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM460"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RXKJFZQQPQGTFL-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00157"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dha_p" sboTerm="SBO:0000247" id="M_dha_p" name="Dihydroxyacetone" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dha_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:24354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYACETONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM460"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RXKJFZQQPQGTFL-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00157"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhap_c" sboTerm="SBO:0000247" id="M_dhap_c" name="Dihydroxyacetone phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20691,6 +22686,33 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhgly_c" sboTerm="SBO:0000247" id="M_dhgly_c" name="Dehydroglycine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C2H2NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H2NO2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhgly_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53647"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:77846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12279"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1984"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/TVMUHOAONWHJBV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14545"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dhlam_c" sboTerm="SBO:0000247" id="M_dhlam_c" name="Dihydrolipoamide C8H17NOS2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H17NOS2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -20927,6 +22949,60 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dhptd_c" sboTerm="SBO:0000247" id="M_dhptd_c" name="4,5-dihydroxy-2,3-pentanedione" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H8O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhptd_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DIHYDROXYPENTANEDIONE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2449"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UYTRITJAZOPLCZ-BYPYZUCNSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08638"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dhpyr_c" sboTerm="SBO:0000247" id="M_dhpyr_c" name="2,5-Dihydroxypyridine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H5NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H5NO2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dhpyr_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:937"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CHGPEDOMXOLANF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-5-DIHYDROXYPYRIDINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM888"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00778"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_diact_c" sboTerm="SBO:0000247" id="M_diact_c" name="Diacetyl C4H6O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H6O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21026,6 +23102,101 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_din_e" sboTerm="SBO:0000247" id="M_din_e" name="Deoxyinosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H12N4O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_din_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4413"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYINOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM935"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VGONTNSXDCQUGY-RRKCRQDMSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03279"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_din_p" sboTerm="SBO:0000247" id="M_din_p" name="Deoxyinosine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H12N4O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_din_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43436"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43437"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4413"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DEOXYINOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM935"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VGONTNSXDCQUGY-RRKCRQDMSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03279"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ditp_c" sboTerm="SBO:0000247" id="M_ditp_c" name="DITP(4-)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O13P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O13P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ditp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19251"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DITP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1325"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UFJPAQSLHAGEBL-RRKCRQDMSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00977"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_dkdi_c" sboTerm="SBO:0000247" id="M_dkdi_c" name="D-2,3-Diketo 4-deoxy-epi-inositol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21369,6 +23540,80 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dopa_e" sboTerm="SBO:0000247" id="M_dopa_e" name="Dopamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12NO2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dopa_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-380873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DOPAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM205"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VYFYYTLLBUKUHU-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02357"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dopa_p" sboTerm="SBO:0000247" id="M_dopa_p" name="Dopamine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12NO2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dopa_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-351601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-380873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D07870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DOPAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM205"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VYFYYTLLBUKUHU-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02357"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_doxrbcn_e" sboTerm="SBO:0000247" id="M_doxrbcn_e" name="Doxorubicin" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C27H30NO11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -21848,6 +24093,90 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_dxyl_c" sboTerm="SBO:0000247" id="M_dxyl_c" name="1-deoxy-D-xylulose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dxyl_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGUZJYCAXLYZEE-RFZPGFLSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dxyl_e" sboTerm="SBO:0000247" id="M_dxyl_e" name="1-deoxy-D-xylulose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dxyl_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGUZJYCAXLYZEE-RFZPGFLSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_dxyl_p" sboTerm="SBO:0000247" id="M_dxyl_p" name="1-deoxy-D-xylulose" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_dxyl_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06257"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01292"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IGUZJYCAXLYZEE-RFZPGFLSSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_e4hglu_c" sboTerm="SBO:0000247" id="M_e4hglu_c" name="L erythro 4 Hydroxyglutamate C5H8NO5" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H8NO5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22064,6 +24393,74 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_etha_e" sboTerm="SBO:0000247" id="M_etha_e" name="Ethanolamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C2H8NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H8NO</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_etha_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14223"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:272066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62693"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HZAXFHJVJLSVMW-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ETHANOL-AMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00162"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_etha_p" sboTerm="SBO:0000247" id="M_etha_p" name="Ethanolamine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C2H8NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C2H8NO</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_etha_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14223"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:272066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00149"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62693"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HZAXFHJVJLSVMW-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ETHANOL-AMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00162"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ethso3_c" sboTerm="SBO:0000247" id="M_ethso3_c" name="Ethanesulfonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C2H5O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22580,6 +24977,46 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fcmcbtt_e" sboTerm="SBO:0000247" id="M_fcmcbtt_e" name="Iron(III) chelated carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33FeH48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33FeH48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fcmcbtt_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM11903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15952"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_fcmcbtt_p" sboTerm="SBO:0000247" id="M_fcmcbtt_p" name="Iron(III) chelated carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C33FeH48N5O13">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C33FeH48N5O13</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_fcmcbtt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM11903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15952"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_fdp_c" sboTerm="SBO:0000247" id="M_fdp_c" name="D-Fructose 1,6-bisphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H10O12P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -22953,6 +25390,23 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_fe3pyovd_kt_e" sboTerm="SBO:0000247" id="M_fe3pyovd_kt_e" name="Ferrypyoverdine  P putida KT2440 specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27FeH48N10O15">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27FeH48N10O15</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_fe3pyovd_kt_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_feenter_c" sboTerm="SBO:0000247" id="M_feenter_c" name="Fe-enterobactin" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C30FeH26N3O15">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24114,6 +26568,88 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_g1p_e" sboTerm="SBO:0000247" id="M_g1p_e" name="D-Glucose 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g1p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42623"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01586"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXXFSFRBOHSIMQ-GASJEMHNSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-glucose-1-phosphates"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLC-1-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd28817"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_g1p_p" sboTerm="SBO:0000247" id="M_g1p_p" name="D-Glucose 1-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_g1p_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29548"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42623"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57629"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01586"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXXFSFRBOHSIMQ-GASJEMHNSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:D-glucose-1-phosphates"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLC-1-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd28817"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_g3p_c" sboTerm="SBO:0000247" id="M_g3p_c" name="Glyceraldehyde 3-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C3H5O6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -24699,6 +27235,148 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_gal1p_e" sboTerm="SBO:0000247" id="M_gal1p_e" name="Alpha-D-Galactose 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_gal1p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00446"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62705"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXXFSFRBOHSIMQ-FPRJBGLDSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTOSE-1P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19025"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_gal1p_p" sboTerm="SBO:0000247" id="M_gal1p_p" name="Alpha-D-Galactose 1-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H11O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_gal1p_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00446"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4140"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59011"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62705"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HXXFSFRBOHSIMQ-FPRJBGLDSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTOSE-1P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19025"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_gal_bD_c" sboTerm="SBO:0000247" id="M_gal_bD_c" name="Beta D-Galactose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_gal_bD_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42776"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM112"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WQZGKKKJIJFFOK-FPRJBGLDSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00709"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_gal_bD_e" sboTerm="SBO:0000247" id="M_gal_bD_e" name="Beta D-Galactose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H12O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_gal_bD_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00962"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42776"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GALACTOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM112"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WQZGKKKJIJFFOK-FPRJBGLDSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00709"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_gal_c" sboTerm="SBO:0000247" id="M_gal_c" name="D-Galactose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -25541,6 +28219,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_gdpmann_c" sboTerm="SBO:0000247" id="M_gdpmann_c" name="GDP-D-mannose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O16P2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C16H23N5O16P2</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_gdpmann_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13328"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:84880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:84881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.glycan/G10614"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GDP-MANNOSE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM82"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MVMSCBBUIHUTGJ-GDJBGNAASA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00083"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_gdptp_c" sboTerm="SBO:0000247" id="M_gdptp_c" name="Guanosine 3&apos;-diphosphate 5&apos;-triphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C10H11N5O20P5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -26103,6 +28817,78 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_glcur1p_e" sboTerm="SBO:0000247" id="M_glcur1p_e" name="D-Glucuronate 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O10P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -3.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_glcur1p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AIQDYKMWENWVQJ-QIUUJYRFSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03191"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_glcur1p_p" sboTerm="SBO:0000247" id="M_glcur1p_p" name="D-Glucuronate 1-phosphate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O10P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O10P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -3.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_glcur1p_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AIQDYKMWENWVQJ-QIUUJYRFSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35145"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4179"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:681"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-510"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03191"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_glcur_c" sboTerm="SBO:0000247" id="M_glcur_c" name="D-Glucuronate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -27229,6 +30015,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_glyald_p" sboTerm="SBO:0000247" id="M_glyald_p" name="D-Glyceraldehyde" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_glyald_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-30393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:39973"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLYCERALD"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MNQZXJOMYWMBOU-VKHMYHEASA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00448"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_glyb_c" sboTerm="SBO:0000247" id="M_glyb_c" name="Glycine betaine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29470,6 +32286,77 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hchol_c" sboTerm="SBO:0000247" id="M_hchol_c" name="26-Hydroxycholest-4-en-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H42O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H42O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 4.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hchol_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hcholc3coa_c" sboTerm="SBO:0000247" id="M_hcholc3coa_c" name="CoA-20-hydroxy-cholest-4-en-3-one C5 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C43H64N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C43H64N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hcholc3coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hcholc5coa_c" sboTerm="SBO:0000247" id="M_hcholc5coa_c" name="CoA-22-hydroxy-cholest-4-en-3-one C5 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C45H68N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C45H68N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hcholc5coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hcholc8coa_c" sboTerm="SBO:0000247" id="M_hcholc8coa_c" name="CoA-24-hydroxy-cholest-4-en-3-one C8 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C48H74N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C48H74N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hcholc8coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_hco3_c" sboTerm="SBO:0000247" id="M_hco3_c" name="Bicarbonate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29516,6 +32403,98 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hco3_e" sboTerm="SBO:0000247" id="M_hco3_e" name="Bicarbonate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hco3_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-111627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-425425"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVKZGUZCCUSVTD-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hco3_p" sboTerm="SBO:0000247" id="M_hco3_p" name="Bicarbonate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="CHO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CHO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hco3_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-111627"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29896"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-425425"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVKZGUZCCUSVTD-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13351"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28976"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:3401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:40961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB31453"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2CO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HCO3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM60"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00242"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hcys__L_c" sboTerm="SBO:0000247" id="M_hcys__L_c" name="L-Homocysteine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO2S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -29983,6 +32962,99 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hg2_c" sboTerm="SBO:0000247" id="M_hg2_c" name="Mercury  charged 2  Hg" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hg2_e" sboTerm="SBO:0000247" id="M_hg2_e" name="Mercury  charged 2  Hg" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_hg2_p" sboTerm="SBO:0000247" id="M_hg2_p" name="Mercury  charged 2  Hg" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Hg">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Hg</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hg2_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BQPIGGFYSBELGY-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00703"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25199"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25200"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:5714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HG+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00531"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hgentis_c" sboTerm="SBO:0000247" id="M_hgentis_c" name="Homogentisate C8H7O4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -30016,6 +33088,145 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hhd_c" sboTerm="SBO:0000247" id="M_hhd_c" name="(2Z,4Z)-2-Hydroxyhexa-2,4-dienoic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C6H8O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hhd_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hia_c" sboTerm="SBO:0000247" id="M_hia_c" name="3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C11H19O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H19O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hia_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hia_e" sboTerm="SBO:0000247" id="M_hia_e" name="3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C11H19O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H19O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hia_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hip_c" sboTerm="SBO:0000247" id="M_hip_c" name="3-[(3aS,4S,7aS)-7a-Methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C13H16O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C13H16O4</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hip_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hipcoa_c" sboTerm="SBO:0000247" id="M_hipcoa_c" name="3-[(3aS,4S,7aS)-7a-Methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA;" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H50N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H50N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 1.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hipcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hipecoa_c" sboTerm="SBO:0000247" id="M_hipecoa_c" name="(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H51N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H51N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hipecoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hipocoa_c" sboTerm="SBO:0000247" id="M_hipocoa_c" name="3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H51N7O20P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H51N7O20P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hipocoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_hipohcoa_c" sboTerm="SBO:0000247" id="M_hipohcoa_c" name="3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C34H53N7O20P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C34H53N7O20P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_hipohcoa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_his__L_c" sboTerm="SBO:0000247" id="M_his__L_c" name="L-Histidine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -30479,6 +33690,29 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_hmpscoa_c" sboTerm="SBO:0000247" id="M_hmpscoa_c" name="(Hydroxymethylphenyl)succinyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C32H41N7O20P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C32H41N7O20P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -1.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_hmpscoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C09819"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DVSQFPLMOLPRDU-BFUQQYMQSA-I"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM91788"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd06711"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_hom__L_c" sboTerm="SBO:0000247" id="M_hom__L_c" name="L-Homoserine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33398,6 +36632,70 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_lys__D_e" sboTerm="SBO:0000247" id="M_lys__D_e" name="D-Lysine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C6H15N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H15N2O2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_lys__D_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00739"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16855"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42062"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KDXKERNSBIXSRK-RXMQYKEDSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM975"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00549"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_lys__D_p" sboTerm="SBO:0000247" id="M_lys__D_p" name="D-Lysine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C6H15N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H15N2O2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_lys__D_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00739"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16855"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21046"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42062"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KDXKERNSBIXSRK-RXMQYKEDSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM975"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00549"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_lys__L_c" sboTerm="SBO:0000247" id="M_lys__L_c" name="L-Lysine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C6H15N2O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33876,6 +37174,71 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_male_c" sboTerm="SBO:0000247" id="M_male_c" name="Maleate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C4H2O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H2O4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_male_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:132951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25119"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30780"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6653"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1239"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VZCYOOQTPOCHFL-UPHRSURJSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00996"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_malm_c" sboTerm="SBO:0000247" id="M_malm_c" name="Maleamate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C4H4NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C4H4NO3</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_malm_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14557"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14558"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16146"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25117"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6652"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FSQQTNAZHBEJLS-UPHRSURJSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEAMATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01123"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_malt1p_c" sboTerm="SBO:0000247" id="M_malt1p_c" name="Alpha-maltose 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C12H21O14P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34559,6 +37922,34 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_man6pglyc_c" sboTerm="SBO:0000247" id="M_man6pglyc_c" name="2(alpha-D-Mannosyl-6-phosphate)-D-glycerate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C9H14O12P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H14O12P</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -3.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_man6pglyc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BOLXAGHGKNGVBE-MTXRGOKVSA-K"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C16699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-1063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15496"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16506"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_man_e" sboTerm="SBO:0000247" id="M_man_e" name="D-Mannose" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34631,6 +38022,86 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_manglyc_e" sboTerm="SBO:0000247" id="M_manglyc_e" name="2(alpha-D-Mannosyl)-D-glycerate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H15O9">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H15O9</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_manglyc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11403"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:851"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DDXCFDOPXBPUJC-SAYMMRJXSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-O-ALPHA-MANNOSYL-D-GLYCERATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08374"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_manglyc_p" sboTerm="SBO:0000247" id="M_manglyc_p" name="2(alpha-D-Mannosyl)-D-glycerate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H15O9">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H15O9</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_manglyc_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11403"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:851"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DDXCFDOPXBPUJC-SAYMMRJXSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2-O-ALPHA-MANNOSYL-D-GLYCERATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd08374"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_mdhdhf_c" sboTerm="SBO:0000247" id="M_mdhdhf_c" name="(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H8O4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8O4</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mdhdhf_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CCVJVKWZZMMBHB-WVZVXSGGSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:71316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-10773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM9407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd22811"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_melib_c" sboTerm="SBO:0000247" id="M_melib_c" name="Melibiose C12H22O11" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34739,6 +38210,78 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_meoh_e" sboTerm="SBO:0000247" id="M_meoh_e" name="Methanol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH4O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CH4O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_meoh_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5359061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:52090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALCOHOL-GROUP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:METOH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM157"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OKKJLVBELUTLKV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00116"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_meoh_p" sboTerm="SBO:0000247" id="M_meoh_p" name="Methanol" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CH4O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CH4O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_meoh_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5359061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00132"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:52090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALCOHOL-GROUP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:METOH"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM157"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OKKJLVBELUTLKV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00116"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mercppyr_c" sboTerm="SBO:0000247" id="M_mercppyr_c" name="Mercaptopyruvate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C3H3O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35086,98 +38629,56 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_R__L_c" sboTerm="SBO:0000247" id="M_metsox_R__L_c" name="L-methionine-R-sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_R__L_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15998"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_metsox_R__L_e" sboTerm="SBO:0000247" id="M_metsox_R__L_e" name="L-methionine-R-sulfoxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox__R_c" sboTerm="SBO:0000247" id="M_metox__R_c" name="L methionine R oxide C5H11NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_R__L_e">
+            <rdf:Description rdf:about="#M_metox__R_c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15998"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11576"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_R__L_p" sboTerm="SBO:0000247" id="M_metsox_R__L_p" name="L-methionine-R-sulfoxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox__R_e" sboTerm="SBO:0000247" id="M_metox__R_e" name="L methionine R oxide C5H11NO3S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_R__L_p">
+            <rdf:Description rdf:about="#M_metox__R_e">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15998"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM8825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd11576"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_S__L_c" sboTerm="SBO:0000247" id="M_metsox_S__L_c" name="L-Methionine Sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox_c" sboTerm="SBO:0000247" id="M_metox_c" name="L Methionine S oxide C5H11NO3S" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_S__L_c">
+            <rdf:Description rdf:about="#M_metox_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
@@ -35198,17 +38699,16 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_S__L_e" sboTerm="SBO:0000247" id="M_metsox_S__L_e" name="L-Methionine Sulfoxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metox_e" sboTerm="SBO:0000247" id="M_metox_e" name="L Methionine S oxide C5H11NO3S" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_S__L_e">
+            <rdf:Description rdf:about="#M_metox_e">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
@@ -35229,7 +38729,7 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_metsox_S__L_p" sboTerm="SBO:0000247" id="M_metsox_S__L_p" name="L-Methionine Sulfoxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+      <species metaid="M_metsox_R__L_c" sboTerm="SBO:0000247" id="M_metsox_R__L_c" name="L-methionine-R-sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: C5H11NO3S</p>
@@ -35239,7 +38739,34 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_metsox_S__L_p">
+            <rdf:Description rdf:about="#M_metsox_R__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C15998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2245"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QEFRNWWLZKMPFJ-ZXPFJRLXSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd14720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15497"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_metsox_S__L_c" sboTerm="SBO:0000247" id="M_metsox_S__L_c" name="L-Methionine Sulfoxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H11NO3S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_metsox_S__L_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5676943"/>
@@ -35700,6 +39227,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mn2_p" sboTerm="SBO:0000247" id="M_mn2_p" name="Manganese" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Mn">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: Mn</p>
+            <p>CHARGE: 2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mn2_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1981162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29418"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C19610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MN+2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2255"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/WAEMQWOKJMHJLA-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd20863"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mnl1p_c" sboTerm="SBO:0000247" id="M_mnl1p_c" name="D-Mannitol 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35731,6 +39290,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mnl1p_e" sboTerm="SBO:0000247" id="M_mnl1p_e" name="D-Mannitol 1-phosphate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H13O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mnl1p_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:4205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61381"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GACTWZZMVMUKNG-KVTDHHQDSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MANNITOL-1P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM90126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd27436"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mnl_e" sboTerm="SBO:0000247" id="M_mnl_e" name="D-Mannitol" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35896,6 +39486,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mql6_c" sboTerm="SBO:0000247" id="M_mql6_c" name="Menaquinol 6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C41H58O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C41H58O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mql6_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:84536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM7517"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZVENTDGZQVBWNA-RCIYGOBDSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15994"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mql7_c" sboTerm="SBO:0000247" id="M_mql7_c" name="Menaquinol 7 C46H66O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C46H66O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35944,6 +39558,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mqn6_c" sboTerm="SBO:0000247" id="M_mqn6_c" name="Menaquinone 6" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C41H56O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C41H56O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mqn6_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB30017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMPR02030001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-9724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM12235"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PFRQBZFETXBLTP-RCIYGOBDSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd15995"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mqn7_c" sboTerm="SBO:0000247" id="M_mqn7_c" name="Menaquinone 7 C46H64O2" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C46H64O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36161,6 +39799,30 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_mththf_e" sboTerm="SBO:0000247" id="M_mththf_e" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H10O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_mththf_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BVIYGXUQVXBHQS-IUYQGCFVSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C21382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44800"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-10774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM30887"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_mththf_p" sboTerm="SBO:0000247" id="M_mththf_p" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36539,6 +40201,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_n2o_c" sboTerm="SBO:0000247" id="M_n2o_c" name="Nitrous oxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="N2O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: N2O</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: -2.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_n2o_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14661"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17045"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25568"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44250"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00102"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/GQPLMRYTRLFLPF-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB35807"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITROUS-OXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00659"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_n2o_e" sboTerm="SBO:0000247" id="M_n2o_e" name="Nitrous oxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="N2O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -36618,6 +40311,37 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_n6all26d_c" sboTerm="SBO:0000247" id="M_n6all26d_c" name="N6-Acetyl-LL-2,6-diaminoheptanedioate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C9H15N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H15N2O5</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_n6all26d_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04390"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12578"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21876"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7410"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/KYVLWJXMCBZDRL-BQBZGAKWSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-1771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02685"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_na1_c" sboTerm="SBO:0000247" id="M_na1_c" name="Sodium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="Na">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37083,6 +40807,36 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_nal2a6o_c" sboTerm="SBO:0000247" id="M_nal2a6o_c" name="N-Acetyl-L-2-amino-6-oxopimelate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H11NO6</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_nal2a6o_c">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:N-ACETYL-L-2-AMINO-6-OXO-PIMELATE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1872"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RVHKMLVNOXVQRH-LURJTMIESA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03289"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ncam_c" sboTerm="SBO:0000247" id="M_ncam_c" name="Nicotinamide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H6N2O">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -37116,73 +40870,43 @@
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-      <species metaid="M_nh3_c" sboTerm="SBO:0000247" id="M_nh3_c" name="Ammonia" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H3N">
+      <species metaid="M_nfmalm_c" sboTerm="SBO:0000247" id="M_nfmalm_c" name="N-Formyl maleamic acid" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H4NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: H3N</p>
+            <p>FORMULA: C5H4NO4</p>
+            <p>CHARGE: -1</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_nh3_c">
+            <rdf:Description rdf:about="#M_nfmalm_c">
               <bqbiol:is>
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-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIA"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIUM"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM15"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QGZKDVFQNNGYKY-UHFFFAOYSA-O"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C18232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59911"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59930"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HSKSAKBZUITULZ-UPHRSURJSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA08020194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-12278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd16741"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
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       </species>
-      <species metaid="M_nh4_c" sboTerm="SBO:0000247" id="M_nh4_c" name="Ammonium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
+      <species metaid="M_nh3_c" sboTerm="SBO:0000247" id="M_nh3_c" name="Ammonia" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="H3N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: H4N</p>
-            <p>CHARGE: 1</p>
+            <p>FORMULA: H3N</p>
             <p>SBOTerm: SBO:0000247</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#M_nh4_c">
+            <rdf:Description rdf:about="#M_nh3_c">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1132163"/>
@@ -37229,7 +40953,7 @@
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         </annotation>
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-      <species metaid="M_nh4_e" sboTerm="SBO:0000247" id="M_nh4_e" name="Ammonium" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
+      <species metaid="M_nh4_c" sboTerm="SBO:0000247" id="M_nh4_c" name="Ammonium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>FORMULA: H4N</p>
@@ -37239,7 +40963,64 @@
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-            <rdf:Description rdf:about="#M_nh4_e">
+            <rdf:Description rdf:about="#M_nh4_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1132163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-113561"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-140912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2022135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-29382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-31633"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-389843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5693978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-76230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13405"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13406"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13407"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:135980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16134"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44284"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7435"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB41827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIA"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIUM"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM15"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QGZKDVFQNNGYKY-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19013"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_nh4_e" sboTerm="SBO:0000247" id="M_nh4_e" name="Ammonium" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="H4N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: H4N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nh4_e">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1132163"/>
@@ -37457,6 +41238,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nicrns_c" sboTerm="SBO:0000247" id="M_nicrns_c" name="Nicotinate D-ribonucleoside" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C11H13NO6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C11H13NO6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nicrns_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB06809"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-8259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1915"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PUEDDPCUCPRQNY-ZYUZMQFOSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03471"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_nicrnt_c" sboTerm="SBO:0000247" id="M_nicrnt_c" name="Nicotinate D-ribonucleotide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C11H12NO9P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -38585,6 +42397,59 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ochol_c" sboTerm="SBO:0000247" id="M_ochol_c" name="26-Oxocholest-4-en-3-one" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H40O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C27H40O2</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 4.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ochol_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_ocholc5coa_c" sboTerm="SBO:0000247" id="M_ocholc5coa_c" name="CoA-22-one-cholest-4-en-3-one C5 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C45H66N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C45H66N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ocholc5coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_ocholc8coa_c" sboTerm="SBO:0000247" id="M_ocholc8coa_c" name="CoA-24-one-cholest-4-en-3-one C8 side chain" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C48H72N7O19P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C48H72N7O19P3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 2.0</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_ocholc8coa_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_octa_c" sboTerm="SBO:0000247" id="M_octa_c" name="Octanoate (n-C8:0)" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C8H15O2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40599,6 +44464,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_peamn_c" sboTerm="SBO:0000247" id="M_peamn_c" name="Phenethylamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12N">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H12N</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_peamn_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-500605"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/BHHGXPLMPWCGHP-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:225237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25965"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:50048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60276"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PHENYLETHYLAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03161"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_peamn_e" sboTerm="SBO:0000247" id="M_peamn_e" name="Phenethylamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H12N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -42410,6 +46309,68 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ppal_e" sboTerm="SBO:0000247" id="M_ppal_e" name="Propanal" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ppal_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM821"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NBBJYMSMWIIQGU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00371"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ppal_p" sboTerm="SBO:0000247" id="M_ppal_p" name="Propanal" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C3H6O">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C3H6O</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ppal_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14898"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:41359"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45052"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03366"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-665"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM821"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NBBJYMSMWIIQGU-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00371"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ppap_c" sboTerm="SBO:0000247" id="M_ppap_c" name="Propanoyl phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C3H5O5P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43739,6 +47700,25 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ptd1ino160_c" sboTerm="SBO:0000247" id="M_ptd1ino160_c" name="Phosphatidyl 1D myo inositol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C41H78O13P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C41H78O13P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ptd1ino160_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM12646"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ptrc_c" sboTerm="SBO:0000247" id="M_ptrc_c" name="Putrescine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C4H14N2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -43962,6 +47942,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pydam_c" sboTerm="SBO:0000247" id="M_pydam_c" name="Pyridoxamine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C8H13N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H13N2O2</p>
+            <p>CHARGE: 1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pydam_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-964945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:131533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26426"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45228"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8669"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYRIDOXAMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM548"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NHZMQXZHNVQTQA-UHFFFAOYSA-O"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00419"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pydx5p_c" sboTerm="SBO:0000247" id="M_pydx5p_c" name="Pyridoxal 5&apos;-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C8H8NO6P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44060,6 +48074,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_pydxn_e" sboTerm="SBO:0000247" id="M_pydxn_e" name="Pyridoxine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C8H11NO3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C8H11NO3</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_pydxn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-965053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26429"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8671"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D08454"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00239"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02075"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LXNHXLLTXMVWPM-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYRIDOXINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM419"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00263"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_pyovd_kt_e" sboTerm="SBO:0000247" id="M_pyovd_kt_e" name="Pyoverdine  P putida specific" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H48N10O15">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44290,36 +48336,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_quin_e" sboTerm="SBO:0000247" id="M_quin_e" name="Quinate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H11O6">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C7H11O6</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_quin_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/AAWZDTNXLSGCEK-WYWMIBKRSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00296"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17521"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26489"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26492"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29751"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:8715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:QUINATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00248"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_quin_p" sboTerm="SBO:0000247" id="M_quin_p" name="Quinate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C7H11O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44858,6 +48874,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ru5p__L_c" sboTerm="SBO:0000247" id="M_ru5p__L_c" name="L-Ribulose 5-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ru5p__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13164"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6296"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FNZLKVNUWIIPSJ-CRCLSJGQSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-RIBULOSE-5-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_s17bp_c" sboTerm="SBO:0000247" id="M_s17bp_c" name="Sedoheptulose 1,7-bisphosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H12O13P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -44946,6 +48991,97 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_s_e" sboTerm="SBO:0000247" id="M_s_e" name="Sulfur" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_s_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Elemental-Sulfur"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NINIDFKCEFEMDL-UHFFFAOYSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salc_c" sboTerm="SBO:0000247" id="M_salc_c" name="Salicylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salc_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM378"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YGSDEFSMJLZEOE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00599"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_salc_e" sboTerm="SBO:0000247" id="M_salc_e" name="Salicylate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C7H5O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C7H5O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_salc_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-159559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26597"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:30762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9006"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01895"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-110"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM378"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/YGSDEFSMJLZEOE-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00599"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs4_c" sboTerm="SBO:0000247" id="M_salchs4_c" name="Salmochelin-S4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H46N3O25">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -45972,6 +50108,38 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_slnt_p" sboTerm="SBO:0000247" id="M_slnt_p" name="Selenite" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O3Se">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O3Se</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_slnt_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-5357720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C05684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:29924"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB11119"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MCAHWIHFGHIESP-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SELENITE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1157"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd03387"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_so3_c" sboTerm="SBO:0000247" id="M_so3_c" name="Sulfite" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47567,6 +51735,62 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_tet_e" sboTerm="SBO:0000247" id="M_tet_e" name="Tetrathionate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O6S4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O6S4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tet_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9504"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HPQYKCJIWQFJMS-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-14"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01414"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_tet_p" sboTerm="SBO:0000247" id="M_tet_p" name="Tetrathionate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="O6S4">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: O6S4</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_tet_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33113"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9504"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/HPQYKCJIWQFJMS-UHFFFAOYSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-14"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01414"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_thdp_c" sboTerm="SBO:0000247" id="M_thdp_c" name="2,3,4,5-Tetrahydrodipicolinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C7H7NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47799,6 +52023,43 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_thp2c_c" sboTerm="SBO:0000247" id="M_thp2c_c" name="2,3,4,5-Tetrahydropyridine-2-carboxylate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H8NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H8NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_thp2c_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-6783877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11409"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19295"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:58769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61447"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:865"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CSDPVAKVEWETFG-YFKPBYRVSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB12130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB59657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB62589"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-7682"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00352"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_thr__L_c" sboTerm="SBO:0000247" id="M_thr__L_c" name="L-Threonine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48017,6 +52278,37 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_thym_p" sboTerm="SBO:0000247" id="M_thym_p" name="Thymine C5H6N2O2" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H6N2O2</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_thym_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83960"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THYMINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM386"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/RWQNBRDOKXIBIV-UHFFFAOYSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00151"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_thymd_c" sboTerm="SBO:0000247" id="M_thymd_c" name="Thymidine C10H14N2O5" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H14N2O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -48052,6 +52344,76 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_thymd_e" sboTerm="SBO:0000247" id="M_thymd_e" name="Thymidine C10H14N2O5" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H14N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H14N2O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_thymd_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00273"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IQFYYKKMVGJFEH-XLPZGREQSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THYMIDINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00184"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_thymd_p" sboTerm="SBO:0000247" id="M_thymd_p" name="Thymidine C10H14N2O5" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H14N2O5">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H14N2O5</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_thymd_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-83928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:19273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45782"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:45918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:53527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00273"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IQFYYKKMVGJFEH-XLPZGREQSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THYMIDINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM420"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00184"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_tma_e" sboTerm="SBO:0000247" id="M_tma_e" name="Trimethylamine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="1" fbc:chemicalFormula="C3H10N">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49974,6 +54336,80 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ump_e" sboTerm="SBO:0000247" id="M_ump_e" name="UMP C9H11N2O9P" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H11N2O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ump_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-735698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00105"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9849"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DJJCXFVJDGTHFX-XVFCMESISA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UMP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM80"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00091"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_ump_p" sboTerm="SBO:0000247" id="M_ump_p" name="UMP C9H11N2O9P" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C9H11N2O9P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ump_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-109402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-735698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00105"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13508"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13509"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:46385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:47721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9849"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/DJJCXFVJDGTHFX-XVFCMESISA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00288"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UMP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM80"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00091"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_uppg3_c" sboTerm="SBO:0000247" id="M_uppg3_c" name="Uroporphyrinogen III" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-8" fbc:chemicalFormula="C40H36N4O16">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -50630,6 +55066,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_vaccoa_c" sboTerm="SBO:0000247" id="M_vaccoa_c" name="Vinylacetyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O17P3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C25H36N7O17P3S</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_vaccoa_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:9991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM2159"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UATIGEHITDTAGF-CITAKDKDSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01557"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_val__D_c" sboTerm="SBO:0000247" id="M_val__D_c" name="D Valine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H9NO2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51014,6 +55480,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xtp_c" sboTerm="SBO:0000247" id="M_xtp_c" name="XTP" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O15P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O15P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00700"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CAEFEWVYEZABLA-UUOKFMHZSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XTP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00530"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xtsn_c" sboTerm="SBO:0000247" id="M_xtsn_c" name="Xanthosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51043,6 +55538,64 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xtsn_e" sboTerm="SBO:0000247" id="M_xtsn_e" name="Xanthosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H12N4O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtsn_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XANTHOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM687"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UBORTCNDUKBEOP-UUOKFMHZSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01217"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_xtsn_p" sboTerm="SBO:0000247" id="M_xtsn_p" name="Xanthosine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H12N4O6</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtsn_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01762"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15323"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:18107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XANTHOSINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM687"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/UBORTCNDUKBEOP-UUOKFMHZSA-N"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01217"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xu5p__D_c" sboTerm="SBO:0000247" id="M_xu5p__D_c" name="D-Xylulose 5-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51076,6 +55629,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xu5p__L_c" sboTerm="SBO:0000247" id="M_xu5p__L_c" name="L-Xylulose 5-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H9O8P</p>
+            <p>CHARGE: -2</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xu5p__L_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C03291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13191"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:21427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:6328"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/FNZLKVNUWIIPSJ-WHFBIAKZSA-L"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-XYLULOSE-5-P"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd02100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xyl__D_c" sboTerm="SBO:0000247" id="M_xyl__D_c" name="D-Xylose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51584,6 +56166,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_1P2CBXLR" sboTerm="SBO:0000176" id="R_1P2CBXLR" name="Delta1 piperideine 2 carboxylate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -51610,6 +56195,57 @@
           <speciesReference species="M_pro__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_1PPDCRc" sboTerm="SBO:0000176" id="R_1PPDCRc" name="L PipecolateNADP 2 oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_1PPDCRc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12527"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-5693347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02203"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01579"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_1pipdn2c_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_Lpipecol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_1PY4h3cAH" sboTerm="SBO:0000176" id="R_1PY4h3cAH" name="1 Pyrroline 4 hydroxy 2 carboxylate aminohydrolase  decyclizing " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -52984,6 +57620,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004470_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2DHGLCNkt_tpp" sboTerm="SBO:0000185" id="R_2DHGLCNkt_tpp" name="2 ketogluconate transporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2DHGLCNkt_tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94790"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12783"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dhglcn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dhglcn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_2HH24DDH" sboTerm="SBO:0000176" id="R_2HH24DDH" name="2hh24dd hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53108,6 +57771,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002631_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_2PGLYCt6" sboTerm="SBO:0000185" id="R_2PGLYCt6" name="2 Phosphoglycolate transport inout via proton symport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_2PGLYCt6">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05473"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_34DHCINMtex" sboTerm="SBO:0000185" id="R_34DHCINMtex" name="DHCINM transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53215,6 +57905,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_3AIBT2" sboTerm="SBO:0000176" id="R_3AIBT2" name="L 3 aminoisobutyrate transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_3AIBT2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mmtsa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3aib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011004345_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_3AMPtex" sboTerm="SBO:0000185" id="R_3AMPtex" name="3AMP transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53555,6 +58272,28 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004000_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_3HSA" sboTerm="SBO:0000176" id="R_3HSA" name="MNXR19078" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_3HSA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_9ohadd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3hsa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_3MBt2pp" sboTerm="SBO:0000185" id="R_3MBt2pp" name="H+/Isovalerate symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54329,6 +59068,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001533_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4HBALDtex" sboTerm="SBO:0000185" id="R_4HBALDtex" name="4-hydroxybenzaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_4HBALDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95006"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hbald_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_4HBAt" sboTerm="SBO:0000185" id="R_4HBAt" name="MNXR68734" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54609,6 +59375,133 @@
           <speciesReference species="M_4hpro_LT_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_4HPTNCOAK" sboTerm="SBO:0000176" id="R_4HPTNCOAK" name="4 Hydroxypentanoyl CoA kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4HPTNCOAK">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4poptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4OXPTCOADHx" sboTerm="SBO:0000176" id="R_4OXPTCOADHx" name="4 Oxopentanoyl CoA 4 dehydrogenase (NAD)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTCOADHx">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_016721757_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4OXPTCOADHy" sboTerm="SBO:0000176" id="R_4OXPTCOADHy" name="4 Oxopentanoyl CoA 4 dehydrogenase (NADP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTCOADHy">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_016721757_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_4OXPTNtex" sboTerm="SBO:0000185" id="R_4OXPTNtex" name="4 Oxopentanoate transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTNtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4OXPTNtpp" sboTerm="SBO:0000185" id="R_4OXPTNtpp" name="4 Oxopentanoate transport via Na symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4OXPTNtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4oxptn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_4PCP" sboTerm="SBO:0000176" id="R_4PCP" name="Tetrapeptide L,D-carboxypeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54714,6 +59607,74 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_4POPCOAM" sboTerm="SBO:0000176" id="R_4POPCOAM" name="4 (Phosphooxy pentanoyl CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4POPCOAM">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4poptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4POPCOAM2" sboTerm="SBO:0000176" id="R_4POPCOAM2" name="4 (Phosphooxy pentanoyl CoA mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4POPCOAM2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3ptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_4POPCOAM3" sboTerm="SBO:0000176" id="R_4POPCOAM3" name="4 (Phosphooxy pentanoyl CoA mutase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_4POPCOAM3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3hptcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_5DGLCNR" sboTerm="SBO:0000176" id="R_5DGLCNR" name="5-dehydro-D-gluconate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54897,6 +59858,96 @@
           <speciesReference species="M_6atha_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_6HNACMO" sboTerm="SBO:0000176" id="R_6HNACMO" name="6 hydroxynicotinic acid monooxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_6HNACMO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.13.114"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27333"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-7573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12746"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000504_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_6HNACt1pp" sboTerm="SBO:0000185" id="R_6HNACt1pp" name="6 Hydroxy Nicotinic acid transport via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_6HNACt1pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002275_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_6HNACtex" sboTerm="SBO:0000185" id="R_6HNACtex" name="Nicotinic acid transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_6HNACtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_6hnac_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_A5PISO" sboTerm="SBO:0000176" id="R_A5PISO" name="Arabinose-5-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -54957,6 +60008,33 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_AAAN" sboTerm="SBO:0000176" id="R_AAAN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AAAN">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AACPS1" sboTerm="SBO:0000176" id="R_AACPS1" name="Acyl-[acyl-carrier-protein] synthetase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -55090,6 +60168,71 @@
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_AADSACYCL" sboTerm="SBO:0000176" id="R_AADSACYCL" name="AAPSAS" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AADSACYCL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.31"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25121"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-8173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR107438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01664"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thp2c_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_L2aadp6sa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_AALDCDLsi" sboTerm="SBO:0000176" id="R_AALDCDLsi" name="Aminoacetaldehyde CO2 ligase  spontaneous reaction " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AALDCDLsi">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_2amsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AAMYL" sboTerm="SBO:0000176" id="R_AAMYL" name="Alpha-amylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56078,6 +61221,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004191_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACALDt" sboTerm="SBO:0000185" id="R_ACALDt" name="Acetaldehyde reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACALDtex" sboTerm="SBO:0000185" id="R_ACALDtex" name="Acetaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56110,6 +61285,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACALDtpp" sboTerm="SBO:0000185" id="R_ACALDtpp" name="Acetaldehyde reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACCOAC" sboTerm="SBO:0000176" id="R_ACCOAC" name="Acetyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56256,6 +61463,62 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001465_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACGAL1Ptex" sboTerm="SBO:0000185" id="R_ACGAL1Ptex" name="N-acetyl-D-galactosamine 1-phosphate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACGAL1Ptex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95234"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08036"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acgal1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgal1p_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ACGAM1Ptex" sboTerm="SBO:0000185" id="R_ACGAM1Ptex" name="N-acetyl-D-glucosamine 1-phosphate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACGAM1Ptex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08039"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acgam1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgam1p_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACGAMK" sboTerm="SBO:0000176" id="R_ACGAMK" name="N-acetylglucosamine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -56804,33 +62067,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACMANAt2" sboTerm="SBO:0000185" id="R_ACMANAt2" name="N acetyl D mannosamine proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACMANAt2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95276"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05486"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_acmana_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_acmana_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ACMANAtex" sboTerm="SBO:0000185" id="R_ACMANAtex" name="N-acetyl-D-mannosamine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -59504,6 +64740,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_028852429_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACSPHAC160" sboTerm="SBO:0000176" id="R_ACSPHAC160" name="R 3 Hydroxyacid Acyl CoA Synthetase  C160 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ACSPHAC160">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hhdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_028852429_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACSPHAC40" sboTerm="SBO:0000176" id="R_ACSPHAC40" name="R 3 Hydroxyacid Acyl CoA Synthetase  C40 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60409,6 +65674,43 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ADAPAT" sboTerm="SBO:0000176" id="R_ADAPAT" name="E N-acetyl-L,L-diaminopimelate aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ADAPAT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25315"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25317"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-4822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03086"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nal2a6o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n6all26d_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002354_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ADCL" sboTerm="SBO:0000176" id="R_ADCL" name="4-aminobenzoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -61119,7 +66421,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002463_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ADNt2pp" sboTerm="SBO:0000185" id="R_ADNt2pp" name="Adenosine transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ADNtex" sboTerm="SBO:0000185" id="R_ADNtex" name="Adenosine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -61127,30 +66429,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ADNt2pp">
+            <rdf:Description rdf:about="#R_ADNtex">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29989"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/29990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108A"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-203"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95461"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05318"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11000"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_adn_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adn_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ADOCBIAH" sboTerm="SBO:0000176" id="R_ADOCBIAH" name="MNXR85327" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -62198,6 +67492,90 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000109_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AGt3" sboTerm="SBO:0000185" id="R_AGt3" name="Silver transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AGt3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95620"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08091"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ag_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011004221_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011004403_1"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011004219_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011004220_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011004221_1"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_AGtex" sboTerm="SBO:0000185" id="R_AGtex" name="Copper  Ag  transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AGtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_ag_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ag_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_AGtpp" sboTerm="SBO:0000185" id="R_AGtpp" name="Copper transport in via permease  no H " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_AGtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_ag_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ag_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_AHCYSNS" sboTerm="SBO:0000176" id="R_AHCYSNS" name="S-adenosylhomocysteine nucleosidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -62362,7 +67740,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AI2abcpp" sboTerm="SBO:0000185" id="R_AI2abcpp" name="Autoinducer-2 ABC transporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_AI2tex" sboTerm="SBO:0000185" id="R_AI2tex" name="Ai2 transport, outer membrane" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -62370,7 +67748,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_AI2abcpp">
+            <rdf:Description rdf:about="#R_AI2tex">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -62378,15 +67756,10 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mththf_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mththf_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_mththf_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mththf_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_AI2tpp" sboTerm="SBO:0000185" id="R_AI2tpp" name="Quorum signal AI-2 exporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -65924,6 +71297,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_AOXHEXCYCL" sboTerm="SBO:0000176" id="R_AOXHEXCYCL" name="PPD2CSPp spontaneous cyclization reaction" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_AOXHEXCYCL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/31070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-8172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02916"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_1pipdn2c_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_AP4AH" sboTerm="SBO:0000176" id="R_AP4AH" name="Ap4A hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67163,28 +72571,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000856_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ARSR" sboTerm="SBO:0000176" id="R_ARSR" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ARSR">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ARUH" sboTerm="SBO:0000176" id="R_ARUH" name="L Arginine pyruvate transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67262,15 +72648,50 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001923_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ASAD_1" sboTerm="SBO:0000176" id="R_ASAD_1" name="Aspartate-semialdehyde dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ASCBPL" sboTerm="SBO:0000176" id="R_ASCBPL" name="L-ascorbate 6-phosphate lactonase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASCBPL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28803"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07492"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3dhgulnp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ASCBpts" sboTerm="SBO:0000185" id="R_ASCBpts" name="L-ascorbate transport via PEP:Pyr PTS " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ASAD_1">
+            <rdf:Description rdf:about="#R_ASCBpts">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -67278,15 +72699,78 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_4pasp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_aspsa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000311_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000312_1"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ASCBptspp" sboTerm="SBO:0000185" id="R_ASCBptspp" name="L-ascorbate transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASCBptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13758"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ascb6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000312_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_ASCBtex" sboTerm="SBO:0000185" id="R_ASCBtex" name="L-ascorbate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASCBtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138070"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08159"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ascb__L_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ASNN" sboTerm="SBO:0000176" id="R_ASNN" name="L-asparaginase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -67461,28 +72945,30 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ASO3t2pp" sboTerm="SBO:0000185" id="R_ASO3t2pp" name="Arsenite transporter via proton antiport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ASO3t4pp" sboTerm="SBO:0000185" id="R_ASO3t4pp" name="Arsenite transporter via sodium antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ASO3t2pp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ASO3t4pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96071"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
           <speciesReference species="M_aso3_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_aso3_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ASO3tex" sboTerm="SBO:0000185" id="R_ASO3tex" name="Arsenite transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -67726,31 +73212,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ASPDTDe" sboTerm="SBO:0000185" id="R_ASPDTDe" name="D-aspartate transport, extracellular" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ASPDTDe">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12404"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_asp__D_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_asp__D_e" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ASPK" sboTerm="SBO:0000176" id="R_ASPK" name="Aspartate kinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -68523,6 +73984,45 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ATPHs" sboTerm="SBO:0000176" id="R_ATPHs" name="ATP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ATPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATP-DEAMINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00064"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ATPPRT" sboTerm="SBO:0000176" id="R_ATPPRT" name="ATP phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -68956,6 +74456,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003358_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_BCT1_syn" sboTerm="SBO:0000185" id="R_BCT1_syn" name="Bicarbonate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_BCT1_syn">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96227"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000342_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_028852561_1"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_BDH" sboTerm="SBO:0000176" id="R_BDH" name="3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69320,6 +74855,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000233_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_BUP" sboTerm="SBO:0000176" id="R_BUP" name="Beta ureidopropionase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_BUP">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3uib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3aib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_BUPN" sboTerm="SBO:0000176" id="R_BUPN" name="Beta-ureidopropionase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69623,6 +75184,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003543_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_BZt" sboTerm="SBO:0000185" id="R_BZt" name="Benzoate transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_BZt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32813"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12436"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_bz_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_BZt1pp" sboTerm="SBO:0000185" id="R_BZt1pp" name="Benzoate transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69712,7 +75305,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CA2abc1pp" sboTerm="SBO:0000185" id="R_CA2abc1pp" name="Calcium transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CA2abcpp" sboTerm="SBO:0000185" id="R_CA2abcpp" name="Calcium transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -69720,33 +75313,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_CA2abc1pp">
+            <rdf:Description rdf:about="#R_CA2abcpp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18105#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18106#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18107#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/18108#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18105#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18106#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18107#2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18108#2"/>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3"/>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.6.3.8-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96435"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-936883"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05513"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-193"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10447"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -69754,12 +75332,12 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ca2_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ca2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
@@ -70551,6 +76129,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000358_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CDPPT160" sboTerm="SBO:0000176" id="R_CDPPT160" name="CDPPT160" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CDPPT160">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96560"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cdpdhdecg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptd1ino160_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CGLYabcpp" sboTerm="SBO:0000185" id="R_CGLYabcpp" name="L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70640,6 +76245,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CHCD" sboTerm="SBO:0000176" id="R_CHCD" name="MNXR22345" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHCD">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hipohcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hipocoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CHLabc" sboTerm="SBO:0000185" id="R_CHLabc" name="Choline transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70783,6 +76413,85 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CHOD" sboTerm="SBO:0000176" id="R_CHOD" name="MNXR6103" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHOD">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_chsterol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_chol4en3one_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011004454_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CHOL1" sboTerm="SBO:0000176" id="R_CHOL1" name="MNXR19104" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHOL1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_chsterol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_chol4en3one_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000136_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CHOLCOA" sboTerm="SBO:0000176" id="R_CHOLCOA" name="MNXR87732" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHOLCOA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cholc5coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cholenec5coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CHOLD" sboTerm="SBO:0000176" id="R_CHOLD" name="Choline dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70822,6 +76531,75 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003228_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CHOLSH" sboTerm="SBO:0000176" id="R_CHOLSH" name="CHOLINE-SULFATASE-RXN" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CHOLSH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20820"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20822"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/20823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.6.6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHOLINE-SULFATASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00756"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_chols_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_chol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CHOLSabc_1" sboTerm="SBO:0000185" id="R_CHOLSabc_1" name="Choline sulfate transport in via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CHOLSabc_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chols_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000097_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CHORM" sboTerm="SBO:0000176" id="R_CHORM" name="Chorismate mutase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70929,47 +76707,86 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_043876655_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CINNDO" sboTerm="SBO:0000176" id="R_CINNDO" name="Cinnamate dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CHSTEROLt_1" sboTerm="SBO:0000185" id="R_CHSTEROLt_1" name="MNXR1163" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CHSTEROLt_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chsterol_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chsterol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CHTBSptspp" sboTerm="SBO:0000185" id="R_CHTBSptspp" name="Chitobiose transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CINNDO">
+            <rdf:Description rdf:about="#R_CHTBSptspp">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.12.19"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25058"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25060"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04598"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138170"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_cinnm_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chtbs_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_cenchddd_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_chtbs6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:and>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011001038_1"/>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011001040_1"/>
-          </fbc:and>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000312_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CHTBStex" sboTerm="SBO:0000185" id="R_CHTBStex" name="Chitobiose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CHTBStex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138171"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_chtbs_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_chtbs_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CINNMCOAH" sboTerm="SBO:0000176" id="R_CINNMCOAH" name="Cinnamoyl CoA Hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -70995,6 +76812,50 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_CINNMtex" sboTerm="SBO:0000185" id="R_CINNMtex" name="Cinnamic acid transport  diffusion  extra organism " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CINNMtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cinnm_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cinnm_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CINNMtpp" sboTerm="SBO:0000185" id="R_CINNMtpp" name="Cinnamic acid transport  diffusion  periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CINNMtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cinnm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cinnm_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CITDAPPD" sboTerm="SBO:0000176" id="R_CITDAPPD" name="Citryl-L2,3-diamino-propionic acid decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -71087,61 +76948,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_020832245_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CITt14" sboTerm="SBO:0000185" id="R_CITt14" name="Citrate transport in via Ca complex" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CITt14">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05213"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_ca2_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_cit_e" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ca2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_CITt3pp" sboTerm="SBO:0000185" id="R_CITt3pp" name="Citrate transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CITt3pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96747"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_cit_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_cit_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_CITt4pp_1" sboTerm="SBO:0000185" id="R_CITt4pp_1" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -71957,6 +77763,115 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CMCBTFabcpp" sboTerm="SBO:0000185" id="R_CMCBTFabcpp" name="Carboxymycobactin transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fcmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fcmcbtt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002321_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CMCBTFtex" sboTerm="SBO:0000185" id="R_CMCBTFtex" name="Carboxymycobactin secretion  to extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CMCBTFtonex" sboTerm="SBO:0000185" id="R_CMCBTFtonex" name="Carboxymycobactin transport via ton system  extracellular " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFtonex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fcmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000687_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001900_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011003726_1"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CMCBTFtpp" sboTerm="SBO:0000185" id="R_CMCBTFtpp" name="Carboxymycobactin secretion  to periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CMCBTFtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cmcbtt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmcbtt_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CMCMSAD" sboTerm="SBO:0000176" id="R_CMCMSAD" name="4 carboxy 2 hydroxymuconate 6 semialdehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72195,6 +78110,96 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2t" sboTerm="SBO:0000185" id="R_CO2t" name="CO2 transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72285,9 +78290,100 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2tpp" sboTerm="SBO:0000185" id="R_CO2tpp" name="CO2 transporter via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_COALCDH" sboTerm="SBO:0000176" id="R_COALCDH" name="Coniferyl alcohol dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -72655,7 +78751,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002819_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_COt" sboTerm="SBO:0000185" id="R_COt" name="CO transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_COt_1" sboTerm="SBO:0000185" id="R_COt_1" name="Co transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -72663,7 +78759,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_COt">
+            <rdf:Description rdf:about="#R_COt_1">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
@@ -72675,11 +78771,14 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_CPPPGO" sboTerm="SBO:0000176" id="R_CPPPGO" name="Coproporphyrinogen oxidase (O2 required)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -72763,6 +78862,137 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CREAT" sboTerm="SBO:0000176" id="R_CREAT" name="Creatinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CREAT">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_creat_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sarcs_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_urea_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CREATtex" sboTerm="SBO:0000185" id="R_CREATtex" name="Creatine transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CREATtex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_creat_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_creat_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CREATtpp" sboTerm="SBO:0000185" id="R_CREATtpp" name="Creatine transport via proton symport  reversible  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CREATtpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_creat_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_creat_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011003839_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CRESt2ipp" sboTerm="SBO:0000185" id="R_CRESt2ipp" name="P-cresol transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CRESt2ipp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96887"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4crsol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4crsol_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_CREStex" sboTerm="SBO:0000185" id="R_CREStex" name="P-cresol transport vis diffusion (extra-organism to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CREStex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35072"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35073"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96888"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4crsol_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4crsol_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011003545_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CRNDH" sboTerm="SBO:0000176" id="R_CRNDH" name="Carnitine 3 dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74010,6 +80240,94 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004810_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CYP1" sboTerm="SBO:0000176" id="R_CYP1" name="MNXR19061" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CYP1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_chol4en3one_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hchol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011004007_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYP2" sboTerm="SBO:0000176" id="R_CYP2" name="CYP2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CYP2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hchol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ochol_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011004007_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_CYP3" sboTerm="SBO:0000176" id="R_CYP3" name="CYP3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_CYP3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ochol_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cchol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011004007_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CYSDDS" sboTerm="SBO:0000176" id="R_CYSDDS" name="D-cysteine desulfhydrase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74334,50 +80652,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_CYSTS" sboTerm="SBO:0000176" id="R_CYSTS" name="Cystathionine beta synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CYSTabc" sboTerm="SBO:0000185" id="R_CYSTabc" name="L cystine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_CYSTS">
+            <rdf:Description rdf:about="#R_CYSTabc">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10112"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10113"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.22"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CYSTATHIONINE-BETA-SYNTHASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97019"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1614524"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01290"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97023"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cyst__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_cyst__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_CYSabc" sboTerm="SBO:0000185" id="R_CYSabc" name="L-cysteine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -75213,6 +81514,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_Cotpp" sboTerm="SBO:0000185" id="R_Cotpp" name="Co transport via diffusion (periplasm to cytosol)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_Cotpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_Cuabc" sboTerm="SBO:0000185" id="R_Cuabc" name="Copper transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75994,6 +82324,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_016727051_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAGK160" sboTerm="SBO:0000176" id="R_DAGK160" name="Diacylglycerol kinase (n-C16:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DAGK160">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97094"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa160_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_016727051_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DAGK161" sboTerm="SBO:0000176" id="R_DAGK161" name="Diacylglycerol kinase (n-C16:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76054,6 +82415,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_016727051_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAGK181" sboTerm="SBO:0000176" id="R_DAGK181" name="Diacylglycerol kinase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DAGK181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97100"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_016727051_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DALAALAD" sboTerm="SBO:0000176" id="R_DALAALAD" name="Beta alanine L alanine dipeptidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76407,6 +82798,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003786_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DAPtex" sboTerm="SBO:0000185" id="R_DAPtex" name="1,5-Diaminopentane transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DAPtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08305"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_15dap_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_15dap_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DARBabcpp" sboTerm="SBO:0000185" id="R_DARBabcpp" name="D-arabinose transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76700,6 +83119,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001358_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DATPHs" sboTerm="SBO:0000176" id="R_DATPHs" name="DATP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DATPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08313"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_datp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DB4PS" sboTerm="SBO:0000176" id="R_DB4PS" name="3,4-Dihydroxy-2-butanone-4-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76734,6 +83184,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DC6PH" sboTerm="SBO:0000176" id="R_DC6PH" name="Diacetylchitobiose-6-phosphate hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DC6PH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96671"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_chtbs6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acgam6p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acgam_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DCAtex" sboTerm="SBO:0000185" id="R_DCAtex" name="Decanoate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77199,6 +83675,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002539_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DGSNtex" sboTerm="SBO:0000185" id="R_DGSNtex" name="Deoxyguanosine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DGSNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97324"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08324"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dgsn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dgsn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DGUNC" sboTerm="SBO:0000176" id="R_DGUNC" name="Diguanylate cyclase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -77447,48 +83951,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHBD" sboTerm="SBO:0000176" id="R_DHBD" name="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHAtex" sboTerm="SBO:0000185" id="R_DHAtex" name="Dihydroxyacetone transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_DHBD">
+            <rdf:Description rdf:about="#R_DHAtex">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/23825"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/rhea/23827"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DHBDEHYD-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01505"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01094"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97367"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08326"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_23ddhb_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_23dhb_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dha_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011001575_1"/>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011001776_1"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHCIND" sboTerm="SBO:0000176" id="R_DHCIND" name="2,3-dihydroxycinnamate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHBD" sboTerm="SBO:0000176" id="R_DHBD" name="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -77496,31 +83990,38 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DHCIND">
+            <rdf:Description rdf:about="#R_DHBD">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.87"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25067"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25068"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/25069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97378"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04600"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.28"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23824"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23825"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DHBDEHYD-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01505"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01094"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_cenchddd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_23ddhb_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_dhcinnm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_23dhb_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001575_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001776_1"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DHCINDO" sboTerm="SBO:0000176" id="R_DHCINDO" name="2,3-dihydroxycinnamate 1,2-dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -77788,30 +84289,56 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001915_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHMPTR" sboTerm="SBO:0000176" id="R_DHMPTR" name="Dihydromonapterin reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHGLYH" sboTerm="SBO:0000176" id="R_DHGLYH" name="Dehydroglycine Hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DHMPTR">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97405"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DHGLYH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhgly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DHMPTRx" sboTerm="SBO:0000176" id="R_DHMPTRx" name="Dihydromonapterin reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DHMPTRx">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_dhmpt_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_thmnp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -77844,7 +84371,7 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_DHNPA2r" sboTerm="SBO:0000176" id="R_DHNPA2r" name="Dihydroneopterin aldolase reversible" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHNPA" sboTerm="SBO:0000176" id="R_DHNPA" name="Dihydroneopterin aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -77852,18 +84379,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_DHNPA2r">
+            <rdf:Description rdf:about="#R_DHNPA">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10540"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10542"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/10543"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.25"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2NEOPTERINALDOL-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR125603"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03504"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138235"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -77873,11 +84392,11 @@
           <speciesReference species="M_dhnpt_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_6hmhpt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2ahhmp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_DHNPA_1" sboTerm="SBO:0000176" id="R_DHNPA_1" name="Dihydroneopterin aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHNPA2r" sboTerm="SBO:0000176" id="R_DHNPA2r" name="Dihydroneopterin aldolase reversible" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -77885,10 +84404,18 @@
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_DHNPA_1">
+            <rdf:Description rdf:about="#R_DHNPA2r">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.25"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2NEOPTERINALDOL-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR125603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02504"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -77898,7 +84425,7 @@
           <speciesReference species="M_dhnpt_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2ahhmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_6hmhpt_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_gcald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -78183,6 +84710,38 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_DHPM2" sboTerm="SBO:0000176" id="R_DHPM2" name="Dihydropyrimidinase (dihydrothymine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPM2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/37335"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/37336"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/37337"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/37338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02190"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_56dthm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3uib_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DHPPDA" sboTerm="SBO:0000176" id="R_DHPPDA" name="Diaminohydroxyphosphoribosylaminopyrimidine deaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -78313,6 +84872,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_043876591_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DHPTDCs2" sboTerm="SBO:0000176" id="R_DHPTDCs2" name="4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DHPTDCs2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35157"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35158"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97442"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhptd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DHQS" sboTerm="SBO:0000176" id="R_DHQS" name="3-dehydroquinate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -78482,6 +85073,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002539_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DINStex" sboTerm="SBO:0000185" id="R_DINStex" name="Deoxyinosine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DINStex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08344"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_din_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_din_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DIPEPabc1" sboTerm="SBO:0000185" id="R_DIPEPabc1" name="Dipeptide transport via ABC system  ala asp " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -79024,31 +85643,60 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000878_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DLYSPYRAT" sboTerm="SBO:0000176" id="R_DLYSPYRAT" name="D Lysinepyruvate aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DLYSabcpp" sboTerm="SBO:0000185" id="R_DLYSabcpp" name="D lysine transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DLYSPYRAT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97507"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12744"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DLYSabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__D_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_lys__D_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002037_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002187_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011003288_1"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_DLYStex" sboTerm="SBO:0000185" id="R_DLYStex" name="D lysine transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_DLYStex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_lys__D_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_6a2ohxnt_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ala__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__D_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_DMALRED" sboTerm="SBO:0000176" id="R_DMALRED" name="(S)-Malate:(acceptor) oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -79511,6 +86159,46 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DOPAtex" sboTerm="SBO:0000185" id="R_DOPAtex" name="Dopamine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DOPAtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-351596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-372542"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08363"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dopa_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_DOPDH" sboTerm="SBO:0000176" id="R_DOPDH" name="Ketoglutarate semialdehyde dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80025,6 +86713,52 @@
           <speciesReference species="M_ura_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_DURAD2" sboTerm="SBO:0000176" id="R_DURAD2" name="Dihydrothymin dehydrogenase (NADP)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DURAD2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11209"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-73616"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01028"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_56dthm_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thym_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_DURIPP" sboTerm="SBO:0000176" id="R_DURIPP" name="Deoxyuridine phosphorylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80255,6 +86989,61 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002149_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_DXYLUDtex" sboTerm="SBO:0000185" id="R_DXYLUDtex" name="1-deoxy-d-xyluose transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DXYLUDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28446"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28447"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28449"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97833"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dxyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dxyl_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_DXYLUDtpp" sboTerm="SBO:0000185" id="R_DXYLUDtpp" name="1-deoxy-d-xyluose transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_DXYLUDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97834"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dxyl_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dxyl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_D_LACt2" sboTerm="SBO:0000185" id="R_D_LACt2" name="D lactate transport via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80450,6 +87239,98 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001122_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ECHA191" sboTerm="SBO:0000176" id="R_ECHA191" name="ECHA191" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ECHA191">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cholenec8coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hcholc8coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ECHA192" sboTerm="SBO:0000176" id="R_ECHA192" name="ECHA192" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ECHA192">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cholenec5coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hcholc5coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ECHA193" sboTerm="SBO:0000176" id="R_ECHA193" name="ECHA193" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ECHA193">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cholenec3coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hcholc3coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_ECHA20" sboTerm="SBO:0000176" id="R_ECHA20" name="MNXR84970" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ECHA20">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hipecoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hipohcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ECOAH1" sboTerm="SBO:0000176" id="R_ECOAH1" name="3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -81921,6 +88802,40 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETHAtex" sboTerm="SBO:0000185" id="R_ETHAtex" name="Ethanolamine transport via diffusion (extracellular)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETHAtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-476"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10841"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etha_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ETHSO3abcpp" sboTerm="SBO:0000185" id="R_ETHSO3abcpp" name="Ethanesulfonate transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82044,6 +88959,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETOHtrpp" sboTerm="SBO:0000185" id="R_ETOHtrpp" name="Ethanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09764"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_F1PP" sboTerm="SBO:0000176" id="R_F1PP" name="D-fructose 1-phosphate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82265,6 +89215,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001824_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FACOAE60" sboTerm="SBO:0000176" id="R_FACOAE60" name="Fatty-acid-CoA thioesterase (hexanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FACOAE60">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99139"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hxcoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hxa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FACOAL100t2pp" sboTerm="SBO:0000185" id="R_FACOAL100t2pp" name="Fatty-acid-CoA ligase (decanoate transport via vectoral Co-A coupling)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83197,6 +90174,234 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_028852429_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FADB2" sboTerm="SBO:0000176" id="R_FADB2" name="FADB2" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADB2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hcholc8coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocholc8coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADB3" sboTerm="SBO:0000176" id="R_FADB3" name="FADB3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADB3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hcholc5coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocholc5coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADD17" sboTerm="SBO:0000176" id="R_FADD17" name="MNXR86378" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADD17">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cchol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cholc8coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADD3" sboTerm="SBO:0000176" id="R_FADD3" name="MNXR22341" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADD3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_hip_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hipcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADE281" sboTerm="SBO:0000176" id="R_FADE281" name="MNXR87732" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADE281">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cholc8coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cholenec8coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADE282" sboTerm="SBO:0000176" id="R_FADE282" name="MNXR87738" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADE282">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cholc3coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cholenec3coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADE30" sboTerm="SBO:0000176" id="R_FADE30" name="MNXR87739" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADE30">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_5ohhipcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hipecoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001980_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FADE51" sboTerm="SBO:0000176" id="R_FADE51" name="MNXR76950" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADE51">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocholc8coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cholc5coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_FADE52" sboTerm="SBO:0000176" id="R_FADE52" name="MNXR22325" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FADE52">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ocholc5coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cholc3coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FADMQOR" sboTerm="SBO:0000176" id="R_FADMQOR" name="Menaquinone:FAD oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83374,6 +90579,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FALDtpp" sboTerm="SBO:0000185" id="R_FALDtpp" name="Formaldehyde transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08462"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FALGTHLs" sboTerm="SBO:0000176" id="R_FALGTHLs" name="Formaldehyde glutathione ligase (spontaneous)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83407,6 +90641,9 @@
         <listOfProducts>
           <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FAS100" sboTerm="SBO:0000176" id="R_FAS100" name="Fatty acid synthase  n C100 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -84680,6 +91917,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002321_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3DCITCH" sboTerm="SBO:0000176" id="R_FE3DCITCH" name="Ferric dicitrate chelation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3DCITCH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_cit_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fe3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3dcit_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3DCITR3" sboTerm="SBO:0000176" id="R_FE3DCITR3" name="Ferric dicitrate reductase  fmn " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -84818,6 +92081,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_010999973_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine complex formation  P putida KT2440 specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3PYOVDL2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3abc" sboTerm="SBO:0000185" id="R_FE3abc" name="Iron (III) transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85265,6 +92554,41 @@
           <speciesReference species="M_fe3_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_FESD2s" sboTerm="SBO:0000176" id="R_FESD2s" name="Iron-sulfur cluster damage (nitrous oxide, spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FESD2s">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99586"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4fe4s_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_no_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_3fe4s_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_fe3_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FESR" sboTerm="SBO:0000176" id="R_FESR" name="Iron-sulfur cluster repair" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -85536,6 +92860,37 @@
           <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_FOLD3" sboTerm="SBO:0000176" id="R_FOLD3" name="Dihydropteroate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FOLD3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.15"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR143108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02201"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ahhmd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4abz_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dhpt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_043876591_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FOLR2" sboTerm="SBO:0000176" id="R_FOLR2" name="Folate reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85802,6 +93157,34 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FRD5" sboTerm="SBO:0000176" id="R_FRD5" name="FRD5" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FRD5">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99640"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10619"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mql6_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mqn6_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_FRUK" sboTerm="SBO:0000176" id="R_FRUK" name="Fructose-1-phosphate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -86482,6 +93865,34 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_G1Ptex" sboTerm="SBO:0000185" id="R_G1Ptex" name="D-glucose 1-phosphate transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_G1Ptex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99849"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08545"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_g1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_g1p_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_G1SAT" sboTerm="SBO:0000176" id="R_G1SAT" name="Glutamate-1-semialdehyde aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87348,6 +94759,34 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GAL1Ptex" sboTerm="SBO:0000185" id="R_GAL1Ptex" name="D-galactose 1-phosphate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GAL1Ptex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08572"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gal1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gal1p_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GALCTD_1" sboTerm="SBO:0000176" id="R_GALCTD_1" name="Galactarate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87488,6 +94927,28 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004126_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GALCT_D_Et" sboTerm="SBO:0000185" id="R_GALCT_D_Et" name="D-Galactarate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GALCT_D_Et">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_galct__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_galct__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GALCTt2rpp" sboTerm="SBO:0000185" id="R_GALCTt2rpp" name="D-galactarte transport via proton symport, reversible (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87556,6 +95017,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GALM2" sboTerm="SBO:0000176" id="R_GALM2" name="Aldose 1-epimerase (galactose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GALM2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28678"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ALDOSE1EPIM-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08582"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gal_bD_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gal_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001527_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GALS3" sboTerm="SBO:0000176" id="R_GALS3" name="A-galactosidase (melibiose)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87970,6 +95465,30 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002043_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GALt2_3" sboTerm="SBO:0000185" id="R_GALt2_3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GALt2_3">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_gal_bD_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gal_bD_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GALtex" sboTerm="SBO:0000185" id="R_GALtex" name="D-galactose transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -88546,6 +96065,42 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003297_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GDPMNP" sboTerm="SBO:0000176" id="R_GDPMNP" name="GDP-mannose phyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GDPMNP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00639"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GDPTPDP" sboTerm="SBO:0000176" id="R_GDPTPDP" name="Guanosine 3&apos;-diphosphate 5&apos;-triphosphate 3&apos;-diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -89434,6 +96989,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLCUR1Ptex" sboTerm="SBO:0000185" id="R_GLCUR1Ptex" name="D-glucuronate 1-phosphate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLCUR1Ptex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08621"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glcur1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glcur1p_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLCURDH" sboTerm="SBO:0000176" id="R_GLCURDH" name="Glucoronate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91185,6 +98768,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_043876861_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYALDtex" sboTerm="SBO:0000185" id="R_GLYALDtex" name="Glyceraldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLYALDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08635"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08636"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10164"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyald_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLYAT" sboTerm="SBO:0000176" id="R_GLYAT" name="Glycine C-acetyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91693,38 +99306,27 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLYCK2" sboTerm="SBO:0000176" id="R_GLYCK2" name="Glycerate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GLYCK_1" sboTerm="SBO:0000176" id="R_GLYCK_1" name="Glycerate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GLYCK2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.31"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27378"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27379"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27380"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GKI-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100329"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08572"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08647"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_GLYCK_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2pg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3pg_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
@@ -92353,6 +99955,97 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYCtpp" sboTerm="SBO:0000185" id="R_GLYCtpp" name="Glycerol transport via channel (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLYCtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29678"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507869"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08658"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLYGLNabcpp" sboTerm="SBO:0000185" id="R_GLYGLNabcpp" name="L Glycinylglutamine  Gly Gln  transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94278,6 +101971,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001519_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GTPHs" sboTerm="SBO:0000176" id="R_GTPHs" name="GTP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GTPHs">
+              <bqbiol:is>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08679"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GUACYC" sboTerm="SBO:0000176" id="R_GUACYC" name="Guanylate cyclase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94665,7 +102389,157 @@
           <speciesReference species="M_h2o2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2Ot" sboTerm="SBO:0000185" id="R_H2Ot" name="H2O transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_H2Ot">
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432065"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2Otex" sboTerm="SBO:0000185" id="R_H2Otex" name="H2O transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -94817,6 +102691,7 @@
             <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011004730_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -94964,7 +102839,102 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_043876861_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_043876861_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2SO" sboTerm="SBO:0000176" id="R_H2SO" name="Hydrogen sulfide oxidation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2SO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100493"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08688"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="2" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_so4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
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+            <rdf:Description rdf:about="#R_H2St1">
+              <bqbiol:is>
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+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
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+        <listOfProducts>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2St1pp" sboTerm="SBO:0000185" id="R_H2St1pp" name="H2s transport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2s_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2Stex" sboTerm="SBO:0000185" id="R_H2Stex" name="H2s transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -96671,6 +104641,33 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_HBCH" sboTerm="SBO:0000176" id="R_HBCH" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HBCH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hbcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctncoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011003946_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HBCHLR" sboTerm="SBO:0000176" id="R_HBCHLR" name="(3R)-3-Hydroxybutanoyl-CoA hydro-lyase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97040,9 +105037,52 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011000244_1"/>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011003430_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HCO3tex" sboTerm="SBO:0000185" id="R_HCO3tex" name="Bicarbonate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HCO3tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-2752067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10826"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13310"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hco3_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HCYSMT" sboTerm="SBO:0000176" id="R_HCYSMT" name="Homocysteine S-methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97082,6 +105122,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002758_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HDAD" sboTerm="SBO:0000176" id="R_HDAD" name="MNXR76953" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HDAD">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_49dsha_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hhd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hip_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001345_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HDH" sboTerm="SBO:0000176" id="R_HDH" name="Histidinol dehydrogenase, cytosol" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97175,6 +105242,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000335_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HETZK_1" sboTerm="SBO:0000176" id="R_HETZK_1" name="Hydroxyethylthiazole kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HETZK_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4mhetz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4mpetz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HEX1" sboTerm="SBO:0000176" id="R_HEX1" name="Hexokinase (D-glucose:ATP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97286,6 +105378,66 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HG2t3pp" sboTerm="SBO:0000185" id="R_HG2t3pp" name="Mercury (Hg+2) transport out via proton antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HG2t3pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08716"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_HG2tex" sboTerm="SBO:0000185" id="R_HG2tex" name="Mercury (Hg+2) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HG2tex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08717"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HGNTOR" sboTerm="SBO:0000176" id="R_HGNTOR" name="Homogentisateoxygen 1 2 oxidoreductase  decyclizing " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97338,6 +105490,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003989_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HGt" sboTerm="SBO:0000185" id="R_HGt" name="Mercury transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HGt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32816"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32817"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/32818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100625"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05586"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08717"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_hg2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hg2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HHDDI" sboTerm="SBO:0000176" id="R_HHDDI" name="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97365,6 +105547,52 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001762_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HIAA" sboTerm="SBO:0000176" id="R_HIAA" name="HIAA" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HIAA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hipocoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hia_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_HIAt" sboTerm="SBO:0000185" id="R_HIAt" name="THIA Transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HIAt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hia_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_hia_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HIBD" sboTerm="SBO:0000176" id="R_HIBD" name="3 hydroxyisobutyrate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -97423,6 +105651,31 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003947_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HIPB" sboTerm="SBO:0000176" id="R_HIPB" name="HIPB" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HIPB">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hipcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5ohhipcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HISDr" sboTerm="SBO:0000176" id="R_HISDr" name="Histidase r" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98151,36 +106404,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000067_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HMR_0188" sboTerm="SBO:0000176" id="R_HMR_0188" name="Long-Chain-Fatty-Acid Coenzyme A Ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HMPSCD" sboTerm="SBO:0000176" id="R_HMPSCD" name="2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_HMR_0188">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HMPSCD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100668"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hmpscoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_sbzcoa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_028852429_1"/>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002660_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HMR_6515" sboTerm="SBO:0000176" id="R_HMR_6515" name="3-Mercaptopyruvate:Cyanide Sulfurtransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HMR_0188" sboTerm="SBO:0000176" id="R_HMR_0188" name="Long-Chain-Fatty-Acid Coenzyme A Ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -98188,7 +106442,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_HMR_6515">
+            <rdf:Description rdf:about="#R_HMR_0188">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -98196,13 +106450,18 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_mercppyr_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_so3_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddca_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_tsul_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ddcacoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_028852429_1"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_HOMt2pp" sboTerm="SBO:0000185" id="R_HOMt2pp" name="L-homoserineserine efflux via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -98300,6 +106559,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004192_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HOPNTAL2" sboTerm="SBO:0000176" id="R_HOPNTAL2" name="4-hydroxy-2-oxopentanoate aldolase(p-xylene)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HOPNTAL2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.n4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.39"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.43"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100680"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05298"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn03610"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4hoxoh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ppal_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HPACt2r" sboTerm="SBO:0000185" id="R_HPACt2r" name="Ydroxyphenylacetate transport in via proton symporter" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98356,6 +106646,33 @@
           <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_HPPK" sboTerm="SBO:0000176" id="R_HPPK" name="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_HPPK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2ahhmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2ahhmd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_HPPK2_1" sboTerm="SBO:0000176" id="R_HPPK2_1" name="6-hydroxymethyl-dihydropterin pyrophosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -98482,7 +106799,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HPROb" sboTerm="SBO:0000176" id="R_HPROb" name="L hydroxyproline reductase  NADP " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_HPROx" sboTerm="SBO:0000176" id="R_HPROx" name="Trans-4-Hydroxy-L-proline:NAD+ 5-oxidoreductase Arginine and proline metabolism EC:1.5.1.2" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -98490,27 +106807,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_HPROb">
+            <rdf:Description rdf:about="#R_HPROx">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03293"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02358"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02356"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_1p3h5c_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_4hpro_LT_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_1p3h5c_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_HPYRI" sboTerm="SBO:0000176" id="R_HPYRI" name="Hydroxypyruvate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -98664,6 +106981,88 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_HSA" sboTerm="SBO:0000176" id="R_HSA" name="MNXR75761" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HSA">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_3hsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fmnh2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_34dhsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fmn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000717_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011003533_1"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_HSAC" sboTerm="SBO:0000176" id="R_HSAC" name="R04597" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HSAC">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_34dhsa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_49dsha_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_HSAE" sboTerm="SBO:0000176" id="R_HSAE" name="R09960" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_HSAE">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hhd_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hoxoh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011004189_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_HSDy" sboTerm="SBO:0000176" id="R_HSDy" name="Homoserine dehydrogenase (NADPH)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -100387,7 +108786,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_INOSTO" sboTerm="SBO:0000176" id="R_INOSTO" name="Myo-Inositol:oxygen oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_INDPYRD" sboTerm="SBO:0000176" id="R_INDPYRD" name="Indole 3 pyruvate decarboxylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -100395,31 +108794,31 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_INOSTO">
+            <rdf:Description rdf:about="#R_INDPYRD">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.99.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/23696"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/23697"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/23698"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/23699"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MYO-INOSITOL-OXYGENASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100839"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01184"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18019"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.43"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.74"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:4.1.1.74-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100837"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01974"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01450"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_indpyr_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_id3acald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_INS2D" sboTerm="SBO:0000176" id="R_INS2D" name="Inositol 2-dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -102186,6 +110585,92 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001077_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_KG6PDC" sboTerm="SBO:0000176" id="R_KG6PDC" name="3-keto-L-gulonate 6-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_KG6PDC">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14353"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14356"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.85"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-705"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04928"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_3dhgulnp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xu5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_KSH" sboTerm="SBO:0000176" id="R_KSH" name="R09860" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_KSH">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_andrs14dn317dn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_9ohadd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_KSTD" sboTerm="SBO:0000176" id="R_KSTD" name="MNXR85993" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_KSTD">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_andrstndn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_andrs14dn317dn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_Kabcpp" sboTerm="SBO:0000185" id="R_Kabcpp" name="Potassium ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102757,30 +111242,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_LAT" sboTerm="SBO:0000176" id="R_LAT" name="R00457" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_LAT">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_lys__L_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_L2aadp6sa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_LCADi" sboTerm="SBO:0000176" id="R_LCADi" name="Lactaldehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103585,6 +112046,32 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_LEVUACOAL" sboTerm="SBO:0000176" id="R_LEVUACOAL" name="Levulinate CoA ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_LEVUACOAL">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4oxptcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_LGTHL" sboTerm="SBO:0000176" id="R_LGTHL" name="Lactoylglutathione lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -103695,6 +112182,57 @@
           <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_LPCOXc" sboTerm="SBO:0000176" id="R_LPCOXc" name="L Pipecolateoxygen 1 6 oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_LPCOXc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.3.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11992"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11993"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/11995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-PIPECOLATE-OXIDASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR107370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-6783880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02204"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01580"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_Lpipecol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thp2c_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011003287_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_LPLIPAL1E181d11pp" sboTerm="SBO:0000176" id="R_LPLIPAL1E181d11pp" name="Lysophospholipase L1  2 acylglycerophosphoethanolamine  n C181   periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104415,40 +112953,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_M1PD" sboTerm="SBO:0000176" id="R_M1PD" name="Mannitol-1-phosphate 5-dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_M1PD">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.17"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19661"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19663"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19664"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MANNPDEHYDROG-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101311"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02703"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_mnl1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MACACI" sboTerm="SBO:0000176" id="R_MACACI" name="Maleylacetoacetate isomerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104727,6 +113231,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MALEI" sboTerm="SBO:0000176" id="R_MALEI" name="Maleate cis trans isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MALEI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13171"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13172"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.2.1.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALEATE-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00803"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_male_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fum_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_043876743_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MALS" sboTerm="SBO:0000176" id="R_MALS" name="Malate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105459,6 +113998,82 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MAN1PT" sboTerm="SBO:0000176" id="R_MAN1PT" name="Mannose 1 phosphate guanylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MAN1PT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15231"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/15232"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.7.7.13-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00641"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000470_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MAN1PT2" sboTerm="SBO:0000176" id="R_MAN1PT2" name="Mannose-1-phosphate guanylyltransferase (GDP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MAN1PT2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12905"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12906"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12907"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/12908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MANNPGUANYLTRANGDP-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00883"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00640"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gdpmann_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000470_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MAN6PI" sboTerm="SBO:0000176" id="R_MAN6PI" name="Mannose-6-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105489,6 +114104,94 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002582_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MANGLYCptspp" sboTerm="SBO:0000185" id="R_MANGLYCptspp" name="2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANGLYCptspp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08882"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_manglyc_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pep_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_man6pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000312_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MANGLYCtex" sboTerm="SBO:0000185" id="R_MANGLYCtex" name="2-O-alpha-mannosyl-D-glycerate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANGLYCtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08883"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_manglyc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_manglyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MANPGH" sboTerm="SBO:0000176" id="R_MANPGH" name="2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MANPGH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5216"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08884"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_man6pglyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_man6p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MANpts" sboTerm="SBO:0000185" id="R_MANpts" name="D-mannose transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105675,6 +114378,48 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000246_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MCBTS3" sboTerm="SBO:0000176" id="R_MCBTS3" name="MCBTS3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MCBTS3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101410"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10710"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_lys__L_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="3.5" constant="true"/>
+          <speciesReference species="M_occoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_salc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_cmcbtt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="5" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001744_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MCCC" sboTerm="SBO:0000176" id="R_MCCC" name="Methylcrotonoyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -105861,6 +114606,41 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003438_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MCPST" sboTerm="SBO:0000176" id="R_MCPST" name="3-mercaptopyruvate sulfurtransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MCPST">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21740"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21741"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21742"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/21743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MERCAPYSTRANS-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02230"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cyan_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mercppyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MCSNAH" sboTerm="SBO:0000176" id="R_MCSNAH" name="5-Methylcytosine aminohydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106705,25 +115485,30 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001586_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MELIB_Et" sboTerm="SBO:0000185" id="R_MELIB_Et" name="Melibiose transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_MELIBt2" sboTerm="SBO:0000185" id="R_MELIBt2" name="Melibiose transport in via symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MELIB_Et">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MELIBt2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-94"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138587"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
+          <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
           <speciesReference species="M_melib_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_melib_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -106783,6 +115568,75 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MEOHtex" sboTerm="SBO:0000185" id="R_MEOHtex" name="Methanol transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MEOHtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10570"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_MEOHtrpp" sboTerm="SBO:0000185" id="R_MEOHtrpp" name="Methanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MEOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34873"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10570"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_meoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MEPCT" sboTerm="SBO:0000176" id="R_MEPCT" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107045,6 +115899,68 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_METOX1s" sboTerm="SBO:0000176" id="R_METOX1s" name="Methionine oxidation (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METOX1s">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09942"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_METOX2s" sboTerm="SBO:0000176" id="R_METOX2s" name="Methionine oxidation 2 (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_METOX2s">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-7188"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08913"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
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+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_METRR" sboTerm="SBO:0000176" id="R_METRR" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -107109,221 +116025,230 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
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+      <reaction metaid="R_METSOXR1" sboTerm="SBO:0000176" id="R_METSOXR1" name="L-methionine-S-oxide reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
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-            <rdf:Description rdf:about="#R_METSOX1abcpp">
+            <rdf:Description rdf:about="#R_METSOXR1">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05613"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101484"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06077"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08918"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
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-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_S__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
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         <listOfProducts>
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-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000034_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000733_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001138_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002691_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_043876714_1"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011001138_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_043876714_1"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011002691_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_043876714_1"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX1tex" sboTerm="SBO:0000185" id="R_METSOX1tex" name="L-methionine S-oxide diffusion (extracellular)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METSOXR2" sboTerm="SBO:0000176" id="R_METSOXR2" name="L-methionine-R-sulfoxide reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_METSOX1tex">
+            <rdf:Description rdf:about="#R_METSOXR2">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07439"/>
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         </annotation>
         <listOfReactants>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_metsox_S__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000034_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000733_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001138_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001685_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002691_1"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011001138_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011001685_1"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011001685_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011002691_1"/>
+            </fbc:and>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX2abcpp" sboTerm="SBO:0000185" id="R_METSOX2abcpp" name="L-methionine R-oxide transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METSR_R1" sboTerm="SBO:0000176" id="R_METSR_R1" name="L methionine R oxide reductase  trdrd " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_METSOX2abcpp">
+            <rdf:Description rdf:about="#R_METSR_R1">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-7185"/>
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101485"/>
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-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
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         <listOfProducts>
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-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_METSOX2tex" sboTerm="SBO:0000185" id="R_METSOX2tex" name="L-methionine R-oxide diffusion (extracellular)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METSR_S1" sboTerm="SBO:0000176" id="R_METSR_S1" name="L methionine S oxide reductase  trdrd " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_METSOX2tex">
+            <rdf:Description rdf:about="#R_METSR_S1">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08917"/>
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         <listOfReactants>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_metsox_R__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
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-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
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-      <reaction metaid="R_METSOXR1" sboTerm="SBO:0000176" id="R_METSOXR1" name="L-methionine-S-oxide reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METSRabc" sboTerm="SBO:0000185" id="R_METSRabc" name="L methionine R oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
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         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_METSOXR1">
+            <rdf:Description rdf:about="#R_METSRabc">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn06077"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08918"/>
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-          <speciesReference species="M_metsox_S__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
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-          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
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-              <fbc:geneProductRef fbc:geneProduct="G_WP_043876714_1"/>
-            </fbc:and>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000872_1"/>
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-      <reaction metaid="R_METSOXR2" sboTerm="SBO:0000176" id="R_METSOXR2" name="L-methionine-R-sulfoxide reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METSabc" sboTerm="SBO:0000185" id="R_METSabc" name="L methionine S oxide transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
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           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_METSOXR2">
+            <rdf:Description rdf:about="#R_METSabc">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.8.4.14-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138594"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn07439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-511"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08914"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_trdrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_trdox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011000034_1"/>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011000733_1"/>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011001138_1"/>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011001685_1"/>
-            <fbc:geneProductRef fbc:geneProduct="G_WP_011002691_1"/>
-            <fbc:and>
-              <fbc:geneProductRef fbc:geneProduct="G_WP_011001138_1"/>
-              <fbc:geneProductRef fbc:geneProduct="G_WP_011001685_1"/>
-            </fbc:and>
-            <fbc:and>
-              <fbc:geneProductRef fbc:geneProduct="G_WP_011001685_1"/>
-              <fbc:geneProductRef fbc:geneProduct="G_WP_011002691_1"/>
-            </fbc:and>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000872_1"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_METabc" sboTerm="SBO:0000185" id="R_METabc" name="L-methionine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -107808,7 +116733,10 @@
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_019718524_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_019718524_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MGt5" sboTerm="SBO:0000185" id="R_MGt5" name="Magnesium transport in/out via permease (no H+)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -107968,32 +116896,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001110_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MI1PS" sboTerm="SBO:0000176" id="R_MI1PS" name="Myo Inositol 1 phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_MI1PS">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.5.1.4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00609"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_g6p_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MICITDr" sboTerm="SBO:0000176" id="R_MICITDr" name="2-methylisocitrate dehydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108727,6 +117629,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MNL1P_Et" sboTerm="SBO:0000185" id="R_MNL1P_Et" name="D-Mannitol 1-phosphate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_MNL1P_Et">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_mnl1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mnl1p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_MNLpts" sboTerm="SBO:0000185" id="R_MNLpts" name="Mannitol transport via PEP:Pyr PTS" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108902,6 +117826,44 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MNtex" sboTerm="SBO:0000185" id="R_MNtex" name="Manganese (Mn+2) transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-16"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08952"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mn2_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MOAT" sboTerm="SBO:0000176" id="R_MOAT" name="3-deoxy-D-manno-octulosonic acid transferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -109719,6 +118681,39 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000058_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_MTHTHFSs" sboTerm="SBO:0000176" id="R_MTHTHFSs" name="(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_MTHTHFSs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35159"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-10017"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101756"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mththf_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_MTI" sboTerm="SBO:0000176" id="R_MTI" name="Maltose trehalose isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110047,6 +119042,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_N2Otpp" sboTerm="SBO:0000185" id="R_N2Otpp" name="Nitrious oxide transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_N2Otpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08966"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08967"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_n2o_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NACGS" sboTerm="SBO:0000176" id="R_NACGS" name="N-(1-amino-1-carboxy-2-ethyl)-glutamic acid Synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110075,6 +119099,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003729_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NACHY" sboTerm="SBO:0000176" id="R_NACHY" name="Nicotinic acid 6 Hydroxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NACHY">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101859"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12747"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_6hnac_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:and>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000585_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001827_1"/>
+          </fbc:and>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NACODA" sboTerm="SBO:0000176" id="R_NACODA" name="N-acetylornithine deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110411,7 +119467,10 @@
           <speciesReference species="M_nadhx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHHS" sboTerm="SBO:0000176" id="R_NADHHS" name="NADH hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -110437,7 +119496,10 @@
           <speciesReference species="M_nadhx__S_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHPO" sboTerm="SBO:0000176" id="R_NADHPO" name="NADH peroxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -110611,7 +119673,10 @@
           <speciesReference species="M_nadphx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHHS" sboTerm="SBO:0000176" id="R_NADPHHS" name="NADPH hydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -110637,7 +119702,41 @@
           <speciesReference species="M_nadphx__S_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002656_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NADPHQR" sboTerm="SBO:0000176" id="R_NADPHQR" name="NADPHQR" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NADPHQR">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10995"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mqn6_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_mql6_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002254_1"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHQR2" sboTerm="SBO:0000176" id="R_NADPHQR2" name="NADPH Quinone Reductase (Ubiquinone-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -111663,6 +120762,70 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001161_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NFMLDF" sboTerm="SBO:0000176" id="R_NFMLDF" name="N Formyl maleate deformylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NFMLDF">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30844"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30845"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11318"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101944"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12748"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_for_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_NH3c" sboTerm="SBO:0000176" id="R_NH3c" name="Ammomnium proton dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH3c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101948"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NH4OHDs" sboTerm="SBO:0000176" id="R_NH4OHDs" name="NH4OH dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -111743,6 +120906,7 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
             <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -111796,7 +120960,10 @@
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_020831101_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_020831101_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NI2t4pp" sboTerm="SBO:0000185" id="R_NI2t4pp" name="Nickel transport out via antiport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -112944,6 +122111,9 @@
         <listOfProducts>
           <speciesReference species="M_novbcn_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NOVBCNtpp" sboTerm="SBO:0000185" id="R_NOVBCNtpp" name="Novobiocin transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -112978,7 +122148,7 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NOt" sboTerm="SBO:0000185" id="R_NOt" name="NO transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NOtex" sboTerm="SBO:0000185" id="R_NOtex" name="Nitric oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -112986,7 +122156,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NOt">
+            <rdf:Description rdf:about="#R_NOtex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101998"/>
@@ -112999,10 +122169,13 @@
           <speciesReference species="M_no_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_no_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NOtex" sboTerm="SBO:0000185" id="R_NOtex" name="Nitric oxide transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NOtpp" sboTerm="SBO:0000185" id="R_NOtpp" name="NO transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -113010,7 +122183,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NOtex">
+            <rdf:Description rdf:about="#R_NOtpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101998"/>
@@ -113020,15 +122193,40 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_no_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_no_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_no_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NP1_1" sboTerm="SBO:0000176" id="R_NP1_1" name="Nucleotide phosphatase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_NP1_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_nicrns_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NPHS" sboTerm="SBO:0000176" id="R_NPHS" name="Naphthoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113064,6 +122262,44 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003946_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NT5C" sboTerm="SBO:0000176" id="R_NT5C" name="5&apos;-nucleotidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NT5C">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30937"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30938"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02400"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nicrns_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011003138_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTD1" sboTerm="SBO:0000176" id="R_NTD1" name="5&apos;-nucleotidase (dUMP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113834,6 +123070,118 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002737_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP10" sboTerm="SBO:0000176" id="R_NTPP10" name="Nucleoside triphosphate pyrophosphorylase (ditp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP10">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28343"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1602"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02518"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_dimp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002089_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NTPP11" sboTerm="SBO:0000176" id="R_NTPP11" name="Nucleoside triphosphate pyrophosphorylase (xtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP11">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01962"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002089_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPP2" sboTerm="SBO:0000176" id="R_NTPP2" name="Nucleoside triphosphate pyrophosphorylase (gtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114070,6 +123418,63 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002124_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP9" sboTerm="SBO:0000176" id="R_NTPP9" name="Nucleoside triphosphate pyrophosphorylase (itp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP9">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00514"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002089_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPTP1" sboTerm="SBO:0000176" id="R_NTPTP1" name="Nucleoside triphosphate tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114331,7 +123736,43 @@
           <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="O2 transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_O2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05468"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09734"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OAADC" sboTerm="SBO:0000176" id="R_OAADC" name="Oxaloacetate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -115124,7 +124565,10 @@
           <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011003641_1"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011003641_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OMPDC" sboTerm="SBO:0000176" id="R_OMPDC" name="Orotidine-5&apos;-phosphate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -116631,34 +126075,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PACALDt" sboTerm="SBO:0000185" id="R_PACALDt" name="Phenylacetaldehyde transport  extracellular " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PACALDt">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-284"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102312"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13373"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13374"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_pacald_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_pacald_e" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PACALDtex" sboTerm="SBO:0000185" id="R_PACALDtex" name="Phenethylacetaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -116981,6 +126397,32 @@
           <speciesReference species="M_pi_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PAPA181" sboTerm="SBO:0000176" id="R_PAPA181" name="Phosphatidate phosphatase (n-C18:1)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PAPA181">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102356"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pa181_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr181_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PAPPT3" sboTerm="SBO:0000176" id="R_PAPPT3" name="Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117629,6 +127071,30 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PDYXPT_c" sboTerm="SBO:0000176" id="R_PDYXPT_c" name="Pyridoxamine-pyruvic transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PDYXPT_c">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_pydam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydx_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PE120abcpp" sboTerm="SBO:0000185" id="R_PE120abcpp" name="Phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -117883,7 +127349,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PEAMNOpp" sboTerm="SBO:0000176" id="R_PEAMNOpp" name="Phenethylamine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PEAMNO" sboTerm="SBO:0000176" id="R_PEAMNO" name="Phenethylamine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -117891,7 +127357,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PEAMNOpp">
+            <rdf:Description rdf:about="#R_PEAMNO">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.21"/>
@@ -117923,14 +127389,14 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peamn_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h2o2_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pacald_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pacald_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PEAMNtex" sboTerm="SBO:0000185" id="R_PEAMNtex" name="Phenethylamine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -117966,6 +127432,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PEAtabcpp" sboTerm="SBO:0000185" id="R_PEAtabcpp" name="Phenyl ethylamine transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PEAtabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peamn_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_peamn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PENTSOtex" sboTerm="SBO:0000185" id="R_PENTSOtex" name="Pentasulfonate transport via diffusion  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -118769,6 +128262,50 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004238_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PGLYCP" sboTerm="SBO:0000176" id="R_PGLYCP" name="Phosphoglycolate phosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PGLYCP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/14372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GPH-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102543"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01334"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00980"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyclt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000539_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000849_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011000994_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001311_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002071_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011003790_1"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PGM" sboTerm="SBO:0000176" id="R_PGM" name="Phosphoglycerate mutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119813,43 +129350,6 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PHCD" sboTerm="SBO:0000176" id="R_PHCD" name="L-1-pyrroline-3-hydroxy-5-carboxylate dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PHCD">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.88"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31155"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31157"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/31158"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HYDROXYPYRROLINEDEH-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102616"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04444"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_1p3h5c_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_e4hglu_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PHEDCAtexi" sboTerm="SBO:0000185" id="R_PHEDCAtexi" name="1  Phenyldecanoic acid transport via diffusion  extracellular to periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120527,29 +130027,31 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PKETX" sboTerm="SBO:0000176" id="R_PKETX" name="Phosphoketolase (xylulose-5-phosphate utilizing)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PLCD" sboTerm="SBO:0000176" id="R_PLCD" name="PLCD" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_PKETX">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PLCD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102900"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptd1ino160_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_actp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PLIPA1A160pp" sboTerm="SBO:0000176" id="R_PLIPA1A160pp" name="Phospholipase A1 (phosphatidate, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -121086,6 +130588,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000067_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PNP" sboTerm="SBO:0000176" id="R_PNP" name="Purine nucleoside phosphorylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PNP">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-7092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01646"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_rnam_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ncam_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PNTK" sboTerm="SBO:0000176" id="R_PNTK" name="Pantothenate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -121378,6 +130912,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004393_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PPALtex" sboTerm="SBO:0000185" id="R_PPALtex" name="Propanal transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PPALtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103071"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09170"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ppal_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ppal_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_PPAt2pp" sboTerm="SBO:0000185" id="R_PPAt2pp" name="H+/Propionate symporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -122486,6 +132049,30 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PRCOA1" sboTerm="SBO:0000176" id="R_PRCOA1" name="MNXR76960" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PRCOA1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_hcholc3coa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_andrstndn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_ppcoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PRFGCL" sboTerm="SBO:0000176" id="R_PRFGCL" name="Phosphoribosylformylglycinamidine cyclo-ligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -123852,6 +133439,30 @@
           <speciesReference species="M_ade_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_PUNP4_1" sboTerm="SBO:0000176" id="R_PUNP4_1" name="Purine-nucleoside phosphorylase (Deoxyguanosine)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PUNP4_1">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_dgsn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dr1p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gua_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PUNP6" sboTerm="SBO:0000176" id="R_PUNP6" name="Purine-nucleoside phosphorylase (Deoxyinosine)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124074,6 +133685,32 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002594_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PY5CDHE" sboTerm="SBO:0000176" id="R_PY5CDHE" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PY5CDHE">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_1p3h5c_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_e4hglu_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PYAM5PO" sboTerm="SBO:0000176" id="R_PYAM5PO" name="Pyridoxamine 5&apos;-phosphate oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124130,6 +133767,58 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PYDXK" sboTerm="SBO:0000176" id="R_PYDXK" name="Pyridoxal kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYDXK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.35"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYRIDOXKIN-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-964970"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00174"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00124"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydx_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PYDXNO" sboTerm="SBO:0000176" id="R_PYDXNO" name="Pyridoxine oxidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124168,42 +133857,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000721_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PYDXOR" sboTerm="SBO:0000176" id="R_PYDXOR" name="Pyridoxine:NADP+ 4-oxidoreductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PYDXNtr" sboTerm="SBO:0000185" id="R_PYDXNtr" name="Pyridoxine transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_PYDXOR">
+            <rdf:Description rdf:about="#R_PYDXNtr">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.65"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16130"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/16132"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PYRIDOXINE-4-DEHYDROGENASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103366"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01708"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28470"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28471"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28472"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28473"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-205"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13097"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pydx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydxn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pydxn_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PYDXS" sboTerm="SBO:0000176" id="R_PYDXS" name="Pyridoxal 5-phosphate synthase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PYDXO" sboTerm="SBO:0000176" id="R_PYDXO" name="Pyridoxal oxidase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -124211,30 +133895,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_PYDXS">
+            <rdf:Description rdf:about="#R_PYDXO">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.3.6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09566"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_g3p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ru5p__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/>
+          <speciesReference species="M_pydx_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="3" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pydx5p_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_pydam_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000721_1"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_PYK" sboTerm="SBO:0000176" id="R_PYK" name="Pyruvate kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -124509,6 +134193,74 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003375_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PYRDOX" sboTerm="SBO:0000176" id="R_PYRDOX" name="2 5 dihydroxypyridine dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYRDOX">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.13.11.9-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12749"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_dhpyr_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nfmalm_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_PYRZAM" sboTerm="SBO:0000176" id="R_PYRZAM" name="Pyrazinamidase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PYRZAM">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.107"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-646"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101345"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02523"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_malm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_male_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PYRt2" sboTerm="SBO:0000185" id="R_PYRt2" name="Pyruvate transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -124761,7 +134513,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_QUIN2tex" sboTerm="SBO:0000185" id="R_QUIN2tex" name="Quinate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_QUIN2tpp" sboTerm="SBO:0000185" id="R_QUIN2tpp" name="Quinate transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -124769,7 +134521,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_QUIN2tex">
+            <rdf:Description rdf:about="#R_QUIN2tpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/35195"/>
@@ -124784,10 +134536,10 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_quin_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_quin_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_QUINtpp" sboTerm="SBO:0000185" id="R_QUINtpp" name="Quinateproton symport transport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -125113,6 +134865,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000965_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_RBP4E" sboTerm="SBO:0000176" id="R_RBP4E" name="L-ribulose-phosphate 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_RBP4E">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22369"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/22371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RIBULPEPIM-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103434"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn04082"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ru5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_xu5p__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_RECOAH10" sboTerm="SBO:0000176" id="R_RECOAH10" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxynonanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125764,7 +135548,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002779_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_RHA100tex" sboTerm="SBO:0000185" id="R_RHA100tex" name="R 3 Hydroxy acid transport diffusion C100  extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHA40tpp" sboTerm="SBO:0000185" id="R_RHA40tpp" name="R 3 Hydroxy acid transport diffusion C40   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -125772,7 +135556,7 @@
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         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_RHA100tex">
+            <rdf:Description rdf:about="#R_RHA40tpp">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -125780,21 +135564,21 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_R_3hdcaa_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_bhb_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_R_3hdcaa_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_RHA100tpp" sboTerm="SBO:0000185" id="R_RHA100tpp" name="R 3 Hydroxy acid transport diffusion C100   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHACOAE100" sboTerm="SBO:0000176" id="R_RHACOAE100" name="R hydroxy acyl CoA thioesterase  C100 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_RHA100tpp">
+            <rdf:Description rdf:about="#R_RHACOAE100">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -125802,32 +135586,13 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_R_3hdcaa_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_R_3hdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_R_3hdcaa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_RHA40tpp" sboTerm="SBO:0000185" id="R_RHA40tpp" name="R 3 Hydroxy acid transport diffusion C40   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_RHA40tpp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_bhb_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_bhb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_RHACOAE120" sboTerm="SBO:0000176" id="R_RHACOAE120" name="R hydroxy acyl CoA thioesterase  C120 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -126005,6 +135770,31 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_RHACOAE160" sboTerm="SBO:0000176" id="R_RHACOAE160" name="R hydroxy acyl CoA thioesterase  C160 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHACOAE160">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hhdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hhdca_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_RHACOAE50" sboTerm="SBO:0000176" id="R_RHACOAE50" name="R hydroxy acyl CoA thioesterase  C50 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -126405,7 +136195,7 @@
           <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_RHCYS" sboTerm="SBO:0000176" id="R_RHCYS" name="5 deoxyribos 5 ylhomocysteinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHCCE" sboTerm="SBO:0000176" id="R_RHCCE" name="S-ribosylhomocysteine cleavage enzyme" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -126413,24 +136203,30 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_RHCYS">
+            <rdf:Description rdf:about="#R_RHCCE">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17754"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/17756"/>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00955"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RIBOSYLHOMOCYSTEINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104026"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn14169"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_rhcys_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
+          <speciesReference species="M_dhptd_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_RIBabc" sboTerm="SBO:0000185" id="R_RIBabc" name="D-ribose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -127030,63 +136826,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_RNMK" sboTerm="SBO:0000176" id="R_RNMK" name="Ribosylnicotinamide kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_RNMK">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14017"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14019"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.22"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RIBOSYLNICOTINAMIDE-KINASE-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-8869627"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-8869633"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02324"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01671"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_rnam_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_RNTR1" sboTerm="SBO:0000176" id="R_RNTR1" name="Ribonucleoside triphosphate reductase  ATP " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -127606,6 +137345,28 @@
           <speciesReference species="M_salchs4_e" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_SALCt" sboTerm="SBO:0000185" id="R_SALCt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SALCt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_salc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_salc_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SAOR" sboTerm="SBO:0000176" id="R_SAOR" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -128092,6 +137853,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SELt" sboTerm="SBO:0000185" id="R_SELt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SELt">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_sel_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_sel_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SELtex" sboTerm="SBO:0000185" id="R_SELtex" name="Selenate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -128945,6 +138728,99 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000869_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SLNTabcpp" sboTerm="SBO:0000185" id="R_SLNTabcpp" name="Selenite ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_SLNTabcpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_slnt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001732_1"/>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011001285_1"/>
+              <fbc:geneProductRef fbc:geneProduct="G_WP_011001732_1"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_SLNTtex" sboTerm="SBO:0000185" id="R_SLNTtex" name="Selenite transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SLNTtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34892"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34893"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/34894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104325"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_slnt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_slnt_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_SLNTtpp" sboTerm="SBO:0000185" id="R_SLNTtpp" name="Selenite transport via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SLNTtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104445"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_slnt_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_slnt_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001732_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_SMIA1" sboTerm="SBO:0000176" id="R_SMIA1" name="Staphyloferrin A Mediated Iron Acquisition" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129529,6 +139405,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_SPT_syn" sboTerm="SBO:0000176" id="R_SPT_syn" name="Serine-glyoxilate aminotransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_SPT_syn">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/19128"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.45"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00588"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00424"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ser__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hpyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_SSALx" sboTerm="SBO:0000176" id="R_SSALx" name="Succinate-semialdehyde dehydrogenase (NAD)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129750,33 +139661,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011003731_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_SUCBZT1" sboTerm="SBO:0000176" id="R_SUCBZT1" name="Succinyl:benzoate CoA transferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_SUCBZT1">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104614"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
-          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_benzcoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succ_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_SUCBZT2" sboTerm="SBO:0000176" id="R_SUCBZT2" name="Succinyl:4-hydroxybenzoate CoA transferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -130530,6 +140414,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_St" sboTerm="SBO:0000185" id="R_St" name="Sulfur diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_St">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_s_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_T2ECR" sboTerm="SBO:0000176" id="R_T2ECR" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -130718,29 +140629,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011004286_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TARTR_L_Et" sboTerm="SBO:0000185" id="R_TARTR_L_Et" name="L-tartrate transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TARTRtex" sboTerm="SBO:0000185" id="R_TARTRtex" name="Tartrate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_TARTR_L_Et">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TARTRtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104724"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09284"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
           <speciesReference species="M_tartr__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_tartr__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tartr__L_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TARTRtex" sboTerm="SBO:0000185" id="R_TARTRtex" name="Tartrate transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TARTRtpp" sboTerm="SBO:0000185" id="R_TARTRtpp" name="Tartrate facilitated transport periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -130748,7 +140665,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TARTRtex">
+            <rdf:Description rdf:about="#R_TARTRtpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104724"/>
@@ -130759,14 +140676,11 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_tartr__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tartr__L_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_tartr__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tartr__L_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
-        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TAUDO" sboTerm="SBO:0000176" id="R_TAUDO" name="Taurine dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -131085,6 +140999,9 @@
         <listOfProducts>
           <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TDP" sboTerm="SBO:0000176" id="R_TDP" name="Thiamin pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -131167,6 +141084,120 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002446_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TETDHpp1" sboTerm="SBO:0000185" id="R_TETDHpp1" name="Tetrathionate Dehydrogenase menaquinone 8  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TETDHpp1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104779"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tet_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tsul_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002295_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TETDHpp2" sboTerm="SBO:0000185" id="R_TETDHpp2" name="Tetrathionate Dehydrogenase Demethylmenaquinol 8 periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TETDHpp2">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104780"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dmmql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tet_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_tsul_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002295_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TETDHpp3" sboTerm="SBO:0000185" id="R_TETDHpp3" name="Tetrathionate Dehydrogenase ubiquinone 8  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TETDHpp3">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104781"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tet_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tsul_p" stoichiometry="2" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011002295_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_TETtex" sboTerm="SBO:0000185" id="R_TETtex" name="Tetrathionate transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TETtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104796"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_tet_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_tet_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_TGBPA" sboTerm="SBO:0000176" id="R_TGBPA" name="Tagatose-bisphosphate aldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131384,6 +141415,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_THMDtex" sboTerm="SBO:0000185" id="R_THMDtex" name="Thymidine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_THMDtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10916"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_thymd_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_thymd_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_THMabcpp" sboTerm="SBO:0000185" id="R_THMabcpp" name="Thiamine transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131447,32 +141507,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_THMtrbc" sboTerm="SBO:0000185" id="R_THMtrbc" name="Thiamine transprot (passive - red blood cell)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_THMtrbc">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR131128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09300"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn11006"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_thm_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_thm_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_THRA" sboTerm="SBO:0000176" id="R_THRA" name="Threonine aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131936,6 +141970,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011000942_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_THYMtex" sboTerm="SBO:0000185" id="R_THYMtex" name="Thymine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_THYMtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-524"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09309"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_thym_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_thym_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_THZPSN" sboTerm="SBO:0000176" id="R_THZPSN" name="Thiazole phosphate synthesis" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131994,6 +142057,43 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_THZSN_1" sboTerm="SBO:0000176" id="R_THZSN_1" name="Thiazole synthesis from xylulose" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_THZSN_1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104863"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cys__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dxyl_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fdxo_2_2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4mhetz_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_fdxrd_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000076_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TKT1" sboTerm="SBO:0000176" id="R_TKT1" name="Transketolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132146,6 +142246,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TMDPK" sboTerm="SBO:0000176" id="R_TMDPK" name="Thiamine diphosphokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TMDPK">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138867"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00440"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thm_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_amp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thmpp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_TMDPP" sboTerm="SBO:0000176" id="R_TMDPP" name="Thymidine phosphorylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132321,6 +142450,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TNTHAC2" sboTerm="SBO:0000176" id="R_TNTHAC2" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -132346,6 +142478,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TNTR1" sboTerm="SBO:0000176" id="R_TNTR1" name="TNT nitroreductase 4 Hydroxylamino 2 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -132602,6 +142737,32 @@
           <speciesReference species="M_tnt_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_TOLt2pp" sboTerm="SBO:0000185" id="R_TOLt2pp" name="Toluene transport in via proton symport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TOLt2pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104916"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_TOLt5" sboTerm="SBO:0000185" id="R_TOLt5" name="Toluene  transport out via proton antiport  cytosolexternal " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132734,32 +142895,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002303_1"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TOLtpp" sboTerm="SBO:0000185" id="R_TOLtpp" name="Toluene transport via diffusion" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TOLtpp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12814"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12815"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_tol_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_tol_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_TPI" sboTerm="SBO:0000176" id="R_TPI" name="Triose-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133941,6 +144076,46 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_TYRL" sboTerm="SBO:0000176" id="R_TYRL" name="Tyrosine lyase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_TYRL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/26364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.19"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104993"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_tyr__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4crsol_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dad_5_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_dhgly_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011000076_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TYRTA" sboTerm="SBO:0000176" id="R_TYRTA" name="Tyrosine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134286,6 +144461,51 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002755_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UAG2EMA" sboTerm="SBO:0000176" id="R_UAG2EMA" name="UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UAG2EMA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30685"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.14"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-4085021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00414"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00292"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_uacgam_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acmana_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_udp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_UAG4Ei" sboTerm="SBO:0000176" id="R_UAG4Ei" name="UDP-N-acetylglucosamine 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134648,35 +144868,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_UDPACGLP" sboTerm="SBO:0000176" id="R_UDPACGLP" name="UDP N acetylglucosamine diphosphorylase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_UDPACGLP">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.23"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105047"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09486"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_acgam1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_utp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_udpacgal_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_UDPG4E" sboTerm="SBO:0000176" id="R_UDPG4E" name="UDPglucose 4-epimerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -135010,6 +145201,39 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_UMPtex" sboTerm="SBO:0000185" id="R_UMPtex" name="UMP transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_UMPtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27928"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27929"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09361"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09808"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_ump_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ump_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_UNK3" sboTerm="SBO:0000176" id="R_UNK3" name="2-keto-4-methylthiobutyrate transamination" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -135935,6 +146159,61 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_VACOAI" sboTerm="SBO:0000176" id="R_VACOAI" name="Vinylacetyl-CoA Delta-isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_VACOAI">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10572"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.3.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:VINYLACETYL-COA-DELTA-ISOMERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105181"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03031"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02171"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_vaccoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_b2coa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_VACOAI_2" sboTerm="SBO:0000176" id="R_VACOAI_2" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_VACOAI_2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_vaccoa_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ctncoa_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_VALTA" sboTerm="SBO:0000176" id="R_VALTA" name="Valine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136547,6 +146826,39 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_X5PL3E" sboTerm="SBO:0000176" id="R_X5PL3E" name="L-xylulose 5-phosphate 3-epimerase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_X5PL3E">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18498"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/18500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.-.-.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.22"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LXULRU5P-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn02321"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_xu5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_ru5p__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_XAND" sboTerm="SBO:0000176" id="R_XAND" name="Xanthine dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136738,6 +147050,34 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002463_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_XTSNtex" sboTerm="SBO:0000185" id="R_XTSNtex" name="Xanthosine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XTSNtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09382"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_xtsn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_xtsn_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_WP_011001034_1"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_XYLK" sboTerm="SBO:0000176" id="R_XYLK" name="Xylulokinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136792,6 +147132,47 @@
           <fbc:geneProductRef fbc:geneProduct="G_WP_011002059_1"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_XYLabc" sboTerm="SBO:0000185" id="R_XYLabc" name="D-xylose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XYLabc">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29899#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29900#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29901#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29902#1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09383"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xyl__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xyl__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011001822_1"/>
+            <fbc:geneProductRef fbc:geneProduct="G_WP_011002102_1"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_XYLabcpp" sboTerm="SBO:0000185" id="R_XYLabcpp" name="D-xylose transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137513,6 +147894,16 @@
           <speciesReference species="M_14glucan_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_15dap_e" sboTerm="SBO:0000627" id="R_EX_15dap_e" name="R_EX_15dap_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_15dap_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_23camp_e" sboTerm="SBO:0000627" id="R_EX_23camp_e" name="R_EX_23camp_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137583,6 +147974,16 @@
           <speciesReference species="M_2m35mdntha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_2pglyc_e" sboTerm="SBO:0000627" id="R_EX_2pglyc_e" name="R_EX_2pglyc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_2pglyc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_34dhbz_e" sboTerm="SBO:0000627" id="R_EX_34dhbz_e" name="R_EX_34dhbz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137713,6 +148114,16 @@
           <speciesReference species="M_4abut_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_4crsol_e" sboTerm="SBO:0000627" id="R_EX_4crsol_e" name="R_EX_4crsol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4crsol_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_4hba_e" sboTerm="SBO:0000627" id="R_EX_4hba_e" name="R_EX_4hba_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137723,6 +148134,16 @@
           <speciesReference species="M_4hba_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_4hbald_e" sboTerm="SBO:0000627" id="R_EX_4hbald_e" name="R_EX_4hbald_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4hbald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_4hbz_e" sboTerm="SBO:0000627" id="R_EX_4hbz_e" name="R_EX_4hbz_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137763,6 +148184,16 @@
           <speciesReference species="M_4hpro_LT_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_4oxptn_e" sboTerm="SBO:0000627" id="R_EX_4oxptn_e" name="R_EX_4oxptn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_4oxptn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_5drib_e" sboTerm="SBO:0000627" id="R_EX_5drib_e" name="R_EX_5drib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137793,54 +148224,54 @@
           <speciesReference species="M_6atha_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_LalaDgluMdapDala_e" sboTerm="SBO:0000627" id="R_EX_LalaDgluMdapDala_e" name="R_EX_LalaDgluMdapDala_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_6hnac_e" sboTerm="SBO:0000627" id="R_EX_6hnac_e" name="R_EX_6hnac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_LalaDgluMdapDala_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_6hnac_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_LalaDgluMdap_e" sboTerm="SBO:0000627" id="R_EX_LalaDgluMdap_e" name="R_EX_LalaDgluMdap_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_LalaDgluMdapDala_e" sboTerm="SBO:0000627" id="R_EX_LalaDgluMdapDala_e" name="R_EX_LalaDgluMdapDala_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_LalaDgluMdap_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_LalaDgluMdapDala_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_LalaLglu_e" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e" name="R_EX_LalaLglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_LalaDgluMdap_e" sboTerm="SBO:0000627" id="R_EX_LalaDgluMdap_e" name="R_EX_LalaDgluMdap_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_LalaDgluMdap_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_Lcyst_e" sboTerm="SBO:0000627" id="R_EX_Lcyst_e" name="R_EX_Lcyst_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_LalaLglu_e" sboTerm="SBO:0000627" id="R_EX_LalaLglu_e" name="R_EX_LalaLglu_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_LalaLglu_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_R_3hdcaa_e" sboTerm="SBO:0000627" id="R_EX_R_3hdcaa_e" name="R_EX_R_3hdcaa_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_Lcyst_e" sboTerm="SBO:0000627" id="R_EX_Lcyst_e" name="R_EX_Lcyst_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_R_3hdcaa_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_Lcyst_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_T4hcinnm_e" sboTerm="SBO:0000627" id="R_EX_T4hcinnm_e" name="R_EX_T4hcinnm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -137883,6 +148314,26 @@
           <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_acgal1p_e" sboTerm="SBO:0000627" id="R_EX_acgal1p_e" name="R_EX_acgal1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_acgal1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_acgam1p_e" sboTerm="SBO:0000627" id="R_EX_acgam1p_e" name="R_EX_acgam1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_acgam1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_acgam_e" sboTerm="SBO:0000627" id="R_EX_acgam_e" name="R_EX_acgam_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137953,6 +148404,16 @@
           <speciesReference species="M_ade_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_adn_e" sboTerm="SBO:0000627" id="R_EX_adn_e" name="R_EX_adn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_adn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_agm_e" sboTerm="SBO:0000627" id="R_EX_agm_e" name="R_EX_agm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138123,44 +148584,44 @@
           <speciesReference species="M_arg__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_asn__L_e" sboTerm="SBO:0000627" id="R_EX_asn__L_e" name="R_EX_asn__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_ascb__L_e" sboTerm="SBO:0000627" id="R_EX_ascb__L_e" name="R_EX_ascb__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ascb__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_aso3_e" sboTerm="SBO:0000627" id="R_EX_aso3_e" name="R_EX_aso3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_asn__L_e" sboTerm="SBO:0000627" id="R_EX_asn__L_e" name="R_EX_asn__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_asn__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_aso4_e" sboTerm="SBO:0000627" id="R_EX_aso4_e" name="R_EX_aso4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_aso3_e" sboTerm="SBO:0000627" id="R_EX_aso3_e" name="R_EX_aso3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_aso3_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_asp__D_e" sboTerm="SBO:0000627" id="R_EX_asp__D_e" name="R_EX_asp__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_aso4_e" sboTerm="SBO:0000627" id="R_EX_aso4_e" name="R_EX_aso4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_asp__D_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_aso4_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_asp__L_e" sboTerm="SBO:0000627" id="R_EX_asp__L_e" name="R_EX_asp__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -138293,6 +148754,46 @@
           <speciesReference species="M_chol_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_chols_e" sboTerm="SBO:0000627" id="R_EX_chols_e" name="R_EX_chols_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_chols_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_chsterol_e" sboTerm="SBO:0000627" id="R_EX_chsterol_e" name="R_EX_chsterol_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_chsterol_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_chtbs_e" sboTerm="SBO:0000627" id="R_EX_chtbs_e" name="R_EX_chtbs_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_chtbs_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_cinnm_e" sboTerm="SBO:0000627" id="R_EX_cinnm_e" name="R_EX_cinnm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cinnm_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cit_e" sboTerm="SBO:0000627" id="R_EX_cit_e" name="R_EX_cit_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138313,6 +148814,16 @@
           <speciesReference species="M_cl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_cmcbtt_e" sboTerm="SBO:0000627" id="R_EX_cmcbtt_e" name="R_EX_cmcbtt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cmcbtt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_co2_e" sboTerm="SBO:0000627" id="R_EX_co2_e" name="R_EX_co2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138353,6 +148864,16 @@
           <speciesReference species="M_confrl_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_creat_e" sboTerm="SBO:0000627" id="R_EX_creat_e" name="R_EX_creat_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_creat_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_crn_e" sboTerm="SBO:0000627" id="R_EX_crn_e" name="R_EX_crn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138413,6 +148934,16 @@
           <speciesReference species="M_cys__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_cyst__L_e" sboTerm="SBO:0000627" id="R_EX_cyst__L_e" name="R_EX_cyst__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_cyst__L_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_cytd_e" sboTerm="SBO:0000627" id="R_EX_cytd_e" name="R_EX_cytd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138443,6 +148974,36 @@
           <speciesReference species="M_dca_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_dgsn_e" sboTerm="SBO:0000627" id="R_EX_dgsn_e" name="R_EX_dgsn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_dgsn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_dha_e" sboTerm="SBO:0000627" id="R_EX_dha_e" name="R_EX_dha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_dha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_din_e" sboTerm="SBO:0000627" id="R_EX_din_e" name="R_EX_din_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_din_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_dms_e" sboTerm="SBO:0000627" id="R_EX_dms_e" name="R_EX_dms_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138473,6 +149034,16 @@
           <speciesReference species="M_dmso_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_dopa_e" sboTerm="SBO:0000627" id="R_EX_dopa_e" name="R_EX_dopa_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_dopa_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_drib_e" sboTerm="SBO:0000627" id="R_EX_drib_e" name="R_EX_drib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138483,6 +149054,16 @@
           <speciesReference species="M_drib_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_dxyl_e" sboTerm="SBO:0000627" id="R_EX_dxyl_e" name="R_EX_dxyl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_dxyl_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_enter_e" sboTerm="SBO:0000627" id="R_EX_enter_e" name="R_EX_enter_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138493,6 +149074,16 @@
           <speciesReference species="M_enter_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_etha_e" sboTerm="SBO:0000627" id="R_EX_etha_e" name="R_EX_etha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_etha_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ethso3_e" sboTerm="SBO:0000627" id="R_EX_ethso3_e" name="R_EX_ethso3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138523,6 +149114,16 @@
           <speciesReference species="M_fald_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_fcmcbtt_e" sboTerm="SBO:0000627" id="R_EX_fcmcbtt_e" name="R_EX_fcmcbtt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_fcmcbtt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_fe2_e" sboTerm="SBO:0000627" id="R_EX_fe2_e" name="R_EX_fe2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138553,6 +149154,16 @@
           <speciesReference species="M_fe3dcit_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_fe3pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_fe3pyovd_kt_e" name="R_EX_fe3pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_feenter_e" sboTerm="SBO:0000627" id="R_EX_feenter_e" name="R_EX_feenter_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138613,6 +149224,16 @@
           <speciesReference species="M_fum_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_g1p_e" sboTerm="SBO:0000627" id="R_EX_g1p_e" name="R_EX_g1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_g1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_g3pc_e" sboTerm="SBO:0000627" id="R_EX_g3pc_e" name="R_EX_g3pc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138663,6 +149284,26 @@
           <speciesReference species="M_g3ps_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_gal1p_e" sboTerm="SBO:0000627" id="R_EX_gal1p_e" name="R_EX_gal1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_gal1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_gal_bD_e" sboTerm="SBO:0000627" id="R_EX_gal_bD_e" name="R_EX_gal_bD_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_gal_bD_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_gal_e" sboTerm="SBO:0000627" id="R_EX_gal_e" name="R_EX_gal_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138763,6 +149404,16 @@
           <speciesReference species="M_glcr_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_glcur1p_e" sboTerm="SBO:0000627" id="R_EX_glcur1p_e" name="R_EX_glcur1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_glcur1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_glcur_e" sboTerm="SBO:0000627" id="R_EX_glcur_e" name="R_EX_glcur_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139053,6 +149704,16 @@
           <speciesReference species="M_h_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_hco3_e" sboTerm="SBO:0000627" id="R_EX_hco3_e" name="R_EX_hco3_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_hco3_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_hexs_e" sboTerm="SBO:0000627" id="R_EX_hexs_e" name="R_EX_hexs_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139063,6 +149724,16 @@
           <speciesReference species="M_hexs_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_hia_e" sboTerm="SBO:0000627" id="R_EX_hia_e" name="R_EX_hia_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_hia_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_his__L_e" sboTerm="SBO:0000627" id="R_EX_his__L_e" name="R_EX_his__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139303,6 +149974,16 @@
           <speciesReference species="M_lnlc_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_lys__D_e" sboTerm="SBO:0000627" id="R_EX_lys__D_e" name="R_EX_lys__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_lys__D_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_lys__L_e" sboTerm="SBO:0000627" id="R_EX_lys__L_e" name="R_EX_lys__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139413,6 +150094,16 @@
           <speciesReference species="M_man_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_manglyc_e" sboTerm="SBO:0000627" id="R_EX_manglyc_e" name="R_EX_manglyc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_manglyc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_melib_e" sboTerm="SBO:0000627" id="R_EX_melib_e" name="R_EX_melib_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139423,6 +150114,16 @@
           <speciesReference species="M_melib_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_meoh_e" sboTerm="SBO:0000627" id="R_EX_meoh_e" name="R_EX_meoh_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_meoh_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_met_L_ala__L_e" sboTerm="SBO:0000627" id="R_EX_met_L_ala__L_e" name="R_EX_met_L_ala__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139453,24 +150154,24 @@
           <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_metsox_R__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_R__L_e" name="R_EX_metsox_R__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_metox__R_e" sboTerm="SBO:0000627" id="R_EX_metox__R_e" name="R_EX_metox__R_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox__R_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_metsox_S__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_S__L_e" name="R_EX_metsox_S__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_metox_e" sboTerm="SBO:0000627" id="R_EX_metox_e" name="R_EX_metox_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_metox_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_mg2_e" sboTerm="SBO:0000627" id="R_EX_mg2_e" name="R_EX_mg2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -139493,6 +150194,16 @@
           <speciesReference species="M_mn2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_mnl1p_e" sboTerm="SBO:0000627" id="R_EX_mnl1p_e" name="R_EX_mnl1p_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_mnl1p_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_mnl_e" sboTerm="SBO:0000627" id="R_EX_mnl_e" name="R_EX_mnl_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139523,6 +150234,16 @@
           <speciesReference species="M_mso3_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_mththf_e" sboTerm="SBO:0000627" id="R_EX_mththf_e" name="R_EX_mththf_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_mththf_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_n2o_e" sboTerm="SBO:0000627" id="R_EX_n2o_e" name="R_EX_n2o_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139773,6 +150494,16 @@
           <speciesReference species="M_ppa_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ppal_e" sboTerm="SBO:0000627" id="R_EX_ppal_e" name="R_EX_ppal_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ppal_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ppi_e" sboTerm="SBO:0000627" id="R_EX_ppi_e" name="R_EX_ppi_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139843,34 +150574,34 @@
           <speciesReference species="M_ptsla_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_pyovd_kt_e" name="R_EX_pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_pydxn_e" sboTerm="SBO:0000627" id="R_EX_pydxn_e" name="R_EX_pydxn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pydxn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_pyr_e" sboTerm="SBO:0000627" id="R_EX_pyr_e" name="R_EX_pyr_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_pyovd_kt_e" sboTerm="SBO:0000627" id="R_EX_pyovd_kt_e" name="R_EX_pyovd_kt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_quin_e" sboTerm="SBO:0000627" id="R_EX_quin_e" name="R_EX_quin_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_EX_pyr_e" sboTerm="SBO:0000627" id="R_EX_pyr_e" name="R_EX_pyr_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000627</p>
           </html>
         </notes>
         <listOfReactants>
-          <speciesReference species="M_quin_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
       <reaction metaid="R_EX_raffin_e" sboTerm="SBO:0000627" id="R_EX_raffin_e" name="R_EX_raffin_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -139903,6 +150634,26 @@
           <speciesReference species="M_rmn_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_s_e" sboTerm="SBO:0000627" id="R_EX_s_e" name="R_EX_s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
+      <reaction metaid="R_EX_salc_e" sboTerm="SBO:0000627" id="R_EX_salc_e" name="R_EX_salc_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_salc_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_salchs4_e" sboTerm="SBO:0000627" id="R_EX_salchs4_e" name="R_EX_salchs4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140103,6 +150854,16 @@
           <speciesReference species="M_tcynt_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_tet_e" sboTerm="SBO:0000627" id="R_EX_tet_e" name="R_EX_tet_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_tet_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_thm_e" sboTerm="SBO:0000627" id="R_EX_thm_e" name="R_EX_thm_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140133,6 +150894,16 @@
           <speciesReference species="M_thym_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_thymd_e" sboTerm="SBO:0000627" id="R_EX_thymd_e" name="R_EX_thymd_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_thymd_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_tma_e" sboTerm="SBO:0000627" id="R_EX_tma_e" name="R_EX_tma_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140233,6 +151004,16 @@
           <speciesReference species="M_tyr__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_ump_e" sboTerm="SBO:0000627" id="R_EX_ump_e" name="R_EX_ump_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_ump_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_ura_e" sboTerm="SBO:0000627" id="R_EX_ura_e" name="R_EX_ura_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140303,6 +151084,16 @@
           <speciesReference species="M_xan_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_xtsn_e" sboTerm="SBO:0000627" id="R_EX_xtsn_e" name="R_EX_xtsn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_xtsn_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_xyl__D_e" sboTerm="SBO:0000627" id="R_EX_xyl__D_e" name="R_EX_xyl__D_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140453,37 +151244,6 @@
           <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_O2t" sboTerm="SBO:0000185" id="R_O2t" name="O2 transport  diffusion " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-            <p>GAP_FILL: M9</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2t">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05468"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09031"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09734"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PHPYROX" sboTerm="SBO:0000176" id="R_PHPYROX" name="Phenylpyruvate oxidation chemical " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140547,6 +151307,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_spontaneous" sboTerm="SBO:0000243" fbc:id="G_spontaneous" fbc:name="G_spontaneous" fbc:label="G_spontaneous">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011001034_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001034_1" fbc:name="G_WP_011001034_1" fbc:label="G_WP_011001034_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140631,6 +151398,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011004345_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004345_1" fbc:name="G_WP_011004345_1" fbc:label="G_WP_011004345_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011001364_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001364_1" fbc:name="G_WP_011001364_1" fbc:label="G_WP_011001364_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140687,21 +151461,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002421_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002421_1" fbc:name="G_WP_011002421_1" fbc:label="G_WP_011002421_1">
+      <fbc:geneProduct metaid="G_WP_011001004_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001004_1" fbc:name="G_WP_011001004_1" fbc:label="G_WP_011001004_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001004_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001004_1" fbc:name="G_WP_011001004_1" fbc:label="G_WP_011001004_1">
+      <fbc:geneProduct metaid="G_WP_011001575_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001575_1" fbc:name="G_WP_011001575_1" fbc:label="G_WP_011001575_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001575_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001575_1" fbc:name="G_WP_011001575_1" fbc:label="G_WP_011001575_1">
+      <fbc:geneProduct metaid="G_WP_011002421_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002421_1" fbc:name="G_WP_011002421_1" fbc:label="G_WP_011002421_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140736,28 +151510,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001126_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001126_1" fbc:name="G_WP_011001126_1" fbc:label="G_WP_011001126_1">
+      <fbc:geneProduct metaid="G_WP_011001822_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001822_1" fbc:name="G_WP_011001822_1" fbc:label="G_WP_011001822_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001822_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001822_1" fbc:name="G_WP_011001822_1" fbc:label="G_WP_011001822_1">
+      <fbc:geneProduct metaid="G_WP_011001125_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001125_1" fbc:name="G_WP_011001125_1" fbc:label="G_WP_011001125_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001125_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001125_1" fbc:name="G_WP_011001125_1" fbc:label="G_WP_011001125_1">
+      <fbc:geneProduct metaid="G_WP_011001123_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001123_1" fbc:name="G_WP_011001123_1" fbc:label="G_WP_011001123_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001123_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001123_1" fbc:name="G_WP_011001123_1" fbc:label="G_WP_011001123_1">
+      <fbc:geneProduct metaid="G_WP_011001126_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001126_1" fbc:name="G_WP_011001126_1" fbc:label="G_WP_011001126_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140855,6 +151629,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_016721757_1" sboTerm="SBO:0000243" fbc:id="G_WP_016721757_1" fbc:name="G_WP_016721757_1" fbc:label="G_WP_016721757_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011001401_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001401_1" fbc:name="G_WP_011001401_1" fbc:label="G_WP_011001401_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140897,6 +151678,20 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011000504_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000504_1" fbc:name="G_WP_011000504_1" fbc:label="G_WP_011000504_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011002275_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002275_1" fbc:name="G_WP_011002275_1" fbc:label="G_WP_011002275_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_016724265_1" sboTerm="SBO:0000243" fbc:id="G_WP_016724265_1" fbc:name="G_WP_016724265_1" fbc:label="G_WP_016724265_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140960,14 +151755,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001579_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001579_1" fbc:name="G_WP_011001579_1" fbc:label="G_WP_011001579_1">
+      <fbc:geneProduct metaid="G_WP_011001574_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001574_1" fbc:name="G_WP_011001574_1" fbc:label="G_WP_011001574_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001574_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001574_1" fbc:name="G_WP_011001574_1" fbc:label="G_WP_011001574_1">
+      <fbc:geneProduct metaid="G_WP_011001699_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001699_1" fbc:name="G_WP_011001699_1" fbc:label="G_WP_011001699_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140981,7 +151776,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001699_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001699_1" fbc:name="G_WP_011001699_1" fbc:label="G_WP_011001699_1">
+      <fbc:geneProduct metaid="G_WP_011001579_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001579_1" fbc:name="G_WP_011001579_1" fbc:label="G_WP_011001579_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140995,21 +151790,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004233_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004233_1" fbc:name="G_WP_011004233_1" fbc:label="G_WP_011004233_1">
+      <fbc:geneProduct metaid="G_WP_011001916_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001916_1" fbc:name="G_WP_011001916_1" fbc:label="G_WP_011001916_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001119_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001119_1" fbc:name="G_WP_011001119_1" fbc:label="G_WP_011001119_1">
+      <fbc:geneProduct metaid="G_WP_011002693_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002693_1" fbc:name="G_WP_011002693_1" fbc:label="G_WP_011002693_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001916_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001916_1" fbc:name="G_WP_011001916_1" fbc:label="G_WP_011001916_1">
+      <fbc:geneProduct metaid="G_WP_011001119_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001119_1" fbc:name="G_WP_011001119_1" fbc:label="G_WP_011001119_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141030,7 +151825,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002693_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002693_1" fbc:name="G_WP_011002693_1" fbc:label="G_WP_011002693_1">
+      <fbc:geneProduct metaid="G_WP_011004233_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004233_1" fbc:name="G_WP_011004233_1" fbc:label="G_WP_011004233_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141044,14 +151839,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000311_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000311_1" fbc:name="G_WP_011000311_1" fbc:label="G_WP_011000311_1">
+      <fbc:geneProduct metaid="G_WP_011000312_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000312_1" fbc:name="G_WP_011000312_1" fbc:label="G_WP_011000312_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000312_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000312_1" fbc:name="G_WP_011000312_1" fbc:label="G_WP_011000312_1">
+      <fbc:geneProduct metaid="G_WP_011000311_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000311_1" fbc:name="G_WP_011000311_1" fbc:label="G_WP_011000311_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141065,28 +151860,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003455_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003455_1" fbc:name="G_WP_011003455_1" fbc:label="G_WP_011003455_1">
+      <fbc:geneProduct metaid="G_WP_011002739_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002739_1" fbc:name="G_WP_011002739_1" fbc:label="G_WP_011002739_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028860477_1" sboTerm="SBO:0000243" fbc:id="G_WP_028860477_1" fbc:name="G_WP_028860477_1" fbc:label="G_WP_028860477_1">
+      <fbc:geneProduct metaid="G_WP_011003455_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003455_1" fbc:name="G_WP_011003455_1" fbc:label="G_WP_011003455_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002739_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002739_1" fbc:name="G_WP_011002739_1" fbc:label="G_WP_011002739_1">
+      <fbc:geneProduct metaid="G_WP_028860477_1" sboTerm="SBO:0000243" fbc:id="G_WP_028860477_1" fbc:name="G_WP_028860477_1" fbc:label="G_WP_028860477_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002008_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002008_1" fbc:name="G_WP_011002008_1" fbc:label="G_WP_011002008_1">
+      <fbc:geneProduct metaid="G_WP_003261911_1" sboTerm="SBO:0000243" fbc:id="G_WP_003261911_1" fbc:name="G_WP_003261911_1" fbc:label="G_WP_003261911_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141100,7 +151895,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_003261911_1" sboTerm="SBO:0000243" fbc:id="G_WP_003261911_1" fbc:name="G_WP_003261911_1" fbc:label="G_WP_003261911_1">
+      <fbc:geneProduct metaid="G_WP_011002008_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002008_1" fbc:name="G_WP_011002008_1" fbc:label="G_WP_011002008_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141156,14 +151951,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001979_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001979_1" fbc:name="G_WP_011001979_1" fbc:label="G_WP_011001979_1">
+      <fbc:geneProduct metaid="G_WP_011001700_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001700_1" fbc:name="G_WP_011001700_1" fbc:label="G_WP_011001700_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001700_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001700_1" fbc:name="G_WP_011001700_1" fbc:label="G_WP_011001700_1">
+      <fbc:geneProduct metaid="G_WP_011001979_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001979_1" fbc:name="G_WP_011001979_1" fbc:label="G_WP_011001979_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141184,7 +151979,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002777_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002777_1" fbc:name="G_WP_011002777_1" fbc:label="G_WP_011002777_1">
+      <fbc:geneProduct metaid="G_WP_011003158_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003158_1" fbc:name="G_WP_011003158_1" fbc:label="G_WP_011003158_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141198,14 +151993,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001583_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001583_1" fbc:name="G_WP_011001583_1" fbc:label="G_WP_011001583_1">
+      <fbc:geneProduct metaid="G_WP_011002777_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002777_1" fbc:name="G_WP_011002777_1" fbc:label="G_WP_011002777_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003158_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003158_1" fbc:name="G_WP_011003158_1" fbc:label="G_WP_011003158_1">
+      <fbc:geneProduct metaid="G_WP_011001583_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001583_1" fbc:name="G_WP_011001583_1" fbc:label="G_WP_011001583_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141226,14 +152021,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003642_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003642_1" fbc:name="G_WP_011003642_1" fbc:label="G_WP_011003642_1">
+      <fbc:geneProduct metaid="G_WP_011003644_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003644_1" fbc:name="G_WP_011003644_1" fbc:label="G_WP_011003644_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003644_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003644_1" fbc:name="G_WP_011003644_1" fbc:label="G_WP_011003644_1">
+      <fbc:geneProduct metaid="G_WP_011003437_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003437_1" fbc:name="G_WP_011003437_1" fbc:label="G_WP_011003437_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141247,7 +152042,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003437_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003437_1" fbc:name="G_WP_011003437_1" fbc:label="G_WP_011003437_1">
+      <fbc:geneProduct metaid="G_WP_011003642_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003642_1" fbc:name="G_WP_011003642_1" fbc:label="G_WP_011003642_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141324,21 +152119,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_019717202_1" sboTerm="SBO:0000243" fbc:id="G_WP_019717202_1" fbc:name="G_WP_019717202_1" fbc:label="G_WP_019717202_1">
+      <fbc:geneProduct metaid="G_WP_086004968_1" sboTerm="SBO:0000243" fbc:id="G_WP_086004968_1" fbc:name="G_WP_086004968_1" fbc:label="G_WP_086004968_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_086004968_1" sboTerm="SBO:0000243" fbc:id="G_WP_086004968_1" fbc:name="G_WP_086004968_1" fbc:label="G_WP_086004968_1">
+      <fbc:geneProduct metaid="G_WP_011000478_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000478_1" fbc:name="G_WP_011000478_1" fbc:label="G_WP_011000478_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000478_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000478_1" fbc:name="G_WP_011000478_1" fbc:label="G_WP_011000478_1">
+      <fbc:geneProduct metaid="G_WP_019717202_1" sboTerm="SBO:0000243" fbc:id="G_WP_019717202_1" fbc:name="G_WP_019717202_1" fbc:label="G_WP_019717202_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141352,14 +152147,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002274_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002274_1" fbc:name="G_WP_011002274_1" fbc:label="G_WP_011002274_1">
+      <fbc:geneProduct metaid="G_WP_021155724_1" sboTerm="SBO:0000243" fbc:id="G_WP_021155724_1" fbc:name="G_WP_021155724_1" fbc:label="G_WP_021155724_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_021155724_1" sboTerm="SBO:0000243" fbc:id="G_WP_021155724_1" fbc:name="G_WP_021155724_1" fbc:label="G_WP_021155724_1">
+      <fbc:geneProduct metaid="G_WP_011002274_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002274_1" fbc:name="G_WP_011002274_1" fbc:label="G_WP_011002274_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141373,14 +152168,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001779_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001779_1" fbc:name="G_WP_011001779_1" fbc:label="G_WP_011001779_1">
+      <fbc:geneProduct metaid="G_WP_011000097_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000097_1" fbc:name="G_WP_011000097_1" fbc:label="G_WP_011000097_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000097_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000097_1" fbc:name="G_WP_011000097_1" fbc:label="G_WP_011000097_1">
+      <fbc:geneProduct metaid="G_WP_011001779_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001779_1" fbc:name="G_WP_011001779_1" fbc:label="G_WP_011001779_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141436,14 +152231,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002316_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002316_1" fbc:name="G_WP_011002316_1" fbc:label="G_WP_011002316_1">
+      <fbc:geneProduct metaid="G_WP_011002315_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002315_1" fbc:name="G_WP_011002315_1" fbc:label="G_WP_011002315_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002315_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002315_1" fbc:name="G_WP_011002315_1" fbc:label="G_WP_011002315_1">
+      <fbc:geneProduct metaid="G_WP_011002316_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002316_1" fbc:name="G_WP_011002316_1" fbc:label="G_WP_011002316_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141555,14 +152350,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000733_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000733_1" fbc:name="G_WP_011000733_1" fbc:label="G_WP_011000733_1">
+      <fbc:geneProduct metaid="G_WP_011001138_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001138_1" fbc:name="G_WP_011001138_1" fbc:label="G_WP_011001138_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001138_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001138_1" fbc:name="G_WP_011001138_1" fbc:label="G_WP_011001138_1">
+      <fbc:geneProduct metaid="G_WP_011000733_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000733_1" fbc:name="G_WP_011000733_1" fbc:label="G_WP_011000733_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141604,14 +152399,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_020832026_1" sboTerm="SBO:0000243" fbc:id="G_WP_020832026_1" fbc:name="G_WP_020832026_1" fbc:label="G_WP_020832026_1">
+      <fbc:geneProduct metaid="G_WP_011002454_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002454_1" fbc:name="G_WP_011002454_1" fbc:label="G_WP_011002454_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002454_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002454_1" fbc:name="G_WP_011002454_1" fbc:label="G_WP_011002454_1">
+      <fbc:geneProduct metaid="G_WP_020832026_1" sboTerm="SBO:0000243" fbc:id="G_WP_020832026_1" fbc:name="G_WP_020832026_1" fbc:label="G_WP_020832026_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141639,14 +152434,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004696_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004696_1" fbc:name="G_WP_011004696_1" fbc:label="G_WP_011004696_1">
+      <fbc:geneProduct metaid="G_WP_011000530_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000530_1" fbc:name="G_WP_011000530_1" fbc:label="G_WP_011000530_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000530_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000530_1" fbc:name="G_WP_011000530_1" fbc:label="G_WP_011000530_1">
+      <fbc:geneProduct metaid="G_WP_011004696_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004696_1" fbc:name="G_WP_011004696_1" fbc:label="G_WP_011004696_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141660,6 +152455,34 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011004219_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004219_1" fbc:name="G_WP_011004219_1" fbc:label="G_WP_011004219_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011004403_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004403_1" fbc:name="G_WP_011004403_1" fbc:label="G_WP_011004403_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011004220_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004220_1" fbc:name="G_WP_011004220_1" fbc:label="G_WP_011004220_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011004221_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004221_1" fbc:name="G_WP_011004221_1" fbc:label="G_WP_011004221_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011000060_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000060_1" fbc:name="G_WP_011000060_1" fbc:label="G_WP_011000060_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141681,14 +152504,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876989_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876989_1" fbc:name="G_WP_043876989_1" fbc:label="G_WP_043876989_1">
+      <fbc:geneProduct metaid="G_WP_011001507_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001507_1" fbc:name="G_WP_011001507_1" fbc:label="G_WP_011001507_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001507_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001507_1" fbc:name="G_WP_011001507_1" fbc:label="G_WP_011001507_1">
+      <fbc:geneProduct metaid="G_WP_043876989_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876989_1" fbc:name="G_WP_043876989_1" fbc:label="G_WP_043876989_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141723,7 +152546,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001219_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001219_1" fbc:name="G_WP_011001219_1" fbc:label="G_WP_011001219_1">
+      <fbc:geneProduct metaid="G_WP_011001218_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001218_1" fbc:name="G_WP_011001218_1" fbc:label="G_WP_011001218_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141737,14 +152560,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001218_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001218_1" fbc:name="G_WP_011001218_1" fbc:label="G_WP_011001218_1">
+      <fbc:geneProduct metaid="G_WP_011001220_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001220_1" fbc:name="G_WP_011001220_1" fbc:label="G_WP_011001220_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001220_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001220_1" fbc:name="G_WP_011001220_1" fbc:label="G_WP_011001220_1">
+      <fbc:geneProduct metaid="G_WP_011001219_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001219_1" fbc:name="G_WP_011001219_1" fbc:label="G_WP_011001219_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141758,7 +152581,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002772_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002772_1" fbc:name="G_WP_011002772_1" fbc:label="G_WP_011002772_1">
+      <fbc:geneProduct metaid="G_WP_011001820_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001820_1" fbc:name="G_WP_011001820_1" fbc:label="G_WP_011001820_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141772,35 +152595,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001819_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001819_1" fbc:name="G_WP_011001819_1" fbc:label="G_WP_011001819_1">
+      <fbc:geneProduct metaid="G_WP_011001823_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001823_1" fbc:name="G_WP_011001823_1" fbc:label="G_WP_011001823_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001820_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001820_1" fbc:name="G_WP_011001820_1" fbc:label="G_WP_011001820_1">
+      <fbc:geneProduct metaid="G_WP_011002775_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002775_1" fbc:name="G_WP_011002775_1" fbc:label="G_WP_011002775_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002776_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002776_1" fbc:name="G_WP_011002776_1" fbc:label="G_WP_011002776_1">
+      <fbc:geneProduct metaid="G_WP_011001819_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001819_1" fbc:name="G_WP_011001819_1" fbc:label="G_WP_011001819_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001823_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001823_1" fbc:name="G_WP_011001823_1" fbc:label="G_WP_011001823_1">
+      <fbc:geneProduct metaid="G_WP_011002776_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002776_1" fbc:name="G_WP_011002776_1" fbc:label="G_WP_011002776_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002775_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002775_1" fbc:name="G_WP_011002775_1" fbc:label="G_WP_011002775_1">
+      <fbc:geneProduct metaid="G_WP_011002772_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002772_1" fbc:name="G_WP_011002772_1" fbc:label="G_WP_011002772_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141814,14 +152637,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002616_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002616_1" fbc:name="G_WP_011002616_1" fbc:label="G_WP_011002616_1">
+      <fbc:geneProduct metaid="G_WP_011001320_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001320_1" fbc:name="G_WP_011001320_1" fbc:label="G_WP_011001320_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001320_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001320_1" fbc:name="G_WP_011001320_1" fbc:label="G_WP_011001320_1">
+      <fbc:geneProduct metaid="G_WP_011002616_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002616_1" fbc:name="G_WP_011002616_1" fbc:label="G_WP_011002616_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141863,28 +152686,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003785_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003785_1" fbc:name="G_WP_011003785_1" fbc:label="G_WP_011003785_1">
+      <fbc:geneProduct metaid="G_WP_021155331_1" sboTerm="SBO:0000243" fbc:id="G_WP_021155331_1" fbc:name="G_WP_021155331_1" fbc:label="G_WP_021155331_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003337_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003337_1" fbc:name="G_WP_011003337_1" fbc:label="G_WP_011003337_1">
+      <fbc:geneProduct metaid="G_WP_011002359_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002359_1" fbc:name="G_WP_011002359_1" fbc:label="G_WP_011002359_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_021155331_1" sboTerm="SBO:0000243" fbc:id="G_WP_021155331_1" fbc:name="G_WP_021155331_1" fbc:label="G_WP_021155331_1">
+      <fbc:geneProduct metaid="G_WP_011003336_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003336_1" fbc:name="G_WP_011003336_1" fbc:label="G_WP_011003336_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003288_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003288_1" fbc:name="G_WP_011003288_1" fbc:label="G_WP_011003288_1">
+      <fbc:geneProduct metaid="G_WP_011003337_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003337_1" fbc:name="G_WP_011003337_1" fbc:label="G_WP_011003337_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141898,35 +152721,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003336_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003336_1" fbc:name="G_WP_011003336_1" fbc:label="G_WP_011003336_1">
+      <fbc:geneProduct metaid="G_WP_011003785_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003785_1" fbc:name="G_WP_011003785_1" fbc:label="G_WP_011003785_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002359_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002359_1" fbc:name="G_WP_011002359_1" fbc:label="G_WP_011002359_1">
+      <fbc:geneProduct metaid="G_WP_011003288_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003288_1" fbc:name="G_WP_011003288_1" fbc:label="G_WP_011003288_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004838_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004838_1" fbc:name="G_WP_011004838_1" fbc:label="G_WP_011004838_1">
+      <fbc:geneProduct metaid="G_WP_011003227_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003227_1" fbc:name="G_WP_011003227_1" fbc:label="G_WP_011003227_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001692_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001692_1" fbc:name="G_WP_011001692_1" fbc:label="G_WP_011001692_1">
+      <fbc:geneProduct metaid="G_WP_016724145_1" sboTerm="SBO:0000243" fbc:id="G_WP_016724145_1" fbc:name="G_WP_016724145_1" fbc:label="G_WP_016724145_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003227_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003227_1" fbc:name="G_WP_011003227_1" fbc:label="G_WP_011003227_1">
+      <fbc:geneProduct metaid="G_WP_011002357_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002357_1" fbc:name="G_WP_011002357_1" fbc:label="G_WP_011002357_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141947,14 +152770,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016724145_1" sboTerm="SBO:0000243" fbc:id="G_WP_016724145_1" fbc:name="G_WP_016724145_1" fbc:label="G_WP_016724145_1">
+      <fbc:geneProduct metaid="G_WP_011001692_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001692_1" fbc:name="G_WP_011001692_1" fbc:label="G_WP_011001692_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002357_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002357_1" fbc:name="G_WP_011002357_1" fbc:label="G_WP_011002357_1">
+      <fbc:geneProduct metaid="G_WP_011004838_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004838_1" fbc:name="G_WP_011004838_1" fbc:label="G_WP_011004838_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141968,42 +152791,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003018_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003018_1" fbc:name="G_WP_011003018_1" fbc:label="G_WP_011003018_1">
+      <fbc:geneProduct metaid="G_WP_011003388_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003388_1" fbc:name="G_WP_011003388_1" fbc:label="G_WP_011003388_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003020_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003020_1" fbc:name="G_WP_011003020_1" fbc:label="G_WP_011003020_1">
+      <fbc:geneProduct metaid="G_WP_011000582_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000582_1" fbc:name="G_WP_011000582_1" fbc:label="G_WP_011000582_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003388_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003388_1" fbc:name="G_WP_011003388_1" fbc:label="G_WP_011003388_1">
+      <fbc:geneProduct metaid="G_WP_011003020_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003020_1" fbc:name="G_WP_011003020_1" fbc:label="G_WP_011003020_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000582_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000582_1" fbc:name="G_WP_011000582_1" fbc:label="G_WP_011000582_1">
+      <fbc:geneProduct metaid="G_WP_011003018_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003018_1" fbc:name="G_WP_011003018_1" fbc:label="G_WP_011003018_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003742_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003742_1" fbc:name="G_WP_011003742_1" fbc:label="G_WP_011003742_1">
+      <fbc:geneProduct metaid="G_WP_028860108_1" sboTerm="SBO:0000243" fbc:id="G_WP_028860108_1" fbc:name="G_WP_028860108_1" fbc:label="G_WP_028860108_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028860108_1" sboTerm="SBO:0000243" fbc:id="G_WP_028860108_1" fbc:name="G_WP_028860108_1" fbc:label="G_WP_028860108_1">
+      <fbc:geneProduct metaid="G_WP_011003742_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003742_1" fbc:name="G_WP_011003742_1" fbc:label="G_WP_011003742_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142052,7 +152875,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002474_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002474_1" fbc:name="G_WP_011002474_1" fbc:label="G_WP_011002474_1">
+      <fbc:geneProduct metaid="G_WP_011000065_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000065_1" fbc:name="G_WP_011000065_1" fbc:label="G_WP_011000065_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142066,7 +152889,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000065_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000065_1" fbc:name="G_WP_011000065_1" fbc:label="G_WP_011000065_1">
+      <fbc:geneProduct metaid="G_WP_011002474_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002474_1" fbc:name="G_WP_011002474_1" fbc:label="G_WP_011002474_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142094,14 +152917,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002099_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002099_1" fbc:name="G_WP_011002099_1" fbc:label="G_WP_011002099_1">
+      <fbc:geneProduct metaid="G_WP_011002100_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002100_1" fbc:name="G_WP_011002100_1" fbc:label="G_WP_011002100_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002100_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002100_1" fbc:name="G_WP_011002100_1" fbc:label="G_WP_011002100_1">
+      <fbc:geneProduct metaid="G_WP_011002099_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002099_1" fbc:name="G_WP_011002099_1" fbc:label="G_WP_011002099_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142115,21 +152938,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001707_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001707_1" fbc:name="G_WP_011001707_1" fbc:label="G_WP_011001707_1">
+      <fbc:geneProduct metaid="G_WP_043876575_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876575_1" fbc:name="G_WP_043876575_1" fbc:label="G_WP_043876575_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004721_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004721_1" fbc:name="G_WP_011004721_1" fbc:label="G_WP_011004721_1">
+      <fbc:geneProduct metaid="G_WP_011001707_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001707_1" fbc:name="G_WP_011001707_1" fbc:label="G_WP_011001707_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876575_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876575_1" fbc:name="G_WP_043876575_1" fbc:label="G_WP_043876575_1">
+      <fbc:geneProduct metaid="G_WP_011004721_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004721_1" fbc:name="G_WP_011004721_1" fbc:label="G_WP_011004721_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142213,14 +153036,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001352_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001352_1" fbc:name="G_WP_011001352_1" fbc:label="G_WP_011001352_1">
+      <fbc:geneProduct metaid="G_WP_011000971_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000971_1" fbc:name="G_WP_011000971_1" fbc:label="G_WP_011000971_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000971_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000971_1" fbc:name="G_WP_011000971_1" fbc:label="G_WP_011000971_1">
+      <fbc:geneProduct metaid="G_WP_011001352_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001352_1" fbc:name="G_WP_011001352_1" fbc:label="G_WP_011001352_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142262,14 +153085,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003799_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003799_1" fbc:name="G_WP_011003799_1" fbc:label="G_WP_011003799_1">
+      <fbc:geneProduct metaid="G_WP_011000636_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000636_1" fbc:name="G_WP_011000636_1" fbc:label="G_WP_011000636_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000636_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000636_1" fbc:name="G_WP_011000636_1" fbc:label="G_WP_011000636_1">
+      <fbc:geneProduct metaid="G_WP_011003799_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003799_1" fbc:name="G_WP_011003799_1" fbc:label="G_WP_011003799_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142290,7 +153113,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004345_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004345_1" fbc:name="G_WP_011004345_1" fbc:label="G_WP_011004345_1">
+      <fbc:geneProduct metaid="G_WP_011002867_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002867_1" fbc:name="G_WP_011002867_1" fbc:label="G_WP_011002867_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142311,13 +153134,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002867_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002867_1" fbc:name="G_WP_011002867_1" fbc:label="G_WP_011002867_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011004115_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004115_1" fbc:name="G_WP_011004115_1" fbc:label="G_WP_011004115_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142367,14 +153183,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002663_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002663_1" fbc:name="G_WP_011002663_1" fbc:label="G_WP_011002663_1">
+      <fbc:geneProduct metaid="G_WP_011002665_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002665_1" fbc:name="G_WP_011002665_1" fbc:label="G_WP_011002665_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002665_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002665_1" fbc:name="G_WP_011002665_1" fbc:label="G_WP_011002665_1">
+      <fbc:geneProduct metaid="G_WP_011002663_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002663_1" fbc:name="G_WP_011002663_1" fbc:label="G_WP_011002663_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142437,28 +153253,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004224_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004224_1" fbc:name="G_WP_011004224_1" fbc:label="G_WP_011004224_1">
+      <fbc:geneProduct metaid="G_WP_011002187_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002187_1" fbc:name="G_WP_011002187_1" fbc:label="G_WP_011002187_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002037_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002037_1" fbc:name="G_WP_011002037_1" fbc:label="G_WP_011002037_1">
+      <fbc:geneProduct metaid="G_WP_011003290_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003290_1" fbc:name="G_WP_011003290_1" fbc:label="G_WP_011003290_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003290_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003290_1" fbc:name="G_WP_011003290_1" fbc:label="G_WP_011003290_1">
+      <fbc:geneProduct metaid="G_WP_011004224_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004224_1" fbc:name="G_WP_011004224_1" fbc:label="G_WP_011004224_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002187_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002187_1" fbc:name="G_WP_011002187_1" fbc:label="G_WP_011002187_1">
+      <fbc:geneProduct metaid="G_WP_011002037_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002037_1" fbc:name="G_WP_011002037_1" fbc:label="G_WP_011002037_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142598,14 +153414,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000445_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000445_1" fbc:name="G_WP_011000445_1" fbc:label="G_WP_011000445_1">
+      <fbc:geneProduct metaid="G_WP_011004429_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004429_1" fbc:name="G_WP_011004429_1" fbc:label="G_WP_011004429_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004429_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004429_1" fbc:name="G_WP_011004429_1" fbc:label="G_WP_011004429_1">
+      <fbc:geneProduct metaid="G_WP_011000445_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000445_1" fbc:name="G_WP_011000445_1" fbc:label="G_WP_011000445_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142619,14 +153435,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000443_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000443_1" fbc:name="G_WP_011000443_1" fbc:label="G_WP_011000443_1">
+      <fbc:geneProduct metaid="G_WP_016724024_1" sboTerm="SBO:0000243" fbc:id="G_WP_016724024_1" fbc:name="G_WP_016724024_1" fbc:label="G_WP_016724024_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016724024_1" sboTerm="SBO:0000243" fbc:id="G_WP_016724024_1" fbc:name="G_WP_016724024_1" fbc:label="G_WP_016724024_1">
+      <fbc:geneProduct metaid="G_WP_011000443_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000443_1" fbc:name="G_WP_011000443_1" fbc:label="G_WP_011000443_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142661,14 +153477,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016723406_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723406_1" fbc:name="G_WP_016723406_1" fbc:label="G_WP_016723406_1">
+      <fbc:geneProduct metaid="G_WP_011000251_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000251_1" fbc:name="G_WP_011000251_1" fbc:label="G_WP_011000251_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000251_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000251_1" fbc:name="G_WP_011000251_1" fbc:label="G_WP_011000251_1">
+      <fbc:geneProduct metaid="G_WP_016723406_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723406_1" fbc:name="G_WP_016723406_1" fbc:label="G_WP_016723406_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142682,56 +153498,56 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003201_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003201_1" fbc:name="G_WP_011003201_1" fbc:label="G_WP_011003201_1">
+      <fbc:geneProduct metaid="G_WP_003262709_1" sboTerm="SBO:0000243" fbc:id="G_WP_003262709_1" fbc:name="G_WP_003262709_1" fbc:label="G_WP_003262709_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003204_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003204_1" fbc:name="G_WP_011003204_1" fbc:label="G_WP_011003204_1">
+      <fbc:geneProduct metaid="G_WP_011003203_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003203_1" fbc:name="G_WP_011003203_1" fbc:label="G_WP_011003203_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028853836_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853836_1" fbc:name="G_WP_028853836_1" fbc:label="G_WP_028853836_1">
+      <fbc:geneProduct metaid="G_WP_011003202_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003202_1" fbc:name="G_WP_011003202_1" fbc:label="G_WP_011003202_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003200_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003200_1" fbc:name="G_WP_011003200_1" fbc:label="G_WP_011003200_1">
+      <fbc:geneProduct metaid="G_WP_011003201_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003201_1" fbc:name="G_WP_011003201_1" fbc:label="G_WP_011003201_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003205_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003205_1" fbc:name="G_WP_011003205_1" fbc:label="G_WP_011003205_1">
+      <fbc:geneProduct metaid="G_WP_011003204_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003204_1" fbc:name="G_WP_011003204_1" fbc:label="G_WP_011003204_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_003262709_1" sboTerm="SBO:0000243" fbc:id="G_WP_003262709_1" fbc:name="G_WP_003262709_1" fbc:label="G_WP_003262709_1">
+      <fbc:geneProduct metaid="G_WP_011003205_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003205_1" fbc:name="G_WP_011003205_1" fbc:label="G_WP_011003205_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003202_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003202_1" fbc:name="G_WP_011003202_1" fbc:label="G_WP_011003202_1">
+      <fbc:geneProduct metaid="G_WP_011003200_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003200_1" fbc:name="G_WP_011003200_1" fbc:label="G_WP_011003200_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003203_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003203_1" fbc:name="G_WP_011003203_1" fbc:label="G_WP_011003203_1">
+      <fbc:geneProduct metaid="G_WP_028853836_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853836_1" fbc:name="G_WP_028853836_1" fbc:label="G_WP_028853836_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142752,6 +153568,20 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011000342_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000342_1" fbc:name="G_WP_011000342_1" fbc:label="G_WP_011000342_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_028852561_1" sboTerm="SBO:0000243" fbc:id="G_WP_028852561_1" fbc:name="G_WP_028852561_1" fbc:label="G_WP_028852561_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011001516_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001516_1" fbc:name="G_WP_011001516_1" fbc:label="G_WP_011001516_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142794,28 +153624,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001287_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001287_1" fbc:name="G_WP_011001287_1" fbc:label="G_WP_011001287_1">
+      <fbc:geneProduct metaid="G_WP_011001290_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001290_1" fbc:name="G_WP_011001290_1" fbc:label="G_WP_011001290_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004633_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004633_1" fbc:name="G_WP_011004633_1" fbc:label="G_WP_011004633_1">
+      <fbc:geneProduct metaid="G_WP_011001289_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001289_1" fbc:name="G_WP_011001289_1" fbc:label="G_WP_011001289_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001289_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001289_1" fbc:name="G_WP_011001289_1" fbc:label="G_WP_011001289_1">
+      <fbc:geneProduct metaid="G_WP_011004754_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004754_1" fbc:name="G_WP_011004754_1" fbc:label="G_WP_011004754_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001290_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001290_1" fbc:name="G_WP_011001290_1" fbc:label="G_WP_011001290_1">
+      <fbc:geneProduct metaid="G_WP_011004633_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004633_1" fbc:name="G_WP_011004633_1" fbc:label="G_WP_011004633_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142829,21 +153659,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004755_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004755_1" fbc:name="G_WP_011004755_1" fbc:label="G_WP_011004755_1">
+      <fbc:geneProduct metaid="G_WP_011003253_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003253_1" fbc:name="G_WP_011003253_1" fbc:label="G_WP_011003253_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003253_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003253_1" fbc:name="G_WP_011003253_1" fbc:label="G_WP_011003253_1">
+      <fbc:geneProduct metaid="G_WP_011004755_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004755_1" fbc:name="G_WP_011004755_1" fbc:label="G_WP_011004755_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004754_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004754_1" fbc:name="G_WP_011004754_1" fbc:label="G_WP_011004754_1">
+      <fbc:geneProduct metaid="G_WP_011001287_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001287_1" fbc:name="G_WP_011001287_1" fbc:label="G_WP_011001287_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142878,14 +153708,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001468_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001468_1" fbc:name="G_WP_011001468_1" fbc:label="G_WP_011001468_1">
+      <fbc:geneProduct metaid="G_WP_011001466_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001466_1" fbc:name="G_WP_011001466_1" fbc:label="G_WP_011001466_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001466_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001466_1" fbc:name="G_WP_011001466_1" fbc:label="G_WP_011001466_1">
+      <fbc:geneProduct metaid="G_WP_011001468_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001468_1" fbc:name="G_WP_011001468_1" fbc:label="G_WP_011001468_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142906,42 +153736,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004331_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004331_1" fbc:name="G_WP_011004331_1" fbc:label="G_WP_011004331_1">
+      <fbc:geneProduct metaid="G_WP_011003833_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003833_1" fbc:name="G_WP_011003833_1" fbc:label="G_WP_011003833_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001594_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001594_1" fbc:name="G_WP_011001594_1" fbc:label="G_WP_011001594_1">
+      <fbc:geneProduct metaid="G_WP_011004331_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004331_1" fbc:name="G_WP_011004331_1" fbc:label="G_WP_011004331_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003833_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003833_1" fbc:name="G_WP_011003833_1" fbc:label="G_WP_011003833_1">
+      <fbc:geneProduct metaid="G_WP_011003831_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003831_1" fbc:name="G_WP_011003831_1" fbc:label="G_WP_011003831_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003831_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003831_1" fbc:name="G_WP_011003831_1" fbc:label="G_WP_011003831_1">
+      <fbc:geneProduct metaid="G_WP_011001594_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001594_1" fbc:name="G_WP_011001594_1" fbc:label="G_WP_011001594_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003797_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003797_1" fbc:name="G_WP_011003797_1" fbc:label="G_WP_011003797_1">
+      <fbc:geneProduct metaid="G_WP_011003798_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003798_1" fbc:name="G_WP_011003798_1" fbc:label="G_WP_011003798_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003798_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003798_1" fbc:name="G_WP_011003798_1" fbc:label="G_WP_011003798_1">
+      <fbc:geneProduct metaid="G_WP_011003797_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003797_1" fbc:name="G_WP_011003797_1" fbc:label="G_WP_011003797_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142955,21 +153785,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002645_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002645_1" fbc:name="G_WP_011002645_1" fbc:label="G_WP_011002645_1">
+      <fbc:geneProduct metaid="G_WP_011000546_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000546_1" fbc:name="G_WP_011000546_1" fbc:label="G_WP_011000546_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004690_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004690_1" fbc:name="G_WP_011004690_1" fbc:label="G_WP_011004690_1">
+      <fbc:geneProduct metaid="G_WP_011004869_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004869_1" fbc:name="G_WP_011004869_1" fbc:label="G_WP_011004869_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000546_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000546_1" fbc:name="G_WP_011000546_1" fbc:label="G_WP_011000546_1">
+      <fbc:geneProduct metaid="G_WP_011003568_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003568_1" fbc:name="G_WP_011003568_1" fbc:label="G_WP_011003568_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142983,42 +153813,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003568_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003568_1" fbc:name="G_WP_011003568_1" fbc:label="G_WP_011003568_1">
+      <fbc:geneProduct metaid="G_WP_011002645_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002645_1" fbc:name="G_WP_011002645_1" fbc:label="G_WP_011002645_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004869_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004869_1" fbc:name="G_WP_011004869_1" fbc:label="G_WP_011004869_1">
+      <fbc:geneProduct metaid="G_WP_011002972_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002972_1" fbc:name="G_WP_011002972_1" fbc:label="G_WP_011002972_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002972_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002972_1" fbc:name="G_WP_011002972_1" fbc:label="G_WP_011002972_1">
+      <fbc:geneProduct metaid="G_WP_011003692_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003692_1" fbc:name="G_WP_011003692_1" fbc:label="G_WP_011003692_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003692_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003692_1" fbc:name="G_WP_011003692_1" fbc:label="G_WP_011003692_1">
+      <fbc:geneProduct metaid="G_WP_011002432_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002432_1" fbc:name="G_WP_011002432_1" fbc:label="G_WP_011002432_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002432_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002432_1" fbc:name="G_WP_011002432_1" fbc:label="G_WP_011002432_1">
+      <fbc:geneProduct metaid="G_WP_011004442_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004442_1" fbc:name="G_WP_011004442_1" fbc:label="G_WP_011004442_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004442_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004442_1" fbc:name="G_WP_011004442_1" fbc:label="G_WP_011004442_1">
+      <fbc:geneProduct metaid="G_WP_011004690_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004690_1" fbc:name="G_WP_011004690_1" fbc:label="G_WP_011004690_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143039,35 +153869,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003228_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003228_1" fbc:name="G_WP_011003228_1" fbc:label="G_WP_011003228_1">
+      <fbc:geneProduct metaid="G_WP_011004454_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004454_1" fbc:name="G_WP_011004454_1" fbc:label="G_WP_011004454_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001510_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001510_1" fbc:name="G_WP_011001510_1" fbc:label="G_WP_011001510_1">
+      <fbc:geneProduct metaid="G_WP_011000136_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000136_1" fbc:name="G_WP_011000136_1" fbc:label="G_WP_011000136_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876655_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876655_1" fbc:name="G_WP_043876655_1" fbc:label="G_WP_043876655_1">
+      <fbc:geneProduct metaid="G_WP_011003228_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003228_1" fbc:name="G_WP_011003228_1" fbc:label="G_WP_011003228_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001040_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001040_1" fbc:name="G_WP_011001040_1" fbc:label="G_WP_011001040_1">
+      <fbc:geneProduct metaid="G_WP_011001510_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001510_1" fbc:name="G_WP_011001510_1" fbc:label="G_WP_011001510_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001038_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001038_1" fbc:name="G_WP_011001038_1" fbc:label="G_WP_011001038_1">
+      <fbc:geneProduct metaid="G_WP_043876655_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876655_1" fbc:name="G_WP_043876655_1" fbc:label="G_WP_043876655_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143109,14 +153939,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876870_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876870_1" fbc:name="G_WP_043876870_1" fbc:label="G_WP_043876870_1">
+      <fbc:geneProduct metaid="G_WP_011000431_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000431_1" fbc:name="G_WP_011000431_1" fbc:label="G_WP_011000431_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000431_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000431_1" fbc:name="G_WP_011000431_1" fbc:label="G_WP_011000431_1">
+      <fbc:geneProduct metaid="G_WP_043876870_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876870_1" fbc:name="G_WP_043876870_1" fbc:label="G_WP_043876870_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143130,14 +153960,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876968_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876968_1" fbc:name="G_WP_043876968_1" fbc:label="G_WP_043876968_1">
+      <fbc:geneProduct metaid="G_WP_011001747_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001747_1" fbc:name="G_WP_011001747_1" fbc:label="G_WP_011001747_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001747_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001747_1" fbc:name="G_WP_011001747_1" fbc:label="G_WP_011001747_1">
+      <fbc:geneProduct metaid="G_WP_043876968_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876968_1" fbc:name="G_WP_043876968_1" fbc:label="G_WP_043876968_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143151,14 +153981,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002339_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002339_1" fbc:name="G_WP_011002339_1" fbc:label="G_WP_011002339_1">
+      <fbc:geneProduct metaid="G_WP_011002321_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002321_1" fbc:name="G_WP_011002321_1" fbc:label="G_WP_011002321_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000589_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000589_1" fbc:name="G_WP_011000589_1" fbc:label="G_WP_011000589_1">
+      <fbc:geneProduct metaid="G_WP_011003726_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003726_1" fbc:name="G_WP_011003726_1" fbc:label="G_WP_011003726_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011000687_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000687_1" fbc:name="G_WP_011000687_1" fbc:label="G_WP_011000687_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001900_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001900_1" fbc:name="G_WP_011001900_1" fbc:label="G_WP_011001900_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011002339_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002339_1" fbc:name="G_WP_011002339_1" fbc:label="G_WP_011002339_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143172,6 +154023,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011000589_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000589_1" fbc:name="G_WP_011000589_1" fbc:label="G_WP_011000589_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_010999978_1" sboTerm="SBO:0000243" fbc:id="G_WP_010999978_1" fbc:name="G_WP_010999978_1" fbc:label="G_WP_010999978_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143221,14 +154079,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001416_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001416_1" fbc:name="G_WP_011001416_1" fbc:label="G_WP_011001416_1">
+      <fbc:geneProduct metaid="G_WP_011001417_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001417_1" fbc:name="G_WP_011001417_1" fbc:label="G_WP_011001417_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001417_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001417_1" fbc:name="G_WP_011001417_1" fbc:label="G_WP_011001417_1">
+      <fbc:geneProduct metaid="G_WP_011001416_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001416_1" fbc:name="G_WP_011001416_1" fbc:label="G_WP_011001416_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143249,21 +154107,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876686_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876686_1" fbc:name="G_WP_043876686_1" fbc:label="G_WP_043876686_1">
+      <fbc:geneProduct metaid="G_WP_011002090_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002090_1" fbc:name="G_WP_011002090_1" fbc:label="G_WP_011002090_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002090_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002090_1" fbc:name="G_WP_011002090_1" fbc:label="G_WP_011002090_1">
+      <fbc:geneProduct metaid="G_WP_043876686_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876686_1" fbc:name="G_WP_043876686_1" fbc:label="G_WP_043876686_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003386_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003386_1" fbc:name="G_WP_011003386_1" fbc:label="G_WP_011003386_1">
+      <fbc:geneProduct metaid="G_WP_011003545_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003545_1" fbc:name="G_WP_011003545_1" fbc:label="G_WP_011003545_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143277,49 +154135,49 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000506_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000506_1" fbc:name="G_WP_011000506_1" fbc:label="G_WP_011000506_1">
+      <fbc:geneProduct metaid="G_WP_011003386_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003386_1" fbc:name="G_WP_011003386_1" fbc:label="G_WP_011003386_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001285_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001285_1" fbc:name="G_WP_011001285_1" fbc:label="G_WP_011001285_1">
+      <fbc:geneProduct metaid="G_WP_011000506_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000506_1" fbc:name="G_WP_011000506_1" fbc:label="G_WP_011000506_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001295_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001295_1" fbc:name="G_WP_011001295_1" fbc:label="G_WP_011001295_1">
+      <fbc:geneProduct metaid="G_WP_011001285_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001285_1" fbc:name="G_WP_011001285_1" fbc:label="G_WP_011001285_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001294_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001294_1" fbc:name="G_WP_011001294_1" fbc:label="G_WP_011001294_1">
+      <fbc:geneProduct metaid="G_WP_011001296_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001296_1" fbc:name="G_WP_011001296_1" fbc:label="G_WP_011001296_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001296_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001296_1" fbc:name="G_WP_011001296_1" fbc:label="G_WP_011001296_1">
+      <fbc:geneProduct metaid="G_WP_011001294_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001294_1" fbc:name="G_WP_011001294_1" fbc:label="G_WP_011001294_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000931_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000931_1" fbc:name="G_WP_011000931_1" fbc:label="G_WP_011000931_1">
+      <fbc:geneProduct metaid="G_WP_011001295_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001295_1" fbc:name="G_WP_011001295_1" fbc:label="G_WP_011001295_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003856_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003856_1" fbc:name="G_WP_011003856_1" fbc:label="G_WP_011003856_1">
+      <fbc:geneProduct metaid="G_WP_011000931_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000931_1" fbc:name="G_WP_011000931_1" fbc:label="G_WP_011000931_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143333,7 +154191,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001927_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001927_1" fbc:name="G_WP_011001927_1" fbc:label="G_WP_011001927_1">
+      <fbc:geneProduct metaid="G_WP_011003856_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003856_1" fbc:name="G_WP_011003856_1" fbc:label="G_WP_011003856_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143347,7 +154205,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001536_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001536_1" fbc:name="G_WP_011001536_1" fbc:label="G_WP_011001536_1">
+      <fbc:geneProduct metaid="G_WP_011001927_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001927_1" fbc:name="G_WP_011001927_1" fbc:label="G_WP_011001927_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143361,7 +154219,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003946_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003946_1" fbc:name="G_WP_011003946_1" fbc:label="G_WP_011003946_1">
+      <fbc:geneProduct metaid="G_WP_011001536_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001536_1" fbc:name="G_WP_011001536_1" fbc:label="G_WP_011001536_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143375,49 +154233,49 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001076_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001076_1" fbc:name="G_WP_011001076_1" fbc:label="G_WP_011001076_1">
+      <fbc:geneProduct metaid="G_WP_011003946_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003946_1" fbc:name="G_WP_011003946_1" fbc:label="G_WP_011003946_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004777_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004777_1" fbc:name="G_WP_011004777_1" fbc:label="G_WP_011004777_1">
+      <fbc:geneProduct metaid="G_WP_011001076_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001076_1" fbc:name="G_WP_011001076_1" fbc:label="G_WP_011001076_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003231_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003231_1" fbc:name="G_WP_011003231_1" fbc:label="G_WP_011003231_1">
+      <fbc:geneProduct metaid="G_WP_011004777_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004777_1" fbc:name="G_WP_011004777_1" fbc:label="G_WP_011004777_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004553_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004553_1" fbc:name="G_WP_011004553_1" fbc:label="G_WP_011004553_1">
+      <fbc:geneProduct metaid="G_WP_011003231_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003231_1" fbc:name="G_WP_011003231_1" fbc:label="G_WP_011003231_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000687_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000687_1" fbc:name="G_WP_011000687_1" fbc:label="G_WP_011000687_1">
+      <fbc:geneProduct metaid="G_WP_011004553_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004553_1" fbc:name="G_WP_011004553_1" fbc:label="G_WP_011004553_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001900_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001900_1" fbc:name="G_WP_011001900_1" fbc:label="G_WP_011001900_1">
+      <fbc:geneProduct metaid="G_WP_043876581_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876581_1" fbc:name="G_WP_043876581_1" fbc:label="G_WP_043876581_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876581_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876581_1" fbc:name="G_WP_043876581_1" fbc:label="G_WP_043876581_1">
+      <fbc:geneProduct metaid="G_WP_011002154_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002154_1" fbc:name="G_WP_011002154_1" fbc:label="G_WP_011002154_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143438,21 +154296,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002154_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002154_1" fbc:name="G_WP_011002154_1" fbc:label="G_WP_011002154_1">
+      <fbc:geneProduct metaid="G_WP_043876942_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876942_1" fbc:name="G_WP_043876942_1" fbc:label="G_WP_043876942_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876942_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876942_1" fbc:name="G_WP_043876942_1" fbc:label="G_WP_043876942_1">
+      <fbc:geneProduct metaid="G_WP_011002835_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002835_1" fbc:name="G_WP_011002835_1" fbc:label="G_WP_011002835_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002835_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002835_1" fbc:name="G_WP_011002835_1" fbc:label="G_WP_011002835_1">
+      <fbc:geneProduct metaid="G_WP_011002833_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002833_1" fbc:name="G_WP_011002833_1" fbc:label="G_WP_011002833_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143466,21 +154324,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002833_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002833_1" fbc:name="G_WP_011002833_1" fbc:label="G_WP_011002833_1">
+      <fbc:geneProduct metaid="G_WP_011004812_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004812_1" fbc:name="G_WP_011004812_1" fbc:label="G_WP_011004812_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004812_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004812_1" fbc:name="G_WP_011004812_1" fbc:label="G_WP_011004812_1">
+      <fbc:geneProduct metaid="G_WP_011004810_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004810_1" fbc:name="G_WP_011004810_1" fbc:label="G_WP_011004810_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004810_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004810_1" fbc:name="G_WP_011004810_1" fbc:label="G_WP_011004810_1">
+      <fbc:geneProduct metaid="G_WP_011004007_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004007_1" fbc:name="G_WP_011004007_1" fbc:label="G_WP_011004007_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143494,14 +154352,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001581_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001581_1" fbc:name="G_WP_011001581_1" fbc:label="G_WP_011001581_1">
+      <fbc:geneProduct metaid="G_WP_011001778_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001778_1" fbc:name="G_WP_011001778_1" fbc:label="G_WP_011001778_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001778_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001778_1" fbc:name="G_WP_011001778_1" fbc:label="G_WP_011001778_1">
+      <fbc:geneProduct metaid="G_WP_011001581_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001581_1" fbc:name="G_WP_011001581_1" fbc:label="G_WP_011001581_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143529,28 +154387,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003786_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003786_1" fbc:name="G_WP_011003786_1" fbc:label="G_WP_011003786_1">
+      <fbc:geneProduct metaid="G_WP_011003289_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003289_1" fbc:name="G_WP_011003289_1" fbc:label="G_WP_011003289_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003289_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003289_1" fbc:name="G_WP_011003289_1" fbc:label="G_WP_011003289_1">
+      <fbc:geneProduct metaid="G_WP_011003786_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003786_1" fbc:name="G_WP_011003786_1" fbc:label="G_WP_011003786_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001797_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001797_1" fbc:name="G_WP_011001797_1" fbc:label="G_WP_011001797_1">
+      <fbc:geneProduct metaid="G_WP_011001799_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001799_1" fbc:name="G_WP_011001799_1" fbc:label="G_WP_011001799_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001799_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001799_1" fbc:name="G_WP_011001799_1" fbc:label="G_WP_011001799_1">
+      <fbc:geneProduct metaid="G_WP_011001797_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001797_1" fbc:name="G_WP_011001797_1" fbc:label="G_WP_011001797_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143571,42 +154429,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002823_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002823_1" fbc:name="G_WP_011002823_1" fbc:label="G_WP_011002823_1">
+      <fbc:geneProduct metaid="G_WP_011002821_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002821_1" fbc:name="G_WP_011002821_1" fbc:label="G_WP_011002821_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002822_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002822_1" fbc:name="G_WP_011002822_1" fbc:label="G_WP_011002822_1">
+      <fbc:geneProduct metaid="G_WP_011001798_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001798_1" fbc:name="G_WP_011001798_1" fbc:label="G_WP_011001798_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001796_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001796_1" fbc:name="G_WP_011001796_1" fbc:label="G_WP_011001796_1">
+      <fbc:geneProduct metaid="G_WP_011002823_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002823_1" fbc:name="G_WP_011002823_1" fbc:label="G_WP_011002823_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002821_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002821_1" fbc:name="G_WP_011002821_1" fbc:label="G_WP_011002821_1">
+      <fbc:geneProduct metaid="G_WP_011002822_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002822_1" fbc:name="G_WP_011002822_1" fbc:label="G_WP_011002822_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002820_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002820_1" fbc:name="G_WP_011002820_1" fbc:label="G_WP_011002820_1">
+      <fbc:geneProduct metaid="G_WP_011001796_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001796_1" fbc:name="G_WP_011001796_1" fbc:label="G_WP_011001796_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001798_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001798_1" fbc:name="G_WP_011001798_1" fbc:label="G_WP_011001798_1">
+      <fbc:geneProduct metaid="G_WP_011002820_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002820_1" fbc:name="G_WP_011002820_1" fbc:label="G_WP_011002820_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143620,7 +154478,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000330_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000330_1" fbc:name="G_WP_011000330_1" fbc:label="G_WP_011000330_1">
+      <fbc:geneProduct metaid="G_WP_011000326_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000326_1" fbc:name="G_WP_011000326_1" fbc:label="G_WP_011000326_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143634,35 +154492,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000326_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000326_1" fbc:name="G_WP_011000326_1" fbc:label="G_WP_011000326_1">
+      <fbc:geneProduct metaid="G_WP_011000328_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000328_1" fbc:name="G_WP_011000328_1" fbc:label="G_WP_011000328_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000328_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000328_1" fbc:name="G_WP_011000328_1" fbc:label="G_WP_011000328_1">
+      <fbc:geneProduct metaid="G_WP_011000330_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000330_1" fbc:name="G_WP_011000330_1" fbc:label="G_WP_011000330_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001226_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001226_1" fbc:name="G_WP_011001226_1" fbc:label="G_WP_011001226_1">
+      <fbc:geneProduct metaid="G_WP_011001225_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001225_1" fbc:name="G_WP_011001225_1" fbc:label="G_WP_011001225_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001225_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001225_1" fbc:name="G_WP_011001225_1" fbc:label="G_WP_011001225_1">
+      <fbc:geneProduct metaid="G_WP_016722100_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722100_1" fbc:name="G_WP_016722100_1" fbc:label="G_WP_016722100_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016722100_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722100_1" fbc:name="G_WP_016722100_1" fbc:label="G_WP_016722100_1">
+      <fbc:geneProduct metaid="G_WP_011001226_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001226_1" fbc:name="G_WP_011001226_1" fbc:label="G_WP_011001226_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143704,14 +154562,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001189_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001189_1" fbc:name="G_WP_011001189_1" fbc:label="G_WP_011001189_1">
+      <fbc:geneProduct metaid="G_WP_011001186_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001186_1" fbc:name="G_WP_011001186_1" fbc:label="G_WP_011001186_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001186_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001186_1" fbc:name="G_WP_011001186_1" fbc:label="G_WP_011001186_1">
+      <fbc:geneProduct metaid="G_WP_011001189_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001189_1" fbc:name="G_WP_011001189_1" fbc:label="G_WP_011001189_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143781,14 +154639,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003977_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003977_1" fbc:name="G_WP_011003977_1" fbc:label="G_WP_011003977_1">
+      <fbc:geneProduct metaid="G_WP_016725146_1" sboTerm="SBO:0000243" fbc:id="G_WP_016725146_1" fbc:name="G_WP_016725146_1" fbc:label="G_WP_016725146_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016725146_1" sboTerm="SBO:0000243" fbc:id="G_WP_016725146_1" fbc:name="G_WP_016725146_1" fbc:label="G_WP_016725146_1">
+      <fbc:geneProduct metaid="G_WP_011003977_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003977_1" fbc:name="G_WP_011003977_1" fbc:label="G_WP_011003977_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143809,14 +154667,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000668_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000668_1" fbc:name="G_WP_011000668_1" fbc:label="G_WP_011000668_1">
+      <fbc:geneProduct metaid="G_WP_043876869_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876869_1" fbc:name="G_WP_043876869_1" fbc:label="G_WP_043876869_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876869_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876869_1" fbc:name="G_WP_043876869_1" fbc:label="G_WP_043876869_1">
+      <fbc:geneProduct metaid="G_WP_011000668_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000668_1" fbc:name="G_WP_011000668_1" fbc:label="G_WP_011000668_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143830,14 +154688,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002570_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002570_1" fbc:name="G_WP_011002570_1" fbc:label="G_WP_011002570_1">
+      <fbc:geneProduct metaid="G_WP_016723400_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723400_1" fbc:name="G_WP_016723400_1" fbc:label="G_WP_016723400_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016723400_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723400_1" fbc:name="G_WP_016723400_1" fbc:label="G_WP_016723400_1">
+      <fbc:geneProduct metaid="G_WP_011002570_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002570_1" fbc:name="G_WP_011002570_1" fbc:label="G_WP_011002570_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143872,14 +154730,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003448_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003448_1" fbc:name="G_WP_011003448_1" fbc:label="G_WP_011003448_1">
+      <fbc:geneProduct metaid="G_WP_011000296_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000296_1" fbc:name="G_WP_011000296_1" fbc:label="G_WP_011000296_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002351_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002351_1" fbc:name="G_WP_011002351_1" fbc:label="G_WP_011002351_1">
+      <fbc:geneProduct metaid="G_WP_011004920_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004920_1" fbc:name="G_WP_011004920_1" fbc:label="G_WP_011004920_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143893,21 +154751,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000296_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000296_1" fbc:name="G_WP_011000296_1" fbc:label="G_WP_011000296_1">
+      <fbc:geneProduct metaid="G_WP_011002351_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002351_1" fbc:name="G_WP_011002351_1" fbc:label="G_WP_011002351_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004920_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004920_1" fbc:name="G_WP_011004920_1" fbc:label="G_WP_011004920_1">
+      <fbc:geneProduct metaid="G_WP_011001830_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001830_1" fbc:name="G_WP_011001830_1" fbc:label="G_WP_011001830_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001830_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001830_1" fbc:name="G_WP_011001830_1" fbc:label="G_WP_011001830_1">
+      <fbc:geneProduct metaid="G_WP_011003448_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003448_1" fbc:name="G_WP_011003448_1" fbc:label="G_WP_011003448_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143956,14 +154814,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000622_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000622_1" fbc:name="G_WP_011000622_1" fbc:label="G_WP_011000622_1">
+      <fbc:geneProduct metaid="G_WP_011001095_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001095_1" fbc:name="G_WP_011001095_1" fbc:label="G_WP_011001095_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001095_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001095_1" fbc:name="G_WP_011001095_1" fbc:label="G_WP_011001095_1">
+      <fbc:geneProduct metaid="G_WP_011000622_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000622_1" fbc:name="G_WP_011000622_1" fbc:label="G_WP_011000622_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144005,14 +154863,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002779_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002779_1" fbc:name="G_WP_011002779_1" fbc:label="G_WP_011002779_1">
+      <fbc:geneProduct metaid="G_WP_011001978_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001978_1" fbc:name="G_WP_011001978_1" fbc:label="G_WP_011001978_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001978_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001978_1" fbc:name="G_WP_011001978_1" fbc:label="G_WP_011001978_1">
+      <fbc:geneProduct metaid="G_WP_011002779_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002779_1" fbc:name="G_WP_011002779_1" fbc:label="G_WP_011002779_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144082,14 +154940,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003381_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003381_1" fbc:name="G_WP_011003381_1" fbc:label="G_WP_011003381_1">
+      <fbc:geneProduct metaid="G_WP_011003382_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003382_1" fbc:name="G_WP_011003382_1" fbc:label="G_WP_011003382_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003382_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003382_1" fbc:name="G_WP_011003382_1" fbc:label="G_WP_011003382_1">
+      <fbc:geneProduct metaid="G_WP_011003381_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003381_1" fbc:name="G_WP_011003381_1" fbc:label="G_WP_011003381_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144124,14 +154982,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002724_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002724_1" fbc:name="G_WP_011002724_1" fbc:label="G_WP_011002724_1">
+      <fbc:geneProduct metaid="G_WP_011002920_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002920_1" fbc:name="G_WP_011002920_1" fbc:label="G_WP_011002920_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002920_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002920_1" fbc:name="G_WP_011002920_1" fbc:label="G_WP_011002920_1">
+      <fbc:geneProduct metaid="G_WP_011002724_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002724_1" fbc:name="G_WP_011002724_1" fbc:label="G_WP_011002724_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144145,14 +155003,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003096_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003096_1" fbc:name="G_WP_011003096_1" fbc:label="G_WP_011003096_1">
+      <fbc:geneProduct metaid="G_WP_011004402_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004402_1" fbc:name="G_WP_011004402_1" fbc:label="G_WP_011004402_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004402_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004402_1" fbc:name="G_WP_011004402_1" fbc:label="G_WP_011004402_1">
+      <fbc:geneProduct metaid="G_WP_011003096_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003096_1" fbc:name="G_WP_011003096_1" fbc:label="G_WP_011003096_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144320,14 +155178,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003016_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003016_1" fbc:name="G_WP_011003016_1" fbc:label="G_WP_011003016_1">
+      <fbc:geneProduct metaid="G_WP_011003017_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003017_1" fbc:name="G_WP_011003017_1" fbc:label="G_WP_011003017_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003017_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003017_1" fbc:name="G_WP_011003017_1" fbc:label="G_WP_011003017_1">
+      <fbc:geneProduct metaid="G_WP_011003016_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003016_1" fbc:name="G_WP_011003016_1" fbc:label="G_WP_011003016_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144362,6 +155220,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001980_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001980_1" fbc:name="G_WP_011001980_1" fbc:label="G_WP_011001980_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011003379_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003379_1" fbc:name="G_WP_011003379_1" fbc:label="G_WP_011003379_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144383,14 +155248,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003939_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003939_1" fbc:name="G_WP_011003939_1" fbc:label="G_WP_011003939_1">
+      <fbc:geneProduct metaid="G_WP_011004670_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004670_1" fbc:name="G_WP_011004670_1" fbc:label="G_WP_011004670_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004670_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004670_1" fbc:name="G_WP_011004670_1" fbc:label="G_WP_011004670_1">
+      <fbc:geneProduct metaid="G_WP_011003939_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003939_1" fbc:name="G_WP_011003939_1" fbc:label="G_WP_011003939_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144425,7 +155290,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002293_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002293_1" fbc:name="G_WP_011002293_1" fbc:label="G_WP_011002293_1">
+      <fbc:geneProduct metaid="G_WP_011004340_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004340_1" fbc:name="G_WP_011004340_1" fbc:label="G_WP_011004340_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144439,7 +155304,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002765_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002765_1" fbc:name="G_WP_011002765_1" fbc:label="G_WP_011002765_1">
+      <fbc:geneProduct metaid="G_WP_011002293_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002293_1" fbc:name="G_WP_011002293_1" fbc:label="G_WP_011002293_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144453,21 +155318,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004340_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004340_1" fbc:name="G_WP_011004340_1" fbc:label="G_WP_011004340_1">
+      <fbc:geneProduct metaid="G_WP_011002765_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002765_1" fbc:name="G_WP_011002765_1" fbc:label="G_WP_011002765_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004511_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004511_1" fbc:name="G_WP_011004511_1" fbc:label="G_WP_011004511_1">
+      <fbc:geneProduct metaid="G_WP_011001288_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001288_1" fbc:name="G_WP_011001288_1" fbc:label="G_WP_011001288_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001288_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001288_1" fbc:name="G_WP_011001288_1" fbc:label="G_WP_011001288_1">
+      <fbc:geneProduct metaid="G_WP_011004511_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004511_1" fbc:name="G_WP_011004511_1" fbc:label="G_WP_011004511_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144502,13 +155367,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002321_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002321_1" fbc:name="G_WP_011002321_1" fbc:label="G_WP_011002321_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011001254_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001254_1" fbc:name="G_WP_011001254_1" fbc:label="G_WP_011001254_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144516,14 +155374,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004109_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004109_1" fbc:name="G_WP_011004109_1" fbc:label="G_WP_011004109_1">
+      <fbc:geneProduct metaid="G_WP_011001902_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001902_1" fbc:name="G_WP_011001902_1" fbc:label="G_WP_011001902_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001902_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001902_1" fbc:name="G_WP_011001902_1" fbc:label="G_WP_011001902_1">
+      <fbc:geneProduct metaid="G_WP_011004109_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004109_1" fbc:name="G_WP_011004109_1" fbc:label="G_WP_011004109_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144670,14 +155528,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002769_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002769_1" fbc:name="G_WP_011002769_1" fbc:label="G_WP_011002769_1">
+      <fbc:geneProduct metaid="G_WP_011002767_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002767_1" fbc:name="G_WP_011002767_1" fbc:label="G_WP_011002767_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002767_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002767_1" fbc:name="G_WP_011002767_1" fbc:label="G_WP_011002767_1">
+      <fbc:geneProduct metaid="G_WP_011002769_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002769_1" fbc:name="G_WP_011002769_1" fbc:label="G_WP_011002769_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144698,28 +155556,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003384_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003384_1" fbc:name="G_WP_011003384_1" fbc:label="G_WP_011003384_1">
+      <fbc:geneProduct metaid="G_WP_011001810_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001810_1" fbc:name="G_WP_011001810_1" fbc:label="G_WP_011001810_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001810_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001810_1" fbc:name="G_WP_011001810_1" fbc:label="G_WP_011001810_1">
+      <fbc:geneProduct metaid="G_WP_011003384_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003384_1" fbc:name="G_WP_011003384_1" fbc:label="G_WP_011003384_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004561_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004561_1" fbc:name="G_WP_011004561_1" fbc:label="G_WP_011004561_1">
+      <fbc:geneProduct metaid="G_WP_011001892_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001892_1" fbc:name="G_WP_011001892_1" fbc:label="G_WP_011001892_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001892_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001892_1" fbc:name="G_WP_011001892_1" fbc:label="G_WP_011001892_1">
+      <fbc:geneProduct metaid="G_WP_011004561_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004561_1" fbc:name="G_WP_011004561_1" fbc:label="G_WP_011004561_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144782,14 +155640,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001216_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001216_1" fbc:name="G_WP_011001216_1" fbc:label="G_WP_011001216_1">
+      <fbc:geneProduct metaid="G_WP_011001214_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001214_1" fbc:name="G_WP_011001214_1" fbc:label="G_WP_011001214_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001214_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001214_1" fbc:name="G_WP_011001214_1" fbc:label="G_WP_011001214_1">
+      <fbc:geneProduct metaid="G_WP_011001216_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001216_1" fbc:name="G_WP_011001216_1" fbc:label="G_WP_011001216_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144838,14 +155696,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004201_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004201_1" fbc:name="G_WP_011004201_1" fbc:label="G_WP_011004201_1">
+      <fbc:geneProduct metaid="G_WP_011000726_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000726_1" fbc:name="G_WP_011000726_1" fbc:label="G_WP_011000726_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000726_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000726_1" fbc:name="G_WP_011000726_1" fbc:label="G_WP_011000726_1">
+      <fbc:geneProduct metaid="G_WP_011004201_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004201_1" fbc:name="G_WP_011004201_1" fbc:label="G_WP_011004201_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144880,6 +155738,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001527_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001527_1" fbc:name="G_WP_011001527_1" fbc:label="G_WP_011001527_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011001031_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001031_1" fbc:name="G_WP_011001031_1" fbc:label="G_WP_011001031_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144915,14 +155780,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003327_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003327_1" fbc:name="G_WP_011003327_1" fbc:label="G_WP_011003327_1">
+      <fbc:geneProduct metaid="G_WP_011002165_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002165_1" fbc:name="G_WP_011002165_1" fbc:label="G_WP_011002165_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002165_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002165_1" fbc:name="G_WP_011002165_1" fbc:label="G_WP_011002165_1">
+      <fbc:geneProduct metaid="G_WP_011003327_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003327_1" fbc:name="G_WP_011003327_1" fbc:label="G_WP_011003327_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144999,21 +155864,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000145_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000145_1" fbc:name="G_WP_011000145_1" fbc:label="G_WP_011000145_1">
+      <fbc:geneProduct metaid="G_WP_011000446_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000446_1" fbc:name="G_WP_011000446_1" fbc:label="G_WP_011000446_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028852952_1" sboTerm="SBO:0000243" fbc:id="G_WP_028852952_1" fbc:name="G_WP_028852952_1" fbc:label="G_WP_028852952_1">
+      <fbc:geneProduct metaid="G_WP_011000145_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000145_1" fbc:name="G_WP_011000145_1" fbc:label="G_WP_011000145_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000446_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000446_1" fbc:name="G_WP_011000446_1" fbc:label="G_WP_011000446_1">
+      <fbc:geneProduct metaid="G_WP_028852952_1" sboTerm="SBO:0000243" fbc:id="G_WP_028852952_1" fbc:name="G_WP_028852952_1" fbc:label="G_WP_028852952_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145069,28 +155934,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002942_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002942_1" fbc:name="G_WP_011002942_1" fbc:label="G_WP_011002942_1">
+      <fbc:geneProduct metaid="G_WP_011002941_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002941_1" fbc:name="G_WP_011002941_1" fbc:label="G_WP_011002941_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002941_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002941_1" fbc:name="G_WP_011002941_1" fbc:label="G_WP_011002941_1">
+      <fbc:geneProduct metaid="G_WP_011002942_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002942_1" fbc:name="G_WP_011002942_1" fbc:label="G_WP_011002942_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028853368_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853368_1" fbc:name="G_WP_028853368_1" fbc:label="G_WP_028853368_1">
+      <fbc:geneProduct metaid="G_WP_011002940_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002940_1" fbc:name="G_WP_011002940_1" fbc:label="G_WP_011002940_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002940_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002940_1" fbc:name="G_WP_011002940_1" fbc:label="G_WP_011002940_1">
+      <fbc:geneProduct metaid="G_WP_028853368_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853368_1" fbc:name="G_WP_028853368_1" fbc:label="G_WP_028853368_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145125,7 +155990,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004258_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004258_1" fbc:name="G_WP_011004258_1" fbc:label="G_WP_011004258_1">
+      <fbc:geneProduct metaid="G_WP_011002184_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002184_1" fbc:name="G_WP_011002184_1" fbc:label="G_WP_011002184_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145139,7 +156004,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002184_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002184_1" fbc:name="G_WP_011002184_1" fbc:label="G_WP_011002184_1">
+      <fbc:geneProduct metaid="G_WP_011004258_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004258_1" fbc:name="G_WP_011004258_1" fbc:label="G_WP_011004258_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145195,14 +156060,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002870_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002870_1" fbc:name="G_WP_011002870_1" fbc:label="G_WP_011002870_1">
+      <fbc:geneProduct metaid="G_WP_011002869_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002869_1" fbc:name="G_WP_011002869_1" fbc:label="G_WP_011002869_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002869_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002869_1" fbc:name="G_WP_011002869_1" fbc:label="G_WP_011002869_1">
+      <fbc:geneProduct metaid="G_WP_011002870_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002870_1" fbc:name="G_WP_011002870_1" fbc:label="G_WP_011002870_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145265,14 +156130,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003178_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003178_1" fbc:name="G_WP_011003178_1" fbc:label="G_WP_011003178_1">
+      <fbc:geneProduct metaid="G_WP_011003179_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003179_1" fbc:name="G_WP_011003179_1" fbc:label="G_WP_011003179_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003179_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003179_1" fbc:name="G_WP_011003179_1" fbc:label="G_WP_011003179_1">
+      <fbc:geneProduct metaid="G_WP_011003178_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003178_1" fbc:name="G_WP_011003178_1" fbc:label="G_WP_011003178_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145293,28 +156158,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002576_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002576_1" fbc:name="G_WP_011002576_1" fbc:label="G_WP_011002576_1">
+      <fbc:geneProduct metaid="G_WP_011002577_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002577_1" fbc:name="G_WP_011002577_1" fbc:label="G_WP_011002577_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000415_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000415_1" fbc:name="G_WP_011000415_1" fbc:label="G_WP_011000415_1">
+      <fbc:geneProduct metaid="G_WP_011002578_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002578_1" fbc:name="G_WP_011002578_1" fbc:label="G_WP_011002578_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002578_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002578_1" fbc:name="G_WP_011002578_1" fbc:label="G_WP_011002578_1">
+      <fbc:geneProduct metaid="G_WP_011002576_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002576_1" fbc:name="G_WP_011002576_1" fbc:label="G_WP_011002576_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002577_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002577_1" fbc:name="G_WP_011002577_1" fbc:label="G_WP_011002577_1">
+      <fbc:geneProduct metaid="G_WP_011000415_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000415_1" fbc:name="G_WP_011000415_1" fbc:label="G_WP_011000415_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145342,14 +156207,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016721710_1" sboTerm="SBO:0000243" fbc:id="G_WP_016721710_1" fbc:name="G_WP_016721710_1" fbc:label="G_WP_016721710_1">
+      <fbc:geneProduct metaid="G_WP_011001491_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001491_1" fbc:name="G_WP_011001491_1" fbc:label="G_WP_011001491_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001491_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001491_1" fbc:name="G_WP_011001491_1" fbc:label="G_WP_011001491_1">
+      <fbc:geneProduct metaid="G_WP_016721710_1" sboTerm="SBO:0000243" fbc:id="G_WP_016721710_1" fbc:name="G_WP_016721710_1" fbc:label="G_WP_016721710_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145405,14 +156270,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001217_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001217_1" fbc:name="G_WP_011001217_1" fbc:label="G_WP_011001217_1">
+      <fbc:geneProduct metaid="G_WP_011000461_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000461_1" fbc:name="G_WP_011000461_1" fbc:label="G_WP_011000461_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000461_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000461_1" fbc:name="G_WP_011000461_1" fbc:label="G_WP_011000461_1">
+      <fbc:geneProduct metaid="G_WP_011001217_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001217_1" fbc:name="G_WP_011001217_1" fbc:label="G_WP_011001217_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145447,14 +156312,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000271_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000271_1" fbc:name="G_WP_011000271_1" fbc:label="G_WP_011000271_1">
+      <fbc:geneProduct metaid="G_WP_016721800_1" sboTerm="SBO:0000243" fbc:id="G_WP_016721800_1" fbc:name="G_WP_016721800_1" fbc:label="G_WP_016721800_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016721800_1" sboTerm="SBO:0000243" fbc:id="G_WP_016721800_1" fbc:name="G_WP_016721800_1" fbc:label="G_WP_016721800_1">
+      <fbc:geneProduct metaid="G_WP_011000271_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000271_1" fbc:name="G_WP_011000271_1" fbc:label="G_WP_011000271_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145475,28 +156340,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001331_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001331_1" fbc:name="G_WP_011001331_1" fbc:label="G_WP_011001331_1">
+      <fbc:geneProduct metaid="G_WP_011001328_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001328_1" fbc:name="G_WP_011001328_1" fbc:label="G_WP_011001328_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001330_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001330_1" fbc:name="G_WP_011001330_1" fbc:label="G_WP_011001330_1">
+      <fbc:geneProduct metaid="G_WP_011001329_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001329_1" fbc:name="G_WP_011001329_1" fbc:label="G_WP_011001329_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001328_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001328_1" fbc:name="G_WP_011001328_1" fbc:label="G_WP_011001328_1">
+      <fbc:geneProduct metaid="G_WP_011001330_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001330_1" fbc:name="G_WP_011001330_1" fbc:label="G_WP_011001330_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001329_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001329_1" fbc:name="G_WP_011001329_1" fbc:label="G_WP_011001329_1">
+      <fbc:geneProduct metaid="G_WP_011001331_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001331_1" fbc:name="G_WP_011001331_1" fbc:label="G_WP_011001331_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145517,14 +156382,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001336_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001336_1" fbc:name="G_WP_011001336_1" fbc:label="G_WP_011001336_1">
+      <fbc:geneProduct metaid="G_WP_011002148_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002148_1" fbc:name="G_WP_011002148_1" fbc:label="G_WP_011002148_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002148_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002148_1" fbc:name="G_WP_011002148_1" fbc:label="G_WP_011002148_1">
+      <fbc:geneProduct metaid="G_WP_011001336_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001336_1" fbc:name="G_WP_011001336_1" fbc:label="G_WP_011001336_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145538,14 +156403,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000338_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000338_1" fbc:name="G_WP_011000338_1" fbc:label="G_WP_011000338_1">
+      <fbc:geneProduct metaid="G_WP_011000469_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000469_1" fbc:name="G_WP_011000469_1" fbc:label="G_WP_011000469_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000469_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000469_1" fbc:name="G_WP_011000469_1" fbc:label="G_WP_011000469_1">
+      <fbc:geneProduct metaid="G_WP_011000338_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000338_1" fbc:name="G_WP_011000338_1" fbc:label="G_WP_011000338_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145566,14 +156431,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001176_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001176_1" fbc:name="G_WP_011001176_1" fbc:label="G_WP_011001176_1">
+      <fbc:geneProduct metaid="G_WP_011002719_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002719_1" fbc:name="G_WP_011002719_1" fbc:label="G_WP_011002719_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002719_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002719_1" fbc:name="G_WP_011002719_1" fbc:label="G_WP_011002719_1">
+      <fbc:geneProduct metaid="G_WP_011001176_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001176_1" fbc:name="G_WP_011001176_1" fbc:label="G_WP_011001176_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145608,7 +156473,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001527_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001527_1" fbc:name="G_WP_011001527_1" fbc:label="G_WP_011001527_1">
+      <fbc:geneProduct metaid="G_WP_011004730_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004730_1" fbc:name="G_WP_011004730_1" fbc:label="G_WP_011004730_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145622,13 +156487,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004730_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004730_1" fbc:name="G_WP_011004730_1" fbc:label="G_WP_011004730_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011002449_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002449_1" fbc:name="G_WP_011002449_1" fbc:label="G_WP_011002449_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145678,14 +156536,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000244_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000244_1" fbc:name="G_WP_011000244_1" fbc:label="G_WP_011000244_1">
+      <fbc:geneProduct metaid="G_WP_011003430_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003430_1" fbc:name="G_WP_011003430_1" fbc:label="G_WP_011003430_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003430_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003430_1" fbc:name="G_WP_011003430_1" fbc:label="G_WP_011003430_1">
+      <fbc:geneProduct metaid="G_WP_011000244_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000244_1" fbc:name="G_WP_011000244_1" fbc:label="G_WP_011000244_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145699,6 +156557,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001345_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001345_1" fbc:name="G_WP_011001345_1" fbc:label="G_WP_011001345_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011002857_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002857_1" fbc:name="G_WP_011002857_1" fbc:label="G_WP_011002857_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145804,6 +156669,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011002660_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002660_1" fbc:name="G_WP_011002660_1" fbc:label="G_WP_011002660_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011002709_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002709_1" fbc:name="G_WP_011002709_1" fbc:label="G_WP_011002709_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145846,14 +156718,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001276_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001276_1" fbc:name="G_WP_011001276_1" fbc:label="G_WP_011001276_1">
+      <fbc:geneProduct metaid="G_WP_011003533_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003533_1" fbc:name="G_WP_011003533_1" fbc:label="G_WP_011003533_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_010999993_1" sboTerm="SBO:0000243" fbc:id="G_WP_010999993_1" fbc:name="G_WP_010999993_1" fbc:label="G_WP_010999993_1">
+      <fbc:geneProduct metaid="G_WP_011000717_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000717_1" fbc:name="G_WP_011000717_1" fbc:label="G_WP_011000717_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001276_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001276_1" fbc:name="G_WP_011001276_1" fbc:label="G_WP_011001276_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145867,14 +156746,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002161_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002161_1" fbc:name="G_WP_011002161_1" fbc:label="G_WP_011002161_1">
+      <fbc:geneProduct metaid="G_WP_010999993_1" sboTerm="SBO:0000243" fbc:id="G_WP_010999993_1" fbc:name="G_WP_010999993_1" fbc:label="G_WP_010999993_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000857_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000857_1" fbc:name="G_WP_011000857_1" fbc:label="G_WP_011000857_1">
+      <fbc:geneProduct metaid="G_WP_011002161_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002161_1" fbc:name="G_WP_011002161_1" fbc:label="G_WP_011002161_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145888,7 +156767,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001412_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001412_1" fbc:name="G_WP_011001412_1" fbc:label="G_WP_011001412_1">
+      <fbc:geneProduct metaid="G_WP_011000857_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000857_1" fbc:name="G_WP_011000857_1" fbc:label="G_WP_011000857_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145902,7 +156781,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003639_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003639_1" fbc:name="G_WP_011003639_1" fbc:label="G_WP_011003639_1">
+      <fbc:geneProduct metaid="G_WP_011001412_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001412_1" fbc:name="G_WP_011001412_1" fbc:label="G_WP_011001412_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145916,6 +156795,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011003639_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003639_1" fbc:name="G_WP_011003639_1" fbc:label="G_WP_011003639_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011000204_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000204_1" fbc:name="G_WP_011000204_1" fbc:label="G_WP_011000204_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145986,49 +156872,49 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003978_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003978_1" fbc:name="G_WP_011003978_1" fbc:label="G_WP_011003978_1">
+      <fbc:geneProduct metaid="G_WP_011002791_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002791_1" fbc:name="G_WP_011002791_1" fbc:label="G_WP_011002791_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002791_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002791_1" fbc:name="G_WP_011002791_1" fbc:label="G_WP_011002791_1">
+      <fbc:geneProduct metaid="G_WP_011003978_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003978_1" fbc:name="G_WP_011003978_1" fbc:label="G_WP_011003978_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000525_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000525_1" fbc:name="G_WP_011000525_1" fbc:label="G_WP_011000525_1">
+      <fbc:geneProduct metaid="G_WP_011004606_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004606_1" fbc:name="G_WP_011004606_1" fbc:label="G_WP_011004606_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004606_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004606_1" fbc:name="G_WP_011004606_1" fbc:label="G_WP_011004606_1">
+      <fbc:geneProduct metaid="G_WP_011000525_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000525_1" fbc:name="G_WP_011000525_1" fbc:label="G_WP_011000525_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004005_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004005_1" fbc:name="G_WP_011004005_1" fbc:label="G_WP_011004005_1">
+      <fbc:geneProduct metaid="G_WP_011003212_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003212_1" fbc:name="G_WP_011003212_1" fbc:label="G_WP_011003212_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004003_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004003_1" fbc:name="G_WP_011004003_1" fbc:label="G_WP_011004003_1">
+      <fbc:geneProduct metaid="G_WP_011004005_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004005_1" fbc:name="G_WP_011004005_1" fbc:label="G_WP_011004005_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003212_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003212_1" fbc:name="G_WP_011003212_1" fbc:label="G_WP_011003212_1">
+      <fbc:geneProduct metaid="G_WP_011004003_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004003_1" fbc:name="G_WP_011004003_1" fbc:label="G_WP_011004003_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146042,14 +156928,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001378_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001378_1" fbc:name="G_WP_011001378_1" fbc:label="G_WP_011001378_1">
+      <fbc:geneProduct metaid="G_WP_003264280_1" sboTerm="SBO:0000243" fbc:id="G_WP_003264280_1" fbc:name="G_WP_003264280_1" fbc:label="G_WP_003264280_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_003264280_1" sboTerm="SBO:0000243" fbc:id="G_WP_003264280_1" fbc:name="G_WP_003264280_1" fbc:label="G_WP_003264280_1">
+      <fbc:geneProduct metaid="G_WP_011001378_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001378_1" fbc:name="G_WP_011001378_1" fbc:label="G_WP_011001378_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146070,14 +156956,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001195_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001195_1" fbc:name="G_WP_011001195_1" fbc:label="G_WP_011001195_1">
+      <fbc:geneProduct metaid="G_WP_011004365_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004365_1" fbc:name="G_WP_011004365_1" fbc:label="G_WP_011004365_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004365_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004365_1" fbc:name="G_WP_011004365_1" fbc:label="G_WP_011004365_1">
+      <fbc:geneProduct metaid="G_WP_011001195_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001195_1" fbc:name="G_WP_011001195_1" fbc:label="G_WP_011001195_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146091,28 +156977,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004858_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004858_1" fbc:name="G_WP_011004858_1" fbc:label="G_WP_011004858_1">
+      <fbc:geneProduct metaid="G_WP_043876750_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876750_1" fbc:name="G_WP_043876750_1" fbc:label="G_WP_043876750_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876750_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876750_1" fbc:name="G_WP_043876750_1" fbc:label="G_WP_043876750_1">
+      <fbc:geneProduct metaid="G_WP_011004858_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004858_1" fbc:name="G_WP_011004858_1" fbc:label="G_WP_011004858_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001925_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001925_1" fbc:name="G_WP_011001925_1" fbc:label="G_WP_011001925_1">
+      <fbc:geneProduct metaid="G_WP_011001926_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001926_1" fbc:name="G_WP_011001926_1" fbc:label="G_WP_011001926_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001926_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001926_1" fbc:name="G_WP_011001926_1" fbc:label="G_WP_011001926_1">
+      <fbc:geneProduct metaid="G_WP_011001925_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001925_1" fbc:name="G_WP_011001925_1" fbc:label="G_WP_011001925_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146238,14 +157124,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002574_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002574_1" fbc:name="G_WP_011002574_1" fbc:label="G_WP_011002574_1">
+      <fbc:geneProduct metaid="G_WP_020832947_1" sboTerm="SBO:0000243" fbc:id="G_WP_020832947_1" fbc:name="G_WP_020832947_1" fbc:label="G_WP_020832947_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_020832947_1" sboTerm="SBO:0000243" fbc:id="G_WP_020832947_1" fbc:name="G_WP_020832947_1" fbc:label="G_WP_020832947_1">
+      <fbc:geneProduct metaid="G_WP_011002574_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002574_1" fbc:name="G_WP_011002574_1" fbc:label="G_WP_011002574_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146266,6 +157152,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011003287_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003287_1" fbc:name="G_WP_011003287_1" fbc:label="G_WP_011003287_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_043876607_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876607_1" fbc:name="G_WP_043876607_1" fbc:label="G_WP_043876607_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146287,14 +157180,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002288_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002288_1" fbc:name="G_WP_011002288_1" fbc:label="G_WP_011002288_1">
+      <fbc:geneProduct metaid="G_WP_011002159_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002159_1" fbc:name="G_WP_011002159_1" fbc:label="G_WP_011002159_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002159_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002159_1" fbc:name="G_WP_011002159_1" fbc:label="G_WP_011002159_1">
+      <fbc:geneProduct metaid="G_WP_011002288_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002288_1" fbc:name="G_WP_011002288_1" fbc:label="G_WP_011002288_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146315,14 +157208,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000767_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000767_1" fbc:name="G_WP_011000767_1" fbc:label="G_WP_011000767_1">
+      <fbc:geneProduct metaid="G_WP_011001959_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001959_1" fbc:name="G_WP_011001959_1" fbc:label="G_WP_011001959_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001959_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001959_1" fbc:name="G_WP_011001959_1" fbc:label="G_WP_011001959_1">
+      <fbc:geneProduct metaid="G_WP_011000767_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000767_1" fbc:name="G_WP_011000767_1" fbc:label="G_WP_011000767_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146343,28 +157236,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000347_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000347_1" fbc:name="G_WP_011000347_1" fbc:label="G_WP_011000347_1">
+      <fbc:geneProduct metaid="G_WP_011001947_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001947_1" fbc:name="G_WP_011001947_1" fbc:label="G_WP_011001947_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001035_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001035_1" fbc:name="G_WP_011001035_1" fbc:label="G_WP_011001035_1">
+      <fbc:geneProduct metaid="G_WP_011000053_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000053_1" fbc:name="G_WP_011000053_1" fbc:label="G_WP_011000053_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001947_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001947_1" fbc:name="G_WP_011001947_1" fbc:label="G_WP_011001947_1">
+      <fbc:geneProduct metaid="G_WP_011001035_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001035_1" fbc:name="G_WP_011001035_1" fbc:label="G_WP_011001035_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000053_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000053_1" fbc:name="G_WP_011000053_1" fbc:label="G_WP_011000053_1">
+      <fbc:geneProduct metaid="G_WP_011000347_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000347_1" fbc:name="G_WP_011000347_1" fbc:label="G_WP_011000347_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146385,6 +157278,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_043876743_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876743_1" fbc:name="G_WP_043876743_1" fbc:label="G_WP_043876743_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_043876731_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876731_1" fbc:name="G_WP_043876731_1" fbc:label="G_WP_043876731_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146413,6 +157313,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001744_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001744_1" fbc:name="G_WP_011001744_1" fbc:label="G_WP_011001744_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011000236_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000236_1" fbc:name="G_WP_011000236_1" fbc:label="G_WP_011000236_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146448,14 +157355,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002881_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002881_1" fbc:name="G_WP_011002881_1" fbc:label="G_WP_011002881_1">
+      <fbc:geneProduct metaid="G_WP_011000029_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000029_1" fbc:name="G_WP_011000029_1" fbc:label="G_WP_011000029_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000029_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000029_1" fbc:name="G_WP_011000029_1" fbc:label="G_WP_011000029_1">
+      <fbc:geneProduct metaid="G_WP_011002881_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002881_1" fbc:name="G_WP_011002881_1" fbc:label="G_WP_011002881_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146469,14 +157376,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000291_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000291_1" fbc:name="G_WP_011000291_1" fbc:label="G_WP_011000291_1">
+      <fbc:geneProduct metaid="G_WP_011000542_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000542_1" fbc:name="G_WP_011000542_1" fbc:label="G_WP_011000542_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000542_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000542_1" fbc:name="G_WP_011000542_1" fbc:label="G_WP_011000542_1">
+      <fbc:geneProduct metaid="G_WP_011000291_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000291_1" fbc:name="G_WP_011000291_1" fbc:label="G_WP_011000291_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146553,14 +157460,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_019717268_1" sboTerm="SBO:0000243" fbc:id="G_WP_019717268_1" fbc:name="G_WP_019717268_1" fbc:label="G_WP_019717268_1">
+      <fbc:geneProduct metaid="G_WP_011001402_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001402_1" fbc:name="G_WP_011001402_1" fbc:label="G_WP_011001402_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001402_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001402_1" fbc:name="G_WP_011001402_1" fbc:label="G_WP_011001402_1">
+      <fbc:geneProduct metaid="G_WP_019717268_1" sboTerm="SBO:0000243" fbc:id="G_WP_019717268_1" fbc:name="G_WP_019717268_1" fbc:label="G_WP_019717268_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146574,14 +157481,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000873_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000873_1" fbc:name="G_WP_011000873_1" fbc:label="G_WP_011000873_1">
+      <fbc:geneProduct metaid="G_WP_011000874_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000874_1" fbc:name="G_WP_011000874_1" fbc:label="G_WP_011000874_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000874_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000874_1" fbc:name="G_WP_011000874_1" fbc:label="G_WP_011000874_1">
+      <fbc:geneProduct metaid="G_WP_011000873_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000873_1" fbc:name="G_WP_011000873_1" fbc:label="G_WP_011000873_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146602,14 +157509,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876714_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876714_1" fbc:name="G_WP_043876714_1" fbc:label="G_WP_043876714_1">
+      <fbc:geneProduct metaid="G_WP_011002691_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002691_1" fbc:name="G_WP_011002691_1" fbc:label="G_WP_011002691_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002691_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002691_1" fbc:name="G_WP_011002691_1" fbc:label="G_WP_011002691_1">
+      <fbc:geneProduct metaid="G_WP_043876714_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876714_1" fbc:name="G_WP_043876714_1" fbc:label="G_WP_043876714_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146644,42 +157551,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000351_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000351_1" fbc:name="G_WP_011000351_1" fbc:label="G_WP_011000351_1">
+      <fbc:geneProduct metaid="G_WP_011000520_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000520_1" fbc:name="G_WP_011000520_1" fbc:label="G_WP_011000520_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000520_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000520_1" fbc:name="G_WP_011000520_1" fbc:label="G_WP_011000520_1">
+      <fbc:geneProduct metaid="G_WP_011000351_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000351_1" fbc:name="G_WP_011000351_1" fbc:label="G_WP_011000351_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016725833_1" sboTerm="SBO:0000243" fbc:id="G_WP_016725833_1" fbc:name="G_WP_016725833_1" fbc:label="G_WP_016725833_1">
+      <fbc:geneProduct metaid="G_WP_011000996_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000996_1" fbc:name="G_WP_011000996_1" fbc:label="G_WP_011000996_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000996_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000996_1" fbc:name="G_WP_011000996_1" fbc:label="G_WP_011000996_1">
+      <fbc:geneProduct metaid="G_WP_016725833_1" sboTerm="SBO:0000243" fbc:id="G_WP_016725833_1" fbc:name="G_WP_016725833_1" fbc:label="G_WP_016725833_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028860646_1" sboTerm="SBO:0000243" fbc:id="G_WP_028860646_1" fbc:name="G_WP_028860646_1" fbc:label="G_WP_028860646_1">
+      <fbc:geneProduct metaid="G_WP_011000929_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000929_1" fbc:name="G_WP_011000929_1" fbc:label="G_WP_011000929_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876637_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876637_1" fbc:name="G_WP_043876637_1" fbc:label="G_WP_043876637_1">
+      <fbc:geneProduct metaid="G_WP_011000055_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000055_1" fbc:name="G_WP_011000055_1" fbc:label="G_WP_011000055_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146693,21 +157600,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028852812_1" sboTerm="SBO:0000243" fbc:id="G_WP_028852812_1" fbc:name="G_WP_028852812_1" fbc:label="G_WP_028852812_1">
+      <fbc:geneProduct metaid="G_WP_043876637_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876637_1" fbc:name="G_WP_043876637_1" fbc:label="G_WP_043876637_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000929_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000929_1" fbc:name="G_WP_011000929_1" fbc:label="G_WP_011000929_1">
+      <fbc:geneProduct metaid="G_WP_028860646_1" sboTerm="SBO:0000243" fbc:id="G_WP_028860646_1" fbc:name="G_WP_028860646_1" fbc:label="G_WP_028860646_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000055_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000055_1" fbc:name="G_WP_011000055_1" fbc:label="G_WP_011000055_1">
+      <fbc:geneProduct metaid="G_WP_028852812_1" sboTerm="SBO:0000243" fbc:id="G_WP_028852812_1" fbc:name="G_WP_028852812_1" fbc:label="G_WP_028852812_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146756,35 +157663,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002023_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002023_1" fbc:name="G_WP_011002023_1" fbc:label="G_WP_011002023_1">
+      <fbc:geneProduct metaid="G_WP_011003423_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003423_1" fbc:name="G_WP_011003423_1" fbc:label="G_WP_011003423_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003423_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003423_1" fbc:name="G_WP_011003423_1" fbc:label="G_WP_011003423_1">
+      <fbc:geneProduct metaid="G_WP_011004434_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004434_1" fbc:name="G_WP_011004434_1" fbc:label="G_WP_011004434_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001291_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001291_1" fbc:name="G_WP_011001291_1" fbc:label="G_WP_011001291_1">
+      <fbc:geneProduct metaid="G_WP_011002023_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002023_1" fbc:name="G_WP_011002023_1" fbc:label="G_WP_011002023_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016726157_1" sboTerm="SBO:0000243" fbc:id="G_WP_016726157_1" fbc:name="G_WP_016726157_1" fbc:label="G_WP_016726157_1">
+      <fbc:geneProduct metaid="G_WP_011001291_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001291_1" fbc:name="G_WP_011001291_1" fbc:label="G_WP_011001291_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004434_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004434_1" fbc:name="G_WP_011004434_1" fbc:label="G_WP_011004434_1">
+      <fbc:geneProduct metaid="G_WP_016726157_1" sboTerm="SBO:0000243" fbc:id="G_WP_016726157_1" fbc:name="G_WP_016726157_1" fbc:label="G_WP_016726157_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146875,35 +157782,42 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002275_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002275_1" fbc:name="G_WP_011002275_1" fbc:label="G_WP_011002275_1">
+      <fbc:geneProduct metaid="G_WP_011000585_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000585_1" fbc:name="G_WP_011000585_1" fbc:label="G_WP_011000585_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001347_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001347_1" fbc:name="G_WP_011001347_1" fbc:label="G_WP_011001347_1">
+      <fbc:geneProduct metaid="G_WP_011001827_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001827_1" fbc:name="G_WP_011001827_1" fbc:label="G_WP_011001827_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001560_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001560_1" fbc:name="G_WP_011001560_1" fbc:label="G_WP_011001560_1">
+      <fbc:geneProduct metaid="G_WP_011000763_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000763_1" fbc:name="G_WP_011000763_1" fbc:label="G_WP_011000763_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000763_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000763_1" fbc:name="G_WP_011000763_1" fbc:label="G_WP_011000763_1">
+      <fbc:geneProduct metaid="G_WP_011001347_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001347_1" fbc:name="G_WP_011001347_1" fbc:label="G_WP_011001347_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028853082_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853082_1" fbc:name="G_WP_028853082_1" fbc:label="G_WP_028853082_1">
+      <fbc:geneProduct metaid="G_WP_011001560_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001560_1" fbc:name="G_WP_011001560_1" fbc:label="G_WP_011001560_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011001988_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001988_1" fbc:name="G_WP_011001988_1" fbc:label="G_WP_011001988_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146924,7 +157838,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001988_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001988_1" fbc:name="G_WP_011001988_1" fbc:label="G_WP_011001988_1">
+      <fbc:geneProduct metaid="G_WP_011001986_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001986_1" fbc:name="G_WP_011001986_1" fbc:label="G_WP_011001986_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146938,7 +157852,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001986_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001986_1" fbc:name="G_WP_011001986_1" fbc:label="G_WP_011001986_1">
+      <fbc:geneProduct metaid="G_WP_028853082_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853082_1" fbc:name="G_WP_028853082_1" fbc:label="G_WP_028853082_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146987,21 +157901,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002112_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002112_1" fbc:name="G_WP_011002112_1" fbc:label="G_WP_011002112_1">
+      <fbc:geneProduct metaid="G_WP_011002254_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002254_1" fbc:name="G_WP_011002254_1" fbc:label="G_WP_011002254_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002254_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002254_1" fbc:name="G_WP_011002254_1" fbc:label="G_WP_011002254_1">
+      <fbc:geneProduct metaid="G_WP_011000594_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000594_1" fbc:name="G_WP_011000594_1" fbc:label="G_WP_011000594_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000594_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000594_1" fbc:name="G_WP_011000594_1" fbc:label="G_WP_011000594_1">
+      <fbc:geneProduct metaid="G_WP_011002112_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002112_1" fbc:name="G_WP_011002112_1" fbc:label="G_WP_011002112_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147015,14 +157929,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002637_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002637_1" fbc:name="G_WP_011002637_1" fbc:label="G_WP_011002637_1">
+      <fbc:geneProduct metaid="G_WP_019719566_1" sboTerm="SBO:0000243" fbc:id="G_WP_019719566_1" fbc:name="G_WP_019719566_1" fbc:label="G_WP_019719566_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002640_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002640_1" fbc:name="G_WP_011002640_1" fbc:label="G_WP_011002640_1">
+      <fbc:geneProduct metaid="G_WP_011002637_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002637_1" fbc:name="G_WP_011002637_1" fbc:label="G_WP_011002637_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147036,7 +157950,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_019719566_1" sboTerm="SBO:0000243" fbc:id="G_WP_019719566_1" fbc:name="G_WP_019719566_1" fbc:label="G_WP_019719566_1">
+      <fbc:geneProduct metaid="G_WP_011002640_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002640_1" fbc:name="G_WP_011002640_1" fbc:label="G_WP_011002640_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147148,14 +158062,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004269_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004269_1" fbc:name="G_WP_011004269_1" fbc:label="G_WP_011004269_1">
+      <fbc:geneProduct metaid="G_WP_011004266_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004266_1" fbc:name="G_WP_011004266_1" fbc:label="G_WP_011004266_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004266_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004266_1" fbc:name="G_WP_011004266_1" fbc:label="G_WP_011004266_1">
+      <fbc:geneProduct metaid="G_WP_011004269_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004269_1" fbc:name="G_WP_011004269_1" fbc:label="G_WP_011004269_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147176,21 +158090,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003252_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003252_1" fbc:name="G_WP_011003252_1" fbc:label="G_WP_011003252_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000342_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000342_1" fbc:name="G_WP_011000342_1" fbc:label="G_WP_011000342_1">
+      <fbc:geneProduct metaid="G_WP_011000344_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000344_1" fbc:name="G_WP_011000344_1" fbc:label="G_WP_011000344_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028852561_1" sboTerm="SBO:0000243" fbc:id="G_WP_028852561_1" fbc:name="G_WP_028852561_1" fbc:label="G_WP_028852561_1">
+      <fbc:geneProduct metaid="G_WP_011003252_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003252_1" fbc:name="G_WP_011003252_1" fbc:label="G_WP_011003252_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147211,13 +158118,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000344_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000344_1" fbc:name="G_WP_011000344_1" fbc:label="G_WP_011000344_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011004264_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004264_1" fbc:name="G_WP_011004264_1" fbc:label="G_WP_011004264_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147260,56 +158160,56 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003915_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003915_1" fbc:name="G_WP_011003915_1" fbc:label="G_WP_011003915_1">
+      <fbc:geneProduct metaid="G_WP_011002918_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002918_1" fbc:name="G_WP_011002918_1" fbc:label="G_WP_011002918_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876519_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876519_1" fbc:name="G_WP_043876519_1" fbc:label="G_WP_043876519_1">
+      <fbc:geneProduct metaid="G_WP_011001170_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001170_1" fbc:name="G_WP_011001170_1" fbc:label="G_WP_011001170_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001170_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001170_1" fbc:name="G_WP_011001170_1" fbc:label="G_WP_011001170_1">
+      <fbc:geneProduct metaid="G_WP_043876519_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876519_1" fbc:name="G_WP_043876519_1" fbc:label="G_WP_043876519_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004102_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004102_1" fbc:name="G_WP_011004102_1" fbc:label="G_WP_011004102_1">
+      <fbc:geneProduct metaid="G_WP_011001238_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001238_1" fbc:name="G_WP_011001238_1" fbc:label="G_WP_011001238_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000014_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000014_1" fbc:name="G_WP_011000014_1" fbc:label="G_WP_011000014_1">
+      <fbc:geneProduct metaid="G_WP_011003915_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003915_1" fbc:name="G_WP_011003915_1" fbc:label="G_WP_011003915_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001010_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001010_1" fbc:name="G_WP_011001010_1" fbc:label="G_WP_011001010_1">
+      <fbc:geneProduct metaid="G_WP_011004102_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004102_1" fbc:name="G_WP_011004102_1" fbc:label="G_WP_011004102_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002918_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002918_1" fbc:name="G_WP_011002918_1" fbc:label="G_WP_011002918_1">
+      <fbc:geneProduct metaid="G_WP_011000014_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000014_1" fbc:name="G_WP_011000014_1" fbc:label="G_WP_011000014_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001238_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001238_1" fbc:name="G_WP_011001238_1" fbc:label="G_WP_011001238_1">
+      <fbc:geneProduct metaid="G_WP_011001010_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001010_1" fbc:name="G_WP_011001010_1" fbc:label="G_WP_011001010_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147323,6 +158223,13 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011002089_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002089_1" fbc:name="G_WP_011002089_1" fbc:label="G_WP_011002089_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011002124_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002124_1" fbc:name="G_WP_011002124_1" fbc:label="G_WP_011002124_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147365,14 +158272,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001736_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001736_1" fbc:name="G_WP_011001736_1" fbc:label="G_WP_011001736_1">
+      <fbc:geneProduct metaid="G_WP_011001735_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001735_1" fbc:name="G_WP_011001735_1" fbc:label="G_WP_011001735_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001735_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001735_1" fbc:name="G_WP_011001735_1" fbc:label="G_WP_011001735_1">
+      <fbc:geneProduct metaid="G_WP_011001736_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001736_1" fbc:name="G_WP_011001736_1" fbc:label="G_WP_011001736_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147442,14 +158349,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000663_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000663_1" fbc:name="G_WP_011000663_1" fbc:label="G_WP_011000663_1">
+      <fbc:geneProduct metaid="G_WP_011002811_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002811_1" fbc:name="G_WP_011002811_1" fbc:label="G_WP_011002811_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002811_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002811_1" fbc:name="G_WP_011002811_1" fbc:label="G_WP_011002811_1">
+      <fbc:geneProduct metaid="G_WP_011000663_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000663_1" fbc:name="G_WP_011000663_1" fbc:label="G_WP_011000663_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147477,14 +158384,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003234_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003234_1" fbc:name="G_WP_011003234_1" fbc:label="G_WP_011003234_1">
+      <fbc:geneProduct metaid="G_WP_011003788_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003788_1" fbc:name="G_WP_011003788_1" fbc:label="G_WP_011003788_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003788_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003788_1" fbc:name="G_WP_011003788_1" fbc:label="G_WP_011003788_1">
+      <fbc:geneProduct metaid="G_WP_011003234_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003234_1" fbc:name="G_WP_011003234_1" fbc:label="G_WP_011003234_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147547,7 +158454,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003906_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003906_1" fbc:name="G_WP_011003906_1" fbc:label="G_WP_011003906_1">
+      <fbc:geneProduct metaid="G_WP_043876828_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876828_1" fbc:name="G_WP_043876828_1" fbc:label="G_WP_043876828_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147561,21 +158468,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003904_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003904_1" fbc:name="G_WP_011003904_1" fbc:label="G_WP_011003904_1">
+      <fbc:geneProduct metaid="G_WP_011003903_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003903_1" fbc:name="G_WP_011003903_1" fbc:label="G_WP_011003903_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876828_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876828_1" fbc:name="G_WP_043876828_1" fbc:label="G_WP_043876828_1">
+      <fbc:geneProduct metaid="G_WP_011003906_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003906_1" fbc:name="G_WP_011003906_1" fbc:label="G_WP_011003906_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003903_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003903_1" fbc:name="G_WP_011003903_1" fbc:label="G_WP_011003903_1">
+      <fbc:geneProduct metaid="G_WP_011003904_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003904_1" fbc:name="G_WP_011003904_1" fbc:label="G_WP_011003904_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147631,14 +158538,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001733_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001733_1" fbc:name="G_WP_011001733_1" fbc:label="G_WP_011001733_1">
+      <fbc:geneProduct metaid="G_WP_011001492_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001492_1" fbc:name="G_WP_011001492_1" fbc:label="G_WP_011001492_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001492_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001492_1" fbc:name="G_WP_011001492_1" fbc:label="G_WP_011001492_1">
+      <fbc:geneProduct metaid="G_WP_011001733_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001733_1" fbc:name="G_WP_011001733_1" fbc:label="G_WP_011001733_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147673,14 +158580,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000721_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000721_1" fbc:name="G_WP_011000721_1" fbc:label="G_WP_011000721_1">
+      <fbc:geneProduct metaid="G_WP_038938229_1" sboTerm="SBO:0000243" fbc:id="G_WP_038938229_1" fbc:name="G_WP_038938229_1" fbc:label="G_WP_038938229_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_038938229_1" sboTerm="SBO:0000243" fbc:id="G_WP_038938229_1" fbc:name="G_WP_038938229_1" fbc:label="G_WP_038938229_1">
+      <fbc:geneProduct metaid="G_WP_011000721_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000721_1" fbc:name="G_WP_011000721_1" fbc:label="G_WP_011000721_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147729,14 +158636,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000646_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000646_1" fbc:name="G_WP_011000646_1" fbc:label="G_WP_011000646_1">
+      <fbc:geneProduct metaid="G_WP_011001475_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001475_1" fbc:name="G_WP_011001475_1" fbc:label="G_WP_011001475_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001475_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001475_1" fbc:name="G_WP_011001475_1" fbc:label="G_WP_011001475_1">
+      <fbc:geneProduct metaid="G_WP_011000646_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000646_1" fbc:name="G_WP_011000646_1" fbc:label="G_WP_011000646_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147757,6 +158664,20 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011003498_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003498_1" fbc:name="G_WP_011003498_1" fbc:label="G_WP_011003498_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011004804_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004804_1" fbc:name="G_WP_011004804_1" fbc:label="G_WP_011004804_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011000016_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000016_1" fbc:name="G_WP_011000016_1" fbc:label="G_WP_011000016_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147764,28 +158685,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003498_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003498_1" fbc:name="G_WP_011003498_1" fbc:label="G_WP_011003498_1">
+      <fbc:geneProduct metaid="G_WP_011003790_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003790_1" fbc:name="G_WP_011003790_1" fbc:label="G_WP_011003790_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004804_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004804_1" fbc:name="G_WP_011004804_1" fbc:label="G_WP_011004804_1">
+      <fbc:geneProduct metaid="G_WP_011000994_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000994_1" fbc:name="G_WP_011000994_1" fbc:label="G_WP_011000994_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000458_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000458_1" fbc:name="G_WP_011000458_1" fbc:label="G_WP_011000458_1">
+      <fbc:geneProduct metaid="G_WP_011000539_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000539_1" fbc:name="G_WP_011000539_1" fbc:label="G_WP_011000539_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002318_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002318_1" fbc:name="G_WP_011002318_1" fbc:label="G_WP_011002318_1">
+      <fbc:geneProduct metaid="G_WP_011001311_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001311_1" fbc:name="G_WP_011001311_1" fbc:label="G_WP_011001311_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011000849_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000849_1" fbc:name="G_WP_011000849_1" fbc:label="G_WP_011000849_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147799,6 +158727,20 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011000458_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000458_1" fbc:name="G_WP_011000458_1" fbc:label="G_WP_011000458_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_WP_011002318_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002318_1" fbc:name="G_WP_011002318_1" fbc:label="G_WP_011002318_1">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_016723757_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723757_1" fbc:name="G_WP_016723757_1" fbc:label="G_WP_016723757_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147869,35 +158811,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001478_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001478_1" fbc:name="G_WP_011001478_1" fbc:label="G_WP_011001478_1">
+      <fbc:geneProduct metaid="G_WP_011001477_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001477_1" fbc:name="G_WP_011001477_1" fbc:label="G_WP_011001477_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001479_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001479_1" fbc:name="G_WP_011001479_1" fbc:label="G_WP_011001479_1">
+      <fbc:geneProduct metaid="G_WP_011001478_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001478_1" fbc:name="G_WP_011001478_1" fbc:label="G_WP_011001478_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001477_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001477_1" fbc:name="G_WP_011001477_1" fbc:label="G_WP_011001477_1">
+      <fbc:geneProduct metaid="G_WP_011001479_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001479_1" fbc:name="G_WP_011001479_1" fbc:label="G_WP_011001479_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000245_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000245_1" fbc:name="G_WP_011000245_1" fbc:label="G_WP_011000245_1">
+      <fbc:geneProduct metaid="G_WP_011001486_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001486_1" fbc:name="G_WP_011001486_1" fbc:label="G_WP_011001486_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001486_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001486_1" fbc:name="G_WP_011001486_1" fbc:label="G_WP_011001486_1">
+      <fbc:geneProduct metaid="G_WP_011000245_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000245_1" fbc:name="G_WP_011000245_1" fbc:label="G_WP_011000245_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147974,14 +158916,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016722020_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722020_1" fbc:name="G_WP_016722020_1" fbc:label="G_WP_016722020_1">
+      <fbc:geneProduct metaid="G_WP_011002809_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002809_1" fbc:name="G_WP_011002809_1" fbc:label="G_WP_011002809_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002809_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002809_1" fbc:name="G_WP_011002809_1" fbc:label="G_WP_011002809_1">
+      <fbc:geneProduct metaid="G_WP_016722020_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722020_1" fbc:name="G_WP_016722020_1" fbc:label="G_WP_016722020_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148065,14 +159007,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000357_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000357_1" fbc:name="G_WP_011000357_1" fbc:label="G_WP_011000357_1">
+      <fbc:geneProduct metaid="G_WP_011000169_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000169_1" fbc:name="G_WP_011000169_1" fbc:label="G_WP_011000169_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000169_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000169_1" fbc:name="G_WP_011000169_1" fbc:label="G_WP_011000169_1">
+      <fbc:geneProduct metaid="G_WP_011000357_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000357_1" fbc:name="G_WP_011000357_1" fbc:label="G_WP_011000357_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148093,21 +159035,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002536_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002536_1" fbc:name="G_WP_011002536_1" fbc:label="G_WP_011002536_1">
+      <fbc:geneProduct metaid="G_WP_011001582_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001582_1" fbc:name="G_WP_011001582_1" fbc:label="G_WP_011001582_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002087_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002087_1" fbc:name="G_WP_011002087_1" fbc:label="G_WP_011002087_1">
+      <fbc:geneProduct metaid="G_WP_011002536_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002536_1" fbc:name="G_WP_011002536_1" fbc:label="G_WP_011002536_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001582_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001582_1" fbc:name="G_WP_011001582_1" fbc:label="G_WP_011001582_1">
+      <fbc:geneProduct metaid="G_WP_011002087_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002087_1" fbc:name="G_WP_011002087_1" fbc:label="G_WP_011002087_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148142,14 +159084,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_028853175_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853175_1" fbc:name="G_WP_028853175_1" fbc:label="G_WP_028853175_1">
+      <fbc:geneProduct metaid="G_WP_011001671_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001671_1" fbc:name="G_WP_011001671_1" fbc:label="G_WP_011001671_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001671_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001671_1" fbc:name="G_WP_011001671_1" fbc:label="G_WP_011001671_1">
+      <fbc:geneProduct metaid="G_WP_011001670_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001670_1" fbc:name="G_WP_011001670_1" fbc:label="G_WP_011001670_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148163,7 +159105,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001670_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001670_1" fbc:name="G_WP_011001670_1" fbc:label="G_WP_011001670_1">
+      <fbc:geneProduct metaid="G_WP_028853175_1" sboTerm="SBO:0000243" fbc:id="G_WP_028853175_1" fbc:name="G_WP_028853175_1" fbc:label="G_WP_028853175_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148268,21 +159210,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000969_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000969_1" fbc:name="G_WP_011000969_1" fbc:label="G_WP_011000969_1">
+      <fbc:geneProduct metaid="G_WP_011000967_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000967_1" fbc:name="G_WP_011000967_1" fbc:label="G_WP_011000967_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000967_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000967_1" fbc:name="G_WP_011000967_1" fbc:label="G_WP_011000967_1">
+      <fbc:geneProduct metaid="G_WP_011000968_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000968_1" fbc:name="G_WP_011000968_1" fbc:label="G_WP_011000968_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000968_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000968_1" fbc:name="G_WP_011000968_1" fbc:label="G_WP_011000968_1">
+      <fbc:geneProduct metaid="G_WP_011000927_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000927_1" fbc:name="G_WP_011000927_1" fbc:label="G_WP_011000927_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148296,7 +159238,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000927_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000927_1" fbc:name="G_WP_011000927_1" fbc:label="G_WP_011000927_1">
+      <fbc:geneProduct metaid="G_WP_011000969_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000969_1" fbc:name="G_WP_011000969_1" fbc:label="G_WP_011000969_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148359,28 +159301,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004679_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004679_1" fbc:name="G_WP_011004679_1" fbc:label="G_WP_011004679_1">
+      <fbc:geneProduct metaid="G_WP_011003367_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003367_1" fbc:name="G_WP_011003367_1" fbc:label="G_WP_011003367_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003367_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003367_1" fbc:name="G_WP_011003367_1" fbc:label="G_WP_011003367_1">
+      <fbc:geneProduct metaid="G_WP_011001054_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001054_1" fbc:name="G_WP_011001054_1" fbc:label="G_WP_011001054_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003366_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003366_1" fbc:name="G_WP_011003366_1" fbc:label="G_WP_011003366_1">
+      <fbc:geneProduct metaid="G_WP_011004679_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004679_1" fbc:name="G_WP_011004679_1" fbc:label="G_WP_011004679_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001054_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001054_1" fbc:name="G_WP_011001054_1" fbc:label="G_WP_011001054_1">
+      <fbc:geneProduct metaid="G_WP_011003366_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003366_1" fbc:name="G_WP_011003366_1" fbc:label="G_WP_011003366_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148415,7 +159357,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003180_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003180_1" fbc:name="G_WP_011003180_1" fbc:label="G_WP_011003180_1">
+      <fbc:geneProduct metaid="G_WP_011000900_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000900_1" fbc:name="G_WP_011000900_1" fbc:label="G_WP_011000900_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148429,7 +159371,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000900_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000900_1" fbc:name="G_WP_011000900_1" fbc:label="G_WP_011000900_1">
+      <fbc:geneProduct metaid="G_WP_011003180_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003180_1" fbc:name="G_WP_011003180_1" fbc:label="G_WP_011003180_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148506,14 +159448,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_043876842_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876842_1" fbc:name="G_WP_043876842_1" fbc:label="G_WP_043876842_1">
+      <fbc:geneProduct metaid="G_WP_011004585_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004585_1" fbc:name="G_WP_011004585_1" fbc:label="G_WP_011004585_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004585_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004585_1" fbc:name="G_WP_011004585_1" fbc:label="G_WP_011004585_1">
+      <fbc:geneProduct metaid="G_WP_043876842_1" sboTerm="SBO:0000243" fbc:id="G_WP_043876842_1" fbc:name="G_WP_043876842_1" fbc:label="G_WP_043876842_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148569,28 +159511,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000876_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000876_1" fbc:name="G_WP_011000876_1" fbc:label="G_WP_011000876_1">
+      <fbc:geneProduct metaid="G_WP_011001511_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001511_1" fbc:name="G_WP_011001511_1" fbc:label="G_WP_011001511_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001511_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001511_1" fbc:name="G_WP_011001511_1" fbc:label="G_WP_011001511_1">
+      <fbc:geneProduct metaid="G_WP_011000876_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000876_1" fbc:name="G_WP_011000876_1" fbc:label="G_WP_011000876_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016722983_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722983_1" fbc:name="G_WP_016722983_1" fbc:label="G_WP_016722983_1">
+      <fbc:geneProduct metaid="G_WP_011001930_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001930_1" fbc:name="G_WP_011001930_1" fbc:label="G_WP_011001930_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001930_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001930_1" fbc:name="G_WP_011001930_1" fbc:label="G_WP_011001930_1">
+      <fbc:geneProduct metaid="G_WP_016722983_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722983_1" fbc:name="G_WP_016722983_1" fbc:label="G_WP_016722983_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148618,14 +159560,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002345_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002345_1" fbc:name="G_WP_011002345_1" fbc:label="G_WP_011002345_1">
+      <fbc:geneProduct metaid="G_WP_011001800_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001800_1" fbc:name="G_WP_011001800_1" fbc:label="G_WP_011001800_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001800_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001800_1" fbc:name="G_WP_011001800_1" fbc:label="G_WP_011001800_1">
+      <fbc:geneProduct metaid="G_WP_011002345_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002345_1" fbc:name="G_WP_011002345_1" fbc:label="G_WP_011002345_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148653,13 +159595,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002089_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002089_1" fbc:name="G_WP_011002089_1" fbc:label="G_WP_011002089_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_WP_011002446_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002446_1" fbc:name="G_WP_011002446_1" fbc:label="G_WP_011002446_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148716,21 +159651,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000314_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000314_1" fbc:name="G_WP_011000314_1" fbc:label="G_WP_011000314_1">
+      <fbc:geneProduct metaid="G_WP_011001598_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001598_1" fbc:name="G_WP_011001598_1" fbc:label="G_WP_011001598_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001598_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001598_1" fbc:name="G_WP_011001598_1" fbc:label="G_WP_011001598_1">
+      <fbc:geneProduct metaid="G_WP_011000314_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000314_1" fbc:name="G_WP_011000314_1" fbc:label="G_WP_011000314_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000728_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000728_1" fbc:name="G_WP_011000728_1" fbc:label="G_WP_011000728_1">
+      <fbc:geneProduct metaid="G_WP_011002675_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002675_1" fbc:name="G_WP_011002675_1" fbc:label="G_WP_011002675_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148744,7 +159679,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011002675_1" sboTerm="SBO:0000243" fbc:id="G_WP_011002675_1" fbc:name="G_WP_011002675_1" fbc:label="G_WP_011002675_1">
+      <fbc:geneProduct metaid="G_WP_011000728_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000728_1" fbc:name="G_WP_011000728_1" fbc:label="G_WP_011000728_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148772,7 +159707,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003757_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003757_1" fbc:name="G_WP_011003757_1" fbc:label="G_WP_011003757_1">
+      <fbc:geneProduct metaid="G_WP_011000657_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000657_1" fbc:name="G_WP_011000657_1" fbc:label="G_WP_011000657_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148786,7 +159721,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000657_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000657_1" fbc:name="G_WP_011000657_1" fbc:label="G_WP_011000657_1">
+      <fbc:geneProduct metaid="G_WP_011003757_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003757_1" fbc:name="G_WP_011003757_1" fbc:label="G_WP_011003757_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148835,14 +159770,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001917_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001917_1" fbc:name="G_WP_011001917_1" fbc:label="G_WP_011001917_1">
+      <fbc:geneProduct metaid="G_WP_016722990_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722990_1" fbc:name="G_WP_016722990_1" fbc:label="G_WP_016722990_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016722990_1" sboTerm="SBO:0000243" fbc:id="G_WP_016722990_1" fbc:name="G_WP_016722990_1" fbc:label="G_WP_016722990_1">
+      <fbc:geneProduct metaid="G_WP_011001917_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001917_1" fbc:name="G_WP_011001917_1" fbc:label="G_WP_011001917_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148926,14 +159861,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003032_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003032_1" fbc:name="G_WP_011003032_1" fbc:label="G_WP_011003032_1">
+      <fbc:geneProduct metaid="G_WP_011000656_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000656_1" fbc:name="G_WP_011000656_1" fbc:label="G_WP_011000656_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000656_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000656_1" fbc:name="G_WP_011000656_1" fbc:label="G_WP_011000656_1">
+      <fbc:geneProduct metaid="G_WP_011003032_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003032_1" fbc:name="G_WP_011003032_1" fbc:label="G_WP_011003032_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149017,7 +159952,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001964_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001964_1" fbc:name="G_WP_011001964_1" fbc:label="G_WP_011001964_1">
+      <fbc:geneProduct metaid="G_WP_011001967_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001967_1" fbc:name="G_WP_011001967_1" fbc:label="G_WP_011001967_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149031,35 +159966,35 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001971_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001971_1" fbc:name="G_WP_011001971_1" fbc:label="G_WP_011001971_1">
+      <fbc:geneProduct metaid="G_WP_011001970_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001970_1" fbc:name="G_WP_011001970_1" fbc:label="G_WP_011001970_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001967_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001967_1" fbc:name="G_WP_011001967_1" fbc:label="G_WP_011001967_1">
+      <fbc:geneProduct metaid="G_WP_011001964_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001964_1" fbc:name="G_WP_011001964_1" fbc:label="G_WP_011001964_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001966_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001966_1" fbc:name="G_WP_011001966_1" fbc:label="G_WP_011001966_1">
+      <fbc:geneProduct metaid="G_WP_011001969_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001969_1" fbc:name="G_WP_011001969_1" fbc:label="G_WP_011001969_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001970_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001970_1" fbc:name="G_WP_011001970_1" fbc:label="G_WP_011001970_1">
+      <fbc:geneProduct metaid="G_WP_011001971_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001971_1" fbc:name="G_WP_011001971_1" fbc:label="G_WP_011001971_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001969_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001969_1" fbc:name="G_WP_011001969_1" fbc:label="G_WP_011001969_1">
+      <fbc:geneProduct metaid="G_WP_011001966_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001966_1" fbc:name="G_WP_011001966_1" fbc:label="G_WP_011001966_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149080,21 +160015,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001973_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001973_1" fbc:name="G_WP_011001973_1" fbc:label="G_WP_011001973_1">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001976_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001976_1" fbc:name="G_WP_011001976_1" fbc:label="G_WP_011001976_1">
+      <fbc:geneProduct metaid="G_WP_011003223_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003223_1" fbc:name="G_WP_011003223_1" fbc:label="G_WP_011003223_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001974_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001974_1" fbc:name="G_WP_011001974_1" fbc:label="G_WP_011001974_1">
+      <fbc:geneProduct metaid="G_WP_011001973_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001973_1" fbc:name="G_WP_011001973_1" fbc:label="G_WP_011001973_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149108,14 +160036,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003223_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003223_1" fbc:name="G_WP_011003223_1" fbc:label="G_WP_011003223_1">
+      <fbc:geneProduct metaid="G_WP_011001974_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001974_1" fbc:name="G_WP_011001974_1" fbc:label="G_WP_011001974_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000504_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000504_1" fbc:name="G_WP_011000504_1" fbc:label="G_WP_011000504_1">
+      <fbc:geneProduct metaid="G_WP_011001976_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001976_1" fbc:name="G_WP_011001976_1" fbc:label="G_WP_011001976_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149157,14 +160085,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003536_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003536_1" fbc:name="G_WP_011003536_1" fbc:label="G_WP_011003536_1">
+      <fbc:geneProduct metaid="G_WP_011003537_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003537_1" fbc:name="G_WP_011003537_1" fbc:label="G_WP_011003537_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011003537_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003537_1" fbc:name="G_WP_011003537_1" fbc:label="G_WP_011003537_1">
+      <fbc:geneProduct metaid="G_WP_011003536_1" sboTerm="SBO:0000243" fbc:id="G_WP_011003536_1" fbc:name="G_WP_011003536_1" fbc:label="G_WP_011003536_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149185,21 +160113,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004878_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004878_1" fbc:name="G_WP_011004878_1" fbc:label="G_WP_011004878_1">
+      <fbc:geneProduct metaid="G_WP_011004880_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004880_1" fbc:name="G_WP_011004880_1" fbc:label="G_WP_011004880_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004880_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004880_1" fbc:name="G_WP_011004880_1" fbc:label="G_WP_011004880_1">
+      <fbc:geneProduct metaid="G_WP_011004879_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004879_1" fbc:name="G_WP_011004879_1" fbc:label="G_WP_011004879_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011004879_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004879_1" fbc:name="G_WP_011004879_1" fbc:label="G_WP_011004879_1">
+      <fbc:geneProduct metaid="G_WP_011004878_1" sboTerm="SBO:0000243" fbc:id="G_WP_011004878_1" fbc:name="G_WP_011004878_1" fbc:label="G_WP_011004878_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149213,28 +160141,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_016723260_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723260_1" fbc:name="G_WP_016723260_1" fbc:label="G_WP_016723260_1">
+      <fbc:geneProduct metaid="G_WP_011001240_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001240_1" fbc:name="G_WP_011001240_1" fbc:label="G_WP_011001240_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001240_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001240_1" fbc:name="G_WP_011001240_1" fbc:label="G_WP_011001240_1">
+      <fbc:geneProduct metaid="G_WP_011001235_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001235_1" fbc:name="G_WP_011001235_1" fbc:label="G_WP_011001235_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011000629_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000629_1" fbc:name="G_WP_011000629_1" fbc:label="G_WP_011000629_1">
+      <fbc:geneProduct metaid="G_WP_016723260_1" sboTerm="SBO:0000243" fbc:id="G_WP_016723260_1" fbc:name="G_WP_016723260_1" fbc:label="G_WP_016723260_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_WP_011001235_1" sboTerm="SBO:0000243" fbc:id="G_WP_011001235_1" fbc:name="G_WP_011001235_1" fbc:label="G_WP_011001235_1">
+      <fbc:geneProduct metaid="G_WP_011000629_1" sboTerm="SBO:0000243" fbc:id="G_WP_011000629_1" fbc:name="G_WP_011000629_1" fbc:label="G_WP_011000629_1">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
diff --git a/carveme/data/benchmark/models/sone.xml b/carveme/data/benchmark/models/sone.xml
index a9ee2be..484d687 100644
--- a/carveme/data/benchmark/models/sone.xml
+++ b/carveme/data/benchmark/models/sone.xml
@@ -3,7 +3,7 @@
   <model metaid="sone" id="sone" fbc:strict="true">
     <notes>
       <html xmlns="http://www.w3.org/1999/xhtml">
-        <p>Description: This model was built with CarveMe version 1.4.1</p>
+        <p>Description: This model was built with CarveMe version 1.5.0</p>
       </html>
     </notes>
     <listOfCompartments>
@@ -964,29 +964,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_23dhacoa_c" sboTerm="SBO:0000247" id="M_23dhacoa_c" name="2,3-dehydroadipyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C27H37N7O19P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C27H37N7O19P3S</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_23dhacoa_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:67261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:68471"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM9750"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/ZFXICKRXPZTFPB-FZHFFJAKSA-I"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_23dhdp_c" sboTerm="SBO:0000247" id="M_23dhdp_c" name="2,3-Dihydrodipicolinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C7H5NO4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2189,42 +2166,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_2kmb_c" sboTerm="SBO:0000247" id="M_2kmb_c" name="2-keto-4-methylthiobutyrate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H7O3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H7O3S</p>
-            <p>CHARGE: -1</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_2kmb_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1237122"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01180"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1902"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20451"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22458"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43720"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63388"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13210"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01060170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-479"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM276"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SXFSQZDSUWACKX-UHFFFAOYSA-M"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00869"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_2m35mdntha_c" sboTerm="SBO:0000247" id="M_2m35mdntha_c" name="N  2 methyl 3 5 dinitrophenyl  4 methyl 3 5 dinitroaniline" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="HN">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -2639,31 +2580,6 @@
           </rdf:RDF>
         </annotation>
       </species>
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C29H38N7O18P3S</p>
-            <p>SBOTerm: SBO:0000247</p>
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-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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       <species metaid="M_2p4c2me_c" sboTerm="SBO:0000247" id="M_2p4c2me_c" name="2-phospho-4-(cytidine 5&apos;-diphospho)-2-C-methyl-D-erythritol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C14H22N3O17P3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -3389,38 +3305,6 @@
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-      <species metaid="M_3hadpcoa_c" sboTerm="SBO:0000247" id="M_3hadpcoa_c" name="(3S)-3-Hydroxyadipyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-5" fbc:chemicalFormula="C27H39N7O20P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C27H39N7O20P3S</p>
-            <p>CHARGE: -5</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-HYDROXYADIPYL-COA"/>
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-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/OTEACGAEDCIMBS-NOTSHUFBSA-I"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd09844"/>
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-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_3hbcoa__R_c" sboTerm="SBO:0000247" id="M_3hbcoa__R_c" name="(R)-3-Hydroxybutyryl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C25H38N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -5187,32 +5071,6 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
-      <species metaid="M_3oxdhscoa_c" sboTerm="SBO:0000247" id="M_3oxdhscoa_c" name="3-oxo-5,6-dehydrosuberyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C29H39N7O20P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C29H39N7O20P3S</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_3oxdhscoa_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C19945"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63253"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63255"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/IFFFDKYRRUVOFP-HURBHMQQSA-I"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050236"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2364"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3852"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd21184"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_3oxptcoa_c" sboTerm="SBO:0000247" id="M_3oxptcoa_c" name="3 Oxopentanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C26H38N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6127,6 +5985,42 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_4met2obut_c" sboTerm="SBO:0000247" id="M_4met2obut_c" name="4-Methylthio-2-oxobutanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C5H8O3S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C5H8O3S</p>
+            <p>SBOTerm: SBO:0000247</p>
+            <p>CHARGE: 0.0</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_4met2obut_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-1237122"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01180"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1902"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22458"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:33574"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:63388"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB13210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA01060170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD-479"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM276"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/SXFSQZDSUWACKX-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00869"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_4mhetz_c" sboTerm="SBO:0000247" id="M_4mhetz_c" name="4-Methyl-5-(2-hydroxyethyl)-thiazole" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C6H9NOS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6607,39 +6501,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_5d4dglcr_c" sboTerm="SBO:0000247" id="M_5d4dglcr_c" name="5 Dehydro 4 deoxy D glucarate C6H6O7" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H6O7">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C6H6O7</p>
-            <p>CHARGE: -2</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_5d4dglcr_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00679"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:12117"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16369"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20561"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35453"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35454"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:42819"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:43704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:5-KETO-4-DEOXY-D-GLUCARATE"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM854"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/QUURPCHWPQNNGL-ZAFYKAAXSA-L"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00515"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_5drib_c" sboTerm="SBO:0000247" id="M_5drib_c" name="5&apos;-deoxyribose" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -6789,64 +6650,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_5mcsn_e" sboTerm="SBO:0000247" id="M_5mcsn_e" name="5-Methylcytosine" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H7N3O">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H7N3O</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_5mcsn_e">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02376"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:85013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02894"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LRSASMSXMSNRBT-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3509"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01587"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
-      <species metaid="M_5mcsn_p" sboTerm="SBO:0000247" id="M_5mcsn_p" name="5-Methylcytosine" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C5H7N3O">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H7N3O</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_5mcsn_p">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02376"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:2094"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:85013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB02894"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/LRSASMSXMSNRBT-UHFFFAOYSA-N"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CPD0-2018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM3509"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01587"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_5mdr1p_c" sboTerm="SBO:0000247" id="M_5mdr1p_c" name="5-Methylthio-5-deoxy-D-ribose 1-phosphate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-2" fbc:chemicalFormula="C6H11O7PS">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -8327,6 +8130,40 @@
           </rdf:RDF>
         </sbml:annotation>
       </species>
+      <species metaid="M_R_3hpocta_e" sboTerm="SBO:0000247" id="M_R_3hpocta_e" name=" 3 Hydroxy 8 phenyloctanoic acid" compartment="C_e" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H15O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H15O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3hpocta_e">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
+      <species metaid="M_R_3hpocta_p" sboTerm="SBO:0000247" id="M_R_3hpocta_p" name=" 3 Hydroxy 8 phenyloctanoic acid" compartment="C_p" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C14H15O3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C14H15O3</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#M_R_3hpocta_p">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+      </species>
       <species metaid="M_R_3hpoctacoa_c" sboTerm="SBO:0000247" id="M_R_3hpoctacoa_c" name=" 3 Hydroxyphenyloctanoyl CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C35H46N7O18P3S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -15445,6 +15282,40 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_co_p" sboTerm="SBO:0000247" id="M_co_p" name="Carbon monoxide" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="CO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: CO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_co_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-189385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:13281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:23013"/>
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@@ -23696,44 +23567,6 @@
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@@ -31150,46 +30983,6 @@
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-        <notes>
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-            <p>FORMULA: C12H22O11</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
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         <notes>
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@@ -31983,60 +31776,6 @@
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
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-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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         <notes>
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@@ -32068,68 +31807,6 @@
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C5H11NO3S</p>
-            <p>CHARGE: 0</p>
-            <p>SBOTerm: SBO:0000247</p>
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       <species metaid="M_mg2_c" sboTerm="SBO:0000247" id="M_mg2_c" name="Magnesium" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="Mg">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -33582,6 +33259,114 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_nac_c" sboTerm="SBO:0000247" id="M_nac_c" name="Nicotinate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nac_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-197230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14650"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15940"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NIACINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM274"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PVNIIMVLHYAWGP-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00218"/>
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+              </bqbiol:is>
+            </rdf:Description>
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+        </annotation>
+      </species>
+      <species metaid="M_nac_e" sboTerm="SBO:0000247" id="M_nac_e" name="Nicotinate" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#M_nac_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-197230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14650"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NIACINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM274"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PVNIIMVLHYAWGP-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00218"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
+      <species metaid="M_nac_p" sboTerm="SBO:0000247" id="M_nac_p" name="Nicotinate" compartment="C_p" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C6H4NO2">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C6H4NO2</p>
+            <p>CHARGE: -1</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_nac_p">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-197230"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-8869604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14650"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15940"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:22851"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:32544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB01488"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NIACINE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM274"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/PVNIIMVLHYAWGP-UHFFFAOYSA-M"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00218"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_nad_c" sboTerm="SBO:0000247" id="M_nad_c" name="Nicotinamide adenine dinucleotide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -34533,6 +34318,36 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_no_c" sboTerm="SBO:0000247" id="M_no_c" name="Nitric oxide" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="NO">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: NO</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_no_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00533"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:14657"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:16480"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:44452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00074"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB03378"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:NITRIC-OXIDE"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM228"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/MWUXSHHQAYIFBG-UHFFFAOYSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_no_e" sboTerm="SBO:0000247" id="M_no_e" name="Nitric oxide" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="NO">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -35890,37 +35705,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_oxadpcoa_c" sboTerm="SBO:0000247" id="M_oxadpcoa_c" name="3-Oxoadipyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-5" fbc:chemicalFormula="C27H37N7O20P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C27H37N7O20P3S</p>
-            <p>CHARGE: -5</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_oxadpcoa_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02232"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:11872"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:15490"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:1632"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20164"/>
-                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB60378"/>
-                  <rdf:li rdf:resource="http://identifiers.org/lipidmaps/LMFA07050237"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3-KETO-ADIPYL-COA"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1264"/>
-                  <rdf:li rdf:resource="https://identifiers.org/inchikey/VKKKAAPGXHWXOO-BIEWRJSYSA-I"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd01507"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_oxptn_c" sboTerm="SBO:0000247" id="M_oxptn_c" name="5-Oxopentanoate" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-1" fbc:chemicalFormula="C5H7O3">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -40420,6 +40204,25 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_ptd1ino160_c" sboTerm="SBO:0000247" id="M_ptd1ino160_c" name="Phosphatidyl 1D myo inositol" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C41H78O13P">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C41H78O13P</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_ptd1ino160_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM12646"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_ptrc_c" sboTerm="SBO:0000247" id="M_ptrc_c" name="Putrescine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="2" fbc:chemicalFormula="C4H14N2">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41095,26 +40898,6 @@
           </rdf:RDF>
         </annotation>
       </species>
-      <species metaid="M_rephaccoa_c" sboTerm="SBO:0000247" id="M_rephaccoa_c" name="Ring 1,2-epoxyphenylacetyl-CoA" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C29H38N7O18P3S">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>FORMULA: C29H38N7O18P3S</p>
-            <p>CHARGE: -4</p>
-            <p>SBOTerm: SBO:0000247</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#M_rephaccoa_c">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM148501"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </species>
       <species metaid="M_rhcys_c" sboTerm="SBO:0000247" id="M_rhcys_c" name="S-Ribosyl-L-homocysteine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C9H17NO6S">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -41379,6 +41162,31 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_s_e" sboTerm="SBO:0000247" id="M_s_e" name="Sulfur" compartment="C_e" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="S">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: S</p>
+            <p>CHARGE: 0</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_s_e">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:26833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D00024"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:Elemental-Sulfur"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM89"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/NINIDFKCEFEMDL-UHFFFAOYSA-N"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_salchs4_c" sboTerm="SBO:0000247" id="M_salchs4_c" name="Salmochelin-S4" compartment="C_c" hasOnlySubstanceUnits="true" fbc:chemicalFormula="C42H46N3O25">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -47650,6 +47458,35 @@
           </rdf:RDF>
         </annotation>
       </species>
+      <species metaid="M_xtp_c" sboTerm="SBO:0000247" id="M_xtp_c" name="XTP" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O15P3">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>FORMULA: C10H11N4O15P3</p>
+            <p>CHARGE: -4</p>
+            <p>SBOTerm: SBO:0000247</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#M_xtp_c">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ALL-2509848"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00700"/>
+                  <rdf:li rdf:resource="https://identifiers.org/inchikey/CAEFEWVYEZABLA-UUOKFMHZSA-J"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:10049"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:59885"/>
+                  <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:61314"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00293"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XTP"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00530"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </species>
       <species metaid="M_xtsn_c" sboTerm="SBO:0000247" id="M_xtsn_c" name="Xanthosine" compartment="C_c" hasOnlySubstanceUnits="true" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49432,41 +49269,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_3OXCOAT" sboTerm="SBO:0000176" id="R_3OXCOAT" name="3-oxoadipyl-CoA thiolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_3OXCOAT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19481"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19482"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19483"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/19484"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.16"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.174"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-3641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00598"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_3PEPTabcpp" sboTerm="SBO:0000185" id="R_3PEPTabcpp" name="Tripeptide (LalaDgluMdap) transport via ABC system (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -49566,43 +49368,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_4ABUTD" sboTerm="SBO:0000176" id="R_4ABUTD" name="4-Aminobutyraldehyde:NAD+ oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_4ABUTD">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30803"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30805"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/30806"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14209"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01459"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_4abutn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_4abut_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_4ABUTabcpp" sboTerm="SBO:0000185" id="R_4ABUTabcpp" name="GABA transport via ABC system  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -50042,33 +49807,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3956"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_AAAN" sboTerm="SBO:0000176" id="R_AAAN" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_AAAN">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_AACPS1" sboTerm="SBO:0000176" id="R_AACPS1" name="Acyl-[acyl-carrier-protein] synthetase (n-C14:0)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51021,6 +50759,38 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO2136"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACALDt" sboTerm="SBO:0000185" id="R_ACALDt" name="Acetaldehyde reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDt">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACALDtex" sboTerm="SBO:0000185" id="R_ACALDtex" name="Acetaldehyde transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -51058,6 +50828,38 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ACALDtpp" sboTerm="SBO:0000185" id="R_ACALDtpp" name="Acetaldehyde reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95212"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-449872"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08033"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09700"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13212"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_acald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_acald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ACCOAC" sboTerm="SBO:0000176" id="R_ACCOAC" name="Acetyl-CoA carboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -53200,7 +53002,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACODA" sboTerm="SBO:0000176" id="R_ACODA" name="Acetylornithine deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACOADH2" sboTerm="SBO:0000176" id="R_ACOADH2" name="Acyl CoA dehydrogenase  isobutyryl CoA " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -53208,58 +53010,59 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACODA">
+            <rdf:Description rdf:about="#R_ACOADH2">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15941"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15942"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15943"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/15944"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.14"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.16"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETYLORNDEACET-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95377"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00669"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01923"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_acorn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ibcoa_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_2mp2coa_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_ACONCt4pp" sboTerm="SBO:0000185" id="R_ACONCt4pp" name="Citrate transport via sodium symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACONCtex" sboTerm="SBO:0000185" id="R_ACONCtex" name="Cisaconitat transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
           </html>
         </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ACONCt4pp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ACONCtex">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95381"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12788"/>
+                </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </sbml:annotation>
+        </annotation>
         <listOfReactants>
-          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_na1_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_na1_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_SO0312"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ACONCtex" sboTerm="SBO:0000185" id="R_ACONCtex" name="Cisaconitat transport via diffusion extracellular to periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ACONCtupp" sboTerm="SBO:0000185" id="R_ACONCtupp" name="Cisaconitate transport periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -53267,7 +53070,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ACONCtex">
+            <rdf:Description rdf:about="#R_ACONCtupp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95381"/>
@@ -53278,18 +53081,11 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_acon_C_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_acon_C_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_acon_C_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_SO0312"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
-          </fbc:or>
-        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_ACONT" sboTerm="SBO:0000176" id="R_ACONT" name="Aconitate hydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -57480,32 +57276,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ALAS" sboTerm="SBO:0000176" id="R_ALAS" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_ALAS">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_succoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_5aop_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ALATA_D2" sboTerm="SBO:0000176" id="R_ALATA_D2" name="D-alanine transaminase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -58549,35 +58319,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ALDD31" sboTerm="SBO:0000176" id="R_ALDD31" name="Aminoacetaldehyde oxidation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_ALDD31">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05735"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_ALDD3y" sboTerm="SBO:0000176" id="R_ALDD3y" name="Aldehyde dehydrogenase (propanal, NADP)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60309,6 +60050,42 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO1276"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ARAT" sboTerm="SBO:0000176" id="R_ARAT" name="Methionine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ARAT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.57"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25796"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25797"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25798"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95923"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05108"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_4met2obut_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ARBT6Pt" sboTerm="SBO:0000185" id="R_ARBT6Pt" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -60446,7 +60223,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_ARD" sboTerm="SBO:0000176" id="R_ARD" name="1;2-dihydroxy-3-keto-5-methylthiopentene dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_ARD_1" sboTerm="SBO:0000176" id="R_ARD_1" name="Acireductone dioxygenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -60454,7 +60231,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_ARD">
+            <rdf:Description rdf:about="#R_ARD_1">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.54"/>
@@ -60493,9 +60270,9 @@
           <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2kmb_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_4met2obut_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_for_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_ARGDC" sboTerm="SBO:0000176" id="R_ARGDC" name="Arginine decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -60836,6 +60613,28 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ARSR" sboTerm="SBO:0000176" id="R_ARSR" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_ARSR">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_actn__R_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_actn__S_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_ARUH" sboTerm="SBO:0000176" id="R_ARUH" name="L Arginine pyruvate transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -62114,6 +61913,45 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ATPHs" sboTerm="SBO:0000176" id="R_ATPHs" name="ATP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ATPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.17"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATP-DEAMINASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96130"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00064"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_ATPPRT" sboTerm="SBO:0000176" id="R_ATPPRT" name="ATP phosphoribosyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -62782,6 +62620,9 @@
         <listOfProducts>
           <speciesReference species="M_bz_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_BZt1pp" sboTerm="SBO:0000185" id="R_BZt1pp" name="Benzoate transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -63610,6 +63451,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO0046"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CDPPT160" sboTerm="SBO:0000176" id="R_CDPPT160" name="CDPPT160" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CDPPT160">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96560"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_cdpdhdecg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_cmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptd1ino160_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_CELLS" sboTerm="SBO:0000185" id="R_CELLS" name="Cellulose synthase  UDP forming " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64889,6 +64757,96 @@
           <fbc:geneProductRef fbc:geneProduct="G_SOA0006"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2t" sboTerm="SBO:0000185" id="R_CO2t" name="CO2 transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_CO2tex" sboTerm="SBO:0000185" id="R_CO2tex" name="CO2 transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -64982,9 +64940,100 @@
             <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3969"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CO2tpp" sboTerm="SBO:0000185" id="R_CO2tpp" name="CO2 transporter via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CO2tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-1237042"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-1247645"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-1247649"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1237069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-1247645"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05467"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08237"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09706"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09821"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09860"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09876"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co2_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_COBALT2abcpp" sboTerm="SBO:0000185" id="R_COBALT2abcpp" name="Cobalt (Co+2) ABC transporter (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -65245,7 +65294,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_COt" sboTerm="SBO:0000185" id="R_COt" name="CO transporter via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_COt_1" sboTerm="SBO:0000185" id="R_COt_1" name="Co transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -65253,7 +65302,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_COt">
+            <rdf:Description rdf:about="#R_COt_1">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
@@ -65265,11 +65314,14 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_co_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_CPK1" sboTerm="SBO:0000176" id="R_CPK1" name="Adenylate kinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -66881,7 +66933,7 @@
           <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_CYTB_B2" sboTerm="SBO:0000185" id="R_CYTB_B2" name="Menaquinol oxidase  71 protons " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_CYTB_B3" sboTerm="SBO:0000185" id="R_CYTB_B3" name="Menauinol oxidase  72 protons " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -66889,23 +66941,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_CYTB_B2">
+            <rdf:Description rdf:about="#R_CYTB_B3">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97037"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97038"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
           <speciesReference species="M_mql7_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_o2_c" stoichiometry="0.5" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_e" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_e" stoichiometry="4" constant="true"/>
           <speciesReference species="M_mqn7_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -67315,6 +67367,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO2018"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_CYTOM" sboTerm="SBO:0000176" id="R_CYTOM" name="Cytosine 5 methyltransferase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_CYTOM">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.37"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09888"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_amet_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_csn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_5mcsn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ahcys_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_Clt" sboTerm="SBO:0000185" id="R_Clt" name="Major Facilitator(MFS) TCDB:2.A.1.14.6" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -67495,6 +67576,35 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO1865"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_Cotpp" sboTerm="SBO:0000185" id="R_Cotpp" name="Co transport via diffusion (periplasm to cytosol)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_Cotpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-556"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96863"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_co_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_co_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_Cuabc" sboTerm="SBO:0000185" id="R_Cuabc" name="Copper transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -68471,6 +68581,9 @@
           <speciesReference species="M_ditp_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DB4PS" sboTerm="SBO:0000176" id="R_DB4PS" name="3,4-Dihydroxy-2-butanone-4-phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -69267,43 +69380,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHACOAH" sboTerm="SBO:0000176" id="R_DHACOAH" name="2,3-dehydroadipyl-CoA hydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_DHACOAH">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34863"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34864"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34865"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34866"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.17"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97357"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_23dhacoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_3hadpcoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_SO0021"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO1680"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3088"/>
-          </fbc:or>
-        </fbc:geneProductAssociation>
-      </reaction>
       <reaction metaid="R_DHAD1" sboTerm="SBO:0000176" id="R_DHAD1" name="Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -69637,6 +69713,9 @@
           <speciesReference species="M_glx_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DHMPTR" sboTerm="SBO:0000176" id="R_DHMPTR" name="Dihydromonapterin reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -70056,7 +70135,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_DHPD" sboTerm="SBO:0000176" id="R_DHPD" name="Dihydropyrimidinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_DHPM1" sboTerm="SBO:0000176" id="R_DHPM1" name="Dihydropyrimidinase (5,6-dihydrouracil)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -70064,7 +70143,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_DHPD">
+            <rdf:Description rdf:about="#R_DHPM1">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/16121"/>
@@ -70237,6 +70316,9 @@
         <listOfProducts>
           <speciesReference species="M_mdhdhf_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_DHQS" sboTerm="SBO:0000176" id="R_DHQS" name="3-dehydroquinate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -73161,6 +73243,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_ETOHtrpp" sboTerm="SBO:0000185" id="R_ETOHtrpp" name="Ethanol reversible transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ETOHtrpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35269"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/35270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-546"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08428"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09764"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_etoh_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_etoh_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FACOAE100" sboTerm="SBO:0000176" id="R_FACOAE100" name="Fatty-acid-CoA thioesterase (decanoate)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -74863,30 +74980,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3664"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FADE233" sboTerm="SBO:0000176" id="R_FADE233" name="R02661" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_FADE233">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_fad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ibcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_2mp2coa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_fadh2_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_FADRx" sboTerm="SBO:0000176" id="R_FADRx" name="FAD reductase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75145,6 +75238,35 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_FALDtpp" sboTerm="SBO:0000185" id="R_FALDtpp" name="Formaldehyde transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_FALDtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99238"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08461"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08462"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_fald_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fald_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FALGTHLs" sboTerm="SBO:0000176" id="R_FALGTHLs" name="Formaldehyde glutathione ligase (spontaneous)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -75178,6 +75300,9 @@
         <listOfProducts>
           <speciesReference species="M_hmgth_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FAS120" sboTerm="SBO:0000176" id="R_FAS120" name="Fatty acid synthase  n C120 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -76037,6 +76162,32 @@
           <speciesReference species="M_pyovd_kt_p" stoichiometry="2" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_FE3PYOVDL2" sboTerm="SBO:0000176" id="R_FE3PYOVDL2" name="Ferripyoverdine complex formation  P putida KT2440 specific " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_FE3PYOVDL2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_fe3_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_fe3pyovd_kt_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_FE3Ri" sboTerm="SBO:0000176" id="R_FE3Ri" name="Fe(III) reduction" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -76766,7 +76917,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO1111"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_FESD1s" sboTerm="SBO:0000176" id="R_FESD1s" name="Iron-sulfur cluster damage (peroxide, spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_FESD2s" sboTerm="SBO:0000176" id="R_FESD2s" name="Iron-sulfur cluster damage (nitrous oxide, spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -76774,10 +76925,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_FESD1s">
+            <rdf:Description rdf:about="#R_FESD2s">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99586"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -76785,14 +76936,18 @@
         </annotation>
         <listOfReactants>
           <speciesReference species="M_4fe4s_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_no_c" stoichiometry="2" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_3fe4s_c" stoichiometry="2" constant="true"/>
           <speciesReference species="M_fe3_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_FESR" sboTerm="SBO:0000176" id="R_FESR" name="Iron-sulfur cluster repair" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -79787,7 +79942,7 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GDPMNH" sboTerm="SBO:0000176" id="R_GDPMNH" name="GDP-mannose mannosyl hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_GDPMNP" sboTerm="SBO:0000176" id="R_GDPMNP" name="GDP-mannose phyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -79795,15 +79950,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GDPMNH">
+            <rdf:Description rdf:about="#R_GDPMNP">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28102"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28104"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28105"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100091"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27978"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27980"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27981"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5108"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00881"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00639"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -79814,9 +79973,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_gdp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_man_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_gmp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_man1p_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_GDPTPDP" sboTerm="SBO:0000176" id="R_GDPTPDP" name="Guanosine 3&apos;-diphosphate 5&apos;-triphosphate 3&apos;-diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -80597,72 +80756,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO1933"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLCRAL_1" sboTerm="SBO:0000176" id="R_GLCRAL_1" name="5 dehydro 4 deoxyglucarate aldolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GLCRAL_1">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27726"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27727"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27728"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:KDGALDOL-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02754"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01990"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_5d4dglcr_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_2h3opp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_GLCRD_1" sboTerm="SBO:0000176" id="R_GLCRD_1" name="Glucarate dehydratase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_GLCRD_1">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14574"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14575"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/14576"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.40"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUCARDEHYDRA-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01989"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_5d4dglcr_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLCS3_1" sboTerm="SBO:0000176" id="R_GLCS3_1" name="Glycogen synthase  ADPGlc   4 units " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -80720,32 +80813,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GLCURDH" sboTerm="SBO:0000176" id="R_GLCURDH" name="Glucoronate dehydrogenase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_GLCURDH">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glcr_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GLCURt2rpp" sboTerm="SBO:0000185" id="R_GLCURt2rpp" name="D-glucuronate transport via proton symport, reversible (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82122,6 +82189,40 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLXCBL" sboTerm="SBO:0000176" id="R_GLXCBL" name="Glyoxalate carboligase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_GLXCBL">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/10139"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.47"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLYOCARBOLIG-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100303"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00010"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glx_c" stoichiometry="2" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2h3opp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_co2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_GLYALDDr" sboTerm="SBO:0000176" id="R_GLYALDDr" name="D-Glyceraldehyde dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -82925,6 +83026,97 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GLYCtpp" sboTerm="SBO:0000185" id="R_GLYCtpp" name="Glycerol transport via channel (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08658"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_glyc_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glyc_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GLYDHDA" sboTerm="SBO:0000176" id="R_GLYDHDA" name="Gylcine dehydrogenase (deamidating)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -83906,33 +84098,6 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_GOR1" sboTerm="SBO:0000176" id="R_GOR1" name="Glycine oxidoreductase (NADH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-              </bqbiol:is>
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-          </rdf:RDF>
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-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
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-        <listOfProducts>
-          <speciesReference species="M_gly_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GPDDA1" sboTerm="SBO:0000176" id="R_GPDDA1" name="Glycerophosphodiester phosphodiesterase (Glycerophosphocholine)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -84219,32 +84384,6 @@
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         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_GSEALD" sboTerm="SBO:0000176" id="R_GSEALD" name="GSEALD" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_0_bound">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
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-                <rdf:Bag/>
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-          </rdf:RDF>
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-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
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-        <listOfProducts>
-          <speciesReference species="M_glu1sa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_GSNK" sboTerm="SBO:0000176" id="R_GSNK" name="Guanosine kinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85066,6 +85205,37 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3455"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_GTPHs" sboTerm="SBO:0000176" id="R_GTPHs" name="GTP amine hydrolysis (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_GTPHs">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100459"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08679"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_gtp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_GUACYC" sboTerm="SBO:0000176" id="R_GUACYC" name="Guanylate cyclase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85381,9 +85551,157 @@
             <fbc:geneProductRef fbc:geneProduct="G_SO1821"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_H2Ot" sboTerm="SBO:0000185" id="R_H2Ot" name="H2O transport via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_H2Ot">
+              <bqbiol:is>
+                <rdf:Bag>
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+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29670"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-547"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432065"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-432067"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-445714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-507870"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05319"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08687"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09643"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09812"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_H2Otex" sboTerm="SBO:0000185" id="R_H2Otex" name="H2O transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -85537,6 +85855,7 @@
             <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3969"/>
             <fbc:geneProductRef fbc:geneProduct="G_SOA0114"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -85684,7 +86003,41 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_SO1307"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_SO1307"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_H2St1" sboTerm="SBO:0000185" id="R_H2St1" name="H2s transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_H2St1">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-310"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08689"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08690"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10541"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2s_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h2s_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_H2Stex" sboTerm="SBO:0000185" id="R_H2Stex" name="H2s transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -85785,6 +86138,9 @@
         <listOfProducts>
           <speciesReference species="M_h2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_HACD1" sboTerm="SBO:0000176" id="R_HACD1" name="3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -87333,32 +87689,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO4382"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_HADPCOADH" sboTerm="SBO:0000176" id="R_HADPCOADH" name="3-hydroxyadipyl-CoA dehydrogenase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_HADPCOADH">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100554"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12773"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_3hadpcoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_oxadpcoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_HAMR" sboTerm="SBO:0000176" id="R_HAMR" name="Hydroxylamine reductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -87777,7 +88107,10 @@
           <speciesReference species="M_hco3_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_SO2474"/>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_SO2474"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_HCYSMT" sboTerm="SBO:0000176" id="R_HCYSMT" name="Homocysteine S-methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -90762,6 +91095,41 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_INOSTO" sboTerm="SBO:0000176" id="R_INOSTO" name="Myo-Inositol:oxygen oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_INOSTO">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.99.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/23699"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MYO-INOSITOL-OXYGENASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00880"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_inost_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glcur_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_INOST_Et" sboTerm="SBO:0000185" id="R_INOST_Et" name="Myo-Inositol transport (transport mechanism unknown - evidence from biolog data)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -91763,30 +92131,6 @@
           <speciesReference species="M_phpcoa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_KAT14" sboTerm="SBO:0000176" id="R_KAT14" name="Acetyl CoA C acyltransferase  3 oxophenyloctanoyl CoA " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_KAT14">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_3opoctacoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phxacoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_KAT15" sboTerm="SBO:0000176" id="R_KAT15" name="Acetyl CoA C acyltransferase  3 oxophenylheptanoyl CoA " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -94984,44 +95328,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO2213"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MALTabc" sboTerm="SBO:0000185" id="R_MALTabc" name="Maltose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_MALTabc">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22132#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22133#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22134#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/22135#1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.19"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.6.3.19-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-16-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08867"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_atp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_malt_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_malt_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MALt2_3pp" sboTerm="SBO:0000185" id="R_MALt2_3pp" name="Malate transport via proton symport (3 H) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -95627,52 +95933,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3291"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_MCSNtex" sboTerm="SBO:0000185" id="R_MCSNtex" name="Cytosine transport in via diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MCSNtex">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_5mcsn_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_5mcsn_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_MCSNtpp" sboTerm="SBO:0000185" id="R_MCSNtpp" name="Cytosine transport in via proton symport  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_MCSNtpp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_5mcsn_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_5mcsn_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_MCTP1App" sboTerm="SBO:0000176" id="R_MCTP1App" name="Murein crosslinking transpeptidase 1A:(A2pm-&gt;D-ala) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -96436,6 +96696,7 @@
             <fbc:geneProductRef fbc:geneProduct="G_SO0312"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3969"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -96468,6 +96729,9 @@
         <listOfProducts>
           <speciesReference species="M_meoh_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
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@@ -96762,7 +97026,7 @@
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+      <reaction metaid="R_METOX1s" sboTerm="SBO:0000176" id="R_METOX1s" name="Methionine oxidation (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -96770,163 +97034,96 @@
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-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101479"/>
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09942"/>
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-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
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         <listOfProducts>
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-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
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-        <notes>
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-            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
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+      <reaction metaid="R_METOX2s" sboTerm="SBO:0000176" id="R_METOX2s" name="Methionine oxidation 2 (spontaneous)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
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+            <rdf:Description rdf:about="#R_METOX2s">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-7188"/>
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-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_metsox_R__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
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         <listOfProducts>
-          <speciesReference species="M_adp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_metsox_R__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_METSOX2tex" sboTerm="SBO:0000185" id="R_METSOX2tex" name="L-methionine R-oxide diffusion (extracellular)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_METS" sboTerm="SBO:0000176" id="R_METS" name="Methionine synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
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+            <rdf:Description rdf:about="#R_METS">
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         <listOfReactants>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_5mthf_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_metsox_R__L_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_thf_c" stoichiometry="1" constant="true"/>
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         <fbc:geneProductAssociation>
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-            <fbc:geneProductRef fbc:geneProduct="G_SO1821"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO0818"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO1030"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -97535,6 +97732,9 @@
           <speciesReference species="M_mthgxl_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MGt2pp" sboTerm="SBO:0000185" id="R_MGt2pp" name="Magnesium transport in via proton symport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -97726,32 +97926,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO2260"/>
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       </reaction>
-      <reaction metaid="R_MI1PS" sboTerm="SBO:0000176" id="R_MI1PS" name="Myo Inositol 1 phosphate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
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-        <listOfProducts>
-          <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/>
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-      </reaction>
       <reaction metaid="R_MICITDr" sboTerm="SBO:0000176" id="R_MICITDr" name="2-methylisocitrate dehydratase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
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@@ -99411,6 +99585,9 @@
         <listOfProducts>
           <speciesReference species="M_mththf_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_MTRI" sboTerm="SBO:0000176" id="R_MTRI" name="5-methylthioribose-1-phosphate isomerase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -99731,6 +99908,9 @@
         <listOfProducts>
           <speciesReference species="M_n2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_N2tex" sboTerm="SBO:0000185" id="R_N2tex" name="Nitrogen exchange, diffusion (extra-organism to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -99785,7 +99965,7 @@
           <speciesReference species="M_n2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_NADDP" sboTerm="SBO:0000176" id="R_NADDP" name="NAD diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NACODA" sboTerm="SBO:0000176" id="R_NACODA" name="N-acetylornithine deacetylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -99793,80 +99973,76 @@
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+            <rdf:Description rdf:about="#R_NACODA">
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-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00076"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/30503"/>
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                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
+          <speciesReference species="M_acg5sa_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
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-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nmn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/>
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-            <fbc:geneProductRef fbc:geneProduct="G_SO0464"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO2896"/>
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-        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NADH10" sboTerm="SBO:0000176" id="R_NADH10" name="NADH dehydrogenase (menaquinone-8 &amp; 0 protons)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NACtex" sboTerm="SBO:0000185" id="R_NACtex" name="Nicotinic acid transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
+            <p>SBOTerm: SBO:0000185</p>
           </html>
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-          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/>
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         <listOfProducts>
-          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/>
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           <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3517"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO4295"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO0312"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO1821"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
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+      <reaction metaid="R_NACtpp" sboTerm="SBO:0000185" id="R_NACtpp" name="Nicotinic acid uptake (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -99874,189 +100050,118 @@
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+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08969"/>
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-          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nac_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_h_p" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_NADDP" sboTerm="SBO:0000176" id="R_NADDP" name="NAD diphosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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+            <rdf:Description rdf:about="#R_NADDP">
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           <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/>
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+        <listOfProducts>
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-              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
-              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
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+      <reaction metaid="R_NADH10" sboTerm="SBO:0000176" id="R_NADH10" name="NADH dehydrogenase (menaquinone-8 &amp; 0 protons)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
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           <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
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-              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
-              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
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+            <fbc:geneProductRef fbc:geneProduct="G_SO3517"/>
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-      <reaction metaid="R_NADH18pp" sboTerm="SBO:0000185" id="R_NADH18pp" name="NADH dehydrogenase (demethylmenaquinone-8 &amp; 3 protons) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NADH16pp" sboTerm="SBO:0000185" id="R_NADH16pp" name="NADH dehydrogenase (ubiquinone-8 &amp; 3 protons) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -100064,24 +100169,214 @@
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         <listOfReactants>
-          <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
           <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2dmmql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_p" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1012"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1012"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NADH17pp" sboTerm="SBO:0000185" id="R_NADH17pp" name="NADH dehydrogenase (menaquinone-8 &amp; 3 protons) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NADH17pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.6.5.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08973"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_p" stoichiometry="3" constant="true"/>
+          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+            <fbc:and>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1009"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1010"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1011"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1012"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1013"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1014"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1015"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1016"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1017"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1018"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1019"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1020"/>
+              <fbc:geneProductRef fbc:geneProduct="G_SO1021"/>
+            </fbc:and>
+          </fbc:or>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NADH18pp" sboTerm="SBO:0000185" id="R_NADH18pp" name="NADH dehydrogenase (demethylmenaquinone-8 &amp; 3 protons) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NADH18pp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.6.5.3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08974"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_2dmmq8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="4" constant="true"/>
+          <speciesReference species="M_nadh_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_2dmmql8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_p" stoichiometry="3" constant="true"/>
           <speciesReference species="M_nad_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
@@ -100275,6 +100570,9 @@
         <listOfProducts>
           <speciesReference species="M_nadhx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADHNQR" sboTerm="SBO:0000185" id="R_NADHNQR" name="NADH: quinone oxidoreductas, NQR-type" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -100547,6 +100845,9 @@
         <listOfProducts>
           <speciesReference species="M_nadphx__R_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NADPHQR2" sboTerm="SBO:0000176" id="R_NADPHQR2" name="NADPH Quinone Reductase (Ubiquinone-8)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -100750,6 +101051,54 @@
           </fbc:and>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NAPRT" sboTerm="SBO:0000176" id="R_NAPRT" name="NAPRTase (rev)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NAPRT">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/13396"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.11"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-197186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01265"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nac_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_prpp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nicrnt_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_NAabc" sboTerm="SBO:0000185" id="R_NAabc" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -101748,87 +102097,36 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO4198"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4t" sboTerm="SBO:0000185" id="R_NH4t" name="Ammonia reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NH3c" sboTerm="SBO:0000176" id="R_NH3c" name="Ammomnium proton dissociation" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
+            <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NH4t">
+            <rdf:Description rdf:about="#R_NH3c">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11811"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101948"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh3_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_SO0760"/>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_NH4t3pp" sboTerm="SBO:0000185" id="R_NH4t3pp" name="Ammonia transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000185</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_NH4t3pp">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-        <fbc:geneProductAssociation>
-          <fbc:geneProductRef fbc:geneProduct="G_SO3747"/>
-        </fbc:geneProductAssociation>
-      </reaction>
-      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_NH4t" sboTerm="SBO:0000185" id="R_NH4t" name="Ammonia reversible transport" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -101836,7 +102134,87 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_NH4tex">
+            <rdf:Description rdf:about="#R_NH4t">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nh4_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_SO0760"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4t3pp" sboTerm="SBO:0000185" id="R_NH4t3pp" name="Ammonia transport out via proton antiport" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_NH4t3pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_SO3747"/>
+        </fbc:geneProductAssociation>
+      </reaction>
+      <reaction metaid="R_NH4tex" sboTerm="SBO:0000185" id="R_NH4tex" name="Ammonia transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
@@ -101884,9 +102262,63 @@
             <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO3969"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NH4tpp" sboTerm="SBO:0000185" id="R_NH4tpp" name="Ammonia reversible transport (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NH4tpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn05466"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn08987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn09835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn13364"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_nh4_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_nh4_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NH4tpp_1" sboTerm="SBO:0000185" id="R_NH4tpp_1" name="Ammonia ireversible transport (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -102757,6 +103189,9 @@
         <listOfProducts>
           <speciesReference species="M_novbcn_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_NOVBCNtpp" sboTerm="SBO:0000185" id="R_NOVBCNtpp" name="Novobiocin transport via TolC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -102823,6 +103258,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NOtpp" sboTerm="SBO:0000185" id="R_NOtpp" name="NO transport (diffusion)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NOtpp">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101998"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_no_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_no_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NPHS" sboTerm="SBO:0000176" id="R_NPHS" name="Naphthoate synthase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104221,6 +104683,62 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3358"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP11" sboTerm="SBO:0000176" id="R_NTPP11" name="Nucleoside triphosphate pyrophosphorylase (xtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP11">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28610"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28611"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/28613"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.66"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1603"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102051"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01962"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xmp_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_SO3358"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPP2" sboTerm="SBO:0000176" id="R_NTPP2" name="Nucleoside triphosphate pyrophosphorylase (gtp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104518,6 +105036,63 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_NTPP9" sboTerm="SBO:0000176" id="R_NTPP9" name="Nucleoside triphosphate pyrophosphorylase (itp)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_NTPP9">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/29402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.-"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-2509827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00720"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00514"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_itp_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_imp_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ppi_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_SO3358"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_NTPTP1" sboTerm="SBO:0000176" id="R_NTPTP1" name="Nucleoside triphosphate tripolyhydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -104764,7 +105339,7 @@
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         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_O2t" sboTerm="SBO:0000185" id="R_O2t" name="O2 transport  diffusion " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -104772,7 +105347,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_O2t">
+            <rdf:Description rdf:about="#R_O2tex">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
@@ -104791,10 +105366,19 @@
           <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:or>
+            <fbc:geneProductRef fbc:geneProduct="G_SO0312"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO1821"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
+            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+          </fbc:or>
+        </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_O2tex" sboTerm="SBO:0000185" id="R_O2tex" name="Oxygen transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_O2tpp" sboTerm="SBO:0000185" id="R_O2tpp" name="O2 transport via diffusion (periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -104802,7 +105386,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_O2tex">
+            <rdf:Description rdf:about="#R_O2tpp">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/>
@@ -104818,18 +105402,13 @@
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_o2_e" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_o2_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
         <fbc:geneProductAssociation>
-          <fbc:or>
-            <fbc:geneProductRef fbc:geneProduct="G_SO0312"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO1821"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3060"/>
-            <fbc:geneProductRef fbc:geneProduct="G_SO3896"/>
-          </fbc:or>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
         </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_OAADC" sboTerm="SBO:0000176" id="R_OAADC" name="Oxaloacetate decarboxylase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -105411,6 +105990,7 @@
           <fbc:or>
             <fbc:geneProductRef fbc:geneProduct="G_SO1538"/>
             <fbc:geneProductRef fbc:geneProduct="G_SO4235"/>
+            <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
@@ -105799,70 +106379,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO4255"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_OXCOAHDH" sboTerm="SBO:0000176" id="R_OXCOAHDH" name="Oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_OXCOAHDH">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34876"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-6511"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102240"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_2oxpaccoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h2o_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_3oxdhscoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
-      <reaction metaid="R_OXDHCOAT" sboTerm="SBO:0000176" id="R_OXDHCOAT" name="3-oxo-5,6-dehydrosuberyl-CoA thiolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_OXDHCOAT">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.223"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34441"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/34442"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102241"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_3oxdhscoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_coa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_23dhacoa_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_accoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_OXFOtex" sboTerm="SBO:0000185" id="R_OXFOtex" name="Oxalate:Formate antiporter (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -106405,35 +106921,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SOA0049"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PACCOAE" sboTerm="SBO:0000176" id="R_PACCOAE" name="Ring 1,2-phenylacetyl-CoA epoxidase (NADPH)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PACCOAE">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102314"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_o2_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_phaccoa_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_rephaccoa_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PACOAT" sboTerm="SBO:0000176" id="R_PACOAT" name="Phenylacetyl-CoA thioesterase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -108293,28 +108780,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3547"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PGI1c" sboTerm="SBO:0000176" id="R_PGI1c" name="Glucose-6-phosphateisomerase,glycosome" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_PGI1c">
-              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
-                <rdf:Bag/>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </sbml:annotation>
-        <listOfReactants>
-          <speciesReference species="M_g6p_A_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_f6p_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PGK" sboTerm="SBO:0000176" id="R_PGK" name="Phosphoglycerate kinase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110295,6 +110760,33 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3542"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PLCD" sboTerm="SBO:0000176" id="R_PLCD" name="PLCD" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_PLCD">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102900"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ptd1ino160_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_12dgr160_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_mi1p__D_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PLIPA1E160pp" sboTerm="SBO:0000176" id="R_PLIPA1E160pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110405,33 +110897,6 @@
           <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PLIPA1E181pp" sboTerm="SBO:0000176" id="R_PLIPA1E181pp" name="Phospholipase A1 (phosphatidylethanolamine, n-C18:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PLIPA1E181pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102980"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_2agpe181_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PLIPA1G160pp" sboTerm="SBO:0000176" id="R_PLIPA1G160pp" name="Phospholipase A1 (phosphatidylglycerol, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110511,33 +110976,6 @@
           <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PLIPA1G181pp" sboTerm="SBO:0000176" id="R_PLIPA1G181pp" name="Phospholipase A1 (phosphatidylglycerol, n-C18:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PLIPA1G181pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102987"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_2agpg181_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PLIPA2A160pp" sboTerm="SBO:0000176" id="R_PLIPA2A160pp" name="Phospholipase A2 (phosphatidate, n-C16:0) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -110594,23 +111032,21 @@
           <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PLIPA2E181pp" sboTerm="SBO:0000176" id="R_PLIPA2E181pp" name="Phospholipase A2 (phosphatidylethanolamine, n-C18:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PLIPA2E181d11pp" sboTerm="SBO:0000176" id="R_PLIPA2E181d11pp" name="Phospholipase A2  phosphatidylethanolamine  n C181   periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#R_PLIPA2E181pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103002"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PLIPA2E181d11pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pe181_p" stoichiometry="1" constant="true"/>
@@ -110618,26 +111054,24 @@
         <listOfProducts>
           <speciesReference species="M_1agpe181_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_PLIPA2G181pp" sboTerm="SBO:0000176" id="R_PLIPA2G181pp" name="Phospholipase A2 (phosphatidylglycerol, n-C18:1) (periplasm)" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_PLIPA2G181d11pp" sboTerm="SBO:0000176" id="R_PLIPA2G181d11pp" name="Phospholipase A2  phosphatidylglycerol  n C181   periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PLIPA2G181pp">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103009"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PLIPA2G181d11pp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
           <speciesReference species="M_h2o_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_pg181_p" stoichiometry="1" constant="true"/>
@@ -110645,7 +111079,7 @@
         <listOfProducts>
           <speciesReference species="M_1agpg181_p" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_p" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_ocdcea_p" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_vacc_p" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_PMANM" sboTerm="SBO:0000176" id="R_PMANM" name="Phosphomannomutase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
@@ -113107,6 +113541,30 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO0313"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_PTRCTA2" sboTerm="SBO:0000176" id="R_PTRCTA2" name="Putrescine Transaminase  pyruvate " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_PTRCTA2">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_ptrc_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_pyr_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_4abutn_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_ala__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_PTRCabc" sboTerm="SBO:0000185" id="R_PTRCabc" name="Putrescine transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -113551,41 +114009,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO1221"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_PUNP7" sboTerm="SBO:0000176" id="R_PUNP7" name="Purine-nucleoside phosphorylase (Xanthosine)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_PUNP7">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.-"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27639"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27640"/>
-                  <rdf:li rdf:resource="http://identifiers.org/rhea/27641"/>
-                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XANTHOSINEPHOSPHORY-RXN"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02297"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01649"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_pi_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_xtsn_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_r1p_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_PUTA3" sboTerm="SBO:0000176" id="R_PUTA3" name="PUTA3" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -114629,28 +115052,27 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_REPHACCOAI" sboTerm="SBO:0000176" id="R_REPHACCOAI" name="Ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RECOAH6" sboTerm="SBO:0000176" id="R_RECOAH6" name="3 hydroxyacyl Coa dehydratase   3R  3 hydroxytetradecanoyl CoA " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_REPHACCOAI">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103993"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RECOAH6">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_rephaccoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_2oxpaccoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_td2coa_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
       <reaction metaid="R_RHACOAE100" sboTerm="SBO:0000176" id="R_RHACOAE100" name="R hydroxy acyl CoA thioesterase  C100 " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
@@ -115278,36 +115700,32 @@
           <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_RHACOAR140" sboTerm="SBO:0000176" id="R_RHACOAR140" name=" 3R  3 Hydroxyacyl CoANADP oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHACOARP100" sboTerm="SBO:0000176" id="R_RHACOARP100" name=" R  Hydroxyacyl CoANADP oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_RHACOAR140">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.36"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn12769"/>
-                </rdf:Bag>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHACOARP100">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
-        </annotation>
+        </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_3otdcoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3opdecacoa_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_R_3hmrscoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
-      <reaction metaid="R_RHACOARP100" sboTerm="SBO:0000176" id="R_RHACOARP100" name=" R  Hydroxyacyl CoANADP oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_RHACOARP80" sboTerm="SBO:0000176" id="R_RHACOARP80" name=" R  Hydroxyacyl CoANADP oxidoreductase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000176</p>
@@ -115315,7 +115733,7 @@
         </notes>
         <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-            <rdf:Description rdf:about="#R_RHACOARP100">
+            <rdf:Description rdf:about="#R_RHACOARP80">
               <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
                 <rdf:Bag/>
               </bqbiol:is>
@@ -115323,12 +115741,12 @@
           </rdf:RDF>
         </sbml:annotation>
         <listOfReactants>
-          <speciesReference species="M_3opdecacoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_3opoctacoa_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nadph_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
-          <speciesReference species="M_R_3hpdecacoa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_R_3hpoctacoa_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_nadp_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -115376,6 +115794,50 @@
           <speciesReference species="M_R_3hpdeca_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_RHAP80tex" sboTerm="SBO:0000185" id="R_RHAP80tex" name="R 3 Hydroxyphenyl acid transport diffusion C80  extracellularperiplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHAP80tex">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hpocta_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hpocta_e" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
+      <reaction metaid="R_RHAP80tpp" sboTerm="SBO:0000185" id="R_RHAP80tpp" name="R 3 Hydroxyphenyl acid transport diffusion C80   periplasm " reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <sbml:annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
+            <rdf:Description rdf:about="#R_RHAP80tpp">
+              <bqbiol:is xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
+                <rdf:Bag/>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </sbml:annotation>
+        <listOfReactants>
+          <speciesReference species="M_R_3hpocta_p" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_R_3hpocta_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_RHCCE" sboTerm="SBO:0000176" id="R_RHCCE" name="S-ribosylhomocysteine cleavage enzyme" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -115413,34 +115875,6 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO1101"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_RHCYS" sboTerm="SBO:0000176" id="R_RHCYS" name="5 deoxyribos 5 ylhomocysteinase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_RHCYS">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00955"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_rhcys_c" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_hcys__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_RIBabc" sboTerm="SBO:0000185" id="R_RIBabc" name="D-ribose transport via ABC system" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -119743,6 +120177,33 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_St" sboTerm="SBO:0000185" id="R_St" name="Sulfur diffusion" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000185</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_St">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138845"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_s_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
+      </reaction>
       <reaction metaid="R_TALA" sboTerm="SBO:0000176" id="R_TALA" name="Transaldolase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -120009,6 +120470,9 @@
         <listOfProducts>
           <speciesReference species="M_tcynt_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TDP" sboTerm="SBO:0000176" id="R_TDP" name="Thiamin pyrophosphatase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -120088,7 +120552,7 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO2801"/>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_TETDHpp1" sboTerm="SBO:0000185" id="R_TETDHpp1" name="Tetrathionate Dehydrogenase menaquinone 8  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+      <reaction metaid="R_TETDHpp3" sboTerm="SBO:0000185" id="R_TETDHpp3" name="Tetrathionate Dehydrogenase ubiquinone 8  periplasm " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000185</p>
@@ -120096,22 +120560,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_TETDHpp1">
+            <rdf:Description rdf:about="#R_TETDHpp3">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104779"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104781"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
         <listOfReactants>
-          <speciesReference species="M_mql8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_q8h2_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_tet_p" stoichiometry="1" constant="true"/>
         </listOfReactants>
         <listOfProducts>
           <speciesReference species="M_h_p" stoichiometry="2" constant="true"/>
-          <speciesReference species="M_mqn8_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_q8_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_tsul_p" stoichiometry="2" constant="true"/>
         </listOfProducts>
       </reaction>
@@ -121412,6 +121876,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TNTHAC2" sboTerm="SBO:0000176" id="R_TNTHAC2" name="2 4 6 dinitrotoluene meisenheimer dihydrideTNT derived hydroxylamines condensation" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -121437,6 +121904,9 @@
           <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
           <speciesReference species="M_no2_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
+        <fbc:geneProductAssociation>
+          <fbc:geneProductRef fbc:geneProduct="G_spontaneous"/>
+        </fbc:geneProductAssociation>
       </reaction>
       <reaction metaid="R_TNTR1" sboTerm="SBO:0000176" id="R_TNTR1" name="TNT nitroreductase 4 Hydroxylamino 2 6 dinitrotoluene " reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
@@ -124380,34 +124850,6 @@
           </fbc:or>
         </fbc:geneProductAssociation>
       </reaction>
-      <reaction metaid="R_UNK2" sboTerm="SBO:0000176" id="R_UNK2" name="2-keto-4-methylthiobutyrate transamination" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000176</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#R_UNK2">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105128"/>
-                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn10944"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-        <listOfReactants>
-          <speciesReference species="M_2kmb_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_gln__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_h_c" stoichiometry="2" constant="true"/>
-        </listOfReactants>
-        <listOfProducts>
-          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
-          <speciesReference species="M_met__L_c" stoichiometry="1" constant="true"/>
-        </listOfProducts>
-      </reaction>
       <reaction metaid="R_UPP3MT" sboTerm="SBO:0000176" id="R_UPP3MT" name="Uroporphyrinogen methyltransferase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -125735,6 +126177,40 @@
           <fbc:geneProductRef fbc:geneProduct="G_SO3803"/>
         </fbc:geneProductAssociation>
       </reaction>
+      <reaction metaid="R_XTSNH" sboTerm="SBO:0000176" id="R_XTSNH" name="Xanthosine hydrolase" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_XTSNH">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/27997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105245"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn01545"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_h2o_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xtsn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_rib__D_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_xan_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
       <reaction metaid="R_XTSNtex" sboTerm="SBO:0000185" id="R_XTSNtex" name="Xanthosine transport via diffusion (extracellular to periplasm)" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -126364,6 +126840,16 @@
           <speciesReference species="M_4hba_c" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_sink_aacald_c" sboTerm="SBO:0000632" id="R_sink_aacald_c" name="R_sink_aacald_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000632</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_aacald_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_sink_amob_c" sboTerm="SBO:0000632" id="R_sink_amob_c" name="R_sink_amob_c" reversible="false" fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -126574,16 +127060,6 @@
           <speciesReference species="M_5drib_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_5mcsn_e" sboTerm="SBO:0000627" id="R_EX_5mcsn_e" name="R_EX_5mcsn_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_5mcsn_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_6atha_e" sboTerm="SBO:0000627" id="R_EX_6atha_e" name="R_EX_6atha_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -126644,6 +127120,16 @@
           <speciesReference species="M_R_3hpdeca_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_R_3hpocta_e" sboTerm="SBO:0000627" id="R_EX_R_3hpocta_e" name="R_EX_R_3hpocta_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_R_3hpocta_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_abg4_e" sboTerm="SBO:0000627" id="R_EX_abg4_e" name="R_EX_abg4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -128174,16 +128660,6 @@
           <speciesReference species="M_mal__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_malt_e" sboTerm="SBO:0000627" id="R_EX_malt_e" name="R_EX_malt_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_malt_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_man_e" sboTerm="SBO:0000627" id="R_EX_man_e" name="R_EX_man_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -128224,26 +128700,6 @@
           <speciesReference species="M_met__L_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
-      <reaction metaid="R_EX_metsox_R__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_R__L_e" name="R_EX_metsox_R__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_metsox_R__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
-      <reaction metaid="R_EX_metsox_S__L_e" sboTerm="SBO:0000627" id="R_EX_metsox_S__L_e" name="R_EX_metsox_S__L_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000627</p>
-          </html>
-        </notes>
-        <listOfReactants>
-          <speciesReference species="M_metsox_S__L_e" stoichiometry="1" constant="true"/>
-        </listOfReactants>
-      </reaction>
       <reaction metaid="R_EX_mg2_e" sboTerm="SBO:0000627" id="R_EX_mg2_e" name="R_EX_mg2_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -128314,6 +128770,16 @@
           <speciesReference species="M_n2o_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_nac_e" sboTerm="SBO:0000627" id="R_EX_nac_e" name="R_EX_nac_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_nac_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_nh4_e" sboTerm="SBO:0000627" id="R_EX_nh4_e" name="R_EX_nh4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -128714,6 +129180,16 @@
           <speciesReference species="M_rib__D_e" stoichiometry="1" constant="true"/>
         </listOfReactants>
       </reaction>
+      <reaction metaid="R_EX_s_e" sboTerm="SBO:0000627" id="R_EX_s_e" name="R_EX_s_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000627</p>
+          </html>
+        </notes>
+        <listOfReactants>
+          <speciesReference species="M_s_e" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+      </reaction>
       <reaction metaid="R_EX_salchs4_e" sboTerm="SBO:0000627" id="R_EX_salchs4_e" name="R_EX_salchs4_e" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129312,6 +129788,77 @@
           <speciesReference species="M_h_c" stoichiometry="1" constant="true"/>
         </listOfProducts>
       </reaction>
+      <reaction metaid="R_ORNTA" sboTerm="SBO:0000176" id="R_ORNTA" name="Ornithine transaminase" reversible="true" fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="cobra_default_ub">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000176</p>
+            <p>GAP_FILL: ShewMM</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#R_ORNTA">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.13"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25162"/>
+                  <rdf:li rdf:resource="http://identifiers.org/rhea/25163"/>
+                  <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ORNITHINE-GLU-AMINOTRANSFERASE-RXN"/>
+                  <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70654"/>
+                  <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/seed.reaction/rxn00467"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+        <listOfReactants>
+          <speciesReference species="M_akg_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_orn_c" stoichiometry="1" constant="true"/>
+        </listOfReactants>
+        <listOfProducts>
+          <speciesReference species="M_glu5sa_c" stoichiometry="1" constant="true"/>
+          <speciesReference species="M_glu__L_c" stoichiometry="1" constant="true"/>
+        </listOfProducts>
+      </reaction>
     </listOfReactions>
     <fbc:listOfObjectives fbc:activeObjective="objective">
       <fbc:objective fbc:id="objective" fbc:type="maximize">
@@ -129370,7 +129917,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1821" sboTerm="SBO:0000243" fbc:id="G_SO1821" fbc:name="G_SO1821" fbc:label="G_SO1821">
+      <fbc:geneProduct metaid="G_SO3060" sboTerm="SBO:0000243" fbc:id="G_SO3060" fbc:name="G_SO3060" fbc:label="G_SO3060">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3896" sboTerm="SBO:0000243" fbc:id="G_SO3896" fbc:name="G_SO3896" fbc:label="G_SO3896">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -129378,27 +129932,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1821">
+            <rdf:Description rdf:about="#G_SO3896">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001702"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001897"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHI4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174068"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944926"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10729"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3060" sboTerm="SBO:0000243" fbc:id="G_SO3060" fbc:name="G_SO3060" fbc:label="G_SO3060">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0312" sboTerm="SBO:0000243" fbc:id="G_SO0312" fbc:name="G_SO0312" fbc:label="G_SO0312">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -129420,7 +129966,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3896" sboTerm="SBO:0000243" fbc:id="G_SO3896" fbc:name="G_SO3896" fbc:label="G_SO3896">
+      <fbc:geneProduct metaid="G_SO1821" sboTerm="SBO:0000243" fbc:id="G_SO1821" fbc:name="G_SO1821" fbc:label="G_SO1821">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -129428,13 +129974,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3896">
+            <rdf:Description rdf:about="#G_SO1821">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000823"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944926"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001897"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHI4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174068"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -130155,7 +130702,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0020" sboTerm="SBO:0000243" fbc:id="G_SO0020" fbc:name="G_SO0020" fbc:label="G_SO0020">
+      <fbc:geneProduct metaid="G_SO1677" sboTerm="SBO:0000243" fbc:id="G_SO1677" fbc:name="G_SO1677" fbc:label="G_SO1677">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130163,25 +130710,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0020">
+            <rdf:Description rdf:about="#G_SO1677">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012562"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21151"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948324"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10278"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001412"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002155"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012805"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAP2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176602"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045080"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1677" sboTerm="SBO:0000243" fbc:id="G_SO1677" fbc:name="G_SO1677" fbc:label="G_SO1677">
+      <fbc:geneProduct metaid="G_SO0020" sboTerm="SBO:0000243" fbc:id="G_SO0020" fbc:name="G_SO0020" fbc:label="G_SO0020">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130189,11 +130729,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1677">
+            <rdf:Description rdf:about="#G_SO0020">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045080"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21151"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948324"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10278"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001412"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002155"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012805"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAP2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176602"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -130247,6 +130794,40 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_spontaneous" sboTerm="SBO:0000243" fbc:id="G_spontaneous" fbc:name="G_spontaneous" fbc:label="G_spontaneous">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0511" sboTerm="SBO:0000243" fbc:id="G_SO0511" fbc:name="G_SO0511" fbc:label="G_SO0511">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0511">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10275"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001249"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAZ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176480"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0840" sboTerm="SBO:0000243" fbc:id="G_SO0840" fbc:name="G_SO0840" fbc:label="G_SO0840">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -130288,33 +130869,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0511" sboTerm="SBO:0000243" fbc:id="G_SO0511" fbc:name="G_SO0511" fbc:label="G_SO0511">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0511">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABD8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947758"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10275"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001249"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAZ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176480"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2743" sboTerm="SBO:0000243" fbc:id="G_SO2743" fbc:name="G_SO2743" fbc:label="G_SO2743">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -130398,7 +130952,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2237" sboTerm="SBO:0000243" fbc:id="G_SO2237" fbc:name="G_SO2237" fbc:label="G_SO2237">
+      <fbc:geneProduct metaid="G_SO1332" sboTerm="SBO:0000243" fbc:id="G_SO1332" fbc:name="G_SO1332" fbc:label="G_SO1332">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130406,7 +130960,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2237">
+            <rdf:Description rdf:about="#G_SO1332">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
@@ -130415,22 +130969,17 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023151"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183J1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183J1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08839"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946879"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10789"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P08838"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1332" sboTerm="SBO:0000243" fbc:id="G_SO1332" fbc:name="G_SO1332" fbc:label="G_SO1332">
+      <fbc:geneProduct metaid="G_SO2237" sboTerm="SBO:0000243" fbc:id="G_SO2237" fbc:name="G_SO2237" fbc:label="G_SO2237">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130438,7 +130987,7 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1332">
+            <rdf:Description rdf:about="#G_SO2237">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000121"/>
@@ -130447,17 +130996,22 @@
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008731"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015813"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023151"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024692"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10201"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P08838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183J1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183J1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044634"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946879"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10789"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2236" sboTerm="SBO:0000243" fbc:id="G_SO2236" fbc:name="G_SO2236" fbc:label="G_SO2236">
+      <fbc:geneProduct metaid="G_SO1623" sboTerm="SBO:0000243" fbc:id="G_SO1623" fbc:name="G_SO1623" fbc:label="G_SO1623">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130465,17 +131019,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2236">
+            <rdf:Description rdf:about="#G_SO1623">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007971"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69783"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946880"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10165"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001127"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJF8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175818"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69786"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10787"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004719"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013013"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174447"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -130509,7 +131067,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1623" sboTerm="SBO:0000243" fbc:id="G_SO1623" fbc:name="G_SO1623" fbc:label="G_SO1623">
+      <fbc:geneProduct metaid="G_SO2236" sboTerm="SBO:0000243" fbc:id="G_SO2236" fbc:name="G_SO2236" fbc:label="G_SO2236">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130517,21 +131075,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1623">
+            <rdf:Description rdf:about="#G_SO2236">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69786"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945651"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10787"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003352"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004719"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011299"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013013"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ18"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174447"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007971"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69783"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946880"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10165"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJF8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175818"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -130590,7 +131144,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2278" sboTerm="SBO:0000243" fbc:id="G_SO2278" fbc:name="G_SO2278" fbc:label="G_SO2278">
+      <fbc:geneProduct metaid="G_SO3262" sboTerm="SBO:0000243" fbc:id="G_SO3262" fbc:name="G_SO3262" fbc:label="G_SO3262">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130598,13 +131152,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2278">
+            <rdf:Description rdf:about="#G_SO3262">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00894"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10499"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/855135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000004714"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011766"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012846"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P37251"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -130632,33 +131192,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3262" sboTerm="SBO:0000243" fbc:id="G_SO3262" fbc:name="G_SO3262" fbc:label="G_SO3262">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3262">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/855135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000004714"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011766"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012000"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012846"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029035"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029061"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P37251"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4346" sboTerm="SBO:0000243" fbc:id="G_SO4346" fbc:name="G_SO4346" fbc:label="G_SO4346">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -130673,7 +131206,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2915" sboTerm="SBO:0000243" fbc:id="G_SO2915" fbc:name="G_SO2915" fbc:label="G_SO2915">
+      <fbc:geneProduct metaid="G_SO2278" sboTerm="SBO:0000243" fbc:id="G_SO2278" fbc:name="G_SO2278" fbc:label="G_SO2278">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -130681,17 +131214,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2915">
+            <rdf:Description rdf:about="#G_SO2278">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007579"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946775"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000890"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004372"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDW1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175397"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00894"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10499"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -130728,6 +131257,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2915" sboTerm="SBO:0000243" fbc:id="G_SO2915" fbc:name="G_SO2915" fbc:label="G_SO2915">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2915">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007579"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000890"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDW1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175397"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3261" sboTerm="SBO:0000243" fbc:id="G_SO3261" fbc:name="G_SO3261" fbc:label="G_SO3261">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131050,27 +131604,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4527" sboTerm="SBO:0000243" fbc:id="G_SO4527" fbc:name="G_SO4527" fbc:label="G_SO4527">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4527">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042769"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1716" sboTerm="SBO:0000243" fbc:id="G_SO1716" fbc:name="G_SO1716" fbc:label="G_SO1716">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131092,7 +131625,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3664" sboTerm="SBO:0000243" fbc:id="G_SO3664" fbc:name="G_SO3664" fbc:label="G_SO3664">
+      <fbc:geneProduct metaid="G_SO4527" sboTerm="SBO:0000243" fbc:id="G_SO4527" fbc:name="G_SO4527" fbc:label="G_SO4527">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131100,20 +131633,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3664">
+            <rdf:Description rdf:about="#G_SO4527">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042769"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1237" sboTerm="SBO:0000243" fbc:id="G_SO1237" fbc:name="G_SO1237" fbc:label="G_SO1237">
+      <fbc:geneProduct metaid="G_SO3664" sboTerm="SBO:0000243" fbc:id="G_SO3664" fbc:name="G_SO3664" fbc:label="G_SO3664">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131121,12 +131654,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1237">
+            <rdf:Description rdf:about="#G_SO3664">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10368"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P39066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046183"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -131174,7 +131708,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0073" sboTerm="SBO:0000243" fbc:id="G_SO0073" fbc:name="G_SO0073" fbc:label="G_SO0073">
+      <fbc:geneProduct metaid="G_SO1237" sboTerm="SBO:0000243" fbc:id="G_SO1237" fbc:name="G_SO1237" fbc:label="G_SO1237">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131182,21 +131716,42 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0073">
+            <rdf:Description rdf:about="#G_SO1237">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10368"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P39066"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2927" sboTerm="SBO:0000243" fbc:id="G_SO2927" fbc:name="G_SO2927" fbc:label="G_SO2927">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2927">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13912"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34641"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13915"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34392"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3692" sboTerm="SBO:0000243" fbc:id="G_SO3692" fbc:name="G_SO3692" fbc:label="G_SO3692">
+      <fbc:geneProduct metaid="G_SO0073" sboTerm="SBO:0000243" fbc:id="G_SO0073" fbc:name="G_SO0073" fbc:label="G_SO0073">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131204,22 +131759,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3692">
+            <rdf:Description rdf:about="#G_SO0073">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187Q7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187Q7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13912"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34641"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2927" sboTerm="SBO:0000243" fbc:id="G_SO2927" fbc:name="G_SO2927" fbc:label="G_SO2927">
+      <fbc:geneProduct metaid="G_SO3692" sboTerm="SBO:0000243" fbc:id="G_SO3692" fbc:name="G_SO3692" fbc:label="G_SO3692">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131227,15 +131781,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2927">
+            <rdf:Description rdf:about="#G_SO3692">
               <bqbiol:is>
                 <rdf:Bag>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13915"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34392"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q187Q7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q187Q7"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -131455,13 +132009,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3778" sboTerm="SBO:0000243" fbc:id="G_SO3778" fbc:name="G_SO3778" fbc:label="G_SO3778">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2725" sboTerm="SBO:0000243" fbc:id="G_SO2725" fbc:name="G_SO2725" fbc:label="G_SO2725">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131480,7 +132027,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4312" sboTerm="SBO:0000243" fbc:id="G_SO4312" fbc:name="G_SO4312" fbc:label="G_SO4312">
+      <fbc:geneProduct metaid="G_SO3778" sboTerm="SBO:0000243" fbc:id="G_SO3778" fbc:name="G_SO3778" fbc:label="G_SO3778">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4466" sboTerm="SBO:0000243" fbc:id="G_SO4466" fbc:name="G_SO4466" fbc:label="G_SO4466">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131488,23 +132042,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4312">
+            <rdf:Description rdf:about="#G_SO4466">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012432"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00936"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947755"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10170"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000274"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAG2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176683"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885891"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4466" sboTerm="SBO:0000243" fbc:id="G_SO4466" fbc:name="G_SO4466" fbc:label="G_SO4466">
+      <fbc:geneProduct metaid="G_SO4312" sboTerm="SBO:0000243" fbc:id="G_SO4312" fbc:name="G_SO4312" fbc:label="G_SO4312">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131512,10 +132060,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4466">
+            <rdf:Description rdf:about="#G_SO4312">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885891"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012432"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00936"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10170"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000274"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAG2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176683"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -131592,12 +132146,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2448" sboTerm="SBO:0000243" fbc:id="G_SO2448" fbc:name="G_SO2448" fbc:label="G_SO2448">
+      <fbc:geneProduct metaid="G_SO0464" sboTerm="SBO:0000243" fbc:id="G_SO0464" fbc:name="G_SO0464" fbc:label="G_SO0464">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0464">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIH9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175001"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0190" sboTerm="SBO:0000243" fbc:id="G_SO0190" fbc:name="G_SO0190" fbc:label="G_SO0190">
         <notes>
@@ -131623,7 +132190,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0464" sboTerm="SBO:0000243" fbc:id="G_SO0464" fbc:name="G_SO0464" fbc:label="G_SO0464">
+      <fbc:geneProduct metaid="G_SO3903" sboTerm="SBO:0000243" fbc:id="G_SO3903" fbc:name="G_SO3903" fbc:label="G_SO3903">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131631,19 +132198,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0464">
+            <rdf:Description rdf:about="#G_SO3903">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIH9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009961"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q93K97"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947519"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12184"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3903" sboTerm="SBO:0000243" fbc:id="G_SO3903" fbc:name="G_SO3903" fbc:label="G_SO3903">
+      <fbc:geneProduct metaid="G_SO2448" sboTerm="SBO:0000243" fbc:id="G_SO2448" fbc:name="G_SO2448" fbc:label="G_SO2448">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3803" sboTerm="SBO:0000243" fbc:id="G_SO3803" fbc:name="G_SO3803" fbc:label="G_SO3803">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131651,13 +132226,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3903">
+            <rdf:Description rdf:about="#G_SO3803">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009961"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q93K97"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947519"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12184"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9M2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBN8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176225"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -131690,7 +132270,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3803" sboTerm="SBO:0000243" fbc:id="G_SO3803" fbc:name="G_SO3803" fbc:label="G_SO3803">
+      <fbc:geneProduct metaid="G_SO3727" sboTerm="SBO:0000243" fbc:id="G_SO3727" fbc:name="G_SO3727" fbc:label="G_SO3727">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131698,18 +132278,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3803">
+            <rdf:Description rdf:about="#G_SO3727">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9M2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946624"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000836"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002375"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBN8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009029"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10186"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBS9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176183"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -131747,33 +132328,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3727" sboTerm="SBO:0000243" fbc:id="G_SO3727" fbc:name="G_SO3727" fbc:label="G_SO3727">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3727">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041607"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041607"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009029"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P21156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10186"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002500"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBS9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176183"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0452" sboTerm="SBO:0000243" fbc:id="G_SO0452" fbc:name="G_SO0452" fbc:label="G_SO0452">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131867,7 +132421,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3937" sboTerm="SBO:0000243" fbc:id="G_SO3937" fbc:name="G_SO3937" fbc:label="G_SO3937">
+      <fbc:geneProduct metaid="G_SO1258" sboTerm="SBO:0000243" fbc:id="G_SO1258" fbc:name="G_SO1258" fbc:label="G_SO1258">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131875,25 +132429,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3937">
+            <rdf:Description rdf:about="#G_SO1258">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041987"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013672"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A7D4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948695"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10790"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJT2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173224"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P29726"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1258" sboTerm="SBO:0000243" fbc:id="G_SO1258" fbc:name="G_SO1258" fbc:label="G_SO1258">
+      <fbc:geneProduct metaid="G_SO3937" sboTerm="SBO:0000243" fbc:id="G_SO3937" fbc:name="G_SO3937" fbc:label="G_SO3937">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -131901,27 +132451,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1258">
+            <rdf:Description rdf:about="#G_SO3937">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041987"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A7D4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948695"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10790"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001114"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR018220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P29726"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJT2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173224"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0990" sboTerm="SBO:0000243" fbc:id="G_SO0990" fbc:name="G_SO0990" fbc:label="G_SO0990">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3505" sboTerm="SBO:0000243" fbc:id="G_SO3505" fbc:name="G_SO3505" fbc:label="G_SO3505">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -131949,6 +132496,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0990" sboTerm="SBO:0000243" fbc:id="G_SO0990" fbc:name="G_SO0990" fbc:label="G_SO0990">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0017" sboTerm="SBO:0000243" fbc:id="G_SO0017" fbc:name="G_SO0017" fbc:label="G_SO0017">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132177,14 +132731,14 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1418" sboTerm="SBO:0000243" fbc:id="G_SO1418" fbc:name="G_SO1418" fbc:label="G_SO1418">
+      <fbc:geneProduct metaid="G_SO1109" sboTerm="SBO:0000243" fbc:id="G_SO1109" fbc:name="G_SO1109" fbc:label="G_SO1109">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1109" sboTerm="SBO:0000243" fbc:id="G_SO1109" fbc:name="G_SO1109" fbc:label="G_SO1109">
+      <fbc:geneProduct metaid="G_SO1418" sboTerm="SBO:0000243" fbc:id="G_SO1418" fbc:name="G_SO1418" fbc:label="G_SO1418">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -132396,13 +132950,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0806" sboTerm="SBO:0000243" fbc:id="G_SO0806" fbc:name="G_SO0806" fbc:label="G_SO0806">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0830" sboTerm="SBO:0000243" fbc:id="G_SO0830" fbc:name="G_SO0830" fbc:label="G_SO0830">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132432,6 +132979,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0806" sboTerm="SBO:0000243" fbc:id="G_SO0806" fbc:name="G_SO0806" fbc:label="G_SO0806">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1804" sboTerm="SBO:0000243" fbc:id="G_SO1804" fbc:name="G_SO1804" fbc:label="G_SO1804">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132451,7 +133005,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1801" sboTerm="SBO:0000243" fbc:id="G_SO1801" fbc:name="G_SO1801" fbc:label="G_SO1801">
+      <fbc:geneProduct metaid="G_SO1805" sboTerm="SBO:0000243" fbc:id="G_SO1805" fbc:name="G_SO1805" fbc:label="G_SO1805">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -132459,19 +133013,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1801">
+            <rdf:Description rdf:about="#G_SO1805">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011564"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948056"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12628"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WA21"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10248"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000914"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CG20"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176840"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -132497,7 +133050,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1805" sboTerm="SBO:0000243" fbc:id="G_SO1805" fbc:name="G_SO1805" fbc:label="G_SO1805">
+      <fbc:geneProduct metaid="G_SO1801" sboTerm="SBO:0000243" fbc:id="G_SO1801" fbc:name="G_SO1801" fbc:label="G_SO1801">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -132505,30 +133058,45 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1805">
+            <rdf:Description rdf:about="#G_SO1801">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011576"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P23847"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10248"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000914"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CG20"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176840"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011564"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948056"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010066"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WA21"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176836"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4217" sboTerm="SBO:0000243" fbc:id="G_SO4217" fbc:name="G_SO4217" fbc:label="G_SO4217">
+      <fbc:geneProduct metaid="G_SO2217" sboTerm="SBO:0000243" fbc:id="G_SO2217" fbc:name="G_SO2217" fbc:label="G_SO2217">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2217">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10213"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3265" sboTerm="SBO:0000243" fbc:id="G_SO3265" fbc:name="G_SO3265" fbc:label="G_SO3265">
         <notes>
@@ -132549,26 +133117,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2217" sboTerm="SBO:0000243" fbc:id="G_SO2217" fbc:name="G_SO2217" fbc:label="G_SO2217">
+      <fbc:geneProduct metaid="G_SO4217" sboTerm="SBO:0000243" fbc:id="G_SO4217" fbc:name="G_SO4217" fbc:label="G_SO4217">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2217">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001309"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6J8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10213"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2304" sboTerm="SBO:0000243" fbc:id="G_SO2304" fbc:name="G_SO2304" fbc:label="G_SO2304">
         <notes>
@@ -132773,7 +133327,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3063" sboTerm="SBO:0000243" fbc:id="G_SO3063" fbc:name="G_SO3063" fbc:label="G_SO3063">
+      <fbc:geneProduct metaid="G_SO3541" sboTerm="SBO:0000243" fbc:id="G_SO3541" fbc:name="G_SO3541" fbc:label="G_SO3541">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -132781,19 +133335,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3063">
+            <rdf:Description rdf:about="#G_SO3541">
               <bqbiol:is>
                 <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000020"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944745"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11555"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13784"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O32060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O31464"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3541" sboTerm="SBO:0000243" fbc:id="G_SO3541" fbc:name="G_SO3541" fbc:label="G_SO3541">
+      <fbc:geneProduct metaid="G_SO3063" sboTerm="SBO:0000243" fbc:id="G_SO3063" fbc:name="G_SO3063" fbc:label="G_SO3063">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -132801,16 +133359,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3541">
+            <rdf:Description rdf:about="#G_SO3063">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000020"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944745"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11555"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001463"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG12752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O31464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13784"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O32060"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -132837,13 +133391,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SOA0161" sboTerm="SBO:0000243" fbc:id="G_SOA0161" fbc:name="G_SOA0161" fbc:label="G_SOA0161">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2054" sboTerm="SBO:0000243" fbc:id="G_SO2054" fbc:name="G_SO2054" fbc:label="G_SO2054">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132891,6 +133438,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SOA0161" sboTerm="SBO:0000243" fbc:id="G_SOA0161" fbc:name="G_SOA0161" fbc:label="G_SOA0161">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2452" sboTerm="SBO:0000243" fbc:id="G_SO2452" fbc:name="G_SO2452" fbc:label="G_SO2452">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -132929,21 +133483,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0900" sboTerm="SBO:0000243" fbc:id="G_SO0900" fbc:name="G_SO0900" fbc:label="G_SO0900">
+      <fbc:geneProduct metaid="G_SO0438" sboTerm="SBO:0000243" fbc:id="G_SO0438" fbc:name="G_SO0438" fbc:label="G_SO0438">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0438" sboTerm="SBO:0000243" fbc:id="G_SO0438" fbc:name="G_SO0438" fbc:label="G_SO0438">
+      <fbc:geneProduct metaid="G_SO3898" sboTerm="SBO:0000243" fbc:id="G_SO3898" fbc:name="G_SO3898" fbc:label="G_SO3898">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3898" sboTerm="SBO:0000243" fbc:id="G_SO3898" fbc:name="G_SO3898" fbc:label="G_SO3898">
+      <fbc:geneProduct metaid="G_SO0900" sboTerm="SBO:0000243" fbc:id="G_SO0900" fbc:name="G_SO0900" fbc:label="G_SO0900">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -133084,58 +133638,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1751" sboTerm="SBO:0000243" fbc:id="G_SO1751" fbc:name="G_SO1751" fbc:label="G_SO1751">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1059" sboTerm="SBO:0000243" fbc:id="G_SO1059" fbc:name="G_SO1059" fbc:label="G_SO1059">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1059">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887403"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2264" sboTerm="SBO:0000243" fbc:id="G_SO2264" fbc:name="G_SO2264" fbc:label="G_SO2264">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2264">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008324"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6B7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12677"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000192"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJN7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175720"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0876" sboTerm="SBO:0000243" fbc:id="G_SO0876" fbc:name="G_SO0876" fbc:label="G_SO0876">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133161,6 +133663,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1751" sboTerm="SBO:0000243" fbc:id="G_SO1751" fbc:name="G_SO1751" fbc:label="G_SO1751">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2600" sboTerm="SBO:0000243" fbc:id="G_SO2600" fbc:name="G_SO2600" fbc:label="G_SO2600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133220,6 +133729,51 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1059" sboTerm="SBO:0000243" fbc:id="G_SO1059" fbc:name="G_SO1059" fbc:label="G_SO1059">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1059">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887403"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2264" sboTerm="SBO:0000243" fbc:id="G_SO2264" fbc:name="G_SO2264" fbc:label="G_SO2264">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2264">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008324"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6B7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12677"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000192"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJN7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175720"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1368" sboTerm="SBO:0000243" fbc:id="G_SO1368" fbc:name="G_SO1368" fbc:label="G_SO1368">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133426,44 +133980,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3953" sboTerm="SBO:0000243" fbc:id="G_SO3953" fbc:name="G_SO3953" fbc:label="G_SO3953">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3953">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3952" sboTerm="SBO:0000243" fbc:id="G_SO3952" fbc:name="G_SO3952" fbc:label="G_SO3952">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3952">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4693" sboTerm="SBO:0000243" fbc:id="G_SO4693" fbc:name="G_SO4693" fbc:label="G_SO4693">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133527,25 +134043,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3954" sboTerm="SBO:0000243" fbc:id="G_SO3954" fbc:name="G_SO3954" fbc:label="G_SO3954">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3954">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0822" sboTerm="SBO:0000243" fbc:id="G_SO0822" fbc:name="G_SO0822" fbc:label="G_SO0822">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133567,6 +134064,63 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3953" sboTerm="SBO:0000243" fbc:id="G_SO3953" fbc:name="G_SO3953" fbc:label="G_SO3953">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3953">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044875"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3952" sboTerm="SBO:0000243" fbc:id="G_SO3952" fbc:name="G_SO3952" fbc:label="G_SO3952">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3952">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044877"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3954" sboTerm="SBO:0000243" fbc:id="G_SO3954" fbc:name="G_SO3954" fbc:label="G_SO3954">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3954">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044874"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1290" sboTerm="SBO:0000243" fbc:id="G_SO1290" fbc:name="G_SO1290" fbc:label="G_SO1290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133783,27 +134337,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2115" sboTerm="SBO:0000243" fbc:id="G_SO2115" fbc:name="G_SO2115" fbc:label="G_SO2115">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2115">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37595"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945456"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12407"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2421" sboTerm="SBO:0000243" fbc:id="G_SO2421" fbc:name="G_SO2421" fbc:label="G_SO2421">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133829,12 +134362,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3175" sboTerm="SBO:0000243" fbc:id="G_SO3175" fbc:name="G_SO3175" fbc:label="G_SO3175">
+      <fbc:geneProduct metaid="G_SO2115" sboTerm="SBO:0000243" fbc:id="G_SO2115" fbc:name="G_SO2115" fbc:label="G_SO2115">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2115">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945456"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12407"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2767" sboTerm="SBO:0000243" fbc:id="G_SO2767" fbc:name="G_SO2767" fbc:label="G_SO2767">
         <notes>
@@ -133862,6 +134409,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3175" sboTerm="SBO:0000243" fbc:id="G_SO3175" fbc:name="G_SO3175" fbc:label="G_SO3175">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0534" sboTerm="SBO:0000243" fbc:id="G_SO0534" fbc:name="G_SO0534" fbc:label="G_SO0534">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -133942,34 +134496,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4055" sboTerm="SBO:0000243" fbc:id="G_SO4055" fbc:name="G_SO4055" fbc:label="G_SO4055">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4055">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012889"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00562"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948433"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10590"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001341"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001342"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005106"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CL18"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172963"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3986" sboTerm="SBO:0000243" fbc:id="G_SO3986" fbc:name="G_SO3986" fbc:label="G_SO3986">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134024,6 +134550,34 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4055" sboTerm="SBO:0000243" fbc:id="G_SO4055" fbc:name="G_SO4055" fbc:label="G_SO4055">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4055">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00562"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10590"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001341"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CL18"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1172963"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3415" sboTerm="SBO:0000243" fbc:id="G_SO3415" fbc:name="G_SO3415" fbc:label="G_SO3415">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134291,7 +134845,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3382" sboTerm="SBO:0000243" fbc:id="G_SO3382" fbc:name="G_SO3382" fbc:label="G_SO3382">
+      <fbc:geneProduct metaid="G_SO4141" sboTerm="SBO:0000243" fbc:id="G_SO4141" fbc:name="G_SO4141" fbc:label="G_SO4141">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -134299,18 +134853,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3382">
+            <rdf:Description rdf:about="#G_SO4141">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041838"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/855266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000004839"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4141" sboTerm="SBO:0000243" fbc:id="G_SO4141" fbc:name="G_SO4141" fbc:label="G_SO4141">
+      <fbc:geneProduct metaid="G_SO3382" sboTerm="SBO:0000243" fbc:id="G_SO3382" fbc:name="G_SO3382" fbc:label="G_SO3382">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -134318,11 +134872,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4141">
+            <rdf:Description rdf:about="#G_SO3382">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/855266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000004839"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041838"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041838"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -134374,6 +134928,102 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4748" sboTerm="SBO:0000243" fbc:id="G_SO4748" fbc:name="G_SO4748" fbc:label="G_SO4748">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4748">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012211"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948243"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10104"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000131"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176950"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4749" sboTerm="SBO:0000243" fbc:id="G_SO4749" fbc:name="G_SO4749" fbc:label="G_SO4749">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4749">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012213"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABB0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948242"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10098"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000194"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004100"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176951"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4752" sboTerm="SBO:0000243" fbc:id="G_SO4752" fbc:name="G_SO4752" fbc:label="G_SO4752">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4752">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041990"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4750" sboTerm="SBO:0000243" fbc:id="G_SO4750" fbc:name="G_SO4750" fbc:label="G_SO4750">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4750">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10105"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000711"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFM5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176952"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4746" sboTerm="SBO:0000243" fbc:id="G_SO4746" fbc:name="G_SO4746" fbc:label="G_SO4746">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134398,123 +135048,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4749" sboTerm="SBO:0000243" fbc:id="G_SO4749" fbc:name="G_SO4749" fbc:label="G_SO4749">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4749">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012213"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABB0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948242"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10098"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000194"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004100"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176951"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4751" sboTerm="SBO:0000243" fbc:id="G_SO4751" fbc:name="G_SO4751" fbc:label="G_SO4751">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4751">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012217"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948247"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10103"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4752" sboTerm="SBO:0000243" fbc:id="G_SO4752" fbc:name="G_SO4752" fbc:label="G_SO4752">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4752">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041990"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041990"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4750" sboTerm="SBO:0000243" fbc:id="G_SO4750" fbc:name="G_SO4750" fbc:label="G_SO4750">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4750">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012215"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948254"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10105"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000711"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CFM5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176952"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4748" sboTerm="SBO:0000243" fbc:id="G_SO4748" fbc:name="G_SO4748" fbc:label="G_SO4748">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4748">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012211"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948243"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10104"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000131"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0W9R5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176950"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4753" sboTerm="SBO:0000243" fbc:id="G_SO4753" fbc:name="G_SO4753" fbc:label="G_SO4753">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134571,6 +135104,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4751" sboTerm="SBO:0000243" fbc:id="G_SO4751" fbc:name="G_SO4751" fbc:label="G_SO4751">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4751">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABA0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948247"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10103"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0882" sboTerm="SBO:0000243" fbc:id="G_SO0882" fbc:name="G_SO0882" fbc:label="G_SO0882">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134601,7 +135155,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2740" sboTerm="SBO:0000243" fbc:id="G_SO2740" fbc:name="G_SO2740" fbc:label="G_SO2740">
+      <fbc:geneProduct metaid="G_SO3925" sboTerm="SBO:0000243" fbc:id="G_SO3925" fbc:name="G_SO3925" fbc:label="G_SO3925">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -134609,28 +135163,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2740">
+            <rdf:Description rdf:about="#G_SO3925">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044069"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P12996"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10118"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002684"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005244"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH65"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174000"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024021"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185U5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185U5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898214"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3925" sboTerm="SBO:0000243" fbc:id="G_SO3925" fbc:name="G_SO3925" fbc:label="G_SO3925">
+      <fbc:geneProduct metaid="G_SO2740" sboTerm="SBO:0000243" fbc:id="G_SO2740" fbc:name="G_SO2740" fbc:label="G_SO2740">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -134638,18 +135189,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3925">
+            <rdf:Description rdf:about="#G_SO2740">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044069"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P12996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10118"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002684"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013785"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024021"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q185U5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q185U5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH65"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174000"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -134721,6 +135275,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0725" sboTerm="SBO:0000243" fbc:id="G_SO0725" fbc:name="G_SO0725" fbc:label="G_SO0725">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0725">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002048"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBX3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176138"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1070" sboTerm="SBO:0000243" fbc:id="G_SO1070" fbc:name="G_SO1070" fbc:label="G_SO1070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134756,31 +135335,6 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0725" sboTerm="SBO:0000243" fbc:id="G_SO0725" fbc:name="G_SO0725" fbc:label="G_SO0725">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0725">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002048"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WBX3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176138"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0354" sboTerm="SBO:0000243" fbc:id="G_SO0354" fbc:name="G_SO0354" fbc:label="G_SO0354">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134916,25 +135470,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1925" sboTerm="SBO:0000243" fbc:id="G_SO1925" fbc:name="G_SO1925" fbc:label="G_SO1925">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1925">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043525"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4597" sboTerm="SBO:0000243" fbc:id="G_SO4597" fbc:name="G_SO4597" fbc:label="G_SO4597">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -134963,21 +135498,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0860" sboTerm="SBO:0000243" fbc:id="G_SO0860" fbc:name="G_SO0860" fbc:label="G_SO0860">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2366" sboTerm="SBO:0000243" fbc:id="G_SO2366" fbc:name="G_SO2366" fbc:label="G_SO2366">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0544" sboTerm="SBO:0000243" fbc:id="G_SO0544" fbc:name="G_SO0544" fbc:label="G_SO0544">
+      <fbc:geneProduct metaid="G_SO1925" sboTerm="SBO:0000243" fbc:id="G_SO1925" fbc:name="G_SO1925" fbc:label="G_SO1925">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -134985,34 +135506,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0544">
+            <rdf:Description rdf:about="#G_SO1925">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004963"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76129"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945815"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043525"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4711" sboTerm="SBO:0000243" fbc:id="G_SO4711" fbc:name="G_SO4711" fbc:label="G_SO4711">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4657" sboTerm="SBO:0000243" fbc:id="G_SO4657" fbc:name="G_SO4657" fbc:label="G_SO4657">
+      <fbc:geneProduct metaid="G_SO3491" sboTerm="SBO:0000243" fbc:id="G_SO3491" fbc:name="G_SO3491" fbc:label="G_SO3491">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0427" sboTerm="SBO:0000243" fbc:id="G_SO0427" fbc:name="G_SO0427" fbc:label="G_SO0427">
+      <fbc:geneProduct metaid="G_SO0860" sboTerm="SBO:0000243" fbc:id="G_SO0860" fbc:name="G_SO0860" fbc:label="G_SO0860">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135026,7 +135538,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2862" sboTerm="SBO:0000243" fbc:id="G_SO2862" fbc:name="G_SO2862" fbc:label="G_SO2862">
+      <fbc:geneProduct metaid="G_SO0427" sboTerm="SBO:0000243" fbc:id="G_SO0427" fbc:name="G_SO0427" fbc:label="G_SO0427">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135040,14 +135552,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4445" sboTerm="SBO:0000243" fbc:id="G_SO4445" fbc:name="G_SO4445" fbc:label="G_SO4445">
+      <fbc:geneProduct metaid="G_SO0544" sboTerm="SBO:0000243" fbc:id="G_SO0544" fbc:name="G_SO0544" fbc:label="G_SO0544">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0544">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004963"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76129"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13792"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2541" sboTerm="SBO:0000243" fbc:id="G_SO2541" fbc:name="G_SO2541" fbc:label="G_SO2541">
+      <fbc:geneProduct metaid="G_SO2366" sboTerm="SBO:0000243" fbc:id="G_SO2366" fbc:name="G_SO2366" fbc:label="G_SO2366">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135077,7 +135603,35 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3491" sboTerm="SBO:0000243" fbc:id="G_SO3491" fbc:name="G_SO3491" fbc:label="G_SO3491">
+      <fbc:geneProduct metaid="G_SO4657" sboTerm="SBO:0000243" fbc:id="G_SO4657" fbc:name="G_SO4657" fbc:label="G_SO4657">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4711" sboTerm="SBO:0000243" fbc:id="G_SO4711" fbc:name="G_SO4711" fbc:label="G_SO4711">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2862" sboTerm="SBO:0000243" fbc:id="G_SO2862" fbc:name="G_SO2862" fbc:label="G_SO2862">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2541" sboTerm="SBO:0000243" fbc:id="G_SO2541" fbc:name="G_SO2541" fbc:label="G_SO2541">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4445" sboTerm="SBO:0000243" fbc:id="G_SO4445" fbc:name="G_SO4445" fbc:label="G_SO4445">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135202,7 +135756,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1362" sboTerm="SBO:0000243" fbc:id="G_SO1362" fbc:name="G_SO1362" fbc:label="G_SO1362">
+      <fbc:geneProduct metaid="G_SO1367" sboTerm="SBO:0000243" fbc:id="G_SO1367" fbc:name="G_SO1367" fbc:label="G_SO1367">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135210,26 +135764,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1362">
+            <rdf:Description rdf:about="#G_SO1367">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008547"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11039"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003099"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008244"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011277"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK89"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176102"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9J8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10707"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1367" sboTerm="SBO:0000243" fbc:id="G_SO1367" fbc:name="G_SO1367" fbc:label="G_SO1367">
+      <fbc:geneProduct metaid="G_SO1362" sboTerm="SBO:0000243" fbc:id="G_SO1362" fbc:name="G_SO1362" fbc:label="G_SO1362">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135237,13 +135785,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1367">
+            <rdf:Description rdf:about="#G_SO1362">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9J8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10707"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008547"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003099"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008244"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011277"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK89"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176102"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -135401,7 +135955,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0038" sboTerm="SBO:0000243" fbc:id="G_SO0038" fbc:name="G_SO0038" fbc:label="G_SO0038">
+      <fbc:geneProduct metaid="G_SO4520" sboTerm="SBO:0000243" fbc:id="G_SO4520" fbc:name="G_SO4520" fbc:label="G_SO4520">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135409,23 +135963,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0038">
+            <rdf:Description rdf:about="#G_SO4520">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008034"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12189"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCN6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175853"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023404"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11395"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P54304"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1326" sboTerm="SBO:0000243" fbc:id="G_SO1326" fbc:name="G_SO1326" fbc:label="G_SO1326">
+      <fbc:geneProduct metaid="G_SO0038" sboTerm="SBO:0000243" fbc:id="G_SO0038" fbc:name="G_SO0038" fbc:label="G_SO0038">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135433,17 +135987,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1326">
+            <rdf:Description rdf:about="#G_SO0038">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885300"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008034"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P36553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12189"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCN6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175853"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4520" sboTerm="SBO:0000243" fbc:id="G_SO4520" fbc:name="G_SO4520" fbc:label="G_SO4520">
+      <fbc:geneProduct metaid="G_SO1326" sboTerm="SBO:0000243" fbc:id="G_SO1326" fbc:name="G_SO1326" fbc:label="G_SO1326">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135451,16 +136011,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4520">
+            <rdf:Description rdf:about="#G_SO1326">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004559"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006638"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007197"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR023404"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11395"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P54304"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885300"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -135511,7 +136065,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4653" sboTerm="SBO:0000243" fbc:id="G_SO4653" fbc:name="G_SO4653" fbc:label="G_SO4653">
+      <fbc:geneProduct metaid="G_SO4655" sboTerm="SBO:0000243" fbc:id="G_SO4655" fbc:name="G_SO4655" fbc:label="G_SO4655">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4654" sboTerm="SBO:0000243" fbc:id="G_SO4654" fbc:name="G_SO4654" fbc:label="G_SO4654">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135519,11 +136080,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4653">
+            <rdf:Description rdf:about="#G_SO4654">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -135551,7 +136112,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3602" sboTerm="SBO:0000243" fbc:id="G_SO3602" fbc:name="G_SO3602" fbc:label="G_SO3602">
+      <fbc:geneProduct metaid="G_SO4653" sboTerm="SBO:0000243" fbc:id="G_SO4653" fbc:name="G_SO4653" fbc:label="G_SO4653">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135559,35 +136120,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3602">
+            <rdf:Description rdf:about="#G_SO4653">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042563"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007986"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16676"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946889"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005666"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCQ4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042523"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4655" sboTerm="SBO:0000243" fbc:id="G_SO4655" fbc:name="G_SO4655" fbc:label="G_SO4655">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4654" sboTerm="SBO:0000243" fbc:id="G_SO4654" fbc:name="G_SO4654" fbc:label="G_SO4654">
+      <fbc:geneProduct metaid="G_SO3602" sboTerm="SBO:0000243" fbc:id="G_SO3602" fbc:name="G_SO3602" fbc:label="G_SO3602">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135595,11 +136139,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4654">
+            <rdf:Description rdf:about="#G_SO3602">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042563"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007986"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16676"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946889"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005666"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCQ4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175834"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -135932,7 +136486,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0609" sboTerm="SBO:0000243" fbc:id="G_SO0609" fbc:name="G_SO0609" fbc:label="G_SO0609">
+      <fbc:geneProduct metaid="G_SO0608" sboTerm="SBO:0000243" fbc:id="G_SO0608" fbc:name="G_SO0608" fbc:label="G_SO0608">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135940,18 +136494,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
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-            <rdf:Description rdf:about="#G_SO0609">
+            <rdf:Description rdf:about="#G_SO0608">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
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           </rdf:RDF>
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-      <fbc:geneProduct metaid="G_SO0610" sboTerm="SBO:0000243" fbc:id="G_SO0610" fbc:name="G_SO0610" fbc:label="G_SO0610">
+      <fbc:geneProduct metaid="G_SO0609" sboTerm="SBO:0000243" fbc:id="G_SO0609" fbc:name="G_SO0609" fbc:label="G_SO0609">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135959,18 +136513,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0610">
+            <rdf:Description rdf:about="#G_SO0609">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041759"/>
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       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0608" sboTerm="SBO:0000243" fbc:id="G_SO0608" fbc:name="G_SO0608" fbc:label="G_SO0608">
+      <fbc:geneProduct metaid="G_SO0610" sboTerm="SBO:0000243" fbc:id="G_SO0610" fbc:name="G_SO0610" fbc:label="G_SO0610">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -135978,11 +136532,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0608">
+            <rdf:Description rdf:about="#G_SO0610">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044363"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041644"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136014,7 +136568,7 @@
           </rdf:RDF>
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       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2191" sboTerm="SBO:0000243" fbc:id="G_SO2191" fbc:name="G_SO2191" fbc:label="G_SO2191">
+      <fbc:geneProduct metaid="G_SO1812" sboTerm="SBO:0000243" fbc:id="G_SO1812" fbc:name="G_SO1812" fbc:label="G_SO1812">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136022,20 +136576,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2191">
+            <rdf:Description rdf:about="#G_SO1812">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06721"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10583"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041604"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1812" sboTerm="SBO:0000243" fbc:id="G_SO1812" fbc:name="G_SO1812" fbc:label="G_SO1812">
+      <fbc:geneProduct metaid="G_SO2191" sboTerm="SBO:0000243" fbc:id="G_SO2191" fbc:name="G_SO2191" fbc:label="G_SO2191">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136043,11 +136595,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1812">
+            <rdf:Description rdf:about="#G_SO2191">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041604"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041604"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06721"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10583"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136176,13 +136730,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4147" sboTerm="SBO:0000243" fbc:id="G_SO4147" fbc:name="G_SO4147" fbc:label="G_SO4147">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3285" sboTerm="SBO:0000243" fbc:id="G_SO3285" fbc:name="G_SO3285" fbc:label="G_SO3285">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136207,6 +136754,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4147" sboTerm="SBO:0000243" fbc:id="G_SO4147" fbc:name="G_SO4147" fbc:label="G_SO4147">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3284" sboTerm="SBO:0000243" fbc:id="G_SO3284" fbc:name="G_SO3284" fbc:label="G_SO3284">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136228,7 +136782,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4609" sboTerm="SBO:0000243" fbc:id="G_SO4609" fbc:name="G_SO4609" fbc:label="G_SO4609">
+      <fbc:geneProduct metaid="G_SO4608" sboTerm="SBO:0000243" fbc:id="G_SO4608" fbc:name="G_SO4608" fbc:label="G_SO4608">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136236,11 +136790,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4609">
+            <rdf:Description rdf:about="#G_SO4608">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136285,7 +136839,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4608" sboTerm="SBO:0000243" fbc:id="G_SO4608" fbc:name="G_SO4608" fbc:label="G_SO4608">
+      <fbc:geneProduct metaid="G_SO4609" sboTerm="SBO:0000243" fbc:id="G_SO4609" fbc:name="G_SO4609" fbc:label="G_SO4609">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136293,18 +136847,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4608">
+            <rdf:Description rdf:about="#G_SO4609">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043591"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043592"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2364" sboTerm="SBO:0000243" fbc:id="G_SO2364" fbc:name="G_SO2364" fbc:label="G_SO2364">
+      <fbc:geneProduct metaid="G_SO2361" sboTerm="SBO:0000243" fbc:id="G_SO2361" fbc:name="G_SO2361" fbc:label="G_SO2361">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136312,13 +136866,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2364">
+            <rdf:Description rdf:about="#G_SO2361">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041688"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041696"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136346,7 +136900,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2362" sboTerm="SBO:0000243" fbc:id="G_SO2362" fbc:name="G_SO2362" fbc:label="G_SO2362">
+      <fbc:geneProduct metaid="G_SO2364" sboTerm="SBO:0000243" fbc:id="G_SO2364" fbc:name="G_SO2364" fbc:label="G_SO2364">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136354,18 +136908,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2362">
+            <rdf:Description rdf:about="#G_SO2364">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041967"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1047010"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042804"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2361" sboTerm="SBO:0000243" fbc:id="G_SO2361" fbc:name="G_SO2361" fbc:label="G_SO2361">
+      <fbc:geneProduct metaid="G_SO2362" sboTerm="SBO:0000243" fbc:id="G_SO2362" fbc:name="G_SO2362" fbc:label="G_SO2362">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136373,13 +136929,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2361">
+            <rdf:Description rdf:about="#G_SO2362">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041688"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041696"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041696"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041967"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136575,6 +137129,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3467" sboTerm="SBO:0000243" fbc:id="G_SO3467" fbc:name="G_SO3467" fbc:label="G_SO3467">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3467">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044291"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046752"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0142" sboTerm="SBO:0000243" fbc:id="G_SO0142" fbc:name="G_SO0142" fbc:label="G_SO0142">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136599,27 +137174,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3467" sboTerm="SBO:0000243" fbc:id="G_SO3467" fbc:name="G_SO3467" fbc:label="G_SO3467">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3467">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044291"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044291"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046752"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2737" sboTerm="SBO:0000243" fbc:id="G_SO2737" fbc:name="G_SO2737" fbc:label="G_SO2737">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -136713,7 +137267,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0756" sboTerm="SBO:0000243" fbc:id="G_SO0756" fbc:name="G_SO0756" fbc:label="G_SO0756">
+      <fbc:geneProduct metaid="G_SO2646" sboTerm="SBO:0000243" fbc:id="G_SO2646" fbc:name="G_SO2646" fbc:label="G_SO2646">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136721,20 +137275,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0756">
+            <rdf:Description rdf:about="#G_SO2646">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002560"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB91"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10079"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005686"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00887"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946229"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10080"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2646" sboTerm="SBO:0000243" fbc:id="G_SO2646" fbc:name="G_SO2646" fbc:label="G_SO2646">
+      <fbc:geneProduct metaid="G_SO0756" sboTerm="SBO:0000243" fbc:id="G_SO0756" fbc:name="G_SO0756" fbc:label="G_SO0756">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136742,13 +137296,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2646">
+            <rdf:Description rdf:about="#G_SO0756">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005686"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00887"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946229"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002560"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AB91"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10079"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136820,42 +137374,21 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2174" sboTerm="SBO:0000243" fbc:id="G_SO2174" fbc:name="G_SO2174" fbc:label="G_SO2174">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2174">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003472"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75908"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13866"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2434" sboTerm="SBO:0000243" fbc:id="G_SO2434" fbc:name="G_SO2434" fbc:label="G_SO2434">
+      <fbc:geneProduct metaid="G_SO0569" sboTerm="SBO:0000243" fbc:id="G_SO0569" fbc:name="G_SO0569" fbc:label="G_SO0569">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0569" sboTerm="SBO:0000243" fbc:id="G_SO0569" fbc:name="G_SO0569" fbc:label="G_SO0569">
+      <fbc:geneProduct metaid="G_SO0796" sboTerm="SBO:0000243" fbc:id="G_SO0796" fbc:name="G_SO0796" fbc:label="G_SO0796">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2197" sboTerm="SBO:0000243" fbc:id="G_SO2197" fbc:name="G_SO2197" fbc:label="G_SO2197">
+      <fbc:geneProduct metaid="G_SO0841" sboTerm="SBO:0000243" fbc:id="G_SO0841" fbc:name="G_SO0841" fbc:label="G_SO0841">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136863,12 +137396,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2197">
+            <rdf:Description rdf:about="#G_SO0841">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000160"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q9X5X6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004504"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77302"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945909"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13355"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -136882,21 +137418,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1646" sboTerm="SBO:0000243" fbc:id="G_SO1646" fbc:name="G_SO1646" fbc:label="G_SO1646">
+      <fbc:geneProduct metaid="G_SO2434" sboTerm="SBO:0000243" fbc:id="G_SO2434" fbc:name="G_SO2434" fbc:label="G_SO2434">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0796" sboTerm="SBO:0000243" fbc:id="G_SO0796" fbc:name="G_SO0796" fbc:label="G_SO0796">
+      <fbc:geneProduct metaid="G_SO0859" sboTerm="SBO:0000243" fbc:id="G_SO0859" fbc:name="G_SO0859" fbc:label="G_SO0859">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0841" sboTerm="SBO:0000243" fbc:id="G_SO0841" fbc:name="G_SO0841" fbc:label="G_SO0841">
+      <fbc:geneProduct metaid="G_SO2174" sboTerm="SBO:0000243" fbc:id="G_SO2174" fbc:name="G_SO2174" fbc:label="G_SO2174">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -136904,55 +137440,52 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0841">
+            <rdf:Description rdf:about="#G_SO2174">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041913"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004504"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77302"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945909"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003472"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P75908"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG13866"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4425" sboTerm="SBO:0000243" fbc:id="G_SO4425" fbc:name="G_SO4425" fbc:label="G_SO4425">
+      <fbc:geneProduct metaid="G_SO2197" sboTerm="SBO:0000243" fbc:id="G_SO2197" fbc:name="G_SO2197" fbc:label="G_SO2197">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2197">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000160"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q9X5X6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173270"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0859" sboTerm="SBO:0000243" fbc:id="G_SO0859" fbc:name="G_SO0859" fbc:label="G_SO0859">
+      <fbc:geneProduct metaid="G_SO4425" sboTerm="SBO:0000243" fbc:id="G_SO4425" fbc:name="G_SO4425" fbc:label="G_SO4425">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3088" sboTerm="SBO:0000243" fbc:id="G_SO3088" fbc:name="G_SO3088" fbc:label="G_SO3088">
+      <fbc:geneProduct metaid="G_SO1646" sboTerm="SBO:0000243" fbc:id="G_SO1646" fbc:name="G_SO1646" fbc:label="G_SO1646">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3088">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007723"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77399"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949097"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14127"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4345" sboTerm="SBO:0000243" fbc:id="G_SO4345" fbc:name="G_SO4345" fbc:label="G_SO4345">
         <notes>
@@ -137037,6 +137570,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3263" sboTerm="SBO:0000243" fbc:id="G_SO3263" fbc:name="G_SO3263" fbc:label="G_SO3263">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3263">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020904"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182R6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182R6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7201861"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3646" sboTerm="SBO:0000243" fbc:id="G_SO3646" fbc:name="G_SO3646" fbc:label="G_SO3646">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137091,31 +137649,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3263" sboTerm="SBO:0000243" fbc:id="G_SO3263" fbc:name="G_SO3263" fbc:label="G_SO3263">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3263">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020904"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q182R6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q182R6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7201861"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3067" sboTerm="SBO:0000243" fbc:id="G_SO3067" fbc:name="G_SO3067" fbc:label="G_SO3067">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137254,6 +137787,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3148" sboTerm="SBO:0000243" fbc:id="G_SO3148" fbc:name="G_SO3148" fbc:label="G_SO3148">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3695" sboTerm="SBO:0000243" fbc:id="G_SO3695" fbc:name="G_SO3695" fbc:label="G_SO3695">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137275,13 +137815,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3148" sboTerm="SBO:0000243" fbc:id="G_SO3148" fbc:name="G_SO3148" fbc:label="G_SO3148">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1198" sboTerm="SBO:0000243" fbc:id="G_SO1198" fbc:name="G_SO1198" fbc:label="G_SO1198">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137436,13 +137969,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2402" sboTerm="SBO:0000243" fbc:id="G_SO2402" fbc:name="G_SO2402" fbc:label="G_SO2402">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3529" sboTerm="SBO:0000243" fbc:id="G_SO3529" fbc:name="G_SO3529" fbc:label="G_SO3529">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137469,6 +137995,20 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2402" sboTerm="SBO:0000243" fbc:id="G_SO2402" fbc:name="G_SO2402" fbc:label="G_SO2402">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4357" sboTerm="SBO:0000243" fbc:id="G_SO4357" fbc:name="G_SO4357" fbc:label="G_SO4357">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1429" sboTerm="SBO:0000243" fbc:id="G_SO1429" fbc:name="G_SO1429" fbc:label="G_SO1429">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137535,14 +138075,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4357" sboTerm="SBO:0000243" fbc:id="G_SO4357" fbc:name="G_SO4357" fbc:label="G_SO4357">
+      <fbc:geneProduct metaid="G_SO4510" sboTerm="SBO:0000243" fbc:id="G_SO4510" fbc:name="G_SO4510" fbc:label="G_SO4510">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4510" sboTerm="SBO:0000243" fbc:id="G_SO4510" fbc:name="G_SO4510" fbc:label="G_SO4510">
+      <fbc:geneProduct metaid="G_SO1979" sboTerm="SBO:0000243" fbc:id="G_SO1979" fbc:name="G_SO1979" fbc:label="G_SO1979">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -137574,14 +138114,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1979" sboTerm="SBO:0000243" fbc:id="G_SO1979" fbc:name="G_SO1979" fbc:label="G_SO1979">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3492" sboTerm="SBO:0000243" fbc:id="G_SO3492" fbc:name="G_SO3492" fbc:label="G_SO3492">
+      <fbc:geneProduct metaid="G_SO3493" sboTerm="SBO:0000243" fbc:id="G_SO3493" fbc:name="G_SO3493" fbc:label="G_SO3493">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -137589,18 +138122,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3492">
+            <rdf:Description rdf:about="#G_SO3493">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3493" sboTerm="SBO:0000243" fbc:id="G_SO3493" fbc:name="G_SO3493" fbc:label="G_SO3493">
+      <fbc:geneProduct metaid="G_SO3492" sboTerm="SBO:0000243" fbc:id="G_SO3492" fbc:name="G_SO3492" fbc:label="G_SO3492">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -137608,11 +138141,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3493">
+            <rdf:Description rdf:about="#G_SO3492">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046214"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -137665,31 +138198,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3817" sboTerm="SBO:0000243" fbc:id="G_SO3817" fbc:name="G_SO3817" fbc:label="G_SO3817">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3817">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013332"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCB2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175986"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4349" sboTerm="SBO:0000243" fbc:id="G_SO4349" fbc:name="G_SO4349" fbc:label="G_SO4349">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137717,6 +138225,31 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3817" sboTerm="SBO:0000243" fbc:id="G_SO3817" fbc:name="G_SO3817" fbc:label="G_SO3817">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3817">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008927"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013332"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WCB2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175986"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1217" sboTerm="SBO:0000243" fbc:id="G_SO1217" fbc:name="G_SO1217" fbc:label="G_SO1217">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -137987,6 +138520,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3088" sboTerm="SBO:0000243" fbc:id="G_SO3088" fbc:name="G_SO3088" fbc:label="G_SO3088">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3088">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007723"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P77399"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949097"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14127"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3908" sboTerm="SBO:0000243" fbc:id="G_SO3908" fbc:name="G_SO3908" fbc:label="G_SO3908">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138399,7 +138953,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0107" sboTerm="SBO:0000243" fbc:id="G_SO0107" fbc:name="G_SO0107" fbc:label="G_SO0107">
+      <fbc:geneProduct metaid="G_SO0101" sboTerm="SBO:0000243" fbc:id="G_SO0101" fbc:name="G_SO0101" fbc:label="G_SO0101">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138407,10 +138961,37 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0107">
+            <rdf:Description rdf:about="#G_SO0101">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888201"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24183"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946035"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012710"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32176"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948394"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11858"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0104" sboTerm="SBO:0000243" fbc:id="G_SO0104" fbc:name="G_SO0104" fbc:label="G_SO0104">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0104">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -138448,32 +139029,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0101" sboTerm="SBO:0000243" fbc:id="G_SO0101" fbc:name="G_SO0101" fbc:label="G_SO0101">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0101">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P24183"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946035"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11227"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012710"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32176"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948394"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11858"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4503" sboTerm="SBO:0000243" fbc:id="G_SO4503" fbc:name="G_SO4503" fbc:label="G_SO4503">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -138521,7 +139076,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0104" sboTerm="SBO:0000243" fbc:id="G_SO0104" fbc:name="G_SO0104" fbc:label="G_SO0104">
+      <fbc:geneProduct metaid="G_SO0107" sboTerm="SBO:0000243" fbc:id="G_SO0107" fbc:name="G_SO0107" fbc:label="G_SO0107">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138529,11 +139084,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0104">
+            <rdf:Description rdf:about="#G_SO0107">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044263"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888201"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -138701,7 +139255,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4564" sboTerm="SBO:0000243" fbc:id="G_SO4564" fbc:name="G_SO4564" fbc:label="G_SO4564">
+      <fbc:geneProduct metaid="G_SO0815" sboTerm="SBO:0000243" fbc:id="G_SO0815" fbc:name="G_SO0815" fbc:label="G_SO0815">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138709,24 +139263,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4564">
+            <rdf:Description rdf:about="#G_SO0815">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004196"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02929"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945843"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11012"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIM7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000531"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010917"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAA3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176753"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0815" sboTerm="SBO:0000243" fbc:id="G_SO0815" fbc:name="G_SO0815" fbc:label="G_SO0815">
+      <fbc:geneProduct metaid="G_SO4564" sboTerm="SBO:0000243" fbc:id="G_SO4564" fbc:name="G_SO4564" fbc:label="G_SO4564">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138734,16 +139287,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0815">
+            <rdf:Description rdf:about="#G_SO4564">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000531"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010917"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAA3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0004196"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P02929"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945843"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11012"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIM7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175027"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -138769,7 +139323,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1034" sboTerm="SBO:0000243" fbc:id="G_SO1034" fbc:name="G_SO1034" fbc:label="G_SO1034">
+      <fbc:geneProduct metaid="G_SO2525" sboTerm="SBO:0000243" fbc:id="G_SO2525" fbc:name="G_SO2525" fbc:label="G_SO2525">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138777,20 +139331,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1034">
+            <rdf:Description rdf:about="#G_SO2525">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34451"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183W2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183W2"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2525" sboTerm="SBO:0000243" fbc:id="G_SO2525" fbc:name="G_SO2525" fbc:label="G_SO2525">
+      <fbc:geneProduct metaid="G_SO1034" sboTerm="SBO:0000243" fbc:id="G_SO1034" fbc:name="G_SO1034" fbc:label="G_SO1034">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138798,15 +139354,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2525">
+            <rdf:Description rdf:about="#G_SO1034">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q183W2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q183W2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000522"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG14142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34451"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -138847,7 +139401,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0742" sboTerm="SBO:0000243" fbc:id="G_SO0742" fbc:name="G_SO0742" fbc:label="G_SO0742">
+      <fbc:geneProduct metaid="G_SO0744" sboTerm="SBO:0000243" fbc:id="G_SO0744" fbc:name="G_SO0744" fbc:label="G_SO0744">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138855,11 +139409,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0742">
+            <rdf:Description rdf:about="#G_SO0744">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045042"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -138873,7 +139427,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0744" sboTerm="SBO:0000243" fbc:id="G_SO0744" fbc:name="G_SO0744" fbc:label="G_SO0744">
+      <fbc:geneProduct metaid="G_SO0742" sboTerm="SBO:0000243" fbc:id="G_SO0742" fbc:name="G_SO0742" fbc:label="G_SO0742">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -138881,11 +139435,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0744">
+            <rdf:Description rdf:about="#G_SO0742">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045042"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045042"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -139483,13 +140037,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3807" sboTerm="SBO:0000243" fbc:id="G_SO3807" fbc:name="G_SO3807" fbc:label="G_SO3807">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4602" sboTerm="SBO:0000243" fbc:id="G_SO4602" fbc:name="G_SO4602" fbc:label="G_SO4602">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139516,6 +140063,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3807" sboTerm="SBO:0000243" fbc:id="G_SO3807" fbc:name="G_SO3807" fbc:label="G_SO3807">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0978" sboTerm="SBO:0000243" fbc:id="G_SO0978" fbc:name="G_SO0978" fbc:label="G_SO0978">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139782,7 +140336,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2347" sboTerm="SBO:0000243" fbc:id="G_SO2347" fbc:name="G_SO2347" fbc:label="G_SO2347">
+      <fbc:geneProduct metaid="G_SO0538" sboTerm="SBO:0000243" fbc:id="G_SO0538" fbc:name="G_SO0538" fbc:label="G_SO0538">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -139790,11 +140344,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2347">
+            <rdf:Description rdf:about="#G_SO0538">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045004"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000173"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7198606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006424"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020828"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020830"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020831"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10827"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P09124"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -139820,7 +140382,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0538" sboTerm="SBO:0000243" fbc:id="G_SO0538" fbc:name="G_SO0538" fbc:label="G_SO0538">
+      <fbc:geneProduct metaid="G_SO2347" sboTerm="SBO:0000243" fbc:id="G_SO2347" fbc:name="G_SO2347" fbc:label="G_SO2347">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -139828,19 +140390,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0538">
+            <rdf:Description rdf:about="#G_SO2347">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000173"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7198606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006424"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016040"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020828"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020830"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR020831"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10827"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P09124"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045004"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045004"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -139955,6 +140509,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3506" sboTerm="SBO:0000243" fbc:id="G_SO3506" fbc:name="G_SO3506" fbc:label="G_SO3506">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3506">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001347"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005855"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017932"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CK9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CK9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896981"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4741" sboTerm="SBO:0000243" fbc:id="G_SO4741" fbc:name="G_SO4741" fbc:label="G_SO4741">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -139983,30 +140561,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3506" sboTerm="SBO:0000243" fbc:id="G_SO3506" fbc:name="G_SO3506" fbc:label="G_SO3506">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3506">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001347"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005855"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017932"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR029055"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q18CK9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q18CK9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/896981"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1267" sboTerm="SBO:0000243" fbc:id="G_SO1267" fbc:name="G_SO1267" fbc:label="G_SO1267">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140047,7 +140601,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1274" sboTerm="SBO:0000243" fbc:id="G_SO1274" fbc:name="G_SO1274" fbc:label="G_SO1274">
+      <fbc:geneProduct metaid="G_SO1264" sboTerm="SBO:0000243" fbc:id="G_SO1264" fbc:name="G_SO1264" fbc:label="G_SO1264">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140055,18 +140609,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1274">
+            <rdf:Description rdf:about="#G_SO1264">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1264" sboTerm="SBO:0000243" fbc:id="G_SO1264" fbc:name="G_SO1264" fbc:label="G_SO1264">
+      <fbc:geneProduct metaid="G_SO1274" sboTerm="SBO:0000243" fbc:id="G_SO1274" fbc:name="G_SO1274" fbc:label="G_SO1274">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140074,13 +140630,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1264">
+            <rdf:Description rdf:about="#G_SO1274">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046793"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042289"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045617"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -140660,32 +141214,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0780" sboTerm="SBO:0000243" fbc:id="G_SO0780" fbc:name="G_SO0780" fbc:label="G_SO0780">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0780">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009534"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6T9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947393"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10371"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002930"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WID4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173742"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0781" sboTerm="SBO:0000243" fbc:id="G_SO0781" fbc:name="G_SO0781" fbc:label="G_SO0781">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140738,6 +141266,32 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0780" sboTerm="SBO:0000243" fbc:id="G_SO0780" fbc:name="G_SO0780" fbc:label="G_SO0780">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0780">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009534"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6T9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947393"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10371"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR002930"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WID4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173742"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3631" sboTerm="SBO:0000243" fbc:id="G_SO3631" fbc:name="G_SO3631" fbc:label="G_SO3631">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -140778,7 +141332,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4600" sboTerm="SBO:0000243" fbc:id="G_SO4600" fbc:name="G_SO4600" fbc:label="G_SO4600">
+      <fbc:geneProduct metaid="G_SO2793" sboTerm="SBO:0000243" fbc:id="G_SO2793" fbc:name="G_SO2793" fbc:label="G_SO2793">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140786,17 +141340,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4600">
+            <rdf:Description rdf:about="#G_SO2793">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887732"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885093"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2793" sboTerm="SBO:0000243" fbc:id="G_SO2793" fbc:name="G_SO2793" fbc:label="G_SO2793">
+      <fbc:geneProduct metaid="G_SO4600" sboTerm="SBO:0000243" fbc:id="G_SO4600" fbc:name="G_SO4600" fbc:label="G_SO4600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -140804,10 +141358,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2793">
+            <rdf:Description rdf:about="#G_SO4600">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/885093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887732"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141147,7 +141701,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3349" sboTerm="SBO:0000243" fbc:id="G_SO3349" fbc:name="G_SO3349" fbc:label="G_SO3349">
+      <fbc:geneProduct metaid="G_SO3341" sboTerm="SBO:0000243" fbc:id="G_SO3341" fbc:name="G_SO3341" fbc:label="G_SO3341">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141155,18 +141709,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3349">
+            <rdf:Description rdf:about="#G_SO3341">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/604769"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hprd/05305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/10935"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS7611.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/600538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hprd/02763"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS12281.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS29944.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3341" sboTerm="SBO:0000243" fbc:id="G_SO3341" fbc:name="G_SO3341" fbc:label="G_SO3341">
+      <fbc:geneProduct metaid="G_SO3349" sboTerm="SBO:0000243" fbc:id="G_SO3349" fbc:name="G_SO3349" fbc:label="G_SO3349">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141174,19 +141736,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3341">
+            <rdf:Description rdf:about="#G_SO3349">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/604769"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hprd/05305"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/10935"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS7611.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/600538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hprd/02763"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/7001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS12281.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/11757"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS29944.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043746"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141364,7 +141918,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1551" sboTerm="SBO:0000243" fbc:id="G_SO1551" fbc:name="G_SO1551" fbc:label="G_SO1551">
+      <fbc:geneProduct metaid="G_SO3759" sboTerm="SBO:0000243" fbc:id="G_SO3759" fbc:name="G_SO3759" fbc:label="G_SO3759">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141372,11 +141926,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1551">
+            <rdf:Description rdf:about="#G_SO3759">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043626"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141402,7 +141956,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3759" sboTerm="SBO:0000243" fbc:id="G_SO3759" fbc:name="G_SO3759" fbc:label="G_SO3759">
+      <fbc:geneProduct metaid="G_SO1551" sboTerm="SBO:0000243" fbc:id="G_SO1551" fbc:name="G_SO1551" fbc:label="G_SO1551">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141410,11 +141964,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3759">
+            <rdf:Description rdf:about="#G_SO1551">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043626"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043626"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141509,27 +142063,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2754" sboTerm="SBO:0000243" fbc:id="G_SO2754" fbc:name="G_SO2754" fbc:label="G_SO2754">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2754">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A910"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10669"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SOA0114" sboTerm="SBO:0000243" fbc:id="G_SOA0114" fbc:name="G_SOA0114" fbc:label="G_SOA0114">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141561,6 +142094,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2754" sboTerm="SBO:0000243" fbc:id="G_SO2754" fbc:name="G_SO2754" fbc:label="G_SO2754">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2754">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A910"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10669"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1307" sboTerm="SBO:0000243" fbc:id="G_SO1307" fbc:name="G_SO1307" fbc:label="G_SO1307">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141749,7 +142303,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4374" sboTerm="SBO:0000243" fbc:id="G_SO4374" fbc:name="G_SO4374" fbc:label="G_SO4374">
+      <fbc:geneProduct metaid="G_SO0098" sboTerm="SBO:0000243" fbc:id="G_SO0098" fbc:name="G_SO0098" fbc:label="G_SO0098">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141757,19 +142311,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4374">
+            <rdf:Description rdf:about="#G_SO0098">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100753802"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/15109"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS36036.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042841"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0098" sboTerm="SBO:0000243" fbc:id="G_SO0098" fbc:name="G_SO0098" fbc:label="G_SO0098">
+      <fbc:geneProduct metaid="G_SO3057" sboTerm="SBO:0000243" fbc:id="G_SO3057" fbc:name="G_SO3057" fbc:label="G_SO3057">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141777,18 +142330,23 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0098">
+            <rdf:Description rdf:about="#G_SO3057">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042841"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042841"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005921"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008948"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR022313"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024083"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P10944"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3057" sboTerm="SBO:0000243" fbc:id="G_SO3057" fbc:name="G_SO3057" fbc:label="G_SO3057">
+      <fbc:geneProduct metaid="G_SO4374" sboTerm="SBO:0000243" fbc:id="G_SO4374" fbc:name="G_SO4374" fbc:label="G_SO4374">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -141796,16 +142354,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3057">
+            <rdf:Description rdf:about="#G_SO4374">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001106"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005921"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008948"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR022313"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024083"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG10667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P10944"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100753802"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/15109"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS36036.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -141956,6 +142510,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0122" sboTerm="SBO:0000243" fbc:id="G_SO0122" fbc:name="G_SO0122" fbc:label="G_SO0122">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0122">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG34"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11469"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001123"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKX7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176666"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1954" sboTerm="SBO:0000243" fbc:id="G_SO1954" fbc:name="G_SO1954" fbc:label="G_SO1954">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -141984,30 +142562,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0122" sboTerm="SBO:0000243" fbc:id="G_SO0122" fbc:name="G_SO0122" fbc:label="G_SO0122">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0122">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012490"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AG34"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948316"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11469"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001123"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKX7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176666"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2771" sboTerm="SBO:0000243" fbc:id="G_SO2771" fbc:name="G_SO2771" fbc:label="G_SO2771">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142034,7 +142588,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1292" sboTerm="SBO:0000243" fbc:id="G_SO1292" fbc:name="G_SO1292" fbc:label="G_SO1292">
+      <fbc:geneProduct metaid="G_SO0871" sboTerm="SBO:0000243" fbc:id="G_SO0871" fbc:name="G_SO0871" fbc:label="G_SO0871">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142042,18 +142596,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1292">
+            <rdf:Description rdf:about="#G_SO0871">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044106"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045101"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000491"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P26281"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948792"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000550"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKD7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176217"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0871" sboTerm="SBO:0000243" fbc:id="G_SO0871" fbc:name="G_SO0871" fbc:label="G_SO0871">
+      <fbc:geneProduct metaid="G_SO1292" sboTerm="SBO:0000243" fbc:id="G_SO1292" fbc:name="G_SO1292" fbc:label="G_SO1292">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142061,18 +142622,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0871">
+            <rdf:Description rdf:about="#G_SO1292">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000491"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P26281"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948792"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000550"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKD7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176217"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044106"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044106"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142225,7 +142779,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2096" sboTerm="SBO:0000243" fbc:id="G_SO2096" fbc:name="G_SO2096" fbc:label="G_SO2096">
+      <fbc:geneProduct metaid="G_SO2097" sboTerm="SBO:0000243" fbc:id="G_SO2097" fbc:name="G_SO2097" fbc:label="G_SO2097">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142233,17 +142787,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2096">
+            <rdf:Description rdf:about="#G_SO2097">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898931"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2097" sboTerm="SBO:0000243" fbc:id="G_SO2097" fbc:name="G_SO2097" fbc:label="G_SO2097">
+      <fbc:geneProduct metaid="G_SO2096" sboTerm="SBO:0000243" fbc:id="G_SO2096" fbc:name="G_SO2096" fbc:label="G_SO2096">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142251,10 +142805,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2097">
+            <rdf:Description rdf:about="#G_SO2096">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/898931"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/900014"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142379,7 +142933,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2070" sboTerm="SBO:0000243" fbc:id="G_SO2070" fbc:name="G_SO2070" fbc:label="G_SO2070">
+      <fbc:geneProduct metaid="G_SO2068" sboTerm="SBO:0000243" fbc:id="G_SO2068" fbc:name="G_SO2068" fbc:label="G_SO2068">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142387,27 +142941,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2070">
+            <rdf:Description rdf:about="#G_SO2068">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006722"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60595"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10450"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000991"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006220"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010139"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011702"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012998"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WGM7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174384"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006727"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60664"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946516"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004651"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006062"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011060"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WGM9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174382"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2068" sboTerm="SBO:0000243" fbc:id="G_SO2068" fbc:name="G_SO2068" fbc:label="G_SO2068">
+      <fbc:geneProduct metaid="G_SO2070" sboTerm="SBO:0000243" fbc:id="G_SO2070" fbc:name="G_SO2070" fbc:label="G_SO2070">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142415,18 +142967,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2068">
+            <rdf:Description rdf:about="#G_SO2070">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006727"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60664"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946516"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004651"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006062"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011060"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WGM9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006722"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P60595"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10450"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000991"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006220"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010139"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011702"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012998"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WGM7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174384"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142612,7 +143166,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3461" sboTerm="SBO:0000243" fbc:id="G_SO3461" fbc:name="G_SO3461" fbc:label="G_SO3461">
+      <fbc:geneProduct metaid="G_SO2620" sboTerm="SBO:0000243" fbc:id="G_SO2620" fbc:name="G_SO2620" fbc:label="G_SO2620">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142620,18 +143174,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3461">
+            <rdf:Description rdf:about="#G_SO2620">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045585"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044829"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2620" sboTerm="SBO:0000243" fbc:id="G_SO2620" fbc:name="G_SO2620" fbc:label="G_SO2620">
+      <fbc:geneProduct metaid="G_SO3461" sboTerm="SBO:0000243" fbc:id="G_SO3461" fbc:name="G_SO3461" fbc:label="G_SO3461">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142639,11 +143193,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2620">
+            <rdf:Description rdf:about="#G_SO3461">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044829"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044829"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045585"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045585"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142701,7 +143255,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4233" sboTerm="SBO:0000243" fbc:id="G_SO4233" fbc:name="G_SO4233" fbc:label="G_SO4233">
+      <fbc:geneProduct metaid="G_SO4234" sboTerm="SBO:0000243" fbc:id="G_SO4234" fbc:name="G_SO4234" fbc:label="G_SO4234">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142709,25 +143263,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4233">
+            <rdf:Description rdf:about="#G_SO4234">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000259"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30126"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945642"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11575"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004431"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012305"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJD6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173375"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000261"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001030"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004430"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJD5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173376"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4234" sboTerm="SBO:0000243" fbc:id="G_SO4234" fbc:name="G_SO4234" fbc:label="G_SO4234">
+      <fbc:geneProduct metaid="G_SO4233" sboTerm="SBO:0000243" fbc:id="G_SO4233" fbc:name="G_SO4233" fbc:label="G_SO4233">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -142735,18 +143289,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4234">
+            <rdf:Description rdf:about="#G_SO4233">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000261"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A6A6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945076"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11576"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001030"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004430"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJD5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000259"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30126"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945642"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11575"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004431"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012305"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJD6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173375"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -142815,30 +143369,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2853" sboTerm="SBO:0000243" fbc:id="G_SO2853" fbc:name="G_SO2853" fbc:label="G_SO2853">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2853">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013747"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013751"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13127"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/O34746"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4383" sboTerm="SBO:0000243" fbc:id="G_SO4383" fbc:name="G_SO4383" fbc:label="G_SO4383">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -142879,6 +143409,30 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2853" sboTerm="SBO:0000243" fbc:id="G_SO2853" fbc:name="G_SO2853" fbc:label="G_SO2853">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2853">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013747"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013751"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR016039"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG13127"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/O34746"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2478" sboTerm="SBO:0000243" fbc:id="G_SO2478" fbc:name="G_SO2478" fbc:label="G_SO2478">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143162,7 +143716,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0695" sboTerm="SBO:0000243" fbc:id="G_SO0695" fbc:name="G_SO0695" fbc:label="G_SO0695">
+      <fbc:geneProduct metaid="G_SO1481" sboTerm="SBO:0000243" fbc:id="G_SO1481" fbc:name="G_SO1481" fbc:label="G_SO1481">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143170,21 +143724,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0695">
+            <rdf:Description rdf:about="#G_SO1481">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004771"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK01"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175913"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000161"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P03819"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10521"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1481" sboTerm="SBO:0000243" fbc:id="G_SO1481" fbc:name="G_SO1481" fbc:label="G_SO1481">
+      <fbc:geneProduct metaid="G_SO0695" sboTerm="SBO:0000243" fbc:id="G_SO0695" fbc:name="G_SO0695" fbc:label="G_SO0695">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143192,13 +143745,14 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1481">
+            <rdf:Description rdf:about="#G_SO0695">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000161"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P03819"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10521"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003148"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004771"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK01"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175913"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143224,13 +143778,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1647" sboTerm="SBO:0000243" fbc:id="G_SO1647" fbc:name="G_SO1647" fbc:label="G_SO1647">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2280" sboTerm="SBO:0000243" fbc:id="G_SO2280" fbc:name="G_SO2280" fbc:label="G_SO2280">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143256,6 +143803,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1647" sboTerm="SBO:0000243" fbc:id="G_SO1647" fbc:name="G_SO1647" fbc:label="G_SO1647">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1277" sboTerm="SBO:0000243" fbc:id="G_SO1277" fbc:name="G_SO1277" fbc:label="G_SO1277">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143490,7 +144044,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1483" sboTerm="SBO:0000243" fbc:id="G_SO1483" fbc:name="G_SO1483" fbc:label="G_SO1483">
+      <fbc:geneProduct metaid="G_SO4706" sboTerm="SBO:0000243" fbc:id="G_SO4706" fbc:name="G_SO4706" fbc:label="G_SO4706">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143498,25 +144052,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1483">
+            <rdf:Description rdf:about="#G_SO4706">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013125"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08997"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948512"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10023"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001465"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006252"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011076"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAT2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044063"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009767"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37330"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948857"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20080"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4706" sboTerm="SBO:0000243" fbc:id="G_SO4706" fbc:name="G_SO4706" fbc:label="G_SO4706">
+      <fbc:geneProduct metaid="G_SO1483" sboTerm="SBO:0000243" fbc:id="G_SO1483" fbc:name="G_SO1483" fbc:label="G_SO1483">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143524,15 +144075,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4706">
+            <rdf:Description rdf:about="#G_SO1483">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044063"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0009767"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37330"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948857"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20080"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013125"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P08997"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948512"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10023"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001465"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011076"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WAT2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176545"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143612,7 +144166,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1896" sboTerm="SBO:0000243" fbc:id="G_SO1896" fbc:name="G_SO1896" fbc:label="G_SO1896">
+      <fbc:geneProduct metaid="G_SO1894" sboTerm="SBO:0000243" fbc:id="G_SO1894" fbc:name="G_SO1894" fbc:label="G_SO1894">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143620,25 +144174,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1896">
+            <rdf:Description rdf:about="#G_SO1894">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/omim/609014"/>
-                  <rdf:li rdf:resource="http://identifiers.org/hprd/01952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/64087"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS34184.1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100756739"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/78038"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS36764.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042147"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1894" sboTerm="SBO:0000243" fbc:id="G_SO1894" fbc:name="G_SO1894" fbc:label="G_SO1894">
+      <fbc:geneProduct metaid="G_SO1896" sboTerm="SBO:0000243" fbc:id="G_SO1896" fbc:name="G_SO1896" fbc:label="G_SO1896">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143646,11 +144193,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1894">
+            <rdf:Description rdf:about="#G_SO1896">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042147"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042147"/>
+                  <rdf:li rdf:resource="http://identifiers.org/omim/609014"/>
+                  <rdf:li rdf:resource="http://identifiers.org/hprd/01952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/64087"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS34184.1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/100756739"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042156"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/78038"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ccds/CCDS36764.1"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143722,32 +144276,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4225" sboTerm="SBO:0000243" fbc:id="G_SO4225" fbc:name="G_SO4225" fbc:label="G_SO4225">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4225">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000309"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD68"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944799"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10341"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005311"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CGA8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173393"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0633" sboTerm="SBO:0000243" fbc:id="G_SO0633" fbc:name="G_SO0633" fbc:label="G_SO0633">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -143804,7 +144332,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1168" sboTerm="SBO:0000243" fbc:id="G_SO1168" fbc:name="G_SO1168" fbc:label="G_SO1168">
+      <fbc:geneProduct metaid="G_SO4225" sboTerm="SBO:0000243" fbc:id="G_SO4225" fbc:name="G_SO4225" fbc:label="G_SO4225">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143812,25 +144340,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1168">
+            <rdf:Description rdf:about="#G_SO4225">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002178"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD65"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945240"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000309"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD68"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944799"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10341"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001460"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005311"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJV5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175433"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CGA8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173393"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1899" sboTerm="SBO:0000243" fbc:id="G_SO1899" fbc:name="G_SO1899" fbc:label="G_SO1899">
+      <fbc:geneProduct metaid="G_SO1168" sboTerm="SBO:0000243" fbc:id="G_SO1168" fbc:name="G_SO1168" fbc:label="G_SO1168">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143838,20 +144366,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1899">
+            <rdf:Description rdf:about="#G_SO1168">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22525"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11253"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AD65"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945240"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005311"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJV5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175433"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2394" sboTerm="SBO:0000243" fbc:id="G_SO2394" fbc:name="G_SO2394" fbc:label="G_SO2394">
+      <fbc:geneProduct metaid="G_SO1899" sboTerm="SBO:0000243" fbc:id="G_SO1899" fbc:name="G_SO1899" fbc:label="G_SO1899">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143859,13 +144392,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2394">
+            <rdf:Description rdf:about="#G_SO1899">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKJ3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176325"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P22525"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11253"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143902,7 +144435,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0999" sboTerm="SBO:0000243" fbc:id="G_SO0999" fbc:name="G_SO0999" fbc:label="G_SO0999">
+      <fbc:geneProduct metaid="G_SO2394" sboTerm="SBO:0000243" fbc:id="G_SO2394" fbc:name="G_SO2394" fbc:label="G_SO2394">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -143910,19 +144443,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0999">
+            <rdf:Description rdf:about="#G_SO2394">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007050"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946662"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12015"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000667"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH74"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKJ3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176325"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -143950,6 +144477,33 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0999" sboTerm="SBO:0000243" fbc:id="G_SO0999" fbc:name="G_SO0999" fbc:label="G_SO0999">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0999">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007050"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946662"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12015"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001967"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH74"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174025"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0770" sboTerm="SBO:0000243" fbc:id="G_SO0770" fbc:name="G_SO0770" fbc:label="G_SO0770">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144265,12 +144819,28 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2588" sboTerm="SBO:0000243" fbc:id="G_SO2588" fbc:name="G_SO2588" fbc:label="G_SO2588">
+      <fbc:geneProduct metaid="G_SO2603" sboTerm="SBO:0000243" fbc:id="G_SO2603" fbc:name="G_SO2603" fbc:label="G_SO2603">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2603">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006095"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76270"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946086"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14020"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2337" sboTerm="SBO:0000243" fbc:id="G_SO2337" fbc:name="G_SO2337" fbc:label="G_SO2337">
         <notes>
@@ -144307,28 +144877,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2603" sboTerm="SBO:0000243" fbc:id="G_SO2603" fbc:name="G_SO2603" fbc:label="G_SO2603">
+      <fbc:geneProduct metaid="G_SO2588" sboTerm="SBO:0000243" fbc:id="G_SO2588" fbc:name="G_SO2588" fbc:label="G_SO2588">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2603">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0006095"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76270"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946086"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14020"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1087" sboTerm="SBO:0000243" fbc:id="G_SO1087" fbc:name="G_SO1087" fbc:label="G_SO1087">
         <notes>
@@ -144411,13 +144965,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4538" sboTerm="SBO:0000243" fbc:id="G_SO4538" fbc:name="G_SO4538" fbc:label="G_SO4538">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3433" sboTerm="SBO:0000243" fbc:id="G_SO3433" fbc:name="G_SO3433" fbc:label="G_SO3433">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -144425,21 +144972,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4811" sboTerm="SBO:0000243" fbc:id="G_SO4811" fbc:name="G_SO4811" fbc:label="G_SO4811">
+      <fbc:geneProduct metaid="G_SO2869" sboTerm="SBO:0000243" fbc:id="G_SO2869" fbc:name="G_SO2869" fbc:label="G_SO2869">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2869" sboTerm="SBO:0000243" fbc:id="G_SO2869" fbc:name="G_SO2869" fbc:label="G_SO2869">
+      <fbc:geneProduct metaid="G_SO4538" sboTerm="SBO:0000243" fbc:id="G_SO4538" fbc:name="G_SO4538" fbc:label="G_SO4538">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4212" sboTerm="SBO:0000243" fbc:id="G_SO4212" fbc:name="G_SO4212" fbc:label="G_SO4212">
+      <fbc:geneProduct metaid="G_SO4811" sboTerm="SBO:0000243" fbc:id="G_SO4811" fbc:name="G_SO4811" fbc:label="G_SO4811">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144453,21 +145000,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0048" sboTerm="SBO:0000243" fbc:id="G_SO0048" fbc:name="G_SO0048" fbc:label="G_SO0048">
+      <fbc:geneProduct metaid="G_SO4212" sboTerm="SBO:0000243" fbc:id="G_SO4212" fbc:name="G_SO4212" fbc:label="G_SO4212">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4660" sboTerm="SBO:0000243" fbc:id="G_SO4660" fbc:name="G_SO4660" fbc:label="G_SO4660">
+      <fbc:geneProduct metaid="G_SO0048" sboTerm="SBO:0000243" fbc:id="G_SO0048" fbc:name="G_SO0048" fbc:label="G_SO0048">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1994" sboTerm="SBO:0000243" fbc:id="G_SO1994" fbc:name="G_SO1994" fbc:label="G_SO1994">
+      <fbc:geneProduct metaid="G_SO2564" sboTerm="SBO:0000243" fbc:id="G_SO2564" fbc:name="G_SO2564" fbc:label="G_SO2564">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144475,19 +145022,27 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1994">
+            <rdf:Description rdf:about="#G_SO2564">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011757"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJD8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175775"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000704"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEZ7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10246"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2564" sboTerm="SBO:0000243" fbc:id="G_SO2564" fbc:name="G_SO2564" fbc:label="G_SO2564">
+      <fbc:geneProduct metaid="G_SO4660" sboTerm="SBO:0000243" fbc:id="G_SO4660" fbc:name="G_SO4660" fbc:label="G_SO4660">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3288" sboTerm="SBO:0000243" fbc:id="G_SO3288" fbc:name="G_SO3288" fbc:label="G_SO3288">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144495,20 +145050,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2564">
+            <rdf:Description rdf:about="#G_SO3288">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000704"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEZ7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10246"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947028"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11373"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1166" sboTerm="SBO:0000243" fbc:id="G_SO1166" fbc:name="G_SO1166" fbc:label="G_SO1166">
+      <fbc:geneProduct metaid="G_SO1994" sboTerm="SBO:0000243" fbc:id="G_SO1994" fbc:name="G_SO1994" fbc:label="G_SO1994">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144516,11 +145071,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1166">
+            <rdf:Description rdf:about="#G_SO1994">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJD8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175775"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144557,7 +145113,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3288" sboTerm="SBO:0000243" fbc:id="G_SO3288" fbc:name="G_SO3288" fbc:label="G_SO3288">
+      <fbc:geneProduct metaid="G_SO2614" sboTerm="SBO:0000243" fbc:id="G_SO2614" fbc:name="G_SO2614" fbc:label="G_SO2614">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144565,20 +145121,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3288">
+            <rdf:Description rdf:about="#G_SO2614">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGC5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947028"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11373"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003712"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28306"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11494"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2614" sboTerm="SBO:0000243" fbc:id="G_SO2614" fbc:name="G_SO2614" fbc:label="G_SO2614">
+      <fbc:geneProduct metaid="G_SO1166" sboTerm="SBO:0000243" fbc:id="G_SO1166" fbc:name="G_SO1166" fbc:label="G_SO1166">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144586,13 +145142,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2614">
+            <rdf:Description rdf:about="#G_SO1166">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003712"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28306"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945660"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11494"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043075"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144700,21 +145254,21 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3967" sboTerm="SBO:0000243" fbc:id="G_SO3967" fbc:name="G_SO3967" fbc:label="G_SO3967">
+      <fbc:geneProduct metaid="G_SO1799" sboTerm="SBO:0000243" fbc:id="G_SO1799" fbc:name="G_SO1799" fbc:label="G_SO1799">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1799" sboTerm="SBO:0000243" fbc:id="G_SO1799" fbc:name="G_SO1799" fbc:label="G_SO1799">
+      <fbc:geneProduct metaid="G_SO3967" sboTerm="SBO:0000243" fbc:id="G_SO3967" fbc:name="G_SO3967" fbc:label="G_SO3967">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3863" sboTerm="SBO:0000243" fbc:id="G_SO3863" fbc:name="G_SO3863" fbc:label="G_SO3863">
+      <fbc:geneProduct metaid="G_SO3865" sboTerm="SBO:0000243" fbc:id="G_SO3865" fbc:name="G_SO3865" fbc:label="G_SO3865">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144722,18 +145276,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3863">
+            <rdf:Description rdf:about="#G_SO3865">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37329"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945364"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12427"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005950"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011587"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHQ4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173994"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002605"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004606"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005116"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011868"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHQ2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173996"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144765,7 +145322,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3600" sboTerm="SBO:0000243" fbc:id="G_SO3600" fbc:name="G_SO3600" fbc:label="G_SO3600">
+      <fbc:geneProduct metaid="G_SO3863" sboTerm="SBO:0000243" fbc:id="G_SO3863" fbc:name="G_SO3863" fbc:label="G_SO3863">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144773,25 +145330,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3600">
+            <rdf:Description rdf:about="#G_SO3863">
               <bqbiol:is>
                 <rdf:Bag>
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-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946882"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10197"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011865"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJH1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175836"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002601"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37329"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945364"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005950"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006059"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHQ4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173994"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4447" sboTerm="SBO:0000243" fbc:id="G_SO4447" fbc:name="G_SO4447" fbc:label="G_SO4447">
+      <fbc:geneProduct metaid="G_SO4448" sboTerm="SBO:0000243" fbc:id="G_SO4448" fbc:name="G_SO4448" fbc:label="G_SO4448">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144799,18 +145356,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4447">
+            <rdf:Description rdf:about="#G_SO4448">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046737"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3601" sboTerm="SBO:0000243" fbc:id="G_SO3601" fbc:name="G_SO3601" fbc:label="G_SO3601">
+      <fbc:geneProduct metaid="G_SO4447" sboTerm="SBO:0000243" fbc:id="G_SO4447" fbc:name="G_SO4447" fbc:label="G_SO4447">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144818,25 +145375,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3601">
+            <rdf:Description rdf:about="#G_SO4447">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007988"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEB0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847743"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10198"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005667"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011866"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJH0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175835"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046736"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3865" sboTerm="SBO:0000243" fbc:id="G_SO3865" fbc:name="G_SO3865" fbc:label="G_SO3865">
+      <fbc:geneProduct metaid="G_SO3601" sboTerm="SBO:0000243" fbc:id="G_SO3601" fbc:name="G_SO3601" fbc:label="G_SO3601">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144844,28 +145394,25 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3865">
+            <rdf:Description rdf:about="#G_SO3601">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002605"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P09833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945362"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10152"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004606"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005116"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008995"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011868"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WHQ2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173996"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007988"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AEB0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/2847743"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10198"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011866"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJH0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175835"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4448" sboTerm="SBO:0000243" fbc:id="G_SO4448" fbc:name="G_SO4448" fbc:label="G_SO4448">
+      <fbc:geneProduct metaid="G_SO3600" sboTerm="SBO:0000243" fbc:id="G_SO3600" fbc:name="G_SO3600" fbc:label="G_SO3600">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144873,11 +145420,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4448">
+            <rdf:Description rdf:about="#G_SO3600">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046737"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046737"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007990"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P16701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946882"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10197"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005667"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJH1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175836"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -144933,7 +145487,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0067" sboTerm="SBO:0000243" fbc:id="G_SO0067" fbc:name="G_SO0067" fbc:label="G_SO0067">
+      <fbc:geneProduct metaid="G_SO3735" sboTerm="SBO:0000243" fbc:id="G_SO3735" fbc:name="G_SO3735" fbc:label="G_SO3735">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144941,22 +145495,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0067">
+            <rdf:Description rdf:about="#G_SO3735">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044365"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044365"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008294"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76577"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947152"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14210"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041810"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010530"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46022"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947728"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12808"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4220" sboTerm="SBO:0000243" fbc:id="G_SO4220" fbc:name="G_SO4220" fbc:label="G_SO4220">
+      <fbc:geneProduct metaid="G_SO0067" sboTerm="SBO:0000243" fbc:id="G_SO0067" fbc:name="G_SO0067" fbc:label="G_SO0067">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -144964,13 +145518,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4220">
+            <rdf:Description rdf:about="#G_SO0067">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000320"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABG4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044365"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0008294"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P76577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947152"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG14210"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145000,7 +145556,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3735" sboTerm="SBO:0000243" fbc:id="G_SO3735" fbc:name="G_SO3735" fbc:label="G_SO3735">
+      <fbc:geneProduct metaid="G_SO4220" sboTerm="SBO:0000243" fbc:id="G_SO4220" fbc:name="G_SO4220" fbc:label="G_SO4220">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145008,15 +145564,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3735">
+            <rdf:Description rdf:about="#G_SO4220">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041810"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041810"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0010530"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P46022"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947728"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12808"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000320"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABG4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10344"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145145,7 +145699,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1011" sboTerm="SBO:0000243" fbc:id="G_SO1011" fbc:name="G_SO1011" fbc:label="G_SO1011">
+      <fbc:geneProduct metaid="G_SO1019" sboTerm="SBO:0000243" fbc:id="G_SO1019" fbc:name="G_SO1019" fbc:label="G_SO1019">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145153,28 +145707,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1011">
+            <rdf:Description rdf:about="#G_SO1019">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007532"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33607"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945540"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12092"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001516"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003916"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003945"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ86"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175376"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007549"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33599"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12084"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001268"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010218"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010219"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ92"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175384"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1012" sboTerm="SBO:0000243" fbc:id="G_SO1012" fbc:name="G_SO1012" fbc:label="G_SO1012">
+      <fbc:geneProduct metaid="G_SO1021" sboTerm="SBO:0000243" fbc:id="G_SO1021" fbc:name="G_SO1021" fbc:label="G_SO1021">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145182,16 +145736,126 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1012">
+            <rdf:Description rdf:about="#G_SO1021">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001133"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003214"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003215"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ87"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175377"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007553"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946764"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12082"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDX2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175386"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1015" sboTerm="SBO:0000243" fbc:id="G_SO1015" fbc:name="G_SO1015" fbc:label="G_SO1015">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1015">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007541"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFD4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946761"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001694"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDX8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175380"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1017" sboTerm="SBO:0000243" fbc:id="G_SO1017" fbc:name="G_SO1017" fbc:label="G_SO1017">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1017">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007545"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31979"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946753"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11774"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001949"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011537"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011538"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ91"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175382"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1020" sboTerm="SBO:0000243" fbc:id="G_SO1020" fbc:name="G_SO1020" fbc:label="G_SO1020">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1020">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007551"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946738"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12083"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006137"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ93"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175385"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1009" sboTerm="SBO:0000243" fbc:id="G_SO1009" fbc:name="G_SO1009" fbc:label="G_SO1009">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1009">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007526"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFF0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945136"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001750"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010096"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ84"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175374"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145226,7 +145890,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1015" sboTerm="SBO:0000243" fbc:id="G_SO1015" fbc:name="G_SO1015" fbc:label="G_SO1015">
+      <fbc:geneProduct metaid="G_SO1012" sboTerm="SBO:0000243" fbc:id="G_SO1012" fbc:name="G_SO1012" fbc:label="G_SO1012">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145234,18 +145898,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1015">
+            <rdf:Description rdf:about="#G_SO1012">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042266"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007541"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFD4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946761"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12088"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001694"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDX8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175380"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042272"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001133"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003214"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ87"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175377"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145285,60 +145947,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1020" sboTerm="SBO:0000243" fbc:id="G_SO1020" fbc:name="G_SO1020" fbc:label="G_SO1020">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1020">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042262"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007551"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946738"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12083"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006137"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006138"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ93"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175385"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1021" sboTerm="SBO:0000243" fbc:id="G_SO1021" fbc:name="G_SO1021" fbc:label="G_SO1021">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1021">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041621"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007553"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFC3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946764"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12082"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000440"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDX2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175386"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1009" sboTerm="SBO:0000243" fbc:id="G_SO1009" fbc:name="G_SO1009" fbc:label="G_SO1009">
+      <fbc:geneProduct metaid="G_SO1011" sboTerm="SBO:0000243" fbc:id="G_SO1011" fbc:name="G_SO1011" fbc:label="G_SO1011">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145346,26 +145955,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1009">
+            <rdf:Description rdf:about="#G_SO1011">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042285"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007526"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFF0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945136"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007532"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33607"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12092"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001516"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001750"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010096"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ84"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003916"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ86"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175376"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1017" sboTerm="SBO:0000243" fbc:id="G_SO1017" fbc:name="G_SO1017" fbc:label="G_SO1017">
+      <fbc:geneProduct metaid="G_SO1013" sboTerm="SBO:0000243" fbc:id="G_SO1013" fbc:name="G_SO1013" fbc:label="G_SO1013">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145373,20 +145984,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1017">
+            <rdf:Description rdf:about="#G_SO1013">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045401"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007545"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P31979"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946753"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11774"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001949"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011537"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011538"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ91"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175382"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946756"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12090"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001457"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ88"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175378"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145421,35 +146028,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1019" sboTerm="SBO:0000243" fbc:id="G_SO1019" fbc:name="G_SO1019" fbc:label="G_SO1019">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1019">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042260"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007549"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33599"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12084"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001135"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001268"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010218"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010219"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ92"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175384"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1014" sboTerm="SBO:0000243" fbc:id="G_SO1014" fbc:name="G_SO1014" fbc:label="G_SO1014">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145478,38 +146056,14 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1013" sboTerm="SBO:0000243" fbc:id="G_SO1013" fbc:name="G_SO1013" fbc:label="G_SO1013">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1013">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFE0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946756"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12090"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001457"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CJ88"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175378"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1105" sboTerm="SBO:0000243" fbc:id="G_SO1105" fbc:name="G_SO1105" fbc:label="G_SO1105">
+      <fbc:geneProduct metaid="G_SO1103" sboTerm="SBO:0000243" fbc:id="G_SO1103" fbc:name="G_SO1103" fbc:label="G_SO1103">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1106" sboTerm="SBO:0000243" fbc:id="G_SO1106" fbc:name="G_SO1106" fbc:label="G_SO1106">
+      <fbc:geneProduct metaid="G_SO1108" sboTerm="SBO:0000243" fbc:id="G_SO1108" fbc:name="G_SO1108" fbc:label="G_SO1108">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145523,28 +146077,28 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1103" sboTerm="SBO:0000243" fbc:id="G_SO1103" fbc:name="G_SO1103" fbc:label="G_SO1103">
+      <fbc:geneProduct metaid="G_SO1107" sboTerm="SBO:0000243" fbc:id="G_SO1107" fbc:name="G_SO1107" fbc:label="G_SO1107">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1108" sboTerm="SBO:0000243" fbc:id="G_SO1108" fbc:name="G_SO1108" fbc:label="G_SO1108">
+      <fbc:geneProduct metaid="G_SO1106" sboTerm="SBO:0000243" fbc:id="G_SO1106" fbc:name="G_SO1106" fbc:label="G_SO1106">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1107" sboTerm="SBO:0000243" fbc:id="G_SO1107" fbc:name="G_SO1107" fbc:label="G_SO1107">
+      <fbc:geneProduct metaid="G_SO1105" sboTerm="SBO:0000243" fbc:id="G_SO1105" fbc:name="G_SO1105" fbc:label="G_SO1105">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0956" sboTerm="SBO:0000243" fbc:id="G_SO0956" fbc:name="G_SO0956" fbc:label="G_SO0956">
+      <fbc:geneProduct metaid="G_SO0958" sboTerm="SBO:0000243" fbc:id="G_SO0958" fbc:name="G_SO0958" fbc:label="G_SO0958">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145552,22 +146106,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0956">
+            <rdf:Description rdf:about="#G_SO0958">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002093"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P35340"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947540"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0958" sboTerm="SBO:0000243" fbc:id="G_SO0958" fbc:name="G_SO0958" fbc:label="G_SO0958">
+      <fbc:geneProduct metaid="G_SO0956" sboTerm="SBO:0000243" fbc:id="G_SO0956" fbc:name="G_SO0956" fbc:label="G_SO0956">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145575,11 +146125,15 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0958">
+            <rdf:Description rdf:about="#G_SO0956">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045608"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045609"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002093"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P35340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11385"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145688,6 +146242,34 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3740" sboTerm="SBO:0000243" fbc:id="G_SO3740" fbc:name="G_SO3740" fbc:label="G_SO3740">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3740">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005354"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07001"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946628"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10744"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007698"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007886"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008142"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008143"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CII9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175135"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3741" sboTerm="SBO:0000243" fbc:id="G_SO3741" fbc:name="G_SO3741" fbc:label="G_SO3741">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145713,7 +146295,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3740" sboTerm="SBO:0000243" fbc:id="G_SO3740" fbc:name="G_SO3740" fbc:label="G_SO3740">
+      <fbc:geneProduct metaid="G_SO0069" sboTerm="SBO:0000243" fbc:id="G_SO0069" fbc:name="G_SO0069" fbc:label="G_SO0069">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -145721,20 +146303,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3740">
+            <rdf:Description rdf:about="#G_SO0069">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005354"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P07001"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946628"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10744"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007698"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007886"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008142"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008143"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CII9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175135"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003675"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q186H0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q186H0"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -145769,26 +146343,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0069" sboTerm="SBO:0000243" fbc:id="G_SO0069" fbc:name="G_SO0069" fbc:label="G_SO0069">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0069">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003675"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q186H0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q186H0"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1007" sboTerm="SBO:0000243" fbc:id="G_SO1007" fbc:name="G_SO1007" fbc:label="G_SO1007">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -145999,27 +146553,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0847" sboTerm="SBO:0000243" fbc:id="G_SO0847" fbc:name="G_SO0847" fbc:label="G_SO0847">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0847">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007287"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAL3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12064"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0848" sboTerm="SBO:0000243" fbc:id="G_SO0848" fbc:name="G_SO0848" fbc:label="G_SO0848">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146050,6 +146583,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0847" sboTerm="SBO:0000243" fbc:id="G_SO0847" fbc:name="G_SO0847" fbc:label="G_SO0847">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0847">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007287"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAL3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12064"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0846" sboTerm="SBO:0000243" fbc:id="G_SO0846" fbc:name="G_SO0846" fbc:label="G_SO0846">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146096,35 +146650,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0372" sboTerm="SBO:0000243" fbc:id="G_SO0372" fbc:name="G_SO0372" fbc:label="G_SO0372">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0372">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948899"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12115"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000223"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005834"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006402"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011951"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIJ2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175127"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2484" sboTerm="SBO:0000243" fbc:id="G_SO2484" fbc:name="G_SO2484" fbc:label="G_SO2484">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146150,6 +146675,35 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0372" sboTerm="SBO:0000243" fbc:id="G_SO0372" fbc:name="G_SO0372" fbc:label="G_SO0372">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0372">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0014344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A8Y1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948899"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12115"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000223"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005834"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006402"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011951"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CIJ2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175127"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2001" sboTerm="SBO:0000243" fbc:id="G_SO2001" fbc:name="G_SO2001" fbc:label="G_SO2001">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146260,12 +146814,26 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0229" sboTerm="SBO:0000243" fbc:id="G_SO0229" fbc:name="G_SO0229" fbc:label="G_SO0229">
+      <fbc:geneProduct metaid="G_SO0106" sboTerm="SBO:0000243" fbc:id="G_SO0106" fbc:name="G_SO0106" fbc:label="G_SO0106">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0106">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011729"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14081"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10942"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1502" sboTerm="SBO:0000243" fbc:id="G_SO1502" fbc:name="G_SO1502" fbc:label="G_SO1502">
         <notes>
@@ -146306,26 +146874,12 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0106" sboTerm="SBO:0000243" fbc:id="G_SO0106" fbc:name="G_SO0106" fbc:label="G_SO0106">
+      <fbc:geneProduct metaid="G_SO0229" sboTerm="SBO:0000243" fbc:id="G_SO0229" fbc:name="G_SO0229" fbc:label="G_SO0229">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
           </html>
         </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0106">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0011729"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P14081"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10942"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
       </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2093" sboTerm="SBO:0000243" fbc:id="G_SO2093" fbc:name="G_SO2093" fbc:label="G_SO2093">
         <notes>
@@ -146348,6 +146902,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0842" sboTerm="SBO:0000243" fbc:id="G_SO0842" fbc:name="G_SO0842" fbc:label="G_SO0842">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0604" sboTerm="SBO:0000243" fbc:id="G_SO0604" fbc:name="G_SO0604" fbc:label="G_SO0604">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146369,13 +146930,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0842" sboTerm="SBO:0000243" fbc:id="G_SO0842" fbc:name="G_SO0842" fbc:label="G_SO0842">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4256" sboTerm="SBO:0000243" fbc:id="G_SO4256" fbc:name="G_SO4256" fbc:label="G_SO4256">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146540,7 +147094,7 @@
           </html>
         </notes>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4568" sboTerm="SBO:0000243" fbc:id="G_SO4568" fbc:name="G_SO4568" fbc:label="G_SO4568">
+      <fbc:geneProduct metaid="G_SO4061" sboTerm="SBO:0000243" fbc:id="G_SO4061" fbc:name="G_SO4061" fbc:label="G_SO4061">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146548,20 +147102,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4568">
+            <rdf:Description rdf:about="#G_SO4061">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013348"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948580"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11947"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013346"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAK7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948581"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11946"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3980" sboTerm="SBO:0000243" fbc:id="G_SO3980" fbc:name="G_SO3980" fbc:label="G_SO3980">
+      <fbc:geneProduct metaid="G_SO1782" sboTerm="SBO:0000243" fbc:id="G_SO1782" fbc:name="G_SO1782" fbc:label="G_SO1782">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146569,20 +147123,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3980">
+            <rdf:Description rdf:about="#G_SO1782">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013342"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK9"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948571"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11781"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013344"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948573"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11945"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1782" sboTerm="SBO:0000243" fbc:id="G_SO1782" fbc:name="G_SO1782" fbc:label="G_SO1782">
+      <fbc:geneProduct metaid="G_SO3980" sboTerm="SBO:0000243" fbc:id="G_SO3980" fbc:name="G_SO3980" fbc:label="G_SO3980">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146590,20 +147144,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1782">
+            <rdf:Description rdf:about="#G_SO3980">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013344"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABL1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948573"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11945"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABK9"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948571"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11781"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4061" sboTerm="SBO:0000243" fbc:id="G_SO4061" fbc:name="G_SO4061" fbc:label="G_SO4061">
+      <fbc:geneProduct metaid="G_SO4568" sboTerm="SBO:0000243" fbc:id="G_SO4568" fbc:name="G_SO4568" fbc:label="G_SO4568">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -146611,19 +147165,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4061">
+            <rdf:Description rdf:about="#G_SO4568">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013346"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AAK7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948581"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11946"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013348"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P32709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948580"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11947"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2408" sboTerm="SBO:0000243" fbc:id="G_SO2408" fbc:name="G_SO2408" fbc:label="G_SO2408">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2913" sboTerm="SBO:0000243" fbc:id="G_SO2913" fbc:name="G_SO2913" fbc:label="G_SO2913">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146680,13 +147241,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2408" sboTerm="SBO:0000243" fbc:id="G_SO2408" fbc:name="G_SO2408" fbc:label="G_SO2408">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0277" sboTerm="SBO:0000243" fbc:id="G_SO0277" fbc:name="G_SO0277" fbc:label="G_SO0277">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146900,25 +147454,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4136" sboTerm="SBO:0000243" fbc:id="G_SO4136" fbc:name="G_SO4136" fbc:label="G_SO4136">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4136">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044738"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044738"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0314" sboTerm="SBO:0000243" fbc:id="G_SO0314" fbc:name="G_SO0314" fbc:label="G_SO0314">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -146951,6 +147486,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4136" sboTerm="SBO:0000243" fbc:id="G_SO4136" fbc:name="G_SO4136" fbc:label="G_SO4136">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4136">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044738"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044738"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4255" sboTerm="SBO:0000243" fbc:id="G_SO4255" fbc:name="G_SO4255" fbc:label="G_SO4255">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147279,6 +147833,25 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0437" sboTerm="SBO:0000243" fbc:id="G_SO0437" fbc:name="G_SO0437" fbc:label="G_SO0437">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO0437">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1208" sboTerm="SBO:0000243" fbc:id="G_SO1208" fbc:name="G_SO1208" fbc:label="G_SO1208">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147298,7 +147871,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0437" sboTerm="SBO:0000243" fbc:id="G_SO0437" fbc:name="G_SO0437" fbc:label="G_SO0437">
+      <fbc:geneProduct metaid="G_SO0425" sboTerm="SBO:0000243" fbc:id="G_SO0425" fbc:name="G_SO0425" fbc:label="G_SO0425">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147306,11 +147879,21 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0437">
+            <rdf:Description rdf:about="#G_SO0425">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043374"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06959"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10025"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001078"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003016"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006256"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKE5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176235"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147345,7 +147928,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0425" sboTerm="SBO:0000243" fbc:id="G_SO0425" fbc:name="G_SO0425" fbc:label="G_SO0425">
+      <fbc:geneProduct metaid="G_SO2895" sboTerm="SBO:0000243" fbc:id="G_SO2895" fbc:name="G_SO2895" fbc:label="G_SO2895">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147353,28 +147936,26 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0425">
+            <rdf:Description rdf:about="#G_SO2895">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000400"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P06959"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10025"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000089"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001078"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003016"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006256"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKE5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176235"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005482"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI7"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946806"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11487"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000659"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009002"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011576"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012349"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WEF2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175202"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2895" sboTerm="SBO:0000243" fbc:id="G_SO2895" fbc:name="G_SO2895" fbc:label="G_SO2895">
+      <fbc:geneProduct metaid="G_SO3638" sboTerm="SBO:0000243" fbc:id="G_SO3638" fbc:name="G_SO3638" fbc:label="G_SO3638">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147382,19 +147963,16 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2895">
+            <rdf:Description rdf:about="#G_SO3638">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0005482"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AFI7"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946806"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11487"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000659"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009002"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011576"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012349"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WEF2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175202"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000178"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19624"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944919"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10691"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJH2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173338"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147425,30 +148003,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3638" sboTerm="SBO:0000243" fbc:id="G_SO3638" fbc:name="G_SO3638" fbc:label="G_SO3638">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3638">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000178"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P19624"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/944919"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10691"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJH2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173338"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3309" sboTerm="SBO:0000243" fbc:id="G_SO3309" fbc:name="G_SO3309" fbc:label="G_SO3309">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -147842,7 +148396,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0259" sboTerm="SBO:0000243" fbc:id="G_SO0259" fbc:name="G_SO0259" fbc:label="G_SO0259">
+      <fbc:geneProduct metaid="G_SO0262" sboTerm="SBO:0000243" fbc:id="G_SO0262" fbc:name="G_SO0262" fbc:label="G_SO0262">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147850,13 +148404,12 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0259">
+            <rdf:Description rdf:about="#G_SO0262">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007271"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69490"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946697"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12055"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003544"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDF6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175566"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147889,7 +148442,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0262" sboTerm="SBO:0000243" fbc:id="G_SO0262" fbc:name="G_SO0262" fbc:label="G_SO0262">
+      <fbc:geneProduct metaid="G_SO0260" sboTerm="SBO:0000243" fbc:id="G_SO0260" fbc:name="G_SO0260" fbc:label="G_SO0260">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147897,19 +148450,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0262">
+            <rdf:Description rdf:about="#G_SO0260">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003544"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WDF6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175566"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007273"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABM5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946709"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12169"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0260" sboTerm="SBO:0000243" fbc:id="G_SO0260" fbc:name="G_SO0260" fbc:label="G_SO0260">
+      <fbc:geneProduct metaid="G_SO0259" sboTerm="SBO:0000243" fbc:id="G_SO0259" fbc:name="G_SO0259" fbc:label="G_SO0259">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147917,13 +148471,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0260">
+            <rdf:Description rdf:about="#G_SO0259">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007273"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ABM5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946709"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12169"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007271"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69490"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946697"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12055"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -147949,7 +148503,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1667" sboTerm="SBO:0000243" fbc:id="G_SO1667" fbc:name="G_SO1667" fbc:label="G_SO1667">
+      <fbc:geneProduct metaid="G_SO1666" sboTerm="SBO:0000243" fbc:id="G_SO1666" fbc:name="G_SO1666" fbc:label="G_SO1666">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147957,18 +148511,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1667">
+            <rdf:Description rdf:about="#G_SO1666">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043386"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043385"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1666" sboTerm="SBO:0000243" fbc:id="G_SO1666" fbc:name="G_SO1666" fbc:label="G_SO1666">
+      <fbc:geneProduct metaid="G_SO1667" sboTerm="SBO:0000243" fbc:id="G_SO1667" fbc:name="G_SO1667" fbc:label="G_SO1667">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -147976,11 +148530,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1666">
+            <rdf:Description rdf:about="#G_SO1667">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043385"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043385"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043386"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043386"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148006,7 +148560,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1725" sboTerm="SBO:0000243" fbc:id="G_SO1725" fbc:name="G_SO1725" fbc:label="G_SO1725">
+      <fbc:geneProduct metaid="G_SO4290" sboTerm="SBO:0000243" fbc:id="G_SO4290" fbc:name="G_SO4290" fbc:label="G_SO4290">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148014,18 +148568,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1725">
+            <rdf:Description rdf:about="#G_SO4290">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042041"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005672"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180A6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180A6"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4292" sboTerm="SBO:0000243" fbc:id="G_SO4292" fbc:name="G_SO4292" fbc:label="G_SO4292">
+      <fbc:geneProduct metaid="G_SO4289" sboTerm="SBO:0000243" fbc:id="G_SO4289" fbc:name="G_SO4289" fbc:label="G_SO4289">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148033,20 +148589,31 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4292">
+            <rdf:Description rdf:about="#G_SO4289">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011862"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180A5"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015850"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11379"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/P46342"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4290" sboTerm="SBO:0000243" fbc:id="G_SO4290" fbc:name="G_SO4290" fbc:label="G_SO4290">
+      <fbc:geneProduct metaid="G_SO1725" sboTerm="SBO:0000243" fbc:id="G_SO1725" fbc:name="G_SO1725" fbc:label="G_SO1725">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148054,13 +148621,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4290">
+            <rdf:Description rdf:about="#G_SO1725">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000515"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005672"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180A6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180A6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042041"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042041"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148088,7 +148653,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4289" sboTerm="SBO:0000243" fbc:id="G_SO4289" fbc:name="G_SO4289" fbc:label="G_SO4289">
+      <fbc:geneProduct metaid="G_SO4292" sboTerm="SBO:0000243" fbc:id="G_SO4292" fbc:name="G_SO4292" fbc:label="G_SO4292">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148096,24 +148661,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4289">
+            <rdf:Description rdf:about="#G_SO4292">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180A5"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003439"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR003593"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005670"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR015850"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR017871"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR027417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/subtilist/BG11379"/>
-                  <rdf:li rdf:resource="http://identifiers.org/goa/P46342"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR011862"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR024370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q180B2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/goa/Q180B2"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148164,7 +148718,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1724" sboTerm="SBO:0000243" fbc:id="G_SO1724" fbc:name="G_SO1724" fbc:label="G_SO1724">
+      <fbc:geneProduct metaid="G_SO1723" sboTerm="SBO:0000243" fbc:id="G_SO1723" fbc:name="G_SO1723" fbc:label="G_SO1723">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148172,18 +148726,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1724">
+            <rdf:Description rdf:about="#G_SO1723">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1723" sboTerm="SBO:0000243" fbc:id="G_SO1723" fbc:name="G_SO1723" fbc:label="G_SO1723">
+      <fbc:geneProduct metaid="G_SO1724" sboTerm="SBO:0000243" fbc:id="G_SO1724" fbc:name="G_SO1724" fbc:label="G_SO1724">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148191,11 +148745,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1723">
+            <rdf:Description rdf:about="#G_SO1724">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042167"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042175"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148403,7 +148957,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0027" sboTerm="SBO:0000243" fbc:id="G_SO0027" fbc:name="G_SO0027" fbc:label="G_SO0027">
+      <fbc:geneProduct metaid="G_SO4316" sboTerm="SBO:0000243" fbc:id="G_SO4316" fbc:name="G_SO4316" fbc:label="G_SO4316">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148411,17 +148965,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0027">
+            <rdf:Description rdf:about="#G_SO4316">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012577"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACB4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948331"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11485"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008254"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKU3"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176596"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043715"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148446,7 +148994,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4316" sboTerm="SBO:0000243" fbc:id="G_SO4316" fbc:name="G_SO4316" fbc:label="G_SO4316">
+      <fbc:geneProduct metaid="G_SO0027" sboTerm="SBO:0000243" fbc:id="G_SO0027" fbc:name="G_SO0027" fbc:label="G_SO0027">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -148454,11 +149002,17 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4316">
+            <rdf:Description rdf:about="#G_SO0027">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043715"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043715"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0012577"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0ACB4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11485"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008254"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKU3"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176596"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -148658,6 +149212,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1980" sboTerm="SBO:0000243" fbc:id="G_SO1980" fbc:name="G_SO1980" fbc:label="G_SO1980">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO3837" sboTerm="SBO:0000243" fbc:id="G_SO3837" fbc:name="G_SO3837" fbc:label="G_SO3837">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148685,13 +149246,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1980" sboTerm="SBO:0000243" fbc:id="G_SO1980" fbc:name="G_SO1980" fbc:label="G_SO1980">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2404" sboTerm="SBO:0000243" fbc:id="G_SO2404" fbc:name="G_SO2404" fbc:label="G_SO2404">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148915,27 +149469,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1270" sboTerm="SBO:0000243" fbc:id="G_SO1270" fbc:name="G_SO1270" fbc:label="G_SO1270">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1270">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1272" sboTerm="SBO:0000243" fbc:id="G_SO1272" fbc:name="G_SO1272" fbc:label="G_SO1272">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -148989,6 +149522,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1270" sboTerm="SBO:0000243" fbc:id="G_SO1270" fbc:name="G_SO1270" fbc:label="G_SO1270">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1270">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046794"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042497"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4081" sboTerm="SBO:0000243" fbc:id="G_SO4081" fbc:name="G_SO4081" fbc:label="G_SO4081">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149294,6 +149848,27 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2415" sboTerm="SBO:0000243" fbc:id="G_SO2415" fbc:name="G_SO2415" fbc:label="G_SO2415">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2415">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007383"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946612"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10660"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2416" sboTerm="SBO:0000243" fbc:id="G_SO2416" fbc:name="G_SO2416" fbc:label="G_SO2416">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149315,7 +149890,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2415" sboTerm="SBO:0000243" fbc:id="G_SO2415" fbc:name="G_SO2415" fbc:label="G_SO2415">
+      <fbc:geneProduct metaid="G_SO2834" sboTerm="SBO:0000243" fbc:id="G_SO2834" fbc:name="G_SO2834" fbc:label="G_SO2834">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149323,13 +149898,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2415">
+            <rdf:Description rdf:about="#G_SO2834">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007383"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P00452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946612"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10660"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013865"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28903"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948755"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11417"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001150"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005144"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012833"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKG1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176271"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149357,32 +149937,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2834" sboTerm="SBO:0000243" fbc:id="G_SO2834" fbc:name="G_SO2834" fbc:label="G_SO2834">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2834">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013865"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P28903"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948755"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11417"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001150"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005144"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012833"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKG1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176271"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0292" sboTerm="SBO:0000243" fbc:id="G_SO0292" fbc:name="G_SO0292" fbc:label="G_SO0292">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -149616,7 +150170,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SOA0160" sboTerm="SBO:0000243" fbc:id="G_SOA0160" fbc:name="G_SOA0160" fbc:label="G_SOA0160">
+      <fbc:geneProduct metaid="G_SO2055" sboTerm="SBO:0000243" fbc:id="G_SO2055" fbc:name="G_SO2055" fbc:label="G_SO2055">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149624,18 +150178,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SOA0160">
+            <rdf:Description rdf:about="#G_SO2055">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044878"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000801"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHQ0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174340"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2055" sboTerm="SBO:0000243" fbc:id="G_SO2055" fbc:name="G_SO2055" fbc:label="G_SO2055">
+      <fbc:geneProduct metaid="G_SOA0160" sboTerm="SBO:0000243" fbc:id="G_SOA0160" fbc:name="G_SOA0160" fbc:label="G_SOA0160">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149643,12 +150198,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2055">
+            <rdf:Description rdf:about="#G_SOA0160">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000801"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHQ0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174340"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044878"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044878"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149697,7 +150251,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2473" sboTerm="SBO:0000243" fbc:id="G_SO2473" fbc:name="G_SO2473" fbc:label="G_SO2473">
+      <fbc:geneProduct metaid="G_SO4574" sboTerm="SBO:0000243" fbc:id="G_SO4574" fbc:name="G_SO4574" fbc:label="G_SO4574">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149705,18 +150259,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2473">
+            <rdf:Description rdf:about="#G_SO4574">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042540"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007478"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37355"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946736"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12438"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4574" sboTerm="SBO:0000243" fbc:id="G_SO4574" fbc:name="G_SO4574" fbc:label="G_SO4574">
+      <fbc:geneProduct metaid="G_SO2473" sboTerm="SBO:0000243" fbc:id="G_SO2473" fbc:name="G_SO2473" fbc:label="G_SO2473">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -149724,13 +150280,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4574">
+            <rdf:Description rdf:about="#G_SO2473">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0007478"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37355"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946736"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12438"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042540"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042540"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -149978,25 +150532,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3145" sboTerm="SBO:0000243" fbc:id="G_SO3145" fbc:name="G_SO3145" fbc:label="G_SO3145">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3145">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4453" sboTerm="SBO:0000243" fbc:id="G_SO4453" fbc:name="G_SO4453" fbc:label="G_SO4453">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150016,30 +150551,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4778" sboTerm="SBO:0000243" fbc:id="G_SO4778" fbc:name="G_SO4778" fbc:label="G_SO4778">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4778">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002464"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC44"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945322"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10934"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH43"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173958"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1927" sboTerm="SBO:0000243" fbc:id="G_SO1927" fbc:name="G_SO1927" fbc:label="G_SO1927">
+      <fbc:geneProduct metaid="G_SO3145" sboTerm="SBO:0000243" fbc:id="G_SO3145" fbc:name="G_SO3145" fbc:label="G_SO3145">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150047,16 +150559,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1927">
+            <rdf:Description rdf:about="#G_SO3145">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002460"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69054"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945316"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10933"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000701"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH42"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173957"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1042448"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150121,6 +150628,53 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO4778" sboTerm="SBO:0000243" fbc:id="G_SO4778" fbc:name="G_SO4778" fbc:label="G_SO4778">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO4778">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002464"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AC44"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945322"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10934"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH43"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173958"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO1927" sboTerm="SBO:0000243" fbc:id="G_SO1927" fbc:name="G_SO1927" fbc:label="G_SO1927">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO1927">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0002460"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P69054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/945316"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10933"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000701"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CH42"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173957"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1932" sboTerm="SBO:0000243" fbc:id="G_SO1932" fbc:name="G_SO1932" fbc:label="G_SO1932">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150281,13 +150835,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2756" sboTerm="SBO:0000243" fbc:id="G_SO2756" fbc:name="G_SO2756" fbc:label="G_SO2756">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1877" sboTerm="SBO:0000243" fbc:id="G_SO1877" fbc:name="G_SO1877" fbc:label="G_SO1877">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150314,6 +150861,13 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2756" sboTerm="SBO:0000243" fbc:id="G_SO2756" fbc:name="G_SO2756" fbc:label="G_SO2756">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4673" sboTerm="SBO:0000243" fbc:id="G_SO4673" fbc:name="G_SO4673" fbc:label="G_SO4673">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150412,6 +150966,45 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3895" sboTerm="SBO:0000243" fbc:id="G_SO3895" fbc:name="G_SO3895" fbc:label="G_SO3895">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2442" sboTerm="SBO:0000243" fbc:id="G_SO2442" fbc:name="G_SO2442" fbc:label="G_SO2442">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3464" sboTerm="SBO:0000243" fbc:id="G_SO3464" fbc:name="G_SO3464" fbc:label="G_SO3464">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3464">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001452"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGG0"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947387"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20227"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006283"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010918"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK42"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175995"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO2441" sboTerm="SBO:0000243" fbc:id="G_SO2441" fbc:name="G_SO2441" fbc:label="G_SO2441">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150462,6 +151055,32 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO2443" sboTerm="SBO:0000243" fbc:id="G_SO2443" fbc:name="G_SO2443" fbc:label="G_SO2443">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO2443">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013053"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30138"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948500"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000594"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007901"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009036"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKT8"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176567"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1531" sboTerm="SBO:0000243" fbc:id="G_SO1531" fbc:name="G_SO1531" fbc:label="G_SO1531">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150489,71 +151108,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3895" sboTerm="SBO:0000243" fbc:id="G_SO3895" fbc:name="G_SO3895" fbc:label="G_SO3895">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3464" sboTerm="SBO:0000243" fbc:id="G_SO3464" fbc:name="G_SO3464" fbc:label="G_SO3464">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3464">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0001452"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0AGG0"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/947387"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG20227"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR006283"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR010918"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CK42"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1175995"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2442" sboTerm="SBO:0000243" fbc:id="G_SO2442" fbc:name="G_SO2442" fbc:label="G_SO2442">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2443" sboTerm="SBO:0000243" fbc:id="G_SO2443" fbc:name="G_SO2443" fbc:label="G_SO2443">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2443">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013053"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P30138"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948500"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11587"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000594"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR007901"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR009036"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKT8"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176567"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO0930" sboTerm="SBO:0000243" fbc:id="G_SO0930" fbc:name="G_SO0930" fbc:label="G_SO0930">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -150584,7 +151138,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1232" sboTerm="SBO:0000243" fbc:id="G_SO1232" fbc:name="G_SO1232" fbc:label="G_SO1232">
+      <fbc:geneProduct metaid="G_SO1233" sboTerm="SBO:0000243" fbc:id="G_SO1233" fbc:name="G_SO1233" fbc:label="G_SO1233">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150592,20 +151146,20 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1232">
+            <rdf:Description rdf:about="#G_SO1233">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003372"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33225"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946267"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11814"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003370"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33226"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946252"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11815"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1233" sboTerm="SBO:0000243" fbc:id="G_SO1233" fbc:name="G_SO1233" fbc:label="G_SO1233">
+      <fbc:geneProduct metaid="G_SO1232" sboTerm="SBO:0000243" fbc:id="G_SO1232" fbc:name="G_SO1232" fbc:label="G_SO1232">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150613,13 +151167,13 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1233">
+            <rdf:Description rdf:about="#G_SO1232">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003370"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33226"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946252"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11815"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003372"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P33225"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946267"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11814"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150650,7 +151204,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2453" sboTerm="SBO:0000243" fbc:id="G_SO2453" fbc:name="G_SO2453" fbc:label="G_SO2453">
+      <fbc:geneProduct metaid="G_SO2454" sboTerm="SBO:0000243" fbc:id="G_SO2454" fbc:name="G_SO2454" fbc:label="G_SO2454">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150658,18 +151212,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2453">
+            <rdf:Description rdf:about="#G_SO2454">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046823"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045655"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2454" sboTerm="SBO:0000243" fbc:id="G_SO2454" fbc:name="G_SO2454" fbc:label="G_SO2454">
+      <fbc:geneProduct metaid="G_SO2453" sboTerm="SBO:0000243" fbc:id="G_SO2453" fbc:name="G_SO2453" fbc:label="G_SO2453">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150677,11 +151231,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2454">
+            <rdf:Description rdf:about="#G_SO2453">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045655"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045655"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046823"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1046823"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -150752,7 +151306,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2100" sboTerm="SBO:0000243" fbc:id="G_SO2100" fbc:name="G_SO2100" fbc:label="G_SO2100">
+      <fbc:geneProduct metaid="G_SO2303" sboTerm="SBO:0000243" fbc:id="G_SO2303" fbc:name="G_SO2303" fbc:label="G_SO2303">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150760,17 +151314,28 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2100">
+            <rdf:Description rdf:about="#G_SO2303">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899362"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003018"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9P4"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949054"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11032"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000759"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005982"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008255"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHI6"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174215"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2303" sboTerm="SBO:0000243" fbc:id="G_SO2303" fbc:name="G_SO2303" fbc:label="G_SO2303">
+      <fbc:geneProduct metaid="G_SO2100" sboTerm="SBO:0000243" fbc:id="G_SO2100" fbc:name="G_SO2100" fbc:label="G_SO2100">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -150778,21 +151343,10 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO2303">
+            <rdf:Description rdf:about="#G_SO2100">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0003018"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P0A9P4"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/949054"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG11032"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000103"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000759"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR001327"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005982"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR008255"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013027"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CHI6"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1174215"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/899362"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151066,7 +151620,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3805" sboTerm="SBO:0000243" fbc:id="G_SO3805" fbc:name="G_SO3805" fbc:label="G_SO3805">
+      <fbc:geneProduct metaid="G_SO4218" sboTerm="SBO:0000243" fbc:id="G_SO4218" fbc:name="G_SO4218" fbc:label="G_SO4218">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151074,29 +151628,29 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3805">
+            <rdf:Description rdf:about="#G_SO4218">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013847"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37773"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948752"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12440"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000324"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17952"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946153"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10619"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000713"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005757"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005758"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012237"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013221"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKK2"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176338"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJB1"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173400"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4218" sboTerm="SBO:0000243" fbc:id="G_SO4218" fbc:name="G_SO4218" fbc:label="G_SO4218">
+      <fbc:geneProduct metaid="G_SO3805" sboTerm="SBO:0000243" fbc:id="G_SO3805" fbc:name="G_SO3805" fbc:label="G_SO3805">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151104,22 +151658,22 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4218">
+            <rdf:Description rdf:about="#G_SO3805">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1041656"/>
-                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0000324"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P17952"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/946153"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG10619"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1044331"/>
+                  <rdf:li rdf:resource="http://identifiers.org/asap/ABE-0013847"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/P37773"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/948752"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ecogene/EG12440"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR000713"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR004101"/>
-                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005758"/>
+                  <rdf:li rdf:resource="http://identifiers.org/interpro/IPR005757"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR012237"/>
                   <rdf:li rdf:resource="http://identifiers.org/interpro/IPR013221"/>
-                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q0WJB1"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1173400"/>
+                  <rdf:li rdf:resource="http://identifiers.org/uniprot/Q7CKK2"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1176338"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
@@ -151166,6 +151720,32 @@
           </html>
         </notes>
       </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3173" sboTerm="SBO:0000243" fbc:id="G_SO3173" fbc:name="G_SO3173" fbc:label="G_SO3173">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
+          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
+            <rdf:Description rdf:about="#G_SO3173">
+              <bqbiol:is>
+                <rdf:Bag>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043299"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043299"/>
+                </rdf:Bag>
+              </bqbiol:is>
+            </rdf:Description>
+          </rdf:RDF>
+        </annotation>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO3271" sboTerm="SBO:0000243" fbc:id="G_SO3271" fbc:name="G_SO3271" fbc:label="G_SO3271">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO1664" sboTerm="SBO:0000243" fbc:id="G_SO1664" fbc:name="G_SO1664" fbc:label="G_SO1664">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151201,32 +151781,6 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3173" sboTerm="SBO:0000243" fbc:id="G_SO3173" fbc:name="G_SO3173" fbc:label="G_SO3173">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-        <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
-          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO3173">
-              <bqbiol:is>
-                <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043299"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1043299"/>
-                </rdf:Bag>
-              </bqbiol:is>
-            </rdf:Description>
-          </rdf:RDF>
-        </annotation>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO3271" sboTerm="SBO:0000243" fbc:id="G_SO3271" fbc:name="G_SO3271" fbc:label="G_SO3271">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
       <fbc:geneProduct metaid="G_SO4223" sboTerm="SBO:0000243" fbc:id="G_SO4223" fbc:name="G_SO4223" fbc:label="G_SO4223">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
@@ -151514,7 +152068,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1206" sboTerm="SBO:0000243" fbc:id="G_SO1206" fbc:name="G_SO1206" fbc:label="G_SO1206">
+      <fbc:geneProduct metaid="G_SO4426" sboTerm="SBO:0000243" fbc:id="G_SO4426" fbc:name="G_SO4426" fbc:label="G_SO4426">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151522,17 +152076,19 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO1206">
+            <rdf:Description rdf:about="#G_SO4426">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888587"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887958"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/854088"/>
+                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000005427"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO1620" sboTerm="SBO:0000243" fbc:id="G_SO1620" fbc:name="G_SO1620" fbc:label="G_SO1620">
+      <fbc:geneProduct metaid="G_SO2937" sboTerm="SBO:0000243" fbc:id="G_SO2937" fbc:name="G_SO2937" fbc:label="G_SO2937">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151563,14 +152119,7 @@
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO2937" sboTerm="SBO:0000243" fbc:id="G_SO2937" fbc:name="G_SO2937" fbc:label="G_SO2937">
-        <notes>
-          <html xmlns="http://www.w3.org/1999/xhtml">
-            <p>SBOTerm: SBO:0000243</p>
-          </html>
-        </notes>
-      </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO4426" sboTerm="SBO:0000243" fbc:id="G_SO4426" fbc:name="G_SO4426" fbc:label="G_SO4426">
+      <fbc:geneProduct metaid="G_SO1206" sboTerm="SBO:0000243" fbc:id="G_SO1206" fbc:name="G_SO1206" fbc:label="G_SO1206">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151578,19 +152127,24 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO4426">
+            <rdf:Description rdf:about="#G_SO1206">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/887958"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/854088"/>
-                  <rdf:li rdf:resource="http://identifiers.org/sgd/S000005427"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/888587"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0518" sboTerm="SBO:0000243" fbc:id="G_SO0518" fbc:name="G_SO0518" fbc:label="G_SO0518">
+      <fbc:geneProduct metaid="G_SO1620" sboTerm="SBO:0000243" fbc:id="G_SO1620" fbc:name="G_SO1620" fbc:label="G_SO1620">
+        <notes>
+          <html xmlns="http://www.w3.org/1999/xhtml">
+            <p>SBOTerm: SBO:0000243</p>
+          </html>
+        </notes>
+      </fbc:geneProduct>
+      <fbc:geneProduct metaid="G_SO0519" sboTerm="SBO:0000243" fbc:id="G_SO0519" fbc:name="G_SO0519" fbc:label="G_SO0519">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151598,18 +152152,18 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0518">
+            <rdf:Description rdf:about="#G_SO0519">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045535"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045536"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
           </rdf:RDF>
         </annotation>
       </fbc:geneProduct>
-      <fbc:geneProduct metaid="G_SO0519" sboTerm="SBO:0000243" fbc:id="G_SO0519" fbc:name="G_SO0519" fbc:label="G_SO0519">
+      <fbc:geneProduct metaid="G_SO0518" sboTerm="SBO:0000243" fbc:id="G_SO0518" fbc:name="G_SO0518" fbc:label="G_SO0518">
         <notes>
           <html xmlns="http://www.w3.org/1999/xhtml">
             <p>SBOTerm: SBO:0000243</p>
@@ -151617,11 +152171,11 @@
         </notes>
         <annotation xmlns:sbml="http://www.sbml.org/sbml/level3/version1/core">
           <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
-            <rdf:Description rdf:about="#G_SO0519">
+            <rdf:Description rdf:about="#G_SO0518">
               <bqbiol:is>
                 <rdf:Bag>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045536"/>
-                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045536"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045535"/>
+                  <rdf:li rdf:resource="http://identifiers.org/ncbigene/1045535"/>
                 </rdf:Bag>
               </bqbiol:is>
             </rdf:Description>
diff --git a/carveme/data/benchmark/results/biolog.tsv b/carveme/data/benchmark/results/biolog.tsv
index ff029e3..6815096 100644
--- a/carveme/data/benchmark/results/biolog.tsv
+++ b/carveme/data/benchmark/results/biolog.tsv
@@ -3,15 +3,15 @@ bsub	C	4abut	TN
 bsub	C	abt__L	FN
 bsub	C	ac	FN
 bsub	C	acac	FN
-bsub	C	acgam	TP
-bsub	C	acmana	TP
+bsub	C	acgam	FN
+bsub	C	acmana	FN
 bsub	C	acnam	TP
 bsub	C	adn	FN
 bsub	C	akg	FN
 bsub	C	ala__D	FN
 bsub	C	ala__L	FN
 bsub	C	arab__D	FN
-bsub	C	arab__L	FN
+bsub	C	arab__L	TP
 bsub	C	arbt	TP
 bsub	C	asn__L	FN
 bsub	C	asp__L	FN
@@ -31,23 +31,23 @@ bsub	C	g1p	FN
 bsub	C	g6p	FN
 bsub	C	gal	FN
 bsub	C	galctr__D	FN
-bsub	C	galt	FN
-bsub	C	galur	FN
+bsub	C	galt	TP
+bsub	C	galur	TP
 bsub	C	gam	TP
 bsub	C	glc__D	TP
-bsub	C	glcn__D	FN
+bsub	C	glcn__D	TP
 bsub	C	glcr	FN
-bsub	C	glcur	FN
+bsub	C	glcur	TP
 bsub	C	gln__L	FN
 bsub	C	glu__L	FN
 bsub	C	glx	FN
 bsub	C	gly	TN
-bsub	C	glyc	FN
+bsub	C	glyc	TP
 bsub	C	glyc3p	FN
 bsub	C	glyclt	FN
 bsub	C	glycogen	FN
 bsub	C	ile__L	TN
-bsub	C	ins	FN
+bsub	C	ins	TP
 bsub	C	lac__L	FN
 bsub	C	leu__L	TN
 bsub	C	lys__L	TN
@@ -59,7 +59,7 @@ bsub	C	man	TP
 bsub	C	mbdg	TP
 bsub	C	melib	FN
 bsub	C	met__L	TN
-bsub	C	mnl	FN
+bsub	C	mnl	TP
 bsub	C	orn__L	FN
 bsub	C	pala	FN
 bsub	C	phe__L	TN
@@ -70,7 +70,7 @@ bsub	C	raffin	FN
 bsub	C	rib__D	FN
 bsub	C	rmn	FN
 bsub	C	salcn	TP
-bsub	C	sbt__D	FN
+bsub	C	sbt__D	TP
 bsub	C	ser__D	FN
 bsub	C	ser__L	FN
 bsub	C	srb__L	FN
@@ -81,8 +81,8 @@ bsub	C	thymd	TP
 bsub	C	tre	TP
 bsub	C	uri	TP
 bsub	C	val__L	TN
-bsub	C	xyl__D	FN
-bsub	N	4abut	TP
+bsub	C	xyl__D	TP
+bsub	N	4abut	FN
 bsub	N	acgam	TP
 bsub	N	ade	TN
 bsub	N	ala__D	TP
@@ -91,21 +91,21 @@ bsub	N	arg__L	TP
 bsub	N	asn__L	TP
 bsub	N	asp__L	TP
 bsub	N	citr__L	FN
-bsub	N	cys__L	FN
+bsub	N	cys__L	TP
 bsub	N	cytd	TP
 bsub	N	etha	TP
 bsub	N	gam	TP
 bsub	N	gln__L	TP
 bsub	N	glu__D	FN
-bsub	N	glu__L	TP
+bsub	N	glu__L	FN
 bsub	N	gly	TP
 bsub	N	ins	FP
 bsub	N	met__L	FN
 bsub	N	nh4	TP
 bsub	N	orn__L	TP
-bsub	N	pro__L	TP
+bsub	N	pro__L	FN
 bsub	N	ser__L	TP
-bsub	N	thr__L	TP
+bsub	N	thr__L	FN
 bsub	N	thym	TN
 bsub	N	ura	TN
 bsub	N	urate	TP
@@ -140,25 +140,25 @@ bsub	P	tmp	FN
 bsub	P	ump	FN
 bsub	S	djenk	FN
 bsub	S	gthox	TN
-bsub	S	met__D	TN
-bsub	S	metox	TN
-bsub	S	mso3	TN
+bsub	S	met__D	FP
+bsub	S	metox	FP
+bsub	S	mso3	FP
 bsub	S	so4	FP
-ecol	C	12ppd__S	FP
+ecol	C	12ppd__S	TN
 ecol	C	2obut	FN
 ecol	C	4abut	FP
 ecol	C	4hbz	TN
-ecol	C	4hphac	TN
+ecol	C	4hphac	FP
 ecol	C	5dglcn	TP
 ecol	C	abt	TN
-ecol	C	ac	FN
-ecol	C	acac	TN
+ecol	C	ac	TP
+ecol	C	acac	FP
 ecol	C	acgam	TP
 ecol	C	acglu	TN
 ecol	C	acmana	TP
 ecol	C	acnam	TP
 ecol	C	actn__R	FP
-ecol	C	ad	TN
+ecol	C	ad	FP
 ecol	C	adn	TP
 ecol	C	akg	TP
 ecol	C	ala__D	TP
@@ -168,25 +168,25 @@ ecol	C	arab__D	TN
 ecol	C	arab__L	TP
 ecol	C	arbt	FP
 ecol	C	arg__L	FP
-ecol	C	asn__L	TN
+ecol	C	asn__L	FP
 ecol	C	asp__D	TN
-ecol	C	asp__L	FN
+ecol	C	asp__L	TP
 ecol	C	but	FP
 ecol	C	cellb	FP
-ecol	C	cit	TN
+ecol	C	cit	FP
 ecol	C	citm	TN
 ecol	C	cs_c	TN
 ecol	C	dad_2	TP
 ecol	C	dca	FP
-ecol	C	dha	FP
-ecol	C	drib	TN
+ecol	C	dha	TN
+ecol	C	drib	FP
 ecol	C	dxtrn	FN
 ecol	C	etha	FP
 ecol	C	f6p	TP
 ecol	C	for	FN
 ecol	C	fru	TP
 ecol	C	fuc__L	TP
-ecol	C	fum	FN
+ecol	C	fum	TP
 ecol	C	g1p	TP
 ecol	C	g6p	TP
 ecol	C	gal	TP
@@ -202,10 +202,10 @@ ecol	C	glcur	TP
 ecol	C	gln__L	TP
 ecol	C	glu__L	FP
 ecol	C	glx	FN
-ecol	C	gly	FN
+ecol	C	gly	TP
 ecol	C	glyc	FP
 ecol	C	glyc3p	FP
-ecol	C	glyclt	FN
+ecol	C	glyclt	TP
 ecol	C	glycogen	FN
 ecol	C	his__L	TN
 ecol	C	hom__L	TN
@@ -217,10 +217,10 @@ ecol	C	itacon	TN
 ecol	C	lac__L	TP
 ecol	C	lcts	TP
 ecol	C	leu__L	TN
-ecol	C	lys__L	TN
+ecol	C	lys__L	FP
 ecol	C	lyx__L	TP
-ecol	C	mal__D	FN
-ecol	C	mal__L	FN
+ecol	C	mal__D	TP
+ecol	C	mal__L	TP
 ecol	C	malon	TN
 ecol	C	malt	TP
 ecol	C	malttr	TP
@@ -234,7 +234,7 @@ ecol	C	orn	FP
 ecol	C	oxa	TN
 ecol	C	peamn	FP
 ecol	C	pectin	FN
-ecol	C	phe__L	TN
+ecol	C	phe__L	FP
 ecol	C	ppa	FP
 ecol	C	pro__L	FP
 ecol	C	ptrc	FP
@@ -251,11 +251,11 @@ ecol	C	ser__D	TP
 ecol	C	ser__L	TP
 ecol	C	srb__L	TN
 ecol	C	stys	TN
-ecol	C	succ	FN
+ecol	C	succ	TP
 ecol	C	sucr	FP
 ecol	C	tag__D	FP
-ecol	C	tartr__D	TN
-ecol	C	tartr__L	TN
+ecol	C	tartr__D	FP
+ecol	C	tartr__L	FP
 ecol	C	tartr__M	TN
 ecol	C	tcb	TN
 ecol	C	thr__L	FP
@@ -269,7 +269,7 @@ ecol	C	xylt	TN
 ecol	N	acgal	TN
 ecol	N	acgam	TP
 ecol	N	acmana	TP
-ecol	N	ad	TN
+ecol	N	ad	FP
 ecol	N	ade	TP
 ecol	N	adn	FP
 ecol	N	agm	TP
@@ -294,7 +294,7 @@ ecol	N	gly	TP
 ecol	N	gsn	TP
 ecol	N	gua	FP
 ecol	N	ham	TN
-ecol	N	his__L	FN
+ecol	N	his__L	TP
 ecol	N	hista	TN
 ecol	N	hom__L	TN
 ecol	N	ile__L	FN
@@ -309,7 +309,7 @@ ecol	N	no2	TP
 ecol	N	no3	FP
 ecol	N	orn	TP
 ecol	N	peamn	FP
-ecol	N	phe__L	FN
+ecol	N	phe__L	TP
 ecol	N	pro__L	TP
 ecol	N	ptrc	TP
 ecol	N	ser__D	TP
@@ -319,7 +319,7 @@ ecol	N	thym	FP
 ecol	N	thymd	FP
 ecol	N	trp__L	TP
 ecol	N	tym	FP
-ecol	N	tyr__L	FN
+ecol	N	tyr__L	TP
 ecol	N	ura	FP
 ecol	N	urate	FP
 ecol	N	urea	FP
@@ -334,7 +334,7 @@ ecol	P	23cump	TP
 ecol	P	2ameph	TP
 ecol	P	2doxg6p	FN
 ecol	P	2pg	TP
-ecol	P	2pglyc	FN
+ecol	P	2pglyc	TP
 ecol	P	35ccmp	TN
 ecol	P	3amp	TP
 ecol	P	3cmp	TP
@@ -386,19 +386,19 @@ paer	C	2obut	TN
 paer	C	4abut	TP
 paer	C	4hphac	FN
 paer	C	abt__D	TN
-paer	C	ac	FN
+paer	C	ac	TP
 paer	C	acgala	TN
 paer	C	acgam	FN
-paer	C	acon_C	FN
-paer	C	akg	FN
+paer	C	acon_C	TP
+paer	C	akg	TP
 paer	C	ala__D	FN
 paer	C	ala__L	TP
 paer	C	arab__L	TN
-paer	C	asn__L	FN
-paer	C	asp__L	FN
+paer	C	asn__L	TP
+paer	C	asp__L	TP
 paer	C	btd_RR	TN
 paer	C	cellb	TN
-paer	C	cit	FN
+paer	C	cit	TP
 paer	C	crn	TP
 paer	C	dxtrn	TN
 paer	C	etha	TP
@@ -407,21 +407,21 @@ paer	C	fru	TP
 paer	C	fuc__L	TN
 paer	C	g1p	FP
 paer	C	g6p	TN
-paer	C	gal	FP
-paer	C	galctn__D	TN
-paer	C	galur	TN
+paer	C	gal	TN
+paer	C	galctn__D	FP
+paer	C	galur	FP
 paer	C	gam	TN
 paer	C	glc__D	TP
 paer	C	glcn__D	FN
 paer	C	glcr	TN
-paer	C	glcur	TN
+paer	C	glcur	FP
 paer	C	glu__L	TP
 paer	C	gly_asp__L	TN
 paer	C	gly_glu__L	TN
 paer	C	glyc	TP
 paer	C	glyc3p	FP
 paer	C	glycogen	TN
-paer	C	his__L	FN
+paer	C	his__L	TP
 paer	C	inost	FP
 paer	C	ins	TP
 paer	C	itacon	FN
@@ -437,7 +437,7 @@ paer	C	melib	TN
 paer	C	mnl	TP
 paer	C	orn__L	TP
 paer	C	peamn	TN
-paer	C	phe__L	TN
+paer	C	phe__L	FP
 paer	C	ppa	TP
 paer	C	pro__L	TP
 paer	C	ptrc	TP
@@ -445,13 +445,13 @@ paer	C	quin	FN
 paer	C	raffin	TN
 paer	C	rbt	TN
 paer	C	rmn	TN
-paer	C	sbt__D	TN
+paer	C	sbt__D	FP
 paer	C	sebacid	TN
-paer	C	ser__D	TN
-paer	C	ser__L	FN
-paer	C	succ	FN
+paer	C	ser__D	FP
+paer	C	ser__L	TP
+paer	C	succ	TP
 paer	C	sucr	FP
-paer	C	thr__L	TN
+paer	C	thr__L	FP
 paer	C	thymd	TN
 paer	C	tre	FP
 paer	C	urcan	FN
@@ -461,16 +461,16 @@ rsol	C	12ppd__S	FP
 rsol	C	2a2dglc	TN
 rsol	C	2hb	TN
 rsol	C	2obut	TN
-rsol	C	4abut	FN
-rsol	C	4hbz	TN
-rsol	C	4hphac	TN
+rsol	C	4abut	TP
+rsol	C	4hbz	FP
+rsol	C	4hphac	FP
 rsol	C	4hpro_LT	FP
 rsol	C	5aptn	TN
 rsol	C	5dglcn	TN
 rsol	C	5oxpro	TN
 rsol	C	abt	TN
 rsol	C	abt__D	FP
-rsol	C	ac	FN
+rsol	C	ac	TP
 rsol	C	acac	TN
 rsol	C	acgal	TN
 rsol	C	acgam	TN
@@ -486,18 +486,18 @@ rsol	C	all__D	TN
 rsol	C	arab__D	TN
 rsol	C	arab__L	TN
 rsol	C	arbt	TN
-rsol	C	arg__L	TN
-rsol	C	asn__L	FN
+rsol	C	arg__L	FP
+rsol	C	asn__L	TP
 rsol	C	asp__D	TN
-rsol	C	asp__L	FN
+rsol	C	asp__L	TP
 rsol	C	bhb	TN
 rsol	C	bromosucc	FN
-rsol	C	but	TN
+rsol	C	but	FP
 rsol	C	cellb	TN
-rsol	C	cit	FN
+rsol	C	cit	TP
 rsol	C	crn	FP
 rsol	C	dad_2	TN
-rsol	C	dca	TN
+rsol	C	dca	FP
 rsol	C	dextrin	TN
 rsol	C	dha	TN
 rsol	C	etha	TN
@@ -506,7 +506,7 @@ rsol	C	for	TN
 rsol	C	fru	FP
 rsol	C	fuc__D	TN
 rsol	C	fuc__L	TN
-rsol	C	fum	FN
+rsol	C	fum	TP
 rsol	C	g1p	TN
 rsol	C	g6p	TN
 rsol	C	gal	FN
@@ -517,30 +517,30 @@ rsol	C	gam	TN
 rsol	C	glc__D	TP
 rsol	C	glc__L	TN
 rsol	C	glcn	TP
-rsol	C	glcr	FN
-rsol	C	glcur	FN
+rsol	C	glcr	TP
+rsol	C	glcur	TP
 rsol	C	gln__L	TP
 rsol	C	glu__L	TP
 rsol	C	glx	TN
-rsol	C	gly	TN
+rsol	C	gly	FP
 rsol	C	glyc	TP
-rsol	C	glyclt	FN
+rsol	C	glyclt	TP
 rsol	C	glycogen	TN
-rsol	C	his__L	TN
+rsol	C	his__L	FP
 rsol	C	hom__L	TN
 rsol	C	3hoxpac	TN
-rsol	C	hxa	TN
-rsol	C	ile__L	TN
-rsol	C	inost	TN
+rsol	C	hxa	FP
+rsol	C	ile__L	FP
+rsol	C	inost	FP
 rsol	C	ins	TN
 rsol	C	itacon	TN
 rsol	C	lac__L	TP
 rsol	C	lcts	TN
-rsol	C	leu__L	TN
-rsol	C	lys__L	TN
+rsol	C	leu__L	FP
+rsol	C	lys__L	FP
 rsol	C	lyx__L	TN
-rsol	C	mal__D	TN
-rsol	C	mal__L	FN
+rsol	C	mal__D	FP
+rsol	C	mal__L	TP
 rsol	C	malt	FP
 rsol	C	malttr	FP
 rsol	C	man	FP
@@ -548,16 +548,16 @@ rsol	C	mannan	TN
 rsol	C	mbdg	TN
 rsol	C	melib	FP
 rsol	C	met__L	TN
-rsol	C	mnl	TP
+rsol	C	mnl	FN
 rsol	C	orn	FP
 rsol	C	oxa	TN
 rsol	C	pala	TN
-rsol	C	peamn	TN
+rsol	C	peamn	FP
 rsol	C	pectin	FN
-rsol	C	phe__L	TN
+rsol	C	phe__L	FP
 rsol	C	ppa	FP
 rsol	C	pro__L	FP
-rsol	C	ptrc	TN
+rsol	C	ptrc	FP
 rsol	C	pyr	TP
 rsol	C	quin	FN
 rsol	C	raffin	FP
@@ -568,21 +568,21 @@ rsol	C	salc	TN
 rsol	C	salcn	TN
 rsol	C	sbt__D	TP
 rsol	C	ser__D	TN
-rsol	C	ser__L	TN
+rsol	C	ser__L	FP
 rsol	C	srb__L	TN
-rsol	C	succ	FN
+rsol	C	succ	TP
 rsol	C	sucr	TP
 rsol	C	tag__D	TN
 rsol	C	tartr__M	TN
 rsol	C	tartr__D	TN
-rsol	C	tartr__L	FN
+rsol	C	tartr__L	TP
 rsol	C	thr__D	TN
-rsol	C	thr__L	TN
+rsol	C	thr__L	FP
 rsol	C	thymd	TN
 rsol	C	tre	TP
 rsol	C	tym	TN
 rsol	C	uri	TN
-rsol	C	val__L	TN
+rsol	C	val__L	FP
 rsol	C	xyl__D	TN
 rsol	C	xylt	TN
 rsol	N	4abut	TP
@@ -601,11 +601,11 @@ rsol	N	ala__L	TP
 rsol	N	alltn	FP
 rsol	N	arg__L	FP
 rsol	N	asn__L	TP
-rsol	N	asp__D	TP
+rsol	N	asp__D	FN
 rsol	N	asp__L	TP
 rsol	N	citr__L	FN
 rsol	N	csn	TN
-rsol	N	cys__L	FN
+rsol	N	cys__L	TP
 rsol	N	cytd	TN
 rsol	N	etha	TN
 rsol	N	frmd	TN
@@ -622,7 +622,7 @@ rsol	N	hom__L	TN
 rsol	N	ile__L	FP
 rsol	N	ins	TN
 rsol	N	leu__L	FP
-rsol	N	lys__D	TN
+rsol	N	lys__D	FP
 rsol	N	lys__L	FP
 rsol	N	met__L	TN
 rsol	N	mma	TN
@@ -637,9 +637,9 @@ rsol	N	ptrc	FP
 rsol	N	ser__D	TN
 rsol	N	ser__L	TP
 rsol	N	thr__L	TP
-rsol	N	thym	TN
+rsol	N	thym	FP
 rsol	N	thymd	TN
-rsol	N	trp__L	FN
+rsol	N	trp__L	TP
 rsol	N	tym	TN
 rsol	N	tyr__L	TP
 rsol	N	ura	FP
@@ -655,7 +655,7 @@ rsol	P	23cgmp	FP
 rsol	P	23cump	FP
 rsol	P	2ameph	TN
 rsol	P	2pg	TN
-rsol	P	2pglyc	TN
+rsol	P	2pglyc	FP
 rsol	P	35ccmp	TN
 rsol	P	35cgmp	TN
 rsol	P	3amp	FP
@@ -689,54 +689,54 @@ rsol	P	tmp	TN
 rsol	P	tyrp	TN
 rsol	P	ump	TN
 rsol	S	3sala	FN
-rsol	S	Lcyst	TN
-rsol	S	cys__D	TN
-rsol	S	cys__L	FN
+rsol	S	Lcyst	FP
+rsol	S	cys__D	FP
+rsol	S	cys__L	TP
 rsol	S	cysam	TN
 rsol	S	cyst__L	TN
 rsol	S	djenk	TN
-rsol	S	gthrd	TN
+rsol	S	gthrd	FP
 rsol	S	hyptaur	TN
-rsol	S	isetac	TN
+rsol	S	isetac	FP
 rsol	S	lanth	TN
 rsol	S	met__D	FN
 rsol	S	met__L	TN
 rsol	S	metsox_S__L	FN
-rsol	S	mso3	TN
+rsol	S	mso3	FP
 rsol	S	so4	FP
-rsol	S	taur	TN
+rsol	S	taur	FP
 rsol	S	tchola	TN
-rsol	S	tsul	TN
+rsol	S	tsul	FP
 sone	C	4hbz	TN
-sone	C	ac	FN
+sone	C	ac	TP
 sone	C	acgam	FN
 sone	C	adn	TP
 sone	C	ala__D	FP
 sone	C	ala__L	FP
 sone	C	arab__D	TN
 sone	C	arab__L	TN
-sone	C	arg__L	TN
-sone	C	asn__L	TN
-sone	C	asp__L	TN
+sone	C	arg__L	FP
+sone	C	asn__L	FP
+sone	C	asp__L	FP
 sone	C	but	FP
 sone	C	cellb	TN
-sone	C	cit	TN
+sone	C	cit	FP
 sone	C	citr__L	TN
 sone	C	crn	TN
 sone	C	csn	TN
 sone	C	cytd	TP
 sone	C	drib	FP
-sone	C	etoh	TN
+sone	C	etoh	FP
 sone	C	fru	FP
 sone	C	fuc__L	TN
 sone	C	gal	FP
 sone	C	glc__D	FP
 sone	C	glcn	FP
-sone	C	glcur	FP
+sone	C	glcur	TN
 sone	C	gln__L	TP
-sone	C	gly	TN
-sone	C	glyc	TN
-sone	C	glyclt	TN
+sone	C	gly	FP
+sone	C	glyc	FP
+sone	C	glyclt	FP
 sone	C	his__L	FP
 sone	C	ile__L	TP
 sone	C	inost	TN
@@ -747,8 +747,8 @@ sone	C	lcts	TN
 sone	C	leu__L	TN
 sone	C	lys__L	TN
 sone	C	mal__D	TN
-sone	C	mal__L	TN
-sone	C	malt	FP
+sone	C	mal__L	FP
+sone	C	malt	TN
 sone	C	man	FP
 sone	C	met__L	TN
 sone	C	mnl	FP
diff --git a/carveme/data/benchmark/results/essentiality.tsv b/carveme/data/benchmark/results/essentiality.tsv
index 4f53f1b..8a85dbe 100644
--- a/carveme/data/benchmark/results/essentiality.tsv
+++ b/carveme/data/benchmark/results/essentiality.tsv
@@ -1,4985 +1,5041 @@
 org	gene	value
+bsub	G_BSU37120	FN
+bsub	G_BSU15230	TP
 bsub	G_BSU24270	TP
+bsub	G_BSU00090	FN
+bsub	G_BSU29210	FN
+bsub	G_BSU37150	TP
 bsub	G_BSU15680	TP
-bsub	G_BSU16550	TP
-bsub	G_BSU30550	TP
-bsub	G_BSU30780	TP
-bsub	G_BSU19360	FN
+bsub	G_BSU16770	TP
+bsub	G_BSU15200	TP
+bsub	G_BSU22890	FN
+bsub	G_BSU29200	FN
 bsub	G_BSU17890	TP
-bsub	G_BSU22490	TP
-bsub	G_BSU31630	FN
 bsub	G_BSU01370	TP
-bsub	G_BSU11340	TP
-bsub	G_BSU22890	FN
-bsub	G_BSU00500	TP
-bsub	G_BSU00280	TP
-bsub	G_BSU24310	FN
-bsub	G_BSU00680	FN
-bsub	G_BSU15200	TP
-bsub	G_BSU36760	FN
-bsub	G_BSU00460	TP
-bsub	G_BSU37120	FN
-bsub	G_BSU35760	TP
 bsub	G_BSU30790	TP
-bsub	G_BSU15910	TP
+bsub	G_BSU00280	TP
+bsub	G_BSU22440	FN
+bsub	G_BSU30820	TP
 bsub	G_BSU32170	TP
-bsub	G_BSU31650	FN
-bsub	G_BSU04620	FN
-bsub	G_BSU29200	FN
 bsub	G_BSU29190	FN
 bsub	G_BSU31610	FN
+bsub	G_BSU35740	TP
+bsub	G_BSU35760	TP
+bsub	G_BSU31620	FN
+bsub	G_BSU36760	FN
+bsub	G_BSU34790	FN
+bsub	G_BSU00500	TP
+bsub	G_BSU24350	FN
+bsub	G_BSU22490	TP
+bsub	G_BSU33930	TP
+bsub	G_BSU28390	FN
+bsub	G_BSU17390	FN
+bsub	G_BSU35710	TP
+bsub	G_BSU24310	FN
 bsub	G_BSU40550	FN
-bsub	G_BSU00090	FN
-bsub	G_BSU35530	TP
-bsub	G_BSU15900	TP
-bsub	G_BSU29210	FN
+bsub	G_BSU16750	TP
 bsub	G_BSU30800	FN
+bsub	G_BSU00510	TP
+bsub	G_BSU16550	TP
+bsub	G_BSU30780	TP
 bsub	G_BSU35750	TP
-bsub	G_BSU37150	TP
-bsub	G_BSU22440	FN
-bsub	G_BSU15220	FN
-bsub	G_BSU17380	FN
-bsub	G_BSU34790	FN
-bsub	G_BSU35720	TP
-bsub	G_BSU16750	TP
-bsub	G_BSU24350	FN
 bsub	G_BSU22830	TP
-bsub	G_BSU33920	FN
-bsub	G_BSU31620	FN
-bsub	G_BSU17390	FN
+bsub	G_BSU15900	TP
 bsub	G_BSU29790	TP
-bsub	G_BSU15230	TP
-bsub	G_BSU35700	TP
-bsub	G_BSU04570	TP
-bsub	G_BSU00510	TP
-bsub	G_BSU35740	TP
-bsub	G_BSU14580	FN
-bsub	G_BSU04560	TP
+bsub	G_BSU00680	FN
 bsub	G_BSU01780	TP
-bsub	G_BSU03130	TP
-bsub	G_BSU16770	TP
+bsub	G_BSU04560	TP
 bsub	G_BSU24340	FN
-bsub	G_BSU32110	FN
-bsub	G_BSU33930	FN
-bsub	G_BSU35710	TP
+bsub	G_BSU19360	FN
+bsub	G_BSU15910	TP
+bsub	G_BSU15220	FN
+bsub	G_BSU00460	TP
+bsub	G_BSU04570	TP
+bsub	G_BSU03130	TP
 bsub	G_BSU21810	FN
-bsub	G_BSU28390	FN
-bsub	G_BSU30820	TP
 bsub	G_BSU31600	FN
+bsub	G_BSU35530	TP
+bsub	G_BSU35700	TP
+bsub	G_BSU11340	TP
+bsub	G_BSU35720	TP
+bsub	G_BSU14580	FN
+bsub	G_BSU33920	FN
+bsub	G_BSU31650	FN
+bsub	G_BSU30550	TP
+bsub	G_BSU17380	FN
 bsub	G_BSU36900	FN
+bsub	G_BSU04620	FN
+bsub	G_BSU31630	FN
+bsub	G_BSU32110	FN
+bsub	G_BSU14610	TN
+bsub	G_BSU15790	TN
+bsub	G_BSU17000	TN
+bsub	G_BSU30560	TN
+bsub	G_BSU30220	TN
+bsub	G_BSU30270	TN
+bsub	G_BSU23080	TN
+bsub	G_BSU25500	TN
+bsub	G_BSU28250	TN
+bsub	G_BSU07840	TN
+bsub	G_BSU13130	TN
+bsub	G_BSU08460	TN
+bsub	G_BSU18260	TN
+bsub	G_BSU27040	TN
+bsub	G_BSU12330	TN
+bsub	G_BSU30970	TN
+bsub	G_BSU38060	TN
+bsub	G_BSU18210	TN
 bsub	G_BSU06310	TN
-bsub	G_BSU24130	TN
-bsub	G_BSU02750	TN
-bsub	G_BSU08790	TN
-bsub	G_BSU08000	TN
-bsub	G_BSU32100	TN
+bsub	G_BSU21920	FP
+bsub	G_BSU32480	TN
+bsub	G_BSU10360	TN
+bsub	G_BSU13910	TN
+bsub	G_BSU04030	TN
+bsub	G_BSU28140	TN
+bsub	G_BSU19370	TN
+bsub	G_BSU24070	TN
+bsub	G_BSU23800	TN
+bsub	G_BSU07920	TN
+bsub	G_BSU22060	TN
+bsub	G_BSU00270	TN
+bsub	G_BSU29470	TN
 bsub	G_BSU32260	TN
-bsub	G_BSU38760	TN
-bsub	G_BSU32200	TN
-bsub	G_BSU24980	TN
-bsub	G_BSU31970	TN
-bsub	G_BSU16510	TN
-bsub	G_BSU29020	TN
-bsub	G_BSU08440	TN
-bsub	G_BSU08850	TN
-bsub	G_BSU13120	TN
-bsub	G_BSU38500	FP
-bsub	G_BSU38830	TN
-bsub	G_BSU29600	TN
-bsub	G_BSU15850	TN
-bsub	G_BSU01580	TN
-bsub	G_BSU07810	TN
-bsub	G_BSU37790	TN
-bsub	G_BSU15510	TN
+bsub	G_BSU12390	TN
+bsub	G_BSU28560	TN
+bsub	G_BSU22660	TN
+bsub	G_BSU30070	TN
+bsub	G_BSU30540	TN
+bsub	G_BSU04520	TN
+bsub	G_BSU27810	TN
 bsub	G_BSU32510	TN
-bsub	G_BSU10360	TN
-bsub	G_BSU04740	TN
-bsub	G_BSU12020	TN
+bsub	G_BSU23560	TN
+bsub	G_BSU38150	TN
+bsub	G_BSU16760	TN
+bsub	G_BSU12010	TN
+bsub	G_BSU14880	TN
+bsub	G_BSU31580	TN
+bsub	G_BSU15500	TN
+bsub	G_BSU10170	TN
+bsub	G_BSU01630	TN
+bsub	G_BSU15510	TN
+bsub	G_BSU07700	TN
+bsub	G_BSU36660	TN
+bsub	G_BSU29680	TN
 bsub	G_BSU21770	TN
-bsub	G_BSU22090	TN
-bsub	G_BSU38580	TN
-bsub	G_BSU29180	TN
-bsub	G_BSU38170	TN
-bsub	G_BSU03910	TN
-bsub	G_BSU40070	TN
-bsub	G_BSU24140	TN
-bsub	G_BSU29710	TN
-bsub	G_BSU38510	FP
-bsub	G_BSU30270	TN
-bsub	G_BSU12960	TN
+bsub	G_BSU15560	TN
+bsub	G_BSU32000	TN
+bsub	G_BSU11650	TN
 bsub	G_BSU06370	TN
-bsub	G_BSU30220	TN
-bsub	G_BSU19310	TN
-bsub	G_BSU13900	TN
-bsub	G_BSU37280	TN
-bsub	G_BSU22700	FP
-bsub	G_BSU25020	TN
-bsub	G_BSU39400	TN
-bsub	G_BSU16760	TN
-bsub	G_BSU34890	TN
-bsub	G_BSU18210	TN
+bsub	G_BSU26970	TN
+bsub	G_BSU00140	TN
+bsub	G_BSU01680	TN
+bsub	G_BSU40190	TN
+bsub	G_BSU03910	TN
+bsub	G_BSU11230	TN
+bsub	G_BSU38140	TN
+bsub	G_BSU30300	TN
+bsub	G_BSU39750	TN
+bsub	G_BSU06970	TN
+bsub	G_BSU08440	TN
+bsub	G_BSU18250	TN
+bsub	G_BSU30440	TN
+bsub	G_BSU30740	TN
+bsub	G_BSU39370	TN
+bsub	G_BSU18230	TN
 bsub	G_BSU33390	TN
-bsub	G_BSU30710	TN
-bsub	G_BSU13910	TN
-bsub	G_BSU27070	TN
-bsub	G_BSU38390	TN
-bsub	G_BSU00750	TN
-bsub	G_BSU06170	TN
-bsub	G_BSU08460	TN
+bsub	G_BSU09850	TN
+bsub	G_BSU04740	TN
+bsub	G_BSU30200	TN
+bsub	G_BSU30410	TN
+bsub	G_BSU08180	TN
+bsub	G_BSU27200	TN
+bsub	G_BSU28720	TN
+bsub	G_BSU06660	TN
+bsub	G_BSU39860	TN
+bsub	G_BSU22090	TN
 bsub	G_BSU05900	TN
-bsub	G_BSU32460	TN
-bsub	G_BSU11240	TN
-bsub	G_BSU21920	FP
-bsub	G_BSU32470	TN
-bsub	G_BSU02230	TN
-bsub	G_BSU31980	TN
-bsub	G_BSU18540	TN
+bsub	G_BSU30830	TN
+bsub	G_BSU38160	TN
+bsub	G_BSU17680	TN
+bsub	G_BSU38530	FP
+bsub	G_BSU29010	TN
+bsub	G_BSU30420	TN
+bsub	G_BSU13120	TN
+bsub	G_BSU06170	TN
+bsub	G_BSU39730	TN
+bsub	G_BSU22480	TN
+bsub	G_BSU39390	TN
+bsub	G_BSU32490	TN
 bsub	G_BSU38710	TN
-bsub	G_BSU00760	TN
-bsub	G_BSU31050	TN
-bsub	G_BSU18470	TN
-bsub	G_BSU10130	TN
-bsub	G_BSU08650	TN
-bsub	G_BSU17460	FP
-bsub	G_BSU03000	TN
-bsub	G_BSU37260	TN
-bsub	G_BSU06460	TN
-bsub	G_BSU30300	TN
-bsub	G_BSU15590	TN
-bsub	G_BSU26650	TN
-bsub	G_BSU18570	TN
-bsub	G_BSU27040	TN
-bsub	G_BSU15580	TN
-bsub	G_BSU06530	TN
-bsub	G_BSU17600	TN
-bsub	G_BSU25300	TN
-bsub	G_BSU33940	TN
-bsub	G_BSU14630	TN
-bsub	G_BSU38150	TN
-bsub	G_BSU39380	TN
-bsub	G_BSU22100	TN
-bsub	G_BSU39720	TN
-bsub	G_BSU25500	TN
-bsub	G_BSU30290	TN
-bsub	G_BSU22480	TN
-bsub	G_BSU27850	TN
-bsub	G_BSU35730	FP
-bsub	G_BSU13170	TN
-bsub	G_BSU39920	TN
-bsub	G_BSU36010	TN
-bsub	G_BSU38060	TN
-bsub	G_BSU21820	TN
-bsub	G_BSU07700	TN
-bsub	G_BSU31060	TN
-bsub	G_BSU31930	TN
-bsub	G_BSU30770	TN
-bsub	G_BSU00140	TN
-bsub	G_BSU29690	TN
-bsub	G_BSU07840	TN
-bsub	G_BSU09280	TN
-bsub	G_BSU09680	TN
-bsub	G_BSU30440	TN
-bsub	G_BSU24050	FP
-bsub	G_BSU12080	TN
-bsub	G_BSU03290	TN
+bsub	G_BSU29020	TN
+bsub	G_BSU14590	TN
+bsub	G_BSU14860	TN
+bsub	G_BSU15520	TN
+bsub	G_BSU31990	TN
+bsub	G_BSU00780	TN
+bsub	G_BSU03150	FP
+bsub	G_BSU27060	TN
+bsub	G_BSU18540	TN
 bsub	G_BSU39060	TN
-bsub	G_BSU39390	TN
-bsub	G_BSU03320	TN
-bsub	G_BSU36130	TN
-bsub	G_BSU00740	TN
-bsub	G_BSU06160	TN
-bsub	G_BSU15550	TN
-bsub	G_BSU18000	TN
-bsub	G_BSU30200	TN
-bsub	G_BSU18220	TN
-bsub	G_BSU09410	TN
-bsub	G_BSU28790	TN
-bsub	G_BSU31350	TN
-bsub	G_BSU29140	TN
-bsub	G_BSU32490	TN
-bsub	G_BSU06520	TN
-bsub	G_BSU11720	TN
-bsub	G_BSU23610	TN
-bsub	G_BSU04520	TN
-bsub	G_BSU08710	TN
+bsub	G_BSU15850	TN
+bsub	G_BSU31660	TN
+bsub	G_BSU24980	TN
+bsub	G_BSU39720	TN
+bsub	G_BSU23570	TN
+bsub	G_BSU23280	TN
+bsub	G_BSU23920	TN
+bsub	G_BSU37280	TN
+bsub	G_BSU32450	TN
+bsub	G_BSU08060	TN
+bsub	G_BSU15600	TN
+bsub	G_BSU28470	TN
+bsub	G_BSU19580	TN
+bsub	G_BSU27860	FP
+bsub	G_BSU24850	TN
+bsub	G_BSU06470	TN
+bsub	G_BSU24140	TN
+bsub	G_BSU27050	TN
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+bsub	G_BSU36920	TN
+bsub	G_BSU23850	TN
+bsub	G_BSU32410	TN
+bsub	G_BSU04470	TN
+bsub	G_BSU06460	TN
+bsub	G_BSU37100	TN
+bsub	G_BSU37320	TN
+bsub	G_BSU29180	TN
 bsub	G_BSU07800	TN
-bsub	G_BSU30430	TN
-bsub	G_BSU22610	TN
-bsub	G_BSU29470	TN
-bsub	G_BSU38750	TN
-bsub	G_BSU28140	TN
+bsub	G_BSU03330	TN
+bsub	G_BSU29120	TN
+bsub	G_BSU25300	TN
 bsub	G_BSU36000	TN
-bsub	G_BSU15520	TN
+bsub	G_BSU27070	TN
+bsub	G_BSU14630	TN
+bsub	G_BSU24090	TN
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+bsub	G_BSU31322	TN
+bsub	G_BSU30530	TN
+bsub	G_BSU22600	FP
 bsub	G_BSU26700	TN
-bsub	G_BSU24990	TN
-bsub	G_BSU22670	TN
-bsub	G_BSU14400	TN
-bsub	G_BSU33400	TN
-bsub	G_BSU32130	TN
-bsub	G_BSU10790	TN
-bsub	G_BSU10140	TN
-bsub	G_BSU09530	TN
-bsub	G_BSU23570	TN
-bsub	G_BSU24080	TN
-bsub	G_BSU38200	TN
-bsub	G_BSU05740	TN
-bsub	G_BSU15490	TN
-bsub	G_BSU08860	TN
-bsub	G_BSU25310	TN
-bsub	G_BSU27810	TN
-bsub	G_BSU39260	TN
-bsub	G_BSU12330	TN
-bsub	G_BSU18260	TN
-bsub	G_BSU27060	TN
-bsub	G_BSU03790	TN
-bsub	G_BSU10120	TN
-bsub	G_BSU29620	TN
-bsub	G_BSU26590	TN
-bsub	G_BSU24030	FP
-bsub	G_BSU22730	FP
-bsub	G_BSU37490	TN
-bsub	G_BSU15480	TN
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 bsub	G_BSU36710	TN
-bsub	G_BSU17150	TN
-bsub	G_BSU13960	TN
-bsub	G_BSU12950	TN
-bsub	G_BSU00150	TN
-bsub	G_BSU37500	TN
-bsub	G_BSU08840	TN
-bsub	G_BSU28120	TN
-bsub	G_BSU28310	TN
-bsub	G_BSU03270	TN
-bsub	G_BSU38190	TN
-bsub	G_BSU32430	TN
-bsub	G_BSU29130	TN
-bsub	G_BSU26860	TN
-bsub	G_BSU29010	TN
-bsub	G_BSU01610	TN
-bsub	G_BSU08820	TN
-bsub	G_BSU15790	TN
-bsub	G_BSU30560	TN
-bsub	G_BSU30960	TN
-bsub	G_BSU30410	TN
-bsub	G_BSU16990	TN
-bsub	G_BSU23850	TN
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+bsub	G_BSU40420	TN
 bsub	G_BSU15540	TN
-bsub	G_BSU38140	TN
-bsub	G_BSU31322	TN
-bsub	G_BSU03981	TN
-bsub	G_BSU37270	TN
-bsub	G_BSU30740	TN
-bsub	G_BSU06440	TN
-bsub	G_BSU24970	TN
-bsub	G_BSU28170	TN
-bsub	G_BSU08830	TN
-bsub	G_BSU28250	TN
-bsub	G_BSU40110	TN
-bsub	G_BSU22070	TN
-bsub	G_BSU32440	TN
-bsub	G_BSU39740	TN
-bsub	G_BSU28560	TN
-bsub	G_BSU24160	TN
-bsub	G_BSU28150	TN
-bsub	G_BSU26970	TN
-bsub	G_BSU04030	TN
-bsub	G_BSU22600	FP
-bsub	G_BSU23920	TN
-bsub	G_BSU28440	TN
-bsub	G_BSU14610	TN
-bsub	G_BSU36640	TN
-bsub	G_BSU16670	FP
-bsub	G_BSU23080	TN
-bsub	G_BSU03990	TN
-bsub	G_BSU15600	TN
-bsub	G_BSU28800	TN
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+bsub	G_BSU14400	TN
+bsub	G_BSU37060	TN
+bsub	G_BSU39260	TN
+bsub	G_BSU38630	TN
+bsub	G_BSU28750	TN
+bsub	G_BSU03290	TN
+bsub	G_BSU08790	TN
+bsub	G_BSU28080	TN
+bsub	G_BSU33960	TN
+bsub	G_BSU07610	TN
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+bsub	G_BSU05740	TN
+bsub	G_BSU29710	TN
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+bsub	G_BSU09290	TN
+bsub	G_BSU19630	TN
+bsub	G_BSU07810	TN
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+bsub	G_BSU08450	TN
 bsub	G_BSU17660	TN
-bsub	G_BSU35670	TN
-bsub	G_BSU07990	TN
-bsub	G_BSU10020	TN
-bsub	G_BSU02460	TN
-bsub	G_BSU18480	TN
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 bsub	G_BSU10870	TN
-bsub	G_BSU26710	TN
-bsub	G_BSU32250	TN
-bsub	G_BSU38040	TN
-bsub	G_BSU13130	TN
-bsub	G_BSU06500	TN
-bsub	G_BSU04360	TN
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+bsub	G_BSU30450	TN
+bsub	G_BSU18570	TN
+bsub	G_BSU22110	TN
+bsub	G_BSU40340	TN
+bsub	G_BSU37660	TN
+bsub	G_BSU14600	TN
 bsub	G_BSU11640	TN
-bsub	G_BSU32500	TN
-bsub	G_BSU36890	TN
-bsub	G_BSU09300	TN
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+bsub	G_BSU22960	TN
+bsub	G_BSU31640	TN
+bsub	G_BSU38830	TN
+bsub	G_BSU28780	TN
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+bsub	G_BSU18120	TN
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+bsub	G_BSU16510	TN
 bsub	G_BSU08070	TN
-bsub	G_BSU24090	TN
-bsub	G_BSU03300	TN
-bsub	G_BSU04340	TN
-bsub	G_BSU06480	TN
-bsub	G_BSU23760	TN
-bsub	G_BSU38630	TN
-bsub	G_BSU39710	TN
-bsub	G_BSU07570	TN
-bsub	G_BSU24040	FP
-bsub	G_BSU23070	TN
-bsub	G_BSU15650	TN
-bsub	G_BSU39760	TN
-bsub	G_BSU14520	TN
-bsub	G_BSU06430	TN
-bsub	G_BSU06450	TN
-bsub	G_BSU39750	TN
-bsub	G_BSU30830	TN
-bsub	G_BSU30530	TN
-bsub	G_BSU15560	TN
-bsub	G_BSU21900	TN
-bsub	G_BSU38520	FP
-bsub	G_BSU34880	TN
-bsub	G_BSU27870	TN
-bsub	G_BSU24850	TN
-bsub	G_BSU24170	TN
-bsub	G_BSU37170	TN
-bsub	G_BSU14590	TN
-bsub	G_BSU19520	TN
-bsub	G_BSU34190	TN
-bsub	G_BSU37100	TN
-bsub	G_BSU19630	TN
-bsub	G_BSU26690	TN
-bsub	G_BSU28130	TN
-bsub	G_BSU39730	TN
-bsub	G_BSU08080	TN
-bsub	G_BSU11230	TN
-bsub	G_BSU12380	TN
-bsub	G_BSU15860	TN
-bsub	G_BSU37110	TN
-bsub	G_BSU07610	TN
-bsub	G_BSU29700	TN
-bsub	G_BSU27200	TN
-bsub	G_BSU29050	TN
-bsub	G_BSU30970	TN
-bsub	G_BSU08180	TN
-bsub	G_BSU13890	TN
-bsub	G_BSU39780	TN
-bsub	G_BSU12340	TN
-bsub	G_BSU28730	TN
-bsub	G_BSU14600	TN
-bsub	G_BSU28750	TN
-bsub	G_BSU27220	TN
-bsub	G_BSU09850	TN
-bsub	G_BSU24740	TN
+bsub	G_BSU23500	TN
+bsub	G_BSU06500	TN
 bsub	G_BSU12360	TN
-bsub	G_BSU23560	TN
-bsub	G_BSU09840	TN
-bsub	G_BSU12300	TN
-bsub	G_BSU22630	TN
 bsub	G_BSU02760	TN
-bsub	G_BSU14390	TN
-bsub	G_BSU24950	TN
-bsub	G_BSU32180	TN
-bsub	G_BSU18120	TN
-bsub	G_BSU06970	TN
-bsub	G_BSU23280	TN
-bsub	G_BSU30540	TN
-bsub	G_BSU17610	TN
-bsub	G_BSU22710	FP
-bsub	G_BSU39050	TN
-bsub	G_BSU23800	TN
-bsub	G_BSU22690	TN
-bsub	G_BSU40340	TN
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+bsub	G_BSU08710	TN
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+bsub	G_BSU12950	TN
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 bsub	G_BSU03310	TN
-bsub	G_BSU21870	TN
-bsub	G_BSU36920	TN
-bsub	G_BSU39860	TN
-bsub	G_BSU00270	TN
-bsub	G_BSU31640	TN
-bsub	G_BSU08450	TN
-bsub	G_BSU30420	TN
-bsub	G_BSU27050	TN
-bsub	G_BSU27010	TN
-bsub	G_BSU28260	TN
-bsub	G_BSU00780	TN
-bsub	G_BSU38860	TN
-bsub	G_BSU12840	TN
-bsub	G_BSU23580	TN
-bsub	G_BSU24060	FP
-bsub	G_BSU06490	TN
-bsub	G_BSU33960	TN
-bsub	G_BSU22650	TN
-bsub	G_BSU28280	TN
-bsub	G_BSU27610	TN
-bsub	G_BSU28290	TN
-bsub	G_BSU28430	TN
-bsub	G_BSU32450	TN
-bsub	G_BSU25660	FP
-bsub	G_BSU06420	TN
-bsub	G_BSU39450	TN
-bsub	G_BSU18830	TN
-bsub	G_BSU39360	TN
-bsub	G_BSU33240	TN
-bsub	G_BSU03150	FP
-bsub	G_BSU14860	TN
-bsub	G_BSU30750	TN
 bsub	G_BSU39350	TN
-bsub	G_BSU02350	TN
-bsub	G_BSU30760	TN
-bsub	G_BSU28450	TN
-bsub	G_BSU03050	TN
-bsub	G_BSU40060	TN
-bsub	G_BSU09290	TN
-bsub	G_BSU37060	TN
-bsub	G_BSU32480	TN
+bsub	G_BSU09410	TN
+bsub	G_BSU26650	TN
+bsub	G_BSU37790	TN
+bsub	G_BSU39380	TN
+bsub	G_BSU15650	TN
+bsub	G_BSU12340	TN
+bsub	G_BSU32100	TN
+bsub	G_BSU29130	TN
+bsub	G_BSU31970	TN
 bsub	G_BSU12940	TN
-bsub	G_BSU22640	TN
-bsub	G_BSU22110	TN
-bsub	G_BSU02140	TN
-bsub	G_BSU38530	FP
-bsub	G_BSU12010	TN
-bsub	G_BSU04470	TN
-bsub	G_BSU22060	TN
-bsub	G_BSU29120	TN
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+bsub	G_BSU32200	TN
+bsub	G_BSU29220	TN
+bsub	G_BSU18000	TN
+bsub	G_BSU36890	TN
+bsub	G_BSU28440	TN
+bsub	G_BSU06520	TN
+bsub	G_BSU30760	TN
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+bsub	G_BSU23070	TN
+bsub	G_BSU32460	TN
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+bsub	G_BSU13170	TN
 bsub	G_BSU23770	TN
-bsub	G_BSU12390	TN
-bsub	G_BSU12920	TN
-bsub	G_BSU17680	TN
-bsub	G_BSU19580	TN
-bsub	G_BSU03280	TN
-bsub	G_BSU38050	TN
-bsub	G_BSU24070	TN
-bsub	G_BSU25580	TN
-bsub	G_BSU22960	TN
-bsub	G_BSU03950	TN
-bsub	G_BSU40330	TN
-bsub	G_BSU35010	TN
-bsub	G_BSU18450	TN
+bsub	G_BSU18410	TN
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+bsub	G_BSU13890	TN
+bsub	G_BSU03040	TN
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+bsub	G_BSU17150	TN
 bsub	G_BSU04000	TN
-bsub	G_BSU18670	TN
-bsub	G_BSU11650	TN
-bsub	G_BSU23500	TN
-bsub	G_BSU26810	TN
-bsub	G_BSU10170	TN
-bsub	G_BSU27330	TN
-bsub	G_BSU01620	TN
-bsub	G_BSU06510	TN
-bsub	G_BSU19370	TN
-bsub	G_BSU28270	TN
-bsub	G_BSU28470	TN
-bsub	G_BSU15530	TN
-bsub	G_BSU18230	TN
-bsub	G_BSU00790	TN
-bsub	G_BSU40420	TN
-bsub	G_BSU06660	TN
-bsub	G_BSU12930	TN
-bsub	G_BSU02400	TN
-bsub	G_BSU25420	TN
-bsub	G_BSU39410	TN
-bsub	G_BSU00730	TN
-bsub	G_BSU24150	TN
-bsub	G_BSU30240	TN
-bsub	G_BSU39370	TN
-bsub	G_BSU30450	TN
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+bsub	G_BSU38500	FP
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+bsub	G_BSU09840	TN
+bsub	G_BSU13900	TN
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+bsub	G_BSU09440	TN
+bsub	G_BSU02750	TN
 bsub	G_BSU34660	TN
-bsub	G_BSU22680	TN
-bsub	G_BSU36650	TN
-bsub	G_BSU39270	TN
-bsub	G_BSU34920	TN
+bsub	G_BSU24040	FP
 bsub	G_BSU36120	TN
-bsub	G_BSU31580	TN
-bsub	G_BSU32000	TN
-bsub	G_BSU06470	TN
-bsub	G_BSU27860	TN
-bsub	G_BSU10520	TN
-bsub	G_BSU03040	TN
-bsub	G_BSU22430	TN
-bsub	G_BSU09440	TN
-bsub	G_BSU28080	TN
-bsub	G_BSU06360	TN
-bsub	G_BSU18250	TN
-bsub	G_BSU37660	TN
-bsub	G_BSU15500	TN
-bsub	G_BSU22620	TN
-bsub	G_BSU08090	TN
-bsub	G_BSU28780	TN
-bsub	G_BSU29680	TN
-bsub	G_BSU31660	TN
-bsub	G_BSU40190	TN
-bsub	G_BSU28720	TN
-bsub	G_BSU38160	TN
-bsub	G_BSU12160	TN
-bsub	G_BSU32410	TN
-bsub	G_BSU18410	TN
-bsub	G_BSU22660	TN
-bsub	G_BSU14880	TN
-bsub	G_BSU03060	TN
-bsub	G_BSU08200	TN
-bsub	G_BSU17000	TN
-bsub	G_BSU11330	TN
-bsub	G_BSU01630	TN
-bsub	G_BSU30720	TN
-bsub	G_BSU21690	TN
-bsub	G_BSU02990	TN
-bsub	G_BSU15570	TN
-bsub	G_BSU28740	TN
-bsub	G_BSU01680	TN
-bsub	G_BSU31990	TN
-bsub	G_BSU00930	TN
-bsub	G_BSU07920	TN
-bsub	G_BSU30070	TN
-bsub	G_BSU38240	TN
-bsub	G_BSU03900	TN
-bsub	G_BSU36660	TN
-bsub	G_BSU37320	TN
-bsub	G_BSU24960	TN
-bsub	G_BSU33370	TN
+bsub	G_BSU31930	TN
+bsub	G_BSU06440	TN
+bsub	G_BSU28730	TN
+bsub	G_BSU22650	TN
 bsub	G_BSU12910	TN
-bsub	G_BSU03330	TN
-bsub	G_BSU33380	TN
+bsub	G_BSU02400	TN
+bsub	G_BSU23610	TN
+bsub	G_BSU09680	TN
+bsub	G_BSU12020	TN
+bsub	G_BSU26810	TN
+bsub	G_BSU18450	TN
+bsub	G_BSU17610	TN
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+bsub	G_BSU37490	TN
+bsub	G_BSU38520	FP
+bsub	G_BSU28740	TN
+bsub	G_BSU39740	TN
+bsub	G_BSU32130	TN
+bsub	G_BSU34920	TN
+bsub	G_BSU22100	TN
+bsub	G_BSU28800	TN
+bsub	G_BSU39920	TN
+bsub	G_BSU28790	TN
+bsub	G_BSU38170	TN
+bsub	G_BSU08200	TN
+bsub	G_BSU39780	TN
+bsub	G_BSU08830	TN
+bsub	G_BSU33380	TN
+bsub	G_BSU37260	TN
+bsub	G_BSU39270	TN
+bsub	G_BSU28130	TN
+bsub	G_BSU38860	TN
+bsub	G_BSU22710	FP
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+bsub	G_BSU12840	TN
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+bsub	G_BSU27850	FP
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+bsub	G_BSU24150	TN
+bsub	G_BSU22690	TN
+bsub	G_BSU07990	TN
+bsub	G_BSU22640	TN
+bsub	G_BSU10020	TN
+bsub	G_BSU39450	TN
+bsub	G_BSU38390	TN
+bsub	G_BSU03060	TN
+bsub	G_BSU26710	TN
+bsub	G_BSU09530	TN
+bsub	G_BSU29690	TN
+bsub	G_BSU32500	TN
+bsub	G_BSU40110	TN
+bsub	G_BSU24080	TN
+bsub	G_BSU40330	TN
+bsub	G_BSU32470	TN
+bsub	G_BSU24170	TN
+bsub	G_BSU28280	TN
+bsub	G_BSU29700	TN
+bsub	G_BSU36640	TN
+bsub	G_BSU18670	TN
+bsub	G_BSU03790	TN
+bsub	G_BSU00730	TN
+bsub	G_BSU35730	FP
+bsub	G_BSU12930	TN
+bsub	G_BSU12380	TN
+bsub	G_BSU33240	TN
+bsub	G_BSU08840	TN
+bsub	G_BSU24130	TN
+bsub	G_BSU24030	FP
+bsub	G_BSU30240	TN
+bsub	G_BSU06490	TN
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+bsub	G_BSU06450	TN
+bsub	G_BSU19520	TN
+bsub	G_BSU00150	TN
+bsub	G_BSU10140	TN
+bsub	G_BSU00740	TN
+bsub	G_BSU00750	TN
+bsub	G_BSU00790	TN
+bsub	G_BSU04340	TN
+bsub	G_BSU08090	TN
+bsub	G_BSU32180	TN
+bsub	G_BSU40070	TN
+bsub	G_BSU32250	TN
+bsub	G_BSU37170	TN
+bsub	G_BSU27870	FP
+bsub	G_BSU30720	TN
+bsub	G_BSU39410	TN
+bsub	G_BSU21870	TN
+bsub	G_BSU22610	TN
+bsub	G_BSU03981	TN
+bsub	G_BSU28270	TN
+bsub	G_BSU08080	TN
+bsub	G_BSU31350	TN
+bsub	G_BSU09280	TN
+bsub	G_BSU28290	TN
+bsub	G_BSU38200	TN
+bsub	G_BSU12960	TN
+bsub	G_BSU22700	FP
+bsub	G_BSU15490	TN
+bsub	G_BSU08850	TN
+bsub	G_BSU26690	TN
+bsub	G_BSU39050	TN
+bsub	G_BSU38050	TN
+bsub	G_BSU34880	TN
+bsub	G_BSU30710	TN
+bsub	G_BSU10520	TN
+bsub	G_BSU17600	TN
+bsub	G_BSU27610	TN
+bsub	G_BSU02230	TN
+bsub	G_BSU01610	TN
+bsub	G_BSU18220	TN
+bsub	G_BSU38760	TN
+bsub	G_BSU06480	TN
+bsub	G_BSU36650	TN
+bsub	G_BSU38240	TN
+bsub	G_BSU37500	TN
+bsub	G_BSU29620	TN
+bsub	G_BSU12920	TN
+bsub	G_BSU06420	TN
+bsub	G_BSU29600	TN
+bsub	G_BSU03900	TN
+bsub	G_BSU17460	FP
+bsub	G_BSU08820	TN
+bsub	G_BSU00760	TN
+bsub	G_BSU35670	TN
+bsub	G_BSU08860	TN
+bsub	G_BSU19310	TN
+bsub	G_BSU03280	TN
+bsub	G_BSU31980	TN
+bsub	G_BSU06430	TN
+bsub	G_BSU25580	TN
+bsub	G_BSU32430	TN
+bsub	G_BSU32440	TN
+bsub	G_BSU04360	TN
+bsub	G_BSU29050	TN
+bsub	G_BSU06360	TN
+bsub	G_BSU11240	TN
+bsub	G_BSU18480	TN
+bsub	G_BSU28260	TN
+bsub	G_BSU34190	TN
 bsub	G_BSU06150	TN
-bsub	G_BSU29220	TN
-bsub	G_BSU08060	TN
-ecol	G_b0126	FN
-ecol	G_b3709	FN
-ecol	G_b0033	FN
-ecol	G_b0750	TP
-ecol	G_b3176	TP
-ecol	G_b3771	TP
-ecol	G_b1262	TP
-ecol	G_b3281	FN
-ecol	G_b2533	FN
-ecol	G_b2574	TP
-ecol	G_b3972	TP
-ecol	G_b0915	TP
-ecol	G_b3772	FN
-ecol	G_b1210	TP
-ecol	G_b0074	TP
-ecol	G_b2530	FN
-ecol	G_b0048	FN
-ecol	G_b1264	FN
+bsub	G_BSU00930	TN
+bsub	G_BSU15580	TN
+bsub	G_BSU21900	TN
+bsub	G_BSU14520	TN
+bsub	G_BSU30750	TN
+bsub	G_BSU11720	TN
+bsub	G_BSU01580	TN
+bsub	G_BSU06160	TN
+bsub	G_BSU24960	TN
+bsub	G_BSU25660	FP
+bsub	G_BSU24950	TN
+bsub	G_BSU27010	TN
+bsub	G_BSU03000	TN
+bsub	G_BSU37270	TN
+bsub	G_BSU40060	TN
+bsub	G_BSU03320	TN
+bsub	G_BSU28170	TN
+bsub	G_BSU35010	TN
+bsub	G_BSU23580	TN
+bsub	G_BSU22070	TN
+bsub	G_BSU25310	TN
+bsub	G_BSU12300	TN
+bsub	G_BSU36130	TN
+bsub	G_BSU02140	TN
+bsub	G_BSU14390	TN
+bsub	G_BSU24970	TN
+bsub	G_BSU03270	TN
+bsub	G_BSU33940	FP
+bsub	G_BSU38580	TN
+bsub	G_BSU22680	TN
+bsub	G_BSU03990	TN
+bsub	G_BSU31060	TN
+bsub	G_BSU15550	TN
+bsub	G_BSU11330	TN
+bsub	G_BSU21820	TN
+bsub	G_BSU25020	TN
+bsub	G_BSU08650	TN
+bsub	G_BSU02460	TN
+bsub	G_BSU16990	TN
+bsub	G_BSU01620	TN
+bsub	G_BSU39400	TN
+bsub	G_BSU02350	TN
+bsub	G_BSU10120	TN
+bsub	G_BSU03050	TN
+bsub	G_BSU26590	TN
+bsub	G_BSU22670	TN
+bsub	G_BSU39360	TN
+bsub	G_BSU25420	TN
+bsub	G_BSU28430	TN
+bsub	G_BSU02990	TN
+bsub	G_BSU28310	TN
+bsub	G_BSU26860	TN
+bsub	G_BSU28150	TN
+bsub	G_BSU30430	TN
+bsub	G_BSU38190	TN
+bsub	G_BSU36010	TN
+bsub	G_BSU22630	TN
+bsub	G_BSU06510	TN
+bsub	G_BSU30960	TN
+bsub	G_BSU29140	TN
+bsub	G_BSU22620	TN
+ecol	G_b0103	TP
+ecol	G_b2750	FN
+ecol	G_b2779	FN
+ecol	G_b0166	TP
 ecol	G_b3960	FN
-ecol	G_b2511	FN
+ecol	G_b4006	TP
+ecol	G_b0415	FN
+ecol	G_b3737	FN
+ecol	G_b2599	TP
 ecol	G_b2913	FN
-ecol	G_b0907	FN
-ecol	G_b2942	TP
-ecol	G_b0684	FN
-ecol	G_b2021	TP
-ecol	G_b3607	FN
-ecol	G_b2478	TP
-ecol	G_b3805	TP
-ecol	G_b3843	FN
-ecol	G_b0242	FN
+ecol	G_b3772	FN
+ecol	G_b3639	TP
+ecol	G_b0048	FN
+ecol	G_b3829	FN
+ecol	G_b0524	TP
+ecol	G_b0420	TP
+ecol	G_b3648	TP
 ecol	G_b0523	TP
-ecol	G_b1638	TP
-ecol	G_b0185	FN
-ecol	G_b4040	FN
-ecol	G_b0091	TP
-ecol	G_b4084	FN
-ecol	G_b0918	TP
-ecol	G_b0181	TP
-ecol	G_b2780	TP
-ecol	G_b4005	TP
-ecol	G_b1912	TP
-ecol	G_b2515	TP
-ecol	G_b4177	TP
-ecol	G_b2472	TP
-ecol	G_b0179	TP
-ecol	G_b3939	TP
-ecol	G_b0583	FN
 ecol	G_b0475	FN
-ecol	G_b0134	TP
-ecol	G_b2023	FN
-ecol	G_b4041	FN
-ecol	G_b2747	TP
-ecol	G_b2551	FN
-ecol	G_b1662	FN
-ecol	G_b0175	FN
-ecol	G_b1740	TP
-ecol	G_b0086	TP
-ecol	G_b2329	TP
-ecol	G_b3255	FN
-ecol	G_b0004	TP
-ecol	G_b1779	FN
-ecol	G_b3956	FN
-ecol	G_b0072	TP
-ecol	G_b0720	TP
-ecol	G_b2415	FN
 ecol	G_b3340	FN
-ecol	G_b2599	TP
-ecol	G_b2751	FN
-ecol	G_b3235	FN
+ecol	G_b0474	TP
+ecol	G_b2600	FN
+ecol	G_b0134	TP
+ecol	G_b2478	TP
+ecol	G_b1779	FN
+ecol	G_b2747	TP
+ecol	G_b0087	TP
+ecol	G_b2515	TP
+ecol	G_b1098	TP
+ecol	G_b1281	TP
+ecol	G_b0179	TP
 ecol	G_b0634	FN
+ecol	G_b2926	FN
+ecol	G_b2763	FN
+ecol	G_b0116	FN
+ecol	G_b0733	FN
+ecol	G_b2023	FN
+ecol	G_b4013	TP
+ecol	G_b3607	FN
+ecol	G_b4245	TP
 ecol	G_b0025	TP
-ecol	G_b0029	FN
-ecol	G_b2020	TP
-ecol	G_b0182	TP
-ecol	G_b2563	FN
-ecol	G_b2827	FN
 ecol	G_b3650	FN
-ecol	G_b0420	TP
-ecol	G_b3850	FN
-ecol	G_b3916	FN
-ecol	G_b3738	FN
-ecol	G_b3829	FN
-ecol	G_b0032	FN
-ecol	G_b3640	FN
-ecol	G_b3967	TP
-ecol	G_b2019	TP
-ecol	G_b3770	TP
-ecol	G_b3959	TP
-ecol	G_b0914	FN
-ecol	G_b0071	FN
-ecol	G_b0775	FN
-ecol	G_b3172	FN
+ecol	G_b2312	TP
 ecol	G_b1208	TP
-ecol	G_b2400	FN
-ecol	G_b2411	FN
-ecol	G_b3642	TP
-ecol	G_b3368	TP
-ecol	G_b1288	FN
-ecol	G_b0087	TP
-ecol	G_b4006	TP
-ecol	G_b3941	TP
-ecol	G_b0073	TP
-ecol	G_b3008	FN
-ecol	G_b1215	TP
-ecol	G_b0945	TP
-ecol	G_b3018	TP
-ecol	G_b3958	TP
-ecol	G_b0415	FN
-ecol	G_b0109	TP
-ecol	G_b2235	FN
-ecol	G_b0168	FN
-ecol	G_b3187	TP
-ecol	G_b2557	TP
-ecol	G_b1207	TP
-ecol	G_b2024	TP
-ecol	G_b3940	FN
-ecol	G_b1062	FN
-ecol	G_b4013	TP
-ecol	G_b3729	FN
-ecol	G_b2564	TP
-ecol	G_b0635	FN
-ecol	G_b1093	FN
-ecol	G_b1069	FN
+ecol	G_b0033	FN
+ecol	G_b3870	FN
 ecol	G_b0089	FN
+ecol	G_b2751	FN
+ecol	G_b2827	FN
+ecol	G_b3833	FN
+ecol	G_b3041	TP
+ecol	G_b2025	TP
+ecol	G_b0583	FN
+ecol	G_b3939	TP
 ecol	G_b0142	TP
-ecol	G_b2316	FN
-ecol	G_b1263	FN
-ecol	G_b2600	TP
+ecol	G_b3176	TP
+ecol	G_b1264	FN
+ecol	G_b0168	FN
+ecol	G_b1207	TP
+ecol	G_b0085	TP
+ecol	G_b0954	FN
 ecol	G_b0003	TP
-ecol	G_b4245	TP
-ecol	G_b0639	TP
-ecol	G_b0093	FN
+ecol	G_b0181	TP
 ecol	G_b0173	TP
-ecol	G_b0421	TP
-ecol	G_b4160	TP
-ecol	G_b2153	TP
-ecol	G_b2416	FN
-ecol	G_b0115	FN
-ecol	G_b3433	FN
+ecol	G_b1131	TP
+ecol	G_b0945	TP
+ecol	G_b0908	TP
+ecol	G_b3770	TP
+ecol	G_b4041	FN
+ecol	G_b0109	TP
+ecol	G_b3972	TP
+ecol	G_b1812	TP
+ecol	G_b0126	FN
+ecol	G_b2316	FN
+ecol	G_b0720	TP
+ecol	G_b3368	TP
+ecol	G_b3256	FN
+ecol	G_b2557	TP
+ecol	G_b2764	FN
+ecol	G_b2329	TP
+ecol	G_b0529	FN
+ecol	G_b3187	TP
+ecol	G_b0180	FN
+ecol	G_b2780	TP
+ecol	G_b1262	TP
+ecol	G_b3947	FN
 ecol	G_b3189	TP
+ecol	G_b2400	FN
+ecol	G_b1215	TP
+ecol	G_b1093	FN
+ecol	G_b0029	FN
+ecol	G_b1062	FN
+ecol	G_b4177	TP
 ecol	G_b0911	FN
-ecol	G_b2312	TP
-ecol	G_b2615	TP
-ecol	G_b0052	FN
-ecol	G_b0386	TP
-ecol	G_b0084	FN
-ecol	G_b2762	FN
-ecol	G_b3532	FN
-ecol	G_b2320	FN
-ecol	G_b2838	TP
-ecol	G_b3360	TP
+ecol	G_b1260	FN
+ecol	G_b3235	FN
+ecol	G_b0088	TP
+ecol	G_b0086	TP
+ecol	G_b1136	TP
 ecol	G_b3835	FN
-ecol	G_b1261	TP
-ecol	G_b4226	FN
-ecol	G_b3648	TP
-ecol	G_b0954	FN
-ecol	G_b0103	TP
-ecol	G_b0090	TP
+ecol	G_b3967	TP
+ecol	G_b3255	FN
+ecol	G_b2507	TP
+ecol	G_b1740	TP
+ecol	G_b3360	TP
+ecol	G_b2511	FN
 ecol	G_b2746	TP
-ecol	G_b0002	FN
-ecol	G_b2499	TP
-ecol	G_b2315	TP
-ecol	G_b3639	TP
-ecol	G_b1098	TP
-ecol	G_b2764	FN
-ecol	G_b2750	FN
-ecol	G_b1260	FN
-ecol	G_b2559	FN
-ecol	G_b3256	FN
-ecol	G_b1117	FN
-ecol	G_b0096	TP
-ecol	G_b3947	FN
-ecol	G_b0171	FN
-ecol	G_b0085	TP
-ecol	G_b2025	TP
-ecol	G_b3731	FN
-ecol	G_b2022	TP
+ecol	G_b0071	FN
 ecol	G_b0417	FN
-ecol	G_b2507	TP
-ecol	G_b2763	FN
-ecol	G_b0524	TP
-ecol	G_b0166	TP
-ecol	G_b0369	TP
-ecol	G_b3041	TP
-ecol	G_b2779	FN
-ecol	G_b3389	TP
-ecol	G_b4388	FN
-ecol	G_b0733	FN
-ecol	G_b3774	TP
-ecol	G_b3870	FN
-ecol	G_b2476	TP
+ecol	G_b4040	FN
 ecol	G_b3634	TP
-ecol	G_b1131	TP
-ecol	G_b3463	FN
+ecol	G_b2476	TP
+ecol	G_b3916	FN
+ecol	G_b0918	TP
+ecol	G_b0093	FN
 ecol	G_b0886	FN
-ecol	G_b2508	FN
 ecol	G_b1094	TP
-ecol	G_b0529	FN
-ecol	G_b0154	TP
-ecol	G_b0131	FN
-ecol	G_b2585	TP
-ecol	G_b3730	TP
-ecol	G_b1136	TP
-ecol	G_b3833	FN
-ecol	G_b0522	TP
-ecol	G_b0031	TP
 ecol	G_b0414	TP
-ecol	G_b2026	TP
-ecol	G_b0133	TP
-ecol	G_b2925	FN
-ecol	G_b0243	FN
-ecol	G_b2234	FN
-ecol	G_b0474	TP
-ecol	G_b3737	FN
-ecol	G_b3804	TP
-ecol	G_b1812	TP
-ecol	G_b2818	TP
-ecol	G_b3608	FN
-ecol	G_b0116	FN
-ecol	G_b1281	TP
-ecol	G_b3957	TP
+ecol	G_b0004	TP
+ecol	G_b0032	FN
+ecol	G_b0031	TP
 ecol	G_b3633	TP
-ecol	G_b0088	TP
-ecol	G_b2926	FN
-ecol	G_b0180	FN
-ecol	G_b0908	TP
-ecol	G_b1277	TP
-ecol	G_b2668	TN
-ecol	G_b0155	TN
-ecol	G_b4034	TN
-ecol	G_b0104	TN
-ecol	G_b3061	TN
-ecol	G_b0878	TN
-ecol	G_b4249	TN
-ecol	G_b0019	TN
-ecol	G_b2137	TN
-ecol	G_b2933	TN
-ecol	G_b2468	TN
-ecol	G_b4296	TN
-ecol	G_b0046	TN
-ecol	G_b2049	TN
-ecol	G_b1006	TN
-ecol	G_b0425	TN
-ecol	G_b3058	FP
-ecol	G_b2206	TN
-ecol	G_b0695	TN
-ecol	G_b3032	TN
-ecol	G_b2173	TN
-ecol	G_b0728	TN
-ecol	G_b2423	TN
-ecol	G_b0677	TN
-ecol	G_b0810	TN
-ecol	G_b1134	TN
-ecol	G_b1927	TN
+ecol	G_b0182	TP
+ecol	G_b3957	TP
+ecol	G_b2019	TP
+ecol	G_b2020	TP
+ecol	G_b3281	FN
+ecol	G_b3956	FN
+ecol	G_b3729	FN
+ecol	G_b4005	TP
+ecol	G_b2472	TP
+ecol	G_b2234	FN
+ecol	G_b2320	FN
+ecol	G_b1210	TP
+ecol	G_b2499	TP
+ecol	G_b2416	FN
+ecol	G_b4388	FN
+ecol	G_b3731	FN
+ecol	G_b2153	TP
+ecol	G_b0185	FN
+ecol	G_b2615	TP
+ecol	G_b0750	TP
+ecol	G_b3771	TP
+ecol	G_b3172	FN
+ecol	G_b1263	FN
+ecol	G_b1277	TP
+ecol	G_b2021	TP
+ecol	G_b0002	FN
+ecol	G_b0072	TP
+ecol	G_b0154	TP
+ecol	G_b0084	FN
+ecol	G_b3774	TP
+ecol	G_b1261	TP
+ecol	G_b3463	FN
+ecol	G_b3018	TP
+ecol	G_b1288	FN
+ecol	G_b2530	FN
+ecol	G_b0171	FN
+ecol	G_b3843	FN
+ecol	G_b2564	TP
+ecol	G_b0775	FN
+ecol	G_b0915	TP
+ecol	G_b3738	FN
+ecol	G_b2235	FN
+ecol	G_b1662	FN
+ecol	G_b0684	FN
+ecol	G_b2315	TP
+ecol	G_b4084	FN
+ecol	G_b0133	TP
+ecol	G_b3532	FN
+ecol	G_b0907	FN
+ecol	G_b2022	TP
+ecol	G_b2411	FN
+ecol	G_b0175	FN
+ecol	G_b4160	TP
+ecol	G_b2551	FN
+ecol	G_b3959	TP
+ecol	G_b1069	FN
+ecol	G_b3608	FN
+ecol	G_b2838	TP
+ecol	G_b3730	TP
+ecol	G_b0115	FN
+ecol	G_b2942	TP
+ecol	G_b0635	FN
+ecol	G_b0090	TP
+ecol	G_b2508	FN
+ecol	G_b2026	TP
+ecol	G_b2563	FN
+ecol	G_b3958	TP
+ecol	G_b0639	TP
+ecol	G_b2559	FN
+ecol	G_b2762	FN
+ecol	G_b3709	FN
+ecol	G_b0386	TP
+ecol	G_b0242	FN
+ecol	G_b1912	TP
+ecol	G_b3804	TP
+ecol	G_b0243	FN
+ecol	G_b3642	TP
+ecol	G_b2585	TP
+ecol	G_b4226	FN
+ecol	G_b3389	TP
+ecol	G_b0074	TP
+ecol	G_b1117	FN
+ecol	G_b2818	TP
+ecol	G_b0052	FN
+ecol	G_b0131	FN
+ecol	G_b2415	FN
+ecol	G_b2925	FN
+ecol	G_b0091	TP
+ecol	G_b3941	TP
+ecol	G_b3008	FN
+ecol	G_b2574	TP
+ecol	G_b3433	FN
+ecol	G_b3805	TP
+ecol	G_b2533	FN
+ecol	G_b0369	TP
+ecol	G_b3940	FN
+ecol	G_b0522	TP
+ecol	G_b3850	FN
+ecol	G_b3640	FN
+ecol	G_b2024	TP
+ecol	G_b0914	FN
+ecol	G_b0421	TP
+ecol	G_b1638	TP
+ecol	G_b0073	FN
+ecol	G_b0096	TP
+ecol	G_b4321	TN
+ecol	G_b4267	TN
+ecol	G_b1744	TN
+ecol	G_b2719	TN
+ecol	G_b0155	TN
+ecol	G_b0429	TN
+ecol	G_b1605	TN
+ecol	G_b2721	TN
+ecol	G_b2500	TN
+ecol	G_b3962	TN
+ecol	G_b1326	TN
+ecol	G_b4077	TN
+ecol	G_b2091	TN
+ecol	G_b1594	TN
+ecol	G_b3844	TN
+ecol	G_b1398	TN
+ecol	G_b1203	TN
 ecol	G_b0120	TN
-ecol	G_b0008	TN
-ecol	G_b2856	TN
-ecol	G_b3667	TN
-ecol	G_b0997	TN
-ecol	G_b1819	TN
-ecol	G_b4227	TN
-ecol	G_b3500	TN
-ecol	G_b3194	TN
-ecol	G_b3993	FP
-ecol	G_b3258	TN
-ecol	G_b3196	FP
-ecol	G_b3603	TN
-ecol	G_b2180	TN
-ecol	G_b2207	TN
-ecol	G_b3823	TN
-ecol	G_b3161	TN
-ecol	G_b0996	TN
-ecol	G_b0903	TN
-ecol	G_b2881	TN
-ecol	G_b3980	TN
-ecol	G_b0036	TN
-ecol	G_b2867	TN
-ecol	G_b2538	TN
-ecol	G_b3769	TN
-ecol	G_b3367	TN
-ecol	G_b2601	TN
-ecol	G_b1465	TN
-ecol	G_b3225	TN
-ecol	G_b4070	TN
-ecol	G_b3902	TN
-ecol	G_b2224	TN
-ecol	G_b1857	TN
-ecol	G_b0766	TN
-ecol	G_b2092	TN
-ecol	G_b2086	TN
-ecol	G_b3265	TN
-ecol	G_b4269	TN
-ecol	G_b2058	TN
-ecol	G_b3795	TN
-ecol	G_b2129	TN
-ecol	G_b2243	TN
-ecol	G_b0286	TN
-ecol	G_b2182	TN
-ecol	G_b3997	FP
-ecol	G_b2098	TN
-ecol	G_b3437	TN
-ecol	G_b2800	TN
-ecol	G_b3475	TN
-ecol	G_b3903	TN
-ecol	G_b3577	TN
-ecol	G_b3647	TN
-ecol	G_b1191	TN
-ecol	G_b0110	TN
+ecol	G_b2425	TN
+ecol	G_b0007	TN
+ecol	G_b1745	TN
+ecol	G_b3182	TN
+ecol	G_b2173	TN
+ecol	G_b3198	FP
+ecol	G_b3718	TN
+ecol	G_b1493	TN
+ecol	G_b0615	TN
+ecol	G_b0428	TN
+ecol	G_b0878	TN
+ecol	G_b4515	TN
+ecol	G_b1821	TN
+ecol	G_b0320	TN
+ecol	G_b0061	TN
 ecol	G_b0353	TN
-ecol	G_b1832	TN
-ecol	G_b3894	TN
-ecol	G_b1773	TN
-ecol	G_b2500	TN
-ecol	G_b1019	TN
-ecol	G_b0755	TN
-ecol	G_b0902	TN
-ecol	G_b0210	TN
+ecol	G_b2169	TN
+ecol	G_b2200	TN
+ecol	G_b2010	TN
 ecol	G_b3566	TN
-ecol	G_b3531	TN
-ecol	G_b3386	TN
+ecol	G_b4367	TN
+ecol	G_b2678	TN
+ecol	G_b3529	TN
+ecol	G_b0212	TN
+ecol	G_b1291	TN
+ecol	G_b2098	TN
+ecol	G_b3253	TN
+ecol	G_b0845	TN
+ecol	G_b0339	TN
+ecol	G_b1674	TN
+ecol	G_b3224	TN
+ecol	G_b0121	TN
+ecol	G_b3034	TN
+ecol	G_b0419	TN
+ecol	G_b2540	TN
+ecol	G_b1337	TN
+ecol	G_b0427	TN
+ecol	G_b3115	TN
+ecol	G_b2202	TN
+ecol	G_b1250	TN
+ecol	G_b1592	FP
+ecol	G_b3518	TN
+ecol	G_b4049	TN
+ecol	G_b2166	TN
+ecol	G_b1249	TN
+ecol	G_b2406	TN
 ecol	G_b0606	TN
-ecol	G_b3017	TN
-ecol	G_b0982	TN
-ecol	G_b2407	TN
-ecol	G_b2130	TN
+ecol	G_b0758	TN
+ecol	G_b0368	TN
+ecol	G_b3715	TN
+ecol	G_b3370	TN
+ecol	G_b0589	TN
+ecol	G_b4301	TN
 ecol	G_b0832	TN
-ecol	G_b1646	TN
-ecol	G_b0751	TN
-ecol	G_b0844	TN
-ecol	G_b0356	TN
-ecol	G_b1897	TN
-ecol	G_b2919	TN
-ecol	G_b0650	TN
-ecol	G_b1441	TN
-ecol	G_b2540	TN
-ecol	G_b2701	TN
-ecol	G_b2240	TN
-ecol	G_b2914	TN
-ecol	G_b0600	TN
-ecol	G_b2678	TN
-ecol	G_b2465	TN
-ecol	G_b3610	TN
-ecol	G_b3206	TN
-ecol	G_b4328	TN
-ecol	G_b4233	TN
-ecol	G_b0452	TN
-ecol	G_b0394	TN
-ecol	G_b1247	TN
-ecol	G_b0599	TN
-ecol	G_b3390	TN
-ecol	G_b0007	TN
-ecol	G_b1109	TN
-ecol	G_b0722	TN
-ecol	G_b0462	TN
-ecol	G_b3248	TN
-ecol	G_b3552	TN
-ecol	G_b0261	TN
-ecol	G_b0831	TN
-ecol	G_b3893	TN
-ecol	G_b2430	TN
-ecol	G_b0591	TN
-ecol	G_b3210	TN
-ecol	G_b4219	TN
-ecol	G_b0355	TN
-ecol	G_b2548	TN
-ecol	G_b2291	TN
-ecol	G_b1125	TN
-ecol	G_b0693	TN
-ecol	G_b2880	TN
-ecol	G_b4039	TN
-ecol	G_b1059	TN
-ecol	G_b2045	TN
-ecol	G_b3924	TN
-ecol	G_b2428	TN
-ecol	G_b0612	TN
-ecol	G_b1300	TN
-ecol	G_b4582	TN
-ecol	G_b3128	TN
-ecol	G_b2951	TN
-ecol	G_b0323	TN
-ecol	G_b1542	TN
-ecol	G_b3197	TN
-ecol	G_b2492	TN
-ecol	G_b0661	TN
-ecol	G_b4294	TN
-ecol	G_b0676	TN
-ecol	G_b2440	TN
+ecol	G_b0070	TN
+ecol	G_b2427	TN
+ecol	G_b3196	TN
+ecol	G_b3779	TN
+ecol	G_b2042	TN
+ecol	G_b3826	TN
+ecol	G_b1756	TN
+ecol	G_b3114	TN
+ecol	G_b4173	TN
+ecol	G_b1533	TN
+ecol	G_b2421	TN
+ecol	G_b3531	TN
+ecol	G_b2673	TN
+ecol	G_b1636	TN
+ecol	G_b2092	TN
+ecol	G_b2261	FP
+ecol	G_b4394	TN
+ecol	G_b3136	TN
+ecol	G_b3475	TN
+ecol	G_b3769	TN
+ecol	G_b2206	TN
+ecol	G_b0822	TN
+ecol	G_b1701	TN
+ecol	G_b1990	TN
+ecol	G_b1956	TN
+ecol	G_b4154	TN
+ecol	G_b3040	FP
+ecol	G_b3057	TN
+ecol	G_b0424	TN
+ecol	G_b2682	TN
+ecol	G_b2304	TN
+ecol	G_b1969	TN
+ecol	G_b1897	TN
+ecol	G_b3028	TN
+ecol	G_b2301	TN
+ecol	G_b3725	TN
+ecol	G_b3733	TN
 ecol	G_b2738	TN
-ecol	G_b1206	TN
-ecol	G_b0314	TN
-ecol	G_b3599	TN
-ecol	G_b0653	TN
-ecol	G_b0092	TN
-ecol	G_b0854	TN
-ecol	G_b1190	TN
-ecol	G_b2202	TN
-ecol	G_b1697	TN
+ecol	G_b1692	TN
+ecol	G_b1772	TN
+ecol	G_b2428	TN
+ecol	G_b2675	TN
+ecol	G_b0652	TN
 ecol	G_b4090	TN
-ecol	G_b0543	TN
-ecol	G_b2866	TN
-ecol	G_b1588	TN
-ecol	G_b4290	TN
-ecol	G_b0366	TN
-ecol	G_b1363	TN
-ecol	G_b0724	TN
-ecol	G_b0263	TN
-ecol	G_b0845	TN
-ecol	G_b3496	TN
+ecol	G_b1406	TN
+ecol	G_b1670	TN
+ecol	G_b2103	FP
+ecol	G_b3236	TN
+ecol	G_b3924	TN
+ecol	G_b2705	TN
+ecol	G_b1759	TN
+ecol	G_b0199	TN
+ecol	G_b0586	TN
+ecol	G_b0152	TN
+ecol	G_b4036	TN
+ecol	G_b0285	TN
 ecol	G_b4020	TN
-ecol	G_b0752	TN
-ecol	G_b1476	TN
-ecol	G_b4565	TN
+ecol	G_b1096	TN
+ecol	G_b2260	FP
+ecol	G_b2937	TN
+ecol	G_b0711	TN
+ecol	G_b2954	TN
+ecol	G_b0047	TN
+ecol	G_b1338	TN
+ecol	G_b2677	TN
+ecol	G_b1293	TN
+ecol	G_b3270	TN
+ecol	G_b2417	TN
+ecol	G_b4108	TN
+ecol	G_b0810	TN
+ecol	G_b4392	TN
+ecol	G_b0221	FP
+ecol	G_b0872	TN
 ecol	G_b2710	TN
-ecol	G_b0424	TN
-ecol	G_b2383	TN
-ecol	G_b4154	TN
-ecol	G_b4367	TN
-ecol	G_b0348	TN
-ecol	G_b4139	TN
-ecol	G_b0771	TN
-ecol	G_b3908	TN
-ecol	G_b1442	TN
-ecol	G_b4071	TN
-ecol	G_b2784	TN
-ecol	G_b3455	TN
-ecol	G_b2742	TN
-ecol	G_b2393	TN
-ecol	G_b1621	TN
-ecol	G_b1486	TN
+ecol	G_b1838	TN
+ecol	G_b2143	TN
+ecol	G_b0599	TN
+ecol	G_b0632	TN
+ecol	G_b3005	TN
+ecol	G_b1654	TN
+ecol	G_b0492	TN
+ecol	G_b0469	TN
+ecol	G_b0608	TN
+ecol	G_b0367	TN
+ecol	G_b3871	TN
+ecol	G_b0819	TN
+ecol	G_b4055	TN
+ecol	G_b4240	TN
+ecol	G_b4219	TN
+ecol	G_b0433	TN
+ecol	G_b4269	TN
+ecol	G_b1671	TN
+ecol	G_b1613	TN
+ecol	G_b3900	TN
+ecol	G_b0979	TN
+ecol	G_b0144	TN
+ecol	G_b1226	TN
+ecol	G_b1011	TN
+ecol	G_b0605	TN
 ecol	G_b2934	TN
-ecol	G_b3458	TN
-ecol	G_b2802	TN
-ecol	G_b1302	TN
-ecol	G_b2994	TN
-ecol	G_b1917	TN
-ecol	G_b1337	TN
-ecol	G_b2883	TN
-ecol	G_b4073	TN
-ecol	G_b4120	TN
-ecol	G_b1326	TN
-ecol	G_b3518	TN
-ecol	G_b0411	TN
-ecol	G_b4108	TN
-ecol	G_b0152	TN
-ecol	G_b1097	TN
-ecol	G_b2463	TN
-ecol	G_b0754	TN
-ecol	G_b4019	TN
-ecol	G_b4058	TN
-ecol	G_b1189	TN
+ecol	G_b1761	TN
+ecol	G_b3376	TN
+ecol	G_b0381	TN
+ecol	G_b3909	TN
+ecol	G_b2096	TN
+ecol	G_b1647	TN
+ecol	G_b3020	TN
 ecol	G_b2542	TN
-ecol	G_b1990	TN
-ecol	G_b4015	TN
-ecol	G_b1244	TN
-ecol	G_b2744	TN
-ecol	G_b1767	TN
-ecol	G_b3617	TN
-ecol	G_b2013	TN
-ecol	G_b0114	TN
-ecol	G_b0800	TN
-ecol	G_b2307	TN
-ecol	G_b0494	TN
-ecol	G_b0404	TN
-ecol	G_b0849	TN
-ecol	G_b2498	TN
-ecol	G_b3710	TN
-ecol	G_b0764	TN
-ecol	G_b2241	TN
-ecol	G_b3945	TN
-ecol	G_b3845	TN
-ecol	G_b4244	TN
-ecol	G_b2803	TN
-ecol	G_b2579	TN
-ecol	G_b1186	TN
-ecol	G_b3802	TN
-ecol	G_b2711	TN
-ecol	G_b4297	TN
-ecol	G_b3457	TN
-ecol	G_b2663	TN
-ecol	G_b3193	TN
-ecol	G_b0284	TN
-ecol	G_b3657	TN
-ecol	G_b1225	TN
-ecol	G_b1033	TN
-ecol	G_b2156	TN
-ecol	G_b2344	TN
-ecol	G_b2427	TN
-ecol	G_b0589	TN
-ecol	G_b3059	TN
-ecol	G_b0614	TN
-ecol	G_b0819	TN
-ecol	G_b1774	TN
-ecol	G_b1528	TN
-ecol	G_b1813	TN
-ecol	G_b2290	TN
-ecol	G_b3734	TN
-ecol	G_b1390	TN
-ecol	G_b3488	TN
-ecol	G_b3844	TN
-ecol	G_b0767	TN
-ecol	G_b1757	TN
-ecol	G_b2812	TN
-ecol	G_b4467	TN
-ecol	G_b1475	TN
+ecol	G_b2951	TN
+ecol	G_b0770	TN
+ecol	G_b1981	TN
+ecol	G_b4295	TN
+ecol	G_b0651	TN
+ecol	G_b2455	TN
+ecol	G_b3430	TN
+ecol	G_b4039	TN
+ecol	G_b1389	TN
+ecol	G_b1518	TN
+ecol	G_b1959	TN
+ecol	G_b2867	TN
+ecol	G_b1774	TN
+ecol	G_b0813	TN
+ecol	G_b2199	TN
+ecol	G_b4167	TN
+ecol	G_b0446	TN
+ecol	G_b2342	TN
+ecol	G_b2592	TN
+ecol	G_b2904	TN
 ecol	G_b0760	TN
-ecol	G_b1467	TN
-ecol	G_b3365	TN
-ecol	G_b4383	TN
-ecol	G_b1985	TN
-ecol	G_b2042	TN
-ecol	G_b3725	TN
-ecol	G_b0478	TN
-ecol	G_b3070	TN
-ecol	G_b3992	TN
-ecol	G_b3708	TN
-ecol	G_b0082	TN
-ecol	G_b3415	TN
-ecol	G_b0212	TN
-ecol	G_b2417	TN
-ecol	G_b1007	TN
-ecol	G_b4496	TN
-ecol	G_b2203	TN
-ecol	G_b0632	TN
-ecol	G_b4287	TN
-ecol	G_b0049	TN
-ecol	G_b1046	TN
-ecol	G_b3268	TN
-ecol	G_b4069	TN
-ecol	G_b2937	TN
-ecol	G_b0418	TN
-ecol	G_b0511	TN
-ecol	G_b1386	TN
-ecol	G_b0698	TN
-ecol	G_b2210	TN
+ecol	G_b3076	TN
+ecol	G_b1252	TN
+ecol	G_b0311	TN
+ecol	G_b1819	TN
+ecol	G_b1015	TN
+ecol	G_b2291	TN
+ecol	G_b0972	TN
+ecol	G_b2147	TN
+ecol	G_b0401	TN
+ecol	G_b1678	TN
+ecol	G_b2452	TN
+ecol	G_b1236	TN
+ecol	G_b2319	TN
+ecol	G_b1776	TN
+ecol	G_b2879	TN
+ecol	G_b2845	TN
+ecol	G_b3567	TN
+ecol	G_b2578	TN
+ecol	G_b1465	TN
+ecol	G_b2881	TN
+ecol	G_b0269	TN
+ecol	G_b3161	TN
+ecol	G_b0933	TN
 ecol	G_b4352	TN
-ecol	G_b3900	TN
-ecol	G_b3336	TN
-ecol	G_b1794	TN
-ecol	G_b0811	TN
-ecol	G_b3271	TN
-ecol	G_b2592	TN
-ecol	G_b3732	TN
+ecol	G_b1634	TN
+ecol	G_b0855	TN
+ecol	G_b0473	TN
+ecol	G_b0411	TN
+ecol	G_b2683	TN
+ecol	G_b0616	TN
+ecol	G_b2422	TN
+ecol	G_b0982	TN
+ecol	G_b2730	TN
+ecol	G_b1276	TN
+ecol	G_b4260	TN
+ecol	G_b1872	TN
+ecol	G_b1590	TN
+ecol	G_b2280	TN
+ecol	G_b3416	TN
+ecol	G_b0910	TN
 ecol	G_b4208	TN
-ecol	G_b0260	TN
-ecol	G_b3081	TN
-ecol	G_b1316	TN
-ecol	G_b1278	FP
-ecol	G_b3917	TN
-ecol	G_b4460	TN
-ecol	G_b3269	TN
-ecol	G_b2154	TN
-ecol	G_b0588	TN
-ecol	G_b2418	TN
-ecol	G_b1489	TN
-ecol	G_b2104	TN
-ecol	G_b2097	TN
+ecol	G_b4231	TN
 ecol	G_b2888	TN
-ecol	G_b1015	TN
-ecol	G_b0419	TN
-ecol	G_b4379	TN
-ecol	G_b0949	TN
-ecol	G_b2065	TN
-ecol	G_b3526	TN
-ecol	G_b1312	TN
-ecol	G_b1701	TN
-ecol	G_b3371	TN
-ecol	G_b4471	TN
-ecol	G_b2309	TN
-ecol	G_b3270	TN
-ecol	G_b0403	TN
-ecol	G_b1440	TN
-ecol	G_b4138	TN
-ecol	G_b0757	TN
-ecol	G_b3821	TN
-ecol	G_b0934	TN
-ecol	G_b4141	TN
-ecol	G_b2281	TN
-ecol	G_b0855	TN
-ecol	G_b0841	TN
-ecol	G_b3824	TN
-ecol	G_b3572	TN
-ecol	G_b0112	TN
-ecol	G_b0187	TN
-ecol	G_b2330	TN
-ecol	G_b3551	TN
-ecol	G_b2079	TN
-ecol	G_b1781	TN
-ecol	G_b3127	TN
-ecol	G_b3899	TN
-ecol	G_b2768	TN
-ecol	G_b1814	TN
-ecol	G_b3212	TN
-ecol	G_b2721	TN
-ecol	G_b3011	TN
-ecol	G_b4032	TN
-ecol	G_b3613	TN
-ecol	G_b0344	TN
-ecol	G_b2134	TN
-ecol	G_b2835	TN
-ecol	G_b2131	TN
-ecol	G_b0839	TN
+ecol	G_b0712	TN
+ecol	G_b1221	TN
+ecol	G_b3974	TN
 ecol	G_b0937	TN
-ecol	G_b2674	TN
-ecol	G_b1748	TN
-ecol	G_b3926	TN
-ecol	G_b1778	TN
-ecol	G_b3126	TN
-ecol	G_b0047	TN
-ecol	G_b4490	TN
-ecol	G_b1253	TN
-ecol	G_b2296	TN
-ecol	G_b3432	TN
-ecol	G_b0144	TN
-ecol	G_b2470	TN
-ecol	G_b4031	TN
-ecol	G_b3578	TN
-ecol	G_b1802	TN
-ecol	G_b4302	TN
-ecol	G_b3752	TN
-ecol	G_b3728	TN
-ecol	G_b3057	TN
-ecol	G_b3020	TN
-ecol	G_b0269	TN
-ecol	G_b3662	TN
-ecol	G_b3166	TN
-ecol	G_b0343	TN
-ecol	G_b2700	TN
-ecol	G_b4462	TN
-ecol	G_b3533	TN
-ecol	G_b0763	TN
-ecol	G_b4391	TN
-ecol	G_b1704	TN
-ecol	G_b2997	TN
-ecol	G_b0932	TN
-ecol	G_b1849	TN
-ecol	G_b1589	TN
-ecol	G_b2920	TN
-ecol	G_b2278	TN
-ecol	G_b1736	TN
-ecol	G_b1387	TN
-ecol	G_b3949	TN
-ecol	G_b3253	TN
-ecol	G_b4193	TN
-ecol	G_b2379	TN
-ecol	G_b1865	TN
-ecol	G_b0038	TN
-ecol	G_b3397	TN
-ecol	G_b1086	TN
-ecol	G_b2480	TN
-ecol	G_b1956	TN
-ecol	G_b2976	TN
-ecol	G_b4267	TN
-ecol	G_b2523	TN
-ecol	G_b0349	TN
-ecol	G_b3115	TN
-ecol	G_b0521	TN
-ecol	G_b1967	TN
-ecol	G_b2912	TN
-ecol	G_b0066	TN
-ecol	G_b2662	TN
-ecol	G_b4234	TN
-ecol	G_b2264	FP
-ecol	G_b4087	TN
-ecol	G_b3612	TN
-ecol	G_b2935	TN
-ecol	G_b3063	TN
+ecol	G_b3904	TN
+ecol	G_b3508	TN
+ecol	G_b0655	TN
+ecol	G_b2594	TN
+ecol	G_b0307	TN
+ecol	G_b2086	TN
+ecol	G_b2361	TN
+ecol	G_b4294	TN
+ecol	G_b3054	TN
+ecol	G_b2239	TN
+ecol	G_b1710	TN
 ecol	G_b3749	TN
-ecol	G_b3473	TN
-ecol	G_b2813	TN
-ecol	G_b2788	TN
-ecol	G_b4384	TN
-ecol	G_b0198	TN
-ecol	G_b0813	TN
-ecol	G_b1484	TN
-ecol	G_b2374	TN
-ecol	G_b4301	TN
-ecol	G_b3076	TN
-ecol	G_b3590	TN
-ecol	G_b1623	TN
+ecol	G_b4153	TN
+ecol	G_b0333	TN
+ecol	G_b3476	TN
+ecol	G_b1285	TN
+ecol	G_b3153	TN
+ecol	G_b4025	TN
+ecol	G_b0736	TN
+ecol	G_b0596	TN
 ecol	G_b4395	TN
-ecol	G_b3072	TN
-ecol	G_b3530	TN
-ecol	G_b2179	TN
-ecol	G_b1738	TN
-ecol	G_b1698	TN
-ecol	G_b1126	TN
-ecol	G_b0731	TN
-ecol	G_b3542	TN
-ecol	G_b1775	TN
-ecol	G_b3614	TN
-ecol	G_b1101	TN
-ecol	G_b2834	TN
-ecol	G_b3915	TN
-ecol	G_b3715	TN
-ecol	G_b1602	TN
-ecol	G_b3399	TN
-ecol	G_b4035	TN
-ecol	G_b4485	TN
-ecol	G_b1380	TN
-ecol	G_b0711	TN
-ecol	G_b2536	TN
-ecol	G_b3571	TN
-ecol	G_b0351	TN
-ecol	G_b1785	TN
-ecol	G_b2282	TN
-ecol	G_b2724	TN
-ecol	G_b1513	TN
-ecol	G_b4169	TN
-ecol	G_b0870	TN
-ecol	G_b2297	TN
-ecol	G_b3643	TN
-ecol	G_b2288	TN
-ecol	G_b0895	TN
-ecol	G_b2687	FP
-ecol	G_b2066	TN
-ecol	G_b0925	TN
-ecol	G_b2938	TN
-ecol	G_b0674	TN
-ecol	G_b2284	TN
-ecol	G_b0584	TN
-ecol	G_b1095	TN
-ecol	G_b2845	TN
-ecol	G_b2285	TN
-ecol	G_b2261	FP
-ecol	G_b0347	TN
 ecol	G_b2139	TN
-ecol	G_b1727	TN
-ecol	G_b2373	TN
-ecol	G_b2889	TN
-ecol	G_b3125	TN
-ecol	G_b2251	TN
-ecol	G_b3038	TN
-ecol	G_b0449	TN
-ecol	G_b2682	TN
-ecol	G_b2761	TN
-ecol	G_b1747	TN
-ecol	G_b4086	TN
-ecol	G_b4340	TN
-ecol	G_b2955	TN
-ecol	G_b0794	TN
-ecol	G_b0197	TN
-ecol	G_b3747	TN
-ecol	G_b0509	TN
-ecol	G_b1412	TN
-ecol	G_b0726	TN
-ecol	G_b1600	TN
-ecol	G_b2927	TN
-ecol	G_b4024	TN
-ecol	G_b0652	TN
-ecol	G_b0304	TN
-ecol	G_b1859	TN
-ecol	G_b4051	TN
-ecol	G_b1856	TN
-ecol	G_b2425	TN
-ecol	G_b1907	TN
-ecol	G_b1119	TN
-ecol	G_b0315	TN
-ecol	G_b1298	TN
-ecol	G_b0828	TN
-ecol	G_b0973	TN
-ecol	G_b2874	TN
-ecol	G_b3073	TN
-ecol	G_b0431	TN
-ecol	G_b2830	TN
-ecol	G_b1900	TN
-ecol	G_b3035	TN
-ecol	G_b2501	TN
-ecol	G_b2975	TN
-ecol	G_b1821	TN
-ecol	G_b2979	TN
-ecol	G_b4117	TN
-ecol	G_b4104	TN
-ecol	G_b3714	TN
-ecol	G_b3380	TN
-ecol	G_b1236	TN
-ecol	G_b0860	TN
-ecol	G_b2422	TN
-ecol	G_b3904	TN
-ecol	G_b1599	TN
-ecol	G_b1004	TN
-ecol	G_b1227	TN
-ecol	G_b3290	TN
-ecol	G_b1290	TN
-ecol	G_b3611	TN
-ecol	G_b0306	TN
-ecol	G_b2283	TN
-ecol	G_b4064	TN
-ecol	G_b0262	TN
-ecol	G_b1676	TN
-ecol	G_b2493	TN
-ecol	G_b3616	TN
-ecol	G_b3718	TN
-ecol	G_b1791	TN
-ecol	G_b1606	TN
-ecol	G_b1755	TN
+ecol	G_b3397	TN
+ecol	G_b4054	TN
+ecol	G_b4198	TN
+ecol	G_b4279	TN
+ecol	G_b0864	TN
+ecol	G_b2546	TN
+ecol	G_b0432	TN
+ecol	G_b1109	TN
+ecol	G_b2935	TN
+ecol	G_b3229	TN
+ecol	G_b0759	TN
+ecol	G_b2752	FP
+ecol	G_b0312	TN
+ecol	G_b1397	TN
+ecol	G_b0160	TN
+ecol	G_b1849	TN
+ecol	G_b0425	TN
+ecol	G_b2340	TN
+ecol	G_b3473	TN
+ecol	G_b3352	TN
+ecol	G_b2282	TN
+ecol	G_b3359	TN
+ecol	G_b2736	TN
+ecol	G_b0823	TN
+ecol	G_b1857	TN
 ecol	G_b2426	TN
-ecol	G_b4196	TN
-ecol	G_b1776	TN
-ecol	G_b2166	TN
-ecol	G_b0469	TN
-ecol	G_b0127	TN
-ecol	G_b4122	TN
-ecol	G_b2095	TN
-ecol	G_b3895	TN
-ecol	G_b2165	TN
-ecol	G_b1221	TN
-ecol	G_b0477	TN
-ecol	G_b1451	TN
-ecol	G_b1010	TN
-ecol	G_b1296	TN
-ecol	G_b0686	TN
-ecol	G_b2328	TN
-ecol	G_b3370	TN
-ecol	G_b2552	TN
-ecol	G_b0608	TN
+ecol	G_b0066	TN
+ecol	G_b1814	TN
+ecol	G_b3582	TN
+ecol	G_b0036	TN
+ecol	G_b3588	TN
+ecol	G_b3365	TN
+ecol	G_b4141	TN
+ecol	G_b1479	TN
+ecol	G_b0679	TN
+ecol	G_b3453	TN
+ecol	G_b1813	TN
+ecol	G_b4289	TN
+ecol	G_b1695	TN
 ecol	G_b1246	TN
-ecol	G_b1587	TN
-ecol	G_b2308	TN
-ecol	G_b3907	TN
-ecol	G_b3416	TN
-ecol	G_b1678	TN
-ecol	G_b0935	TN
-ecol	G_b1920	TN
-ecol	G_b2702	TN
-ecol	G_b0186	TN
-ecol	G_b0734	TN
-ecol	G_b3600	TN
-ecol	G_b0331	TN
-ecol	G_b2715	TN
-ecol	G_b2029	TN
-ecol	G_b0385	TN
-ecol	G_b3456	TN
-ecol	G_b2842	TN
-ecol	G_b4231	TN
-ecol	G_b0350	TN
-ecol	G_b3539	TN
-ecol	G_b0963	TN
-ecol	G_b2918	TN
-ecol	G_b0045	TN
-ecol	G_b3721	TN
-ecol	G_b3449	TN
-ecol	G_b1325	TN
-ecol	G_b2223	TN
-ecol	G_b0514	TN
-ecol	G_b0765	TN
-ecol	G_b3182	TN
-ecol	G_b3579	TN
-ecol	G_b3093	TN
-ecol	G_b3726	TN
-ecol	G_b3653	TN
-ecol	G_b4356	TN
+ecol	G_b1694	TN
+ecol	G_b2440	TN
+ecol	G_b3408	TN
+ecol	G_b0741	TN
+ecol	G_b2386	TN
 ecol	G_b3665	TN
-ecol	G_b1973	TN
+ecol	G_b2987	TN
+ecol	G_b1601	TN
 ecol	G_b0463	TN
+ecol	G_b0512	TN
+ecol	G_b2801	TN
+ecol	G_b3753	TN
+ecol	G_b2727	TN
+ecol	G_b0211	TN
+ecol	G_b1794	TN
+ecol	G_b2365	TN
+ecol	G_b1006	TN
+ecol	G_b1769	TN
+ecol	G_b4232	TN
+ecol	G_b0904	TN
+ecol	G_b0811	TN
+ecol	G_b2079	TN
+ecol	G_b0306	TN
+ecol	G_b4073	TN
+ecol	G_b1606	TN
+ecol	G_b0751	TN
+ecol	G_b1106	TN
+ecol	G_b0114	TN
+ecol	G_b0210	TN
+ecol	G_b1655	TN
+ecol	G_b2311	TN
+ecol	G_b2579	TN
+ecol	G_b3748	TN
+ecol	G_b3367	TN
+ecol	G_b0040	TN
+ecol	G_b3547	TN
+ecol	G_b4239	TN
+ecol	G_b1859	TN
+ecol	G_b1515	TN
+ecol	G_b2523	TN
+ecol	G_b4328	TN
+ecol	G_b0928	TN
+ecol	G_b3568	TN
+ecol	G_b2048	TN
+ecol	G_b0800	TN
+ecol	G_b3059	TN
+ecol	G_b3258	TN
+ecol	G_b2502	TN
+ecol	G_b2220	TN
 ecol	G_b0968	TN
+ecol	G_b2464	TN
+ecol	G_b1247	TN
+ecol	G_b2242	TN
 ecol	G_b1919	TN
-ecol	G_b2178	TN
-ecol	G_b3816	TN
-ecol	G_b0014	TN
-ecol	G_b2871	TN
-ecol	G_b0738	TN
-ecol	G_b3871	TN
-ecol	G_b0010	TN
-ecol	G_b3825	TN
-ecol	G_b1872	TN
-ecol	G_b1308	TN
-ecol	G_b2204	TN
-ecol	G_b1479	TN
-ecol	G_b1768	TN
-ecol	G_b0651	TN
-ecol	G_b2690	TN
-ecol	G_b0595	TN
-ecol	G_b4322	TN
-ecol	G_b1018	TN
-ecol	G_b0862	TN
-ecol	G_b3547	TN
-ecol	G_b3529	TN
-ecol	G_b1301	TN
-ecol	G_b2277	TN
-ecol	G_b3376	TN
-ecol	G_b3736	TN
-ecol	G_b1090	TN
-ecol	G_b1981	TN
-ecol	G_b3779	TN
-ecol	G_b0067	TN
-ecol	G_b2304	TN
-ecol	G_b2587	TN
-ecol	G_b3266	TN
-ecol	G_b1232	TN
-ecol	G_b1805	TN
-ecol	G_b2455	TN
-ecol	G_b2155	TN
-ecol	G_b4061	TN
-ecol	G_b1772	TN
-ecol	G_b3806	TN
-ecol	G_b3478	TN
-ecol	G_b2306	TN
+ecol	G_b1603	TN
+ecol	G_b0857	TN
+ecol	G_b4053	TN
+ecol	G_b2547	TN
+ecol	G_b3248	TN
+ecol	G_b1587	TN
+ecol	G_b0828	TN
+ecol	G_b4462	TN
+ecol	G_b3612	TN
+ecol	G_b2979	TN
+ecol	G_b3659	TN
+ecol	G_b3581	TN
+ecol	G_b1189	TN
+ecol	G_b1650	TN
+ecol	G_b2133	TN
+ecol	G_b3011	TN
+ecol	G_b0957	TN
+ecol	G_b0019	TN
+ecol	G_b1867	TN
+ecol	G_b3206	TN
 ecol	G_b1873	TN
-ecol	G_b1011	TN
-ecol	G_b3223	TN
-ecol	G_b0655	TN
-ecol	G_b0830	TN
+ecol	G_b2201	TN
+ecol	G_b0262	TN
+ecol	G_b0315	TN
+ecol	G_b0902	TN
+ecol	G_b3415	TN
+ecol	G_b1007	TN
+ecol	G_b0507	TN
 ecol	G_b3503	TN
-ecol	G_b2957	TN
-ecol	G_b3919	TN
-ecol	G_b1710	TN
-ecol	G_b1276	TN
-ecol	G_b4394	TN
-ecol	G_b3012	TN
-ecol	G_b2870	TN
-ecol	G_b1107	TN
-ecol	G_b0446	TN
-ecol	G_b0825	TN
-ecol	G_b4213	TN
-ecol	G_b2904	TN
-ecol	G_b3753	TN
-ecol	G_b4123	TN
-ecol	G_b3426	TN
-ecol	G_b0736	TN
-ecol	G_b4192	TN
-ecol	G_b2546	TN
-ecol	G_b2594	TN
-ecol	G_b3727	TN
-ecol	G_b1064	TN
-ecol	G_b0594	TN
-ecol	G_b0856	TN
-ecol	G_b3452	TN
-ecol	G_b1055	TN
-ecol	G_b0929	TN
-ecol	G_b3990	TN
-ecol	G_b2781	TN
-ecol	G_b0615	TN
-ecol	G_b3713	TN
-ecol	G_b2128	TN
-ecol	G_b2293	TN
-ecol	G_b1252	TN
-ecol	G_b2719	TN
-ecol	G_b0124	TN
-ecol	G_b3241	TN
-ecol	G_b1702	TN
-ecol	G_b3800	TN
-ecol	G_b0221	FP
-ecol	G_b1723	TN
-ecol	G_b0429	TN
-ecol	G_b2554	TN
-ecol	G_b4014	TN
-ecol	G_b4197	TN
-ecol	G_b2215	TN
-ecol	G_b2421	TN
+ecol	G_b4019	TN
+ecol	G_b4249	TN
+ecol	G_b2095	TN
+ecol	G_b1453	TN
+ecol	G_b2129	TN
+ecol	G_b1232	TN
+ecol	G_b2856	TN
+ecol	G_b0104	TN
+ecol	G_b1223	TN
+ecol	G_b3752	TN
+ecol	G_b2964	TN
+ecol	G_b4070	TN
+ecol	G_b2776	TN
+ecol	G_b0688	TN
+ecol	G_b0992	TN
+ecol	G_b2203	TN
+ecol	G_b2207	TN
+ecol	G_b2045	TN
+ecol	G_b1798	TN
+ecol	G_b2180	TN
+ecol	G_b0344	TN
+ecol	G_b1660	TN
+ecol	G_b1856	TN
 ecol	G_b2262	FP
-ecol	G_b1168	TN
-ecol	G_b3089	TN
-ecol	G_b3117	TN
-ecol	G_b2143	TN
-ecol	G_b4033	TN
-ecol	G_b1647	TN
-ecol	G_b4119	TN
-ecol	G_b2287	TN
+ecol	G_b3991	TN
+ecol	G_b0903	TN
+ecol	G_b0844	TN
+ecol	G_b4244	TN
+ecol	G_b2492	TN
+ecol	G_b2722	TN
+ecol	G_b3455	TN
+ecol	G_b2769	TN
+ecol	G_b1290	TN
+ecol	G_b0585	TN
+ecol	G_b3891	TN
+ecol	G_b2784	TN
+ecol	G_b2431	TN
+ecol	G_b2928	TN
+ecol	G_b3132	TN
+ecol	G_b0674	TN
+ecol	G_b2293	TN
+ecol	G_b4296	TN
+ecol	G_b1206	TN
+ecol	G_b0462	TN
+ecol	G_b1301	TN
+ecol	G_b0757	TN
+ecol	G_b0396	TN
+ecol	G_b0219	TN
+ecol	G_b1394	TN
+ecol	G_b3366	TN
+ecol	G_b0729	TN
+ecol	G_b2465	TN
+ecol	G_b3526	TN
+ecol	G_b2663	TN
+ecol	G_b3664	TN
+ecol	G_b0350	TN
+ecol	G_b4242	TN
+ecol	G_b2830	TN
+ecol	G_b3454	TN
+ecol	G_b0978	TN
+ecol	G_b0592	TN
+ecol	G_b0515	TN
+ecol	G_b2659	TN
+ecol	G_b2385	TN
+ecol	G_b2868	TN
+ecol	G_b3885	TN
+ecol	G_b3460	TN
+ecol	G_b2744	TN
+ecol	G_b1757	TN
+ecol	G_b3137	TN
+ecol	G_b0198	TN
+ecol	G_b0764	TN
+ecol	G_b2167	TN
+ecol	G_b4264	TN
+ecol	G_b2679	TN
+ecol	G_b3603	TN
+ecol	G_b0727	TN
+ecol	G_b2866	TN
+ecol	G_b1832	TN
+ecol	G_b1697	TN
+ecol	G_b2285	TN
+ecol	G_b1444	TN
+ecol	G_b4474	TN
+ecol	G_b4115	TN
+ecol	G_b3502	TN
+ecol	G_b1253	TN
 ecol	G_b1632	TN
+ecol	G_b0149	TN
+ecol	G_b4464	TN
+ecol	G_b0480	TN
+ecol	G_b0754	TN
+ecol	G_b0431	TN
+ecol	G_b1737	TN
+ecol	G_b0343	TN
+ecol	G_b0324	TN
+ecol	G_b0404	TN
+ecol	G_b0478	TN
+ecol	G_b2441	TN
+ecol	G_b2965	TN
+ecol	G_b3899	TN
+ecol	G_b2768	TN
+ecol	G_b4390	TN
+ecol	G_b1319	TN
+ecol	G_b2014	TN
+ecol	G_b3670	TN
+ecol	G_b0949	TN
+ecol	G_b1467	TN
 ecol	G_b2263	TN
-ecol	G_b1444	TN
-ecol	G_b4194	TN
-ecol	G_b3812	TN
-ecol	G_b1693	TN
-ecol	G_b0433	TN
-ecol	G_b1297	TN
-ecol	G_b0485	TN
-ecol	G_b0273	TN
-ecol	G_b2875	TN
-ecol	G_b0957	TN
-ecol	G_b0688	TN
-ecol	G_b3480	TN
-ecol	G_b0207	TN
-ecol	G_b2076	TN
-ecol	G_b4279	TN
-ecol	G_b3508	TN
-ecol	G_b2464	TN
-ecol	G_b0974	TN
-ecol	G_b0367	TN
-ecol	G_b1818	TN
-ecol	G_b4268	TN
-ecol	G_b0979	TN
-ecol	G_b2094	TN
-ecol	G_b3054	TN
-ecol	G_b3974	TN
-ecol	G_b1389	TN
-ecol	G_b2424	TN
-ecol	G_b2150	TN
-ecol	G_b1801	TN
+ecol	G_b0383	TN
 ecol	G_b2341	TN
-ecol	G_b4115	TN
-ecol	G_b2558	TN
-ecol	G_b1501	TN
-ecol	G_b2895	TN
-ecol	G_b3671	TN
-ecol	G_b0576	TN
-ecol	G_b2074	TN
-ecol	G_b4230	TN
-ecol	G_b1488	TN
-ecol	G_b1294	TN
-ecol	G_b1969	TN
-ecol	G_b1838	TN
-ecol	G_b0061	TN
-ecol	G_b0368	TN
-ecol	G_b0617	TN
-ecol	G_b3909	TN
-ecol	G_b3454	TN
-ecol	G_b0432	TN
-ecol	G_b4209	TN
-ecol	G_b2868	TN
-ecol	G_b0062	TN
-ecol	G_b3034	TN
-ecol	G_b2183	TN
-ecol	G_b0829	TN
-ecol	G_b1241	TN
-ecol	G_b1192	TN
-ecol	G_b3892	TN
-ecol	G_b1490	TN
-ecol	G_b1203	TN
-ecol	G_b2453	TN
-ecol	G_b0851	TN
-ecol	G_b0910	TN
-ecol	G_b0070	TN
-ecol	G_b0352	TN
-ecol	G_b1798	TN
-ecol	G_b1311	TN
-ecol	G_b2605	TN
-ecol	G_b3469	TN
-ecol	G_b3946	TN
-ecol	G_b3875	TN
-ecol	G_b3224	TN
+ecol	G_b3073	TN
+ecol	G_b2715	TN
+ecol	G_b0837	TN
+ecol	G_b0867	TN
+ecol	G_b3803	TN
+ecol	G_b3895	TN
+ecol	G_b1775	TN
+ecol	G_b1468	TN
+ecol	G_b1768	TN
 ecol	G_b1640	TN
-ecol	G_b2519	TN
-ecol	G_b3679	TN
-ecol	G_b4358	TN
-ecol	G_b2923	TN
-ecol	G_b2787	TN
-ecol	G_b3744	TN
-ecol	G_b4304	TN
-ecol	G_b2246	TN
-ecol	G_b4067	TN
-ecol	G_b3513	TN
-ecol	G_b3950	TN
-ecol	G_b0268	TN
-ecol	G_b4232	TN
-ecol	G_b2280	TN
-ecol	G_b0199	TN
-ecol	G_b1850	TN
-ecol	G_b3831	TN
-ecol	G_b2708	TN
-ecol	G_b1197	TN
+ecol	G_b3336	TN
+ecol	G_b1851	TN
+ecol	G_b1329	TN
+ecol	G_b1521	TN
+ecol	G_b3671	TN
 ecol	G_b2789	TN
-ecol	G_b0875	TN
-ecol	G_b3951	TN
-ecol	G_b4476	TN
-ecol	G_b1656	TN
-ecol	G_b2675	TN
-ecol	G_b2406	TN
-ecol	G_b1238	TN
-ecol	G_b0153	TN
-ecol	G_b0381	TN
-ecol	G_b2279	TN
-ecol	G_b3540	TN
-ecol	G_b0616	TN
-ecol	G_b0586	TN
-ecol	G_b2147	TN
-ecol	G_b1394	TN
-ecol	G_b1391	TN
-ecol	G_b0030	TN
-ecol	G_b4289	TN
-ecol	G_b1395	TN
-ecol	G_b3697	TN
-ecol	G_b4088	TN
-ecol	G_b1378	TN
-ecol	G_b1270	TN
-ecol	G_b4600	TN
+ecol	G_b3194	TN
+ecol	G_b2963	TN
+ecol	G_b0347	TN
+ecol	G_b4391	TN
+ecol	G_b3447	TN
+ecol	G_b2995	TN
+ecol	G_b0394	TN
+ecol	G_b2075	TN
+ecol	G_b0709	TN
+ecol	G_b0755	TN
+ecol	G_b2874	TN
+ecol	G_b4381	TN
+ecol	G_b0721	TN
+ecol	G_b1224	TN
+ecol	G_b3571	TN
+ecol	G_b2388	TN
+ecol	G_b0514	TN
 ecol	G_b2164	TN
-ecol	G_b4151	TN
-ecol	G_b2688	TN
-ecol	G_b4311	TN
-ecol	G_b1737	TN
-ecol	G_b2299	TN
-ecol	G_b3543	TN
-ecol	G_b1453	TN
-ecol	G_b2048	TN
-ecol	G_b3005	TN
-ecol	G_b0123	TN
-ecol	G_b0842	TN
-ecol	G_b0675	TN
-ecol	G_b3553	TN
-ecol	G_b2385	TN
-ecol	G_b3781	TN
-ecol	G_b1590	TN
-ecol	G_b2659	TN
-ecol	G_b3236	TN
-ecol	G_b0980	TN
-ecol	G_b1761	TN
+ecol	G_b2895	TN
+ecol	G_b4254	TN
+ecol	G_b0863	TN
+ecol	G_b2716	TN
+ecol	G_b1727	TN
+ecol	G_b0331	TN
+ecol	G_b2197	TN
+ecol	G_b3006	TN
+ecol	G_b0833	TN
+ecol	G_b2587	TN
+ecol	G_b2550	TN
+ecol	G_b1693	TN
+ecol	G_b3210	TN
+ecol	G_b2955	TN
+ecol	G_b3726	TN
+ecol	G_b3431	TN
+ecol	G_b2459	TN
+ecol	G_b1494	TN
+ecol	G_b2240	TN
 ecol	G_b1492	TN
-ecol	G_b2723	TN
-ecol	G_b1732	TN
-ecol	G_b2051	TN
-ecol	G_b2340	TN
-ecol	G_b0241	TN
-ecol	G_b1766	TN
-ecol	G_b2431	TN
-ecol	G_b2722	TN
-ecol	G_b2366	TN
-ecol	G_b0365	TN
-ecol	G_b2388	TN
-ecol	G_b1473	TN
-ecol	G_b2365	TN
-ecol	G_b3733	TN
-ecol	G_b3846	TN
-ecol	G_b1398	TN
-ecol	G_b1124	TN
+ecol	G_b2128	TN
+ecol	G_b0328	TN
+ecol	G_b0590	TN
+ecol	G_b0092	TN
+ecol	G_b3197	TN
+ecol	G_b2604	TN
 ecol	G_b2221	TN
-ecol	G_b0160	TN
-ecol	G_b1518	FP
-ecol	G_b3132	TN
-ecol	G_b0479	TN
-ecol	G_b4085	TN
-ecol	G_b0737	TN
-ecol	G_b2836	TN
-ecol	G_b2641	TN
-ecol	G_b1800	TN
-ecol	G_b0063	TN
-ecol	G_b1393	TN
-ecol	G_b2769	TN
-ecol	G_b1517	FP
-ecol	G_b1694	TN
-ecol	G_b1198	TN
+ecol	G_b3734	TN
+ecol	G_b1622	TN
+ecol	G_b0263	TN
+ecol	G_b4227	TN
+ecol	G_b2317	TN
+ecol	G_b1781	TN
+ecol	G_b3265	TN
+ecol	G_b2013	TN
+ecol	G_b2264	FP
+ecol	G_b0494	TN
+ecol	G_b2930	TN
+ecol	G_b2817	TN
+ecol	G_b0150	TN
+ecol	G_b2429	TN
+ecol	G_b3722	TN
+ecol	G_b2927	TN
+ecol	G_b3553	TN
 ecol	G_b1410	TN
-ecol	G_b0325	TN
-ecol	G_b2905	TN
-ecol	G_b2169	TN
-ecol	G_b2292	TN
-ecol	G_b0320	TN
-ecol	G_b4488	TN
-ecol	G_b2736	TN
-ecol	G_b2276	TN
-ecol	G_b4129	TN
-ecol	G_b3116	TN
-ecol	G_b0508	TN
-ecol	G_b2503	TN
-ecol	G_b1617	TN
+ecol	G_b3012	TN
+ecol	G_b2134	TN
+ecol	G_b2279	TN
+ecol	G_b3240	TN
+ecol	G_b3908	TN
+ecol	G_b2423	TN
+ecol	G_b3405	TN
+ecol	G_b0874	TN
+ecol	G_b1917	TN
+ecol	G_b2137	TN
+ecol	G_b0896	TN
+ecol	G_b2414	TN
+ecol	G_b0723	TN
+ecol	G_b0123	TN
+ecol	G_b0974	TN
+ecol	G_b1698	TN
+ecol	G_b2548	TN
+ecol	G_b2552	TN
+ecol	G_b3128	TN
+ecol	G_b2880	TN
+ecol	G_b0752	TN
+ecol	G_b1090	TN
+ecol	G_b4493	TN
+ecol	G_b1190	TN
+ecol	G_b1046	TN
+ecol	G_b3611	TN
+ecol	G_b1472	TN
+ecol	G_b0851	TN
+ecol	G_b1314	TN
+ecol	G_b4265	TN
+ecol	G_b0521	TN
 ecol	G_b0792	TN
-ecol	G_b4195	TN
-ecol	G_b2370	TN
-ecol	G_b2996	TN
-ecol	G_b2502	TN
-ecol	G_b0712	TN
-ecol	G_b3996	TN
-ecol	G_b0307	TN
-ecol	G_b4254	TN
-ecol	G_b1466	TN
-ecol	G_b1415	TN
-ecol	G_b4161	TN
-ecol	G_b0857	TN
-ecol	G_b4022	TN
-ecol	G_b2660	TN
-ecol	G_b3580	TN
-ecol	G_b0118	TN
-ecol	G_b1113	TN
-ecol	G_b0679	TN
-ecol	G_b1605	TN
-ecol	G_b1539	TN
-ecol	G_b3565	TN
-ecol	G_b1734	TN
-ecol	G_b3453	TN
-ecol	G_b1511	FP
-ecol	G_b0904	TN
-ecol	G_b2346	TN
-ecol	G_b0972	TN
-ecol	G_b2679	TN
-ecol	G_b1692	TN
-ecol	G_b1012	TN
-ecol	G_b1622	TN
-ecol	G_b3528	TN
-ecol	G_b2799	TN
+ecol	G_b4067	TN
+ecol	G_b3063	TN
+ecol	G_b0929	TN
+ecol	G_b2788	TN
+ecol	G_b3390	TN
+ecol	G_b3739	TN
+ecol	G_b2344	TN
+ecol	G_b0767	TN
+ecol	G_b0830	TN
+ecol	G_b2800	TN
+ecol	G_b3496	TN
+ecol	G_b1920	TN
+ecol	G_b2051	TN
+ecol	G_b1198	TN
+ecol	G_b2309	TN
+ecol	G_b1602	TN
+ecol	G_b2058	TN
+ecol	G_b0451	TN
+ecol	G_b0418	TN
+ecol	G_b3980	TN
+ecol	G_b3714	TN
+ecol	G_b0241	TN
+ecol	G_b0576	TN
+ecol	G_b1310	TN
+ecol	G_b0829	TN
+ecol	G_b2501	TN
+ecol	G_b2976	TN
+ecol	G_b3949	TN
+ecol	G_b3994	TN
+ecol	G_b3452	TN
+ecol	G_b3736	TN
+ecol	G_b1009	TN
+ecol	G_b4196	TN
+ecol	G_b3907	TN
+ecol	G_b1385	TN
+ecol	G_b0304	TN
+ecol	G_b4033	TN
+ecol	G_b0801	TN
+ecol	G_b2418	TN
+ecol	G_b3697	TN
+ecol	G_b1297	TN
 ecol	G_b0099	TN
-ecol	G_b2776	TN
-ecol	G_b0861	TN
-ecol	G_b3514	TN
-ecol	G_b0473	TN
-ecol	G_b2550	TN
-ecol	G_b3431	TN
-ecol	G_b1533	TN
-ecol	G_b1342	TN
-ecol	G_b4198	TN
-ecol	G_b0238	TN
-ecol	G_b0871	TN
-ecol	G_b4130	TN
-ecol	G_b4381	TN
-ecol	G_b1616	TN
-ecol	G_b1959	TN
-ecol	G_b1377	TN
+ecol	G_b3493	TN
+ecol	G_b0996	TN
+ecol	G_b3735	TN
+ecol	G_b2468	TN
+ecol	G_b2923	TN
+ecol	G_b0734	TN
 ecol	G_b3135	TN
-ecol	G_b1123	TN
-ecol	G_b2172	TN
-ecol	G_b3450	TN
-ecol	G_b1634	TN
-ecol	G_b3809	FP
-ecol	G_b1594	TN
-ecol	G_b2318	TN
-ecol	G_b3564	TN
+ecol	G_b1747	TN
+ecol	G_b0737	TN
+ecol	G_b3946	TN
+ecol	G_b4119	TN
+ecol	G_b4024	TN
+ecol	G_b2463	TN
+ecol	G_b0584	TN
+ecol	G_b3417	TN
+ecol	G_b2957	TN
+ecol	G_b4051	TN
+ecol	G_b0875	TN
+ecol	G_b1055	TN
+ecol	G_b3290	TN
+ecol	G_b1244	TN
+ecol	G_b3925	TN
+ecol	G_b1300	TN
+ecol	G_b3930	FP
+ecol	G_b1852	TN
+ecol	G_b1192	TN
+ecol	G_b1967	TN
+ecol	G_b4058	TN
+ecol	G_b3616	TN
+ecol	G_b2541	TN
+ecol	G_b0010	TN
 ecol	G_b4407	TN
-ecol	G_b2414	TN
-ecol	G_b1096	TN
-ecol	G_b0697	TN
-ecol	G_b0490	TN
-ecol	G_b1867	TN
-ecol	G_b1292	TN
-ecol	G_b4288	TN
-ecol	G_b3114	TN
-ecol	G_b1385	TN
-ecol	G_b0605	TN
-ecol	G_b2392	TN
-ecol	G_b2096	TN
-ecol	G_b3567	TN
-ecol	G_b4264	TN
-ecol	G_b2010	TN
-ecol	G_b2518	TN
-ecol	G_b1224	TN
-ecol	G_b0512	TN
-ecol	G_b0149	TN
-ecol	G_b0480	TN
-ecol	G_b0727	TN
-ecol	G_b3867	TN
-ecol	G_b0341	TN
-ecol	G_b3670	TN
-ecol	G_b2361	TN
-ecol	G_b0159	FP
-ecol	G_b0337	TN
+ecol	G_b3488	TN
+ecol	G_b3222	TN
+ecol	G_b2066	TN
+ecol	G_b3480	TN
+ecol	G_b3614	TN
 ecol	G_b3750	TN
-ecol	G_b3962	TN
-ecol	G_b2582	TN
-ecol	G_b1493	TN
-ecol	G_b2167	TN
-ecol	G_b2371	TN
-ecol	G_b0505	TN
-ecol	G_b1592	FP
-ecol	G_b4239	TN
-ecol	G_b1396	TN
-ecol	G_b3409	TN
-ecol	G_b0978	TN
-ecol	G_b0129	TN
-ecol	G_b0873	TN
-ecol	G_b2310	TN
-ecol	G_b3568	TN
-ecol	G_b3691	TN
-ecol	G_b0590	TN
-ecol	G_b1468	TN
-ecol	G_b0905	TN
-ecol	G_b3003	TN
-ecol	G_b0078	TN
-ecol	G_b4036	TN
-ecol	G_b1686	TN
-ecol	G_b3582	TN
-ecol	G_b1756	TN
-ecol	G_b2286	TN
-ecol	G_b0837	TN
-ecol	G_b1612	TN
-ecol	G_b1249	TN
-ecol	G_b2168	TN
-ecol	G_b2387	TN
-ecol	G_b0824	TN
-ecol	G_b3523	TN
-ecol	G_b0041	TN
-ecol	G_b2964	TN
-ecol	G_b3493	TN
-ecol	G_b2902	TN
-ecol	G_b1009	TN
-ecol	G_b2205	TN
-ecol	G_b0933	TN
-ecol	G_b1654	TN
-ecol	G_b3589	TN
-ecol	G_b4468	TN
-ecol	G_b0486	TN
+ecol	G_b1646	TN
+ecol	G_b0049	TN
+ecol	G_b2787	TN
+ecol	G_b0038	TN
+ecol	G_b3950	TN
+ecol	G_b1298	TN
+ecol	G_b3451	TN
+ecol	G_b3666	TN
+ecol	G_b0042	TN
+ecol	G_b1292	TN
+ecol	G_b1325	TN
+ecol	G_b1225	TN
+ecol	G_b1243	TN
+ecol	G_b4298	TN
+ecol	G_b4213	TN
+ecol	G_b0588	TN
 ecol	G_b1487	TN
-ecol	G_b3140	TN
-ecol	G_b1483	TN
-ecol	G_b3517	TN
-ecol	G_b2317	TN
-ecol	G_b3952	TN
-ecol	G_b4053	TN
-ecol	G_b0308	TN
-ecol	G_b3403	TN
-ecol	G_b2452	TN
-ecol	G_b3925	TN
-ecol	G_b2214	TN
-ecol	G_b3062	TN
-ecol	G_b0334	TN
-ecol	G_b2149	TN
-ecol	G_b2716	TN
-ecol	G_b1982	TN
-ecol	G_b3930	FP
-ecol	G_b1388	TN
-ecol	G_b2774	TN
-ecol	G_b0823	TN
-ecol	G_b0237	TN
-ecol	G_b2239	TN
-ecol	G_b1745	TN
-ecol	G_b0516	TN
-ecol	G_b3544	TN
-ecol	G_b4474	TN
-ecol	G_b2676	TN
-ecol	G_b3141	TN
-ecol	G_b2386	TN
-ecol	G_b3208	TN
-ecol	G_b1651	TN
-ecol	G_b0077	TN
-ecol	G_b0901	TN
-ecol	G_b2459	TN
-ecol	G_b3849	TN
-ecol	G_b2928	TN
-ecol	G_b3502	TN
-ecol	G_b2705	TN
-ecol	G_b1341	TN
-ecol	G_b3751	TN
-ecol	G_b2730	TN
-ecol	G_b1601	TN
-ecol	G_b2075	TN
-ecol	G_b4374	TN
-ecol	G_b2413	TN
-ecol	G_b1226	TN
-ecol	G_b0678	TN
-ecol	G_b0931	TN
-ecol	G_b4238	TN
-ecol	G_b3001	TN
-ecol	G_b2887	TN
-ecol	G_b0402	TN
-ecol	G_b2146	TN
-ecol	G_b1699	TN
-ecol	G_b2260	FP
-ecol	G_b2890	TN
-ecol	G_b2879	TN
-ecol	G_b1516	TN
-ecol	G_b3659	TN
-ecol	G_b0879	TN
-ecol	G_b3213	TN
-ecol	G_b4464	TN
-ecol	G_b2604	TN
-ecol	G_b2170	TN
-ecol	G_b0339	TN
-ecol	G_b1695	TN
-ecol	G_b3430	TN
-ecol	G_b2882	TN
-ecol	G_b0423	TN
-ecol	G_b2014	TN
-ecol	G_b3918	TN
-ecol	G_b4382	TN
-ecol	G_b0654	TN
-ecol	G_b1918	TN
-ecol	G_b4392	TN
-ecol	G_b1216	TN
-ecol	G_b3994	TN
-ecol	G_b1636	TN
-ecol	G_b0681	TN
-ecol	G_b2578	TN
-ecol	G_b3153	TN
-ecol	G_b1336	TN
-ecol	G_b0430	TN
-ecol	G_b1329	TN
-ecol	G_b0770	TN
-ecol	G_b3195	TN
-ecol	G_b1474	TN
-ecol	G_b2132	TN
-ecol	G_b0396	TN
-ecol	G_b2521	TN
-ecol	G_b4214	TN
-ecol	G_b1655	TN
-ecol	G_b3374	TN
-ecol	G_b3748	TN
-ecol	G_b1472	TN
-ecol	G_b0042	TN
-ecol	G_b0150	TN
-ecol	G_b1443	TN
+ecol	G_b2366	TN
+ecol	G_b0861	TN
+ecol	G_b4197	TN
+ecol	G_b3816	TN
+ecol	G_b2097	TN
+ecol	G_b1002	TN
+ecol	G_b2708	TN
+ecol	G_b1611	TN
+ecol	G_b3845	TN
+ecol	G_b0365	TN
+ecol	G_b1469	TN
 ecol	G_b2435	TN
-ecol	G_b2796	TN
-ecol	G_b0585	TN
-ecol	G_b1901	TN
-ecol	G_b0312	TN
-ecol	G_b0125	TN
-ecol	G_b0068	TN
-ecol	G_b2947	TN
-ecol	G_b0592	TN
-ecol	G_b4077	TN
-ecol	G_b1245	TN
-ecol	G_b0621	TN
-ecol	G_b0874	TN
-ecol	G_b3091	TN
-ecol	G_b0928	TN
-ecol	G_b2495	TN
-ecol	G_b3139	TN
-ecol	G_b1045	TN
-ecol	G_b0805	TN
+ecol	G_b3193	TN
+ecol	G_b1738	TN
+ecol	G_b1973	TN
+ecol	G_b4311	TN
+ecol	G_b1107	TN
+ecol	G_b1501	TN
+ecol	G_b3867	TN
+ecol	G_b3893	TN
+ecol	G_b4016	TN
+ecol	G_b4161	TN
+ecol	G_b3126	TN
+ecol	G_b1488	TN
+ecol	G_b2288	TN
+ecol	G_b3072	TN
+ecol	G_b3385	TN
 ecol	G_b2841	TN
-ecol	G_b0732	TN
-ecol	G_b4386	TN
-ecol	G_b3092	TN
-ecol	G_b2133	TN
-ecol	G_b1858	TN
-ecol	G_b3440	TN
-ecol	G_b0864	TN
+ecol	G_b2519	TN
+ecol	G_b2165	TN
+ecol	G_b3926	TN
+ecol	G_b2029	TN
+ecol	G_b1086	TN
+ecol	G_b0110	TN
+ecol	G_b0765	TN
+ecol	G_b1524	TN
+ecol	G_b0794	TN
+ecol	G_b2150	TN
+ecol	G_b2700	TN
+ecol	G_b1651	TN
 ecol	G_b3350	TN
-ecol	G_b3137	TN
-ecol	G_b0427	TN
-ecol	G_b0789	TN
-ecol	G_b0401	TN
+ecol	G_b4488	TN
+ecol	G_b1296	TN
+ecol	G_b4085	TN
+ecol	G_b2223	TN
+ecol	G_b1395	TN
+ecol	G_b1059	TN
 ecol	G_b1317	TN
-ecol	G_b1603	TN
-ecol	G_b3408	TN
-ecol	G_b1338	TN
-ecol	G_b1223	TN
-ecol	G_b3822	TN
-ecol	G_b1319	TN
-ecol	G_b0729	TN
-ecol	G_b0758	TN
-ecol	G_b2987	TN
-ecol	G_b1687	TN
-ecol	G_b3359	TN
-ecol	G_b1670	TN
-ecol	G_b2704	TN
-ecol	G_b1392	TN
-ecol	G_b4323	TN
-ecol	G_b2727	TN
-ecol	G_b1469	TN
-ecol	G_b3720	TN
-ecol	G_b2801	TN
-ecol	G_b0492	TN
-ecol	G_b1657	TN
-ecol	G_b2148	TN
-ecol	G_b3991	TN
-ecol	G_b1851	TN
-ecol	G_b3722	TN
-ecol	G_b4111	TN
-ecol	G_b3525	TN
-ecol	G_b0896	TN
-ecol	G_b2734	TN
-ecol	G_b2220	TN
-ecol	G_b1315	TN
-ecol	G_b3028	TN
-ecol	G_b1580	TN
-ecol	G_b0457	TN
-ecol	G_b0888	TN
-ecol	G_b2865	TN
-ecol	G_b1611	TN
-ecol	G_b2487	TN
-ecol	G_b0333	TN
-ecol	G_b1535	TN
-ecol	G_b0388	TN
-ecol	G_b3742	TN
-ecol	G_b3417	TN
-ecol	G_b1002	TN
-ecol	G_b1309	TN
-ecol	G_b2901	TN
-ecol	G_b2683	TN
-ecol	G_b3396	TN
-ecol	G_b3583	TN
-ecol	G_b1025	TN
-ecol	G_b4016	TN
-ecol	G_b0121	TN
-ecol	G_b0936	TN
-ecol	G_b0328	TN
-ecol	G_b3942	TN
-ecol	G_b0040	TN
-ecol	G_b1521	TN
-ecol	G_b4167	TN
-ecol	G_b3352	TN
-ecol	G_b1397	TN
-ecol	G_b4173	TN
-ecol	G_b2067	TN
-ecol	G_b0211	TN
-ecol	G_b2714	TN
-ecol	G_b2347	TN
-ecol	G_b2965	TN
-ecol	G_b2917	TN
-ecol	G_b4321	TN
-ecol	G_b3040	FP
-ecol	G_b3198	FP
+ecol	G_b1134	TN
+ecol	G_b3081	TN
+ecol	G_b3477	TN
+ecol	G_b2494	TN
+ecol	G_b4384	TN
+ecol	G_b4358	TN
+ecol	G_b1186	TN
+ecol	G_b3721	TN
+ecol	G_b1896	TN
+ecol	G_b2156	TN
+ecol	G_b1475	TN
+ecol	G_b0935	TN
+ecol	G_b3399	TN
+ecol	G_b4139	TN
+ecol	G_b0351	TN
+ecol	G_b0677	TN
+ecol	G_b0763	TN
+ecol	G_b3514	TN
 ecol	G_b2497	TN
-ecol	G_b2177	TN
-ecol	G_b3891	TN
-ecol	G_b3136	TN
-ecol	G_b1514	TN
-ecol	G_b3664	TN
-ecol	G_b3451	TN
-ecol	G_b2547	TN
-ecol	G_b2541	TN
-ecol	G_b0696	TN
-ecol	G_b0887	TN
-ecol	G_b3479	TN
+ecol	G_b0062	TN
+ecol	G_b0621	TN
+ecol	G_b3212	TN
+ecol	G_b2676	TN
+ecol	G_b1014	TN
+ecol	G_b3992	TN
+ecol	G_b3572	TN
+ecol	G_b4302	TN
+ecol	G_b3062	TN
+ecol	G_b3540	TN
+ecol	G_b1732	TN
+ecol	G_b0207	TN
+ecol	G_b2844	TN
+ecol	G_b3918	TN
+ecol	G_b0008	TN
+ecol	G_b0041	TN
+ecol	G_b4130	TN
+ecol	G_b0323	TN
+ecol	G_b0724	TN
+ecol	G_b4209	TN
+ecol	G_b0825	TN
+ecol	G_b4383	TN
+ecol	G_b3751	TN
+ecol	G_b2487	TN
+ecol	G_b4117	TN
+ecol	G_b3038	TN
+ecol	G_b4064	TN
 ecol	G_b3519	TN
-ecol	G_b0451	FP
-ecol	G_b4298	TN
-ecol	G_b2342	TN
-ecol	G_b3460	TN
-ecol	G_b1729	TN
-ecol	G_b3683	TN
-ecol	G_b2222	TN
-ecol	G_b2954	TN
-ecol	G_b1613	TN
-ecol	G_b3405	TN
-ecol	G_b3222	TN
-ecol	G_b2458	TN
-ecol	G_b4265	TN
-ecol	G_b1485	TN
-ecol	G_b0340	TN
-ecol	G_b2817	TN
-ecol	G_b4072	TN
-ecol	G_b0311	TN
-ecol	G_b3006	TN
-ecol	G_b1852	TN
-ecol	G_b4153	TN
-ecol	G_b4260	TN
-ecol	G_b0809	TN
-ecol	G_b0992	TN
-ecol	G_b2943	TN
-ecol	G_b2242	TN
-ecol	G_b0285	TN
-ecol	G_b3588	TN
-ecol	G_b3826	TN
-ecol	G_b2093	TN
-ecol	G_b0493	TN
-ecol	G_b0721	TN
-ecol	G_b3486	TN
-ecol	G_b2963	TN
-ecol	G_b2441	TN
-ecol	G_b4295	TN
-ecol	G_b2494	TN
-ecol	G_b0507	TN
-ecol	G_b0863	TN
+ecol	G_b0693	TN
+ecol	G_b2917	TN
+ecol	G_b1363	TN
+ecol	G_b2453	TN
+ecol	G_b0695	TN
+ecol	G_b2215	TN
+ecol	G_b3139	TN
+ecol	G_b0430	TN
+ecol	G_b2467	TN
+ecol	G_b0856	TN
+ecol	G_b2379	TN
+ecol	G_b1746	TN
+ecol	G_b3386	TN
+ecol	G_b3679	TN
+ecol	G_b4151	TN
+ecol	G_b3802	TN
+ecol	G_b2905	TN
+ecol	G_b3500	TN
+ecol	G_b1119	TN
+ecol	G_b2761	TN
 ecol	G_b4556	TN
-ecol	G_b3177	FP
-ecol	G_b2670	TN
-ecol	G_b0324	TN
-ecol	G_b4493	TN
-ecol	G_b1243	TN
-ecol	G_b4055	TN
-ecol	G_b2765	TN
-ecol	G_b2661	TN
-ecol	G_b1522	TN
-ecol	G_b0741	TN
-ecol	G_b0596	TN
-ecol	G_b3735	TN
-ecol	G_b1817	TN
-ecol	G_b2103	FP
-ecol	G_b3366	TN
-ecol	G_b1515	TN
-ecol	G_b2389	TN
-ecol	G_b1769	TN
-ecol	G_b0756	TN
-ecol	G_b0515	TN
-ecol	G_b0336	TN
-ecol	G_b2319	TN
-ecol	G_b1200	TN
-ecol	G_b0448	TN
-ecol	G_b0867	TN
-ecol	G_b4478	TN
-ecol	G_b1014	TN
-ecol	G_b1744	TN
-ecol	G_b2539	TN
-ecol	G_b4515	TN
-ecol	G_b1786	TN
-ecol	G_b3885	TN
-ecol	G_b2878	TN
-ecol	G_b2175	TN
-ecol	G_b3447	TN
+ecol	G_b0925	TN
+ecol	G_b1409	TN
+ecol	G_b0187	TN
+ecol	G_b2605	TN
+ecol	G_b0385	TN
+ecol	G_b3437	TN
+ecol	G_b4290	TN
+ecol	G_b0505	TN
+ecol	G_b2883	TN
+ecol	G_b1704	TN
+ecol	G_b2094	TN
+ecol	G_b3693	TN
 ecol	G_b3425	TN
-ecol	G_b0709	TN
-ecol	G_b0894	TN
-ecol	G_b4291	TN
-ecol	G_b0801	TN
-ecol	G_b2091	TN
-ecol	G_b2988	TN
-ecol	G_b1478	TN
-ecol	G_b1291	TN
-ecol	G_b4132	TN
-ecol	G_b1525	TN
-ecol	G_b4025	TN
-ecol	G_b0692	TN
-ecol	G_b1310	TN
-ecol	G_b2844	TN
+ecol	G_b3269	TN
+ecol	G_b0479	TN
+ecol	G_b1489	TN
+ecol	G_b3564	TN
+ecol	G_b1723	TN
+ecol	G_b3001	TN
+ecol	G_b3478	TN
+ecol	G_b1766	TN
+ecol	G_b1168	TN
 ecol	G_b3029	TN
-ecol	G_b1671	TN
-ecol	G_b2903	TN
-ecol	G_b2311	TN
-ecol	G_b4131	TN
-ecol	G_b4042	FP
-ecol	G_b2467	TN
-ecol	G_b4049	TN
-ecol	G_b1314	TN
-ecol	G_b1193	TN
-ecol	G_b0822	TN
-ecol	G_b1293	TN
-ecol	G_b1409	TN
-ecol	G_b4477	TN
-ecol	G_b1250	TN
-ecol	G_b4390	TN
-ecol	G_b0833	TN
-ecol	G_b2162	TN
-ecol	G_b0383	TN
-ecol	G_b2752	FP
-ecol	G_b3654	TN
-ecol	G_b1285	TN
-ecol	G_b1106	TN
-ecol	G_b0723	TN
-ecol	G_b2797	TN
+ecol	G_b0286	TN
+ecol	G_b1064	TN
+ecol	G_b0493	TN
+ecol	G_b2065	TN
+ecol	G_b2424	TN
+ecol	G_b3456	TN
 ecol	G_b3541	TN
-ecol	G_b1199	TN
-ecol	G_b0376	TN
-ecol	G_b3581	TN
-ecol	G_b4266	TN
-ecol	G_b1759	TN
-ecol	G_b1854	TN
-ecol	G_b3678	TN
-ecol	G_b2703	TN
-ecol	G_b1494	TN
-ecol	G_b1524	TN
-ecol	G_b3693	TN
-ecol	G_b3739	TN
-ecol	G_b2673	TN
-ecol	G_b2677	TN
-ecol	G_b3124	TN
-ecol	G_b4240	TN
-ecol	G_b2436	TN
-ecol	G_b3927	TN
-ecol	G_b2720	TN
-ecol	G_b3477	TN
+ecol	G_b1490	TN
+ecol	G_b2662	TN
+ecol	G_b2938	TN
+ecol	G_b2947	TN
+ecol	G_b3590	TN
+ecol	G_b3525	TN
+ecol	G_b3600	TN
+ecol	G_b0766	TN
+ecol	G_b1785	TN
+ecol	G_b0268	TN
+ecol	G_b1483	TN
+ecol	G_b3543	TN
+ecol	G_b1390	TN
+ecol	G_b0614	TN
+ecol	G_b1466	TN
+ecol	G_b1478	TN
+ecol	G_b0831	TN
+ecol	G_b2370	TN
+ecol	G_b2480	TN
+ecol	G_b2996	TN
+ecol	G_b0082	TN
+ecol	G_b1270	TN
+ecol	G_b3091	TN
+ecol	G_b0591	TN
+ecol	G_b0842	TN
+ecol	G_b4131	TN
+ecol	G_b2224	TN
+ecol	G_b3708	TN
+ecol	G_b2222	TN
+ecol	G_b3945	TN
+ecol	G_b4233	TN
+ecol	G_b3003	TN
+ecol	G_b2668	TN
+ecol	G_b2287	TN
+ecol	G_b3657	TN
 ecol	G_b4152	TN
-ecol	G_b3605	TN
-ecol	G_b4054	TN
-ecol	G_b3803	TN
-ecol	G_b4513	TN
-ecol	G_b2930	TN
-ecol	G_b0872	TN
-ecol	G_b2995	TN
-ecol	G_b1746	TN
-ecol	G_b3476	TN
-ecol	G_b0151	TN
-ecol	G_b4237	TN
-ecol	G_b1053	TN
-ecol	G_b0759	TN
-ecol	G_b0335	TN
-ecol	G_b4242	TN
-ecol	G_b2429	TN
-ecol	G_b3240	TN
-ecol	G_b3666	TN
-ecol	G_b1896	TN
-ecol	G_b2906	TN
+ecol	G_b0402	TN
+ecol	G_b0934	TN
+ecol	G_b2076	TN
+ecol	G_b0448	TN
+ecol	G_b3577	TN
+ecol	G_b3140	TN
+ecol	G_b3812	TN
+ecol	G_b1516	TN
+ecol	G_b2204	TN
+ecol	G_b3800	TN
+ecol	G_b4490	TN
+ecol	G_b0260	TN
+ecol	G_b1378	TN
+ecol	G_b1294	TN
+ecol	G_b0376	TN
+ecol	G_b3781	TN
+ecol	G_b2179	TN
 ecol	G_b3252	TN
-ecol	G_b1674	TN
-mgen	G_MG215	FN
-mgen	G_MG037	FN
-mgen	G_MG265	FN
-mgen	G_MG038	FN
-mgen	G_MG107	TP
-mgen	G_MG077	TP
-mgen	G_MG272	FN
-mgen	G_MG053	FN
-mgen	G_MG263	FN
-mgen	G_MG434	FN
-mgen	G_MG458	FN
-mgen	G_MG222	FN
-mgen	G_MG111	FN
-mgen	G_MG171	FN
-mgen	G_MG079	FN
-mgen	G_MG187	FN
-mgen	G_MG461	FN
-mgen	G_MG043	FN
-mgen	G_MG231	FN
-mgen	G_MG382	FN
-mgen	G_MG322	FN
-mgen	G_MG006	TP
-mgen	G_MG013	TP
-mgen	G_MG124	FN
-mgen	G_MG430	FN
-mgen	G_MG065	FN
-mgen	G_MG240	FN
-mgen	G_MG462	FN
-mgen	G_MG181	TP
-mgen	G_MG448	FN
-mgen	G_MG351	TP
-mgen	G_MG015	TP
-mgen	G_MG482	FN
-mgen	G_MG324	TP
-mgen	G_MG467	FN
-mgen	G_MG383	FN
-mgen	G_MG189	FN
-mgen	G_MG407	FN
-mgen	G_MG357	FN
-mgen	G_MG041	FN
-mgen	G_MG273	FN
-mgen	G_MG275	FN
-mgen	G_MG058	TP
-mgen	G_MG270	FN
-mgen	G_MG049	FN
-mgen	G_MG128	TP
-mgen	G_MG459	TP
-mgen	G_MG396	FN
-mgen	G_MG230	FN
-mgen	G_MG451	FN
-mgen	G_MG071	TP
-mgen	G_MG429	FN
-mgen	G_MG300	FN
-mgen	G_MG229	FN
-mgen	G_MG052	TP
-mgen	G_MG245	FN
-mgen	G_MG299	FN
-mgen	G_MG216	TP
-mgen	G_MG212	TP
-mgen	G_MG008	FN
-mgen	G_MG276	FN
-mgen	G_MG118	FN
-mgen	G_MG044	FN
-mgen	G_MG399	FN
-mgen	G_MG145	TP
-mgen	G_MG050	FN
-mgen	G_MG179	TP
-mgen	G_MG089	FN
-mgen	G_MG421	TP
-mgen	G_MG394	TP
-mgen	G_MG108	FN
-mgen	G_MG305	FN
-mgen	G_MG047	TP
-mgen	G_MG431	FN
-mgen	G_MG384	FN
-mgen	G_MG180	TP
-mgen	G_MG442	FN
-mgen	G_MG301	FN
-mgen	G_MG109	FN
-mgen	G_MG030	FN
-mgen	G_MG080	TP
-mgen	G_MG330	TP
-mgen	G_MG172	FN
-mgen	G_MG190	TP
-mgen	G_MG078	FN
-mgen	G_MG042	FN
-mgen	G_MG034	FN
-mgen	G_MG125	FN
-mgen	G_MG102	FN
-mgen	G_MG119	FN
-mgen	G_MG023	FN
-mgen	G_MG254	FN
-mgen	G_MG453	FN
-mgen	G_MG069	FN
-mgen	G_MG274	FN
-mgen	G_MG228	TP
-mgen	G_MG323	TP
-mgen	G_MG526	FN
-mgen	G_MG136	FN
-mgen	G_MG391	FN
-mgen	G_MG278	FN
-mgen	G_MG051	TN
-mgen	G_MG039	TN
-mgen	G_MG066	TN
-mgen	G_MG264	TN
-mgen	G_MG390	TN
-mgen	G_MG290	FP
-mgen	G_MG411	TN
-mgen	G_MG271	TN
-mgen	G_MG033	TN
-mgen	G_MG355	TN
-mgen	G_MG293	TN
-mgen	G_MG412	TN
-mgen	G_MG385	TN
-mgen	G_MG112	FP
-mgen	G_MG408	TN
-mgen	G_MG460	TN
-mgen	G_MG227	TN
-mgen	G_MG063	TN
-mgen	G_MG024	TN
-mgen	G_MG062	TN
-mgen	G_MG115	TN
-mgen	G_MG410	TN
-paer	G_PA3818	FN
-paer	G_PA1610	FN
-paer	G_PA1162	TP
-paer	G_PA4055	TP
-paer	G_PA3976	TP
-paer	G_PA0583	FN
-paer	G_PA0316	FN
-paer	G_PA5549	FN
-paer	G_PA1581	FN
-paer	G_PA4051	TP
-paer	G_PA4413	FN
-paer	G_PA0035	TP
-paer	G_PA4416	TP
-paer	G_PA5034	TP
-paer	G_PA4728	FN
-paer	G_PA2967	FN
-paer	G_PA0381	FN
-paer	G_PA1588	FN
-paer	G_PA5260	TP
-paer	G_PA3666	TP
-paer	G_PA4855	TP
-paer	G_PA0650	FN
-paer	G_PA0662	FN
-paer	G_PA5240	FN
-paer	G_PA5338	FN
-paer	G_PA0771	FN
-paer	G_PA0649	FN
-paer	G_PA4031	FN
-paer	G_PA0582	TP
-paer	G_PA3139	FN
-paer	G_PA3151	FN
-paer	G_PA1476	FN
-paer	G_PA5110	TP
-paer	G_PA4410	FN
-paer	G_PA4044	TP
-paer	G_PA2962	TP
-paer	G_PA4454	FN
-paer	G_PA0025	FN
-paer	G_PA3527	FN
-paer	G_PA3152	FN
-paer	G_PA2876	TP
-paer	G_PA4666	TP
-paer	G_PA4411	FN
-paer	G_PA0393	FN
-paer	G_PA1475	FN
-paer	G_PA4669	TP
-paer	G_PA4695	FN
-paer	G_PA4279	TP
-paer	G_PA5556	FN
-paer	G_PA3735	TP
-paer	G_PA4448	TP
-paer	G_PA1587	FN
-paer	G_PA0607	FN
-paer	G_PA5015	FN
-paer	G_PA4414	TP
-paer	G_PA3767	FN
-paer	G_PA1477	FN
-paer	G_PA0904	TP
-paer	G_PA0555	TP
-paer	G_PA5140	FN
-paer	G_PA1787	FN
-paer	G_PA1055	FN
-paer	G_PA3013	FN
-paer	G_PA3700	FN
-paer	G_PA4960	FN
-paer	G_PA4449	TP
-paer	G_PA5554	TP
-paer	G_PA4043	TP
-paer	G_PA0651	TP
-paer	G_PA1165	FN
-paer	G_PA4420	FN
-paer	G_PA1156	FN
-paer	G_PA4856	FN
-paer	G_PA1010	FN
-paer	G_PA5559	FN
-paer	G_PA4969	FN
-paer	G_PA5531	FN
-paer	G_PA2645	FN
-paer	G_PA2963	FN
-paer	G_PA5192	FN
-paer	G_PA1838	FN
-paer	G_PA5204	FN
-paer	G_PA0363	TP
-paer	G_PA0430	TP
-paer	G_PA3639	FN
-paer	G_PA4524	TP
-paer	G_PA0390	FN
-paer	G_PA0407	FN
-paer	G_PA4457	FN
-paer	G_PA4732	FN
-paer	G_PA5552	FN
-paer	G_PA5336	TP
-paer	G_PA3107	FN
-paer	G_PA0005	FN
-paer	G_PA1375	TP
-paer	G_PA4562	FN
-paer	G_PA5358	FN
-paer	G_PA2952	FN
-paer	G_PA4430	FN
-paer	G_PA2988	FN
-paer	G_PA4529	TP
-paer	G_PA4019	FN
-paer	G_PA1580	FN
-paer	G_PA3814	FN
-paer	G_PA5039	TP
-paer	G_PA4670	TP
-paer	G_PA2979	TP
-paer	G_PA0661	FN
-paer	G_PA4557	FN
-paer	G_PA5558	FN
-paer	G_PA5198	FN
-paer	G_PA5237	FN
-paer	G_PA3001	FN
-paer	G_PA3148	FN
-paer	G_PA0432	FN
-paer	G_PA3134	FN
-paer	G_PA3763	FN
-paer	G_PA4602	FN
-paer	G_PA3397	FN
-paer	G_PA3654	FN
-paer	G_PA1004	TP
-paer	G_PA1586	FN
-paer	G_PA3977	FN
-paer	G_PA5065	FN
-paer	G_PA4223	FN
-paer	G_PA4848	FN
-paer	G_PA3636	TP
-paer	G_PA3163	FN
-paer	G_PA0353	TP
-paer	G_PA3166	TP
-paer	G_PA5067	TP
-paer	G_PA4125	FN
-paer	G_PA3645	FN
-paer	G_PA5038	TP
-paer	G_PA5557	FN
-paer	G_PA3120	TP
-paer	G_PA4429	FN
-paer	G_PA0970	FN
-paer	G_PA5131	FN
-paer	G_PA5259	TP
-paer	G_PA0006	TP
-paer	G_PA1584	FN
-paer	G_PA4664	FN
-paer	G_PA5243	TP
-paer	G_PA4418	FN
-paer	G_PA1183	FN
-paer	G_PA5331	TP
-paer	G_PA5425	TP
-paer	G_PA4450	TP
-paer	G_PA1796	FN
-paer	G_PA3650	TP
-paer	G_PA4991	FN
-paer	G_PA5277	TP
-paer	G_PA0330	FN
-paer	G_PA2951	FN
-paer	G_PA4056	FN
-paer	G_PA2966	TP
-paer	G_PA4333	FN
-paer	G_PA3537	TP
-paer	G_PA3156	FN
-paer	G_PA4952	FN
-paer	G_PA4412	TP
-paer	G_PA3480	FN
-paer	G_PA3146	FN
-paer	G_PA4748	TP
-paer	G_PA0024	TP
-paer	G_PA0551	TP
-paer	G_PA3118	TP
-paer	G_PA3050	TP
-paer	G_PA0593	FN
-paer	G_PA4938	TP
-paer	G_PA0548	TP
-paer	G_PA4455	FN
-paer	G_PA4696	FN
-paer	G_PA5174	FN
-paer	G_PA3637	FN
-paer	G_PA0342	FN
-paer	G_PA5555	FN
-paer	G_PA2629	FN
-paer	G_PA2953	FN
-paer	G_PA4750	TP
-paer	G_PA5560	FN
-paer	G_PA1685	FN
-paer	G_PA4920	FN
-paer	G_PA0401	TP
-paer	G_PA4997	FN
-paer	G_PA4447	FN
-paer	G_PA3167	TP
-paer	G_PA3108	TP
-paer	G_PA0552	TP
-paer	G_PA1582	FN
-paer	G_PA4729	FN
-paer	G_PA1549	FN
-paer	G_PA4314	FN
-paer	G_PA1681	TP
-paer	G_PA3005	FN
-paer	G_PA4366	FN
-paer	G_PA1059	FN
-paer	G_PA3117	FN
-paer	G_PA0609	FN
-paer	G_PA4561	TP
-paer	G_PA3111	TP
-paer	G_PA1585	FN
-paer	G_PA4847	FN
-paer	G_PA4292	FN
-paer	G_PA0402	TP
-paer	G_PA5278	TP
-paer	G_PA3635	FN
-paer	G_PA2584	FN
-paer	G_PA4003	FN
-paer	G_PA3182	FN
-paer	G_PA3686	FN
-paer	G_PA0350	FN
-paer	G_PA3121	TP
-paer	G_PA3770	FN
-paer	G_PA3088	TP
-paer	G_PA4640	FN
-paer	G_PA5561	FN
-paer	G_PA1674	FN
-paer	G_PA4730	TP
-paer	G_PA1056	FN
-paer	G_PA4655	FN
-paer	G_PA3194	FN
-paer	G_PA2991	FN
-paer	G_PA1589	FN
-paer	G_PA2977	FN
-paer	G_PA5320	TP
-paer	G_PA0773	FN
-paer	G_PA4693	TP
-paer	G_PA3162	FN
-paer	G_PA1583	FN
-paer	G_PA4417	TP
-paer	G_PA1054	FN
-paer	G_PA5323	FN
-paer	G_PA4756	FN
-paer	G_PA5016	FN
-paer	G_PA3736	TP
-paer	G_PA3769	FN
-paer	G_PA4415	TP
-paer	G_PA4749	FN
-paer	G_PA3807	FN
-paer	G_PA1614	FN
-paer	G_PA1529	FN
-paer	G_PA4002	FN
-paer	G_PA4053	TP
-paer	G_PA5321	FN
-paer	G_PA1756	FN
-paer	G_PA0073	FN
-paer	G_PA1155	FN
-paer	G_PA4854	TP
-paer	G_PA5322	FN
-paer	G_PA3651	FN
-paer	G_PA4569	TP
-paer	G_PA4759	TP
-paer	G_PA0969	FN
-paer	G_PA2964	TP
-paer	G_PA1058	FN
-paer	G_PA5553	FN
-paer	G_PA4566	FN
-paer	G_PA4939	TP
-paer	G_PA4758	FN
-paer	G_PA3112	FN
-paer	G_PA1057	FN
-paer	G_PA3799	FN
-paer	G_PA4761	FN
-paer	G_PA4957	TP
-paer	G_PA4626	TN
-paer	G_PA4901	TN
-paer	G_PA1099	TN
-paer	G_PA3541	TN
-paer	G_PA2915	TN
-paer	G_PA0162	TN
-paer	G_PA2067	TN
-paer	G_PA5419	TN
-paer	G_PA4647	TN
-paer	G_PA3333	TN
-paer	G_PA2821	TN
-paer	G_PA0325	TN
-paer	G_PA2611	TN
-paer	G_PA5369	TN
-paer	G_PA1296	TN
-paer	G_PA0869	TN
-paer	G_PA0291	TN
-paer	G_PA5186	TN
-paer	G_PA5530	TN
-paer	G_PA4710	TN
-paer	G_PA4402	TN
-paer	G_PA1598	TN
-paer	G_PA1752	TN
-paer	G_PA5047	TN
-paer	G_PA3180	TN
-paer	G_PA4097	TN
-paer	G_PA2357	TN
-paer	G_PA1074	TN
-paer	G_PA4982	TN
-paer	G_PA2973	TN
-paer	G_PA1217	TN
-paer	G_PA3251	TN
-paer	G_PA0366	TN
-paer	G_PA5518	TN
-paer	G_PA5434	TN
-paer	G_PA3313	TN
-paer	G_PA4505	TN
-paer	G_PA4047	TN
-paer	G_PA1287	TN
-paer	G_PA0312	TN
-paer	G_PA3608	TN
-paer	G_PA2402	TN
-paer	G_PA2597	TN
-paer	G_PA0399	TN
-paer	G_PA3942	TN
-paer	G_PA3047	TN
-paer	G_PA3573	TN
-paer	G_PA1843	TN
-paer	G_PA0439	TN
-paer	G_PA3546	TN
-paer	G_PA4867	TN
-paer	G_PA0300	TN
-paer	G_PA1629	TN
-paer	G_PA1487	TN
-paer	G_PA3176	TN
-paer	G_PA2776	TN
-paer	G_PA5302	TN
-paer	G_PA4501	TN
-paer	G_PA1410	TN
-paer	G_PA0804	TN
-paer	G_PA2518	TN
-paer	G_PA2219	TN
-paer	G_PA5142	TN
-paer	G_PA0421	TN
-paer	G_PA2887	TN
-paer	G_PA0185	TN
-paer	G_PA4359	TN
-paer	G_PA1812	TN
-paer	G_PA3901	TN
-paer	G_PA2000	TN
-paer	G_PA0510	TN
-paer	G_PA2296	TN
-paer	G_PA3301	TN
-paer	G_PA3613	TN
-paer	G_PA4188	TN
-paer	G_PA0298	TN
-paer	G_PA3963	TN
-paer	G_PA2993	TN
-paer	G_PA1360	TN
-paer	G_PA1393	TN
-paer	G_PA2916	TN
-paer	G_PA2152	TN
-paer	G_PA0228	TN
-paer	G_PA4977	TN
-paer	G_PA2925	TN
-paer	G_PA0892	TN
-paer	G_PA0493	TN
-paer	G_PA0807	TN
-paer	G_PA3659	TN
-paer	G_PA4158	TN
-paer	G_PA5498	TN
-paer	G_PA5268	TN
-paer	G_PA0286	FP
-paer	G_PA2813	TN
-paer	G_PA5370	TN
-paer	G_PA1163	TN
-paer	G_PA1991	TN
-paer	G_PA4034	FP
-paer	G_PA1275	TN
-paer	G_PA2033	TN
-paer	G_PA5373	TN
-paer	G_PA0441	TN
-paer	G_PA2710	TN
-paer	G_PA0242	TN
-paer	G_PA3357	TN
-paer	G_PA0990	TN
-paer	G_PA0232	TN
-paer	G_PA5020	TN
-paer	G_PA4722	TN
-paer	G_PA0575	TN
-paer	G_PA3316	TN
-paer	G_PA4864	TN
-paer	G_PA1486	TN
-paer	G_PA0545	TN
-paer	G_PA0881	TN
-paer	G_PA4163	TN
-paer	G_PA2057	TN
-paer	G_PA3093	TN
-paer	G_PA0107	TN
-paer	G_PA1146	TN
-paer	G_PA0223	TN
-paer	G_PA3938	TN
-paer	G_PA5298	TN
-paer	G_PA1113	TN
-paer	G_PA1927	TN
-paer	G_PA1778	TN
-paer	G_PA1521	TN
-paer	G_PA2918	TN
-paer	G_PA5523	TN
-paer	G_PA5287	TN
-paer	G_PA1246	TN
-paer	G_PA1918	TN
-paer	G_PA2213	TN
-paer	G_PA4949	TN
-paer	G_PA0250	TN
-paer	G_PA5150	TN
-paer	G_PA5094	TN
-paer	G_PA3628	TN
-paer	G_PA3999	TN
-paer	G_PA5501	TN
-paer	G_PA2435	TN
-paer	G_PA0196	TN
-paer	G_PA1818	TN
-paer	G_PA3443	TN
-paer	G_PA1883	TN
-paer	G_PA2310	TN
-paer	G_PA3228	TN
-paer	G_PA5143	FP
-paer	G_PA4809	TN
-paer	G_PA0204	TN
-paer	G_PA4548	TN
-paer	G_PA2647	TN
-paer	G_PA0108	TN
-paer	G_PA1310	TN
-paer	G_PA4904	TN
-paer	G_PA4213	TN
-paer	G_PA2253	TN
-paer	G_PA0219	TN
-paer	G_PA4912	TN
-paer	G_PA0546	FP
-paer	G_PA2084	TN
-paer	G_PA0605	TN
-paer	G_PA2340	TN
-paer	G_PA3759	TN
-paer	G_PA3459	TN
-paer	G_PA1342	TN
-paer	G_PA2554	TN
-paer	G_PA3733	TN
-paer	G_PA3417	TN
-paer	G_PA1254	TN
-paer	G_PA3603	TN
-paer	G_PA5439	TN
-paer	G_PA1773	TN
-paer	G_PA0153	TN
-paer	G_PA1517	TN
-paer	G_PA0913	TN
-paer	G_PA1071	TN
-paer	G_PA3629	TN
-paer	G_PA0338	TN
-paer	G_PA0945	FP
-paer	G_PA3187	TN
-paer	G_PA3534	TN
-paer	G_PA3302	TN
-paer	G_PA0230	TN
-paer	G_PA1255	TN
-paer	G_PA0302	TN
-paer	G_PA2279	TN
-paer	G_PA3023	TN
-paer	G_PA1415	TN
-paer	G_PA2414	TN
-paer	G_PA2943	TN
-paer	G_PA0789	TN
-paer	G_PA2609	TN
-paer	G_PA2535	TN
-paer	G_PA4687	TN
-paer	G_PA3356	TN
-paer	G_PA2922	TN
-paer	G_PA0871	FP
-paer	G_PA0606	TN
-paer	G_PA4456	TN
-paer	G_PA1207	TN
-paer	G_PA2499	TN
-paer	G_PA4234	TN
-paer	G_PA0958	TN
-paer	G_PA2004	TN
-paer	G_PA3504	TN
-paer	G_PA2163	TN
-paer	G_PA5091	TN
-paer	G_PA4654	TN
-paer	G_PA2071	TN
-paer	G_PA5235	TN
-paer	G_PA0106	TN
-paer	G_PA1786	TN
-paer	G_PA0276	TN
-paer	G_PA1949	TN
-paer	G_PA3702	TN
-paer	G_PA4911	TN
-paer	G_PA0895	TN
-paer	G_PA0888	TN
-paer	G_PA2508	TN
-paer	G_PA4289	TN
-paer	G_PA0851	TN
-paer	G_PA1072	TN
-paer	G_PA4807	TN
-paer	G_PA3657	TN
-paer	G_PA4707	TN
-paer	G_PA5297	TN
-paer	G_PA4771	TN
-paer	G_PA2826	TN
-paer	G_PA5393	TN
-paer	G_PA5213	TN
-paer	G_PA4812	TN
-paer	G_PA2043	TN
-paer	G_PA4588	TN
-paer	G_PA0030	TN
-paer	G_PA0184	TN
-paer	G_PA1215	TN
-paer	G_PA0534	TN
-paer	G_PA0476	TN
-paer	G_PA3190	TN
-paer	G_PA5304	TN
-paer	G_PA2125	TN
-paer	G_PA5017	TN
-paer	G_PA2548	TN
-paer	G_PA1964	TN
-paer	G_PA4930	TN
-paer	G_PA3545	TN
-paer	G_PA3860	TN
-paer	G_PA1320	TN
-paer	G_PA2341	TN
-paer	G_PA1636	TN
-paer	G_PA0950	TN
-paer	G_PA3441	TN
-paer	G_PA2745	TN
-paer	G_PA1553	TN
-paer	G_PA4233	TN
-paer	G_PA0165	TN
-paer	G_PA4618	TN
-paer	G_PA3631	TN
-paer	G_PA2114	TN
-paer	G_PA0036	FP
-paer	G_PA1268	TN
-paer	G_PA2083	TN
-paer	G_PA3625	TN
-paer	G_PA0297	TN
-paer	G_PA2552	TN
-paer	G_PA3193	TN
-paer	G_PA4468	TN
-paer	G_PA2089	TN
-paer	G_PA5129	TN
-paer	G_PA4757	TN
-paer	G_PA4772	TN
-paer	G_PA4694	FP
-paer	G_PA0074	TN
-paer	G_PA2330	TN
-paer	G_PA2264	TN
-paer	G_PA2555	TN
-paer	G_PA5096	TN
-paer	G_PA5291	TN
-paer	G_PA2709	TN
-paer	G_PA5177	TN
-paer	G_PA2515	TN
-paer	G_PA0788	TN
-paer	G_PA2800	TN
-paer	G_PA1742	TN
-paer	G_PA0389	TN
-paer	G_PA3618	TN
-paer	G_PA3872	TN
-paer	G_PA2261	TN
-paer	G_PA4898	TN
-paer	G_PA0203	TN
-paer	G_PA2015	TN
+ecol	G_b1600	TN
+ecol	G_b4382	TN
+ecol	G_b3380	TN
+ecol	G_b1907	TN
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+ecol	G_b0336	TN
+ecol	G_b4266	TN
+ecol	G_b4230	TN
+ecol	G_b3409	TN
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+ecol	G_b0356	TN
+ecol	G_b2641	TN
+ecol	G_b2711	TN
+ecol	G_b1778	TN
+ecol	G_b1216	TN
+ecol	G_b1199	TN
+ecol	G_b0771	TN
+ecol	G_b1097	TN
+ecol	G_b2687	FP
+ecol	G_b3542	TN
+ecol	G_b3727	TN
+ecol	G_b4291	TN
+ecol	G_b3271	TN
+ecol	G_b2994	TN
+ecol	G_b1200	TN
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+ecol	G_b2889	TN
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+ecol	G_b4132	TN
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+ecol	G_b1687	TN
+ecol	G_b2283	TN
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+ecol	G_b3744	TN
+ecol	G_b3846	TN
+ecol	G_b2558	TN
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+ecol	G_b1010	TN
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+ecol	G_b0366	TN
+ecol	G_b3795	TN
+ecol	G_b0125	TN
+ecol	G_b2392	TN
+ecol	G_b0676	TN
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+ecol	G_b4069	TN
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+ecol	G_b0159	FP
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+ecol	G_b0349	TN
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+ecol	G_b0067	TN
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+ecol	G_b0486	TN
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+ecol	G_b2170	TN
+ecol	G_b2920	TN
+ecol	G_b4268	TN
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+ecol	G_b3371	TN
+ecol	G_b2836	TN
+ecol	G_b2470	TN
+ecol	G_b3875	TN
+ecol	G_b3223	TN
+ecol	G_b0612	TN
+ecol	G_b0728	TN
+ecol	G_b3268	TN
+ecol	G_b0617	TN
+ecol	G_b4234	TN
+ecol	G_b1485	TN
+ecol	G_b2723	TN
+ecol	G_b1676	TN
+ecol	G_b1985	TN
+ecol	G_b0457	TN
+ecol	G_b0237	TN
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+ecol	G_b2277	TN
+ecol	G_b0477	TN
+ecol	G_b1657	TN
+ecol	G_b1513	TN
+ecol	G_b2177	TN
+ecol	G_b0014	TN
+ecol	G_b0045	TN
+ecol	G_b3093	TN
+ecol	G_b1805	TN
+ecol	G_b4087	TN
+ecol	G_b4138	TN
+ecol	G_b1927	TN
+ecol	G_b3747	TN
+ecol	G_b3831	TN
+ecol	G_b3806	TN
+ecol	G_b0789	TN
+ecol	G_b2903	TN
+ecol	G_b1484	TN
+ecol	G_b2251	TN
+ecol	G_b2774	TN
+ecol	G_b4031	TN
+ecol	G_b1854	TN
+ecol	G_b1616	TN
+ecol	G_b0698	TN
+ecol	G_b0963	TN
+ecol	G_b0888	TN
+ecol	G_b2503	TN
+ecol	G_b3589	TN
+ecol	G_b2703	TN
+ecol	G_b2842	TN
+ecol	G_b2162	TN
+ecol	G_b0595	TN
+ecol	G_b2306	TN
+ecol	G_b1415	TN
+ecol	G_b0600	TN
+ecol	G_b1308	TN
+ecol	G_b2813	TN
+ecol	G_b1982	TN
+ecol	G_b2436	TN
+ecol	G_b0153	TN
+ecol	G_b0879	TN
+ecol	G_b1656	TN
+ecol	G_b2172	TN
+ecol	G_b1053	TN
+ecol	G_b1241	TN
+ecol	G_b3917	TN
+ecol	G_b2175	TN
+ecol	G_b3513	TN
+ecol	G_b3523	TN
+ecol	G_b0862	TN
+ecol	G_b3208	TN
+ecol	G_b4061	TN
+ecol	G_b0449	TN
+ecol	G_b3092	TN
+ecol	G_b1686	TN
+ecol	G_b2296	TN
+ecol	G_b3821	TN
+ecol	G_b3613	TN
+ecol	G_b0124	TN
+ecol	G_b0839	TN
+ecol	G_b0335	TN
+ecol	G_b2670	TN
+ecol	G_b0980	TN
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+ecol	G_b1918	TN
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+ecol	G_b1227	TN
+ecol	G_b4129	TN
+ecol	G_b2690	TN
+ecol	G_b2389	TN
+ecol	G_b1451	TN
+ecol	G_b2919	TN
+ecol	G_b0077	TN
+ecol	G_b4356	TN
+ecol	G_b0508	TN
+ecol	G_b3691	TN
+ecol	G_b0931	TN
+ecol	G_b0334	TN
+ecol	G_b4297	TN
+ecol	G_b1442	TN
+ecol	G_b1441	TN
+ecol	G_b4565	TN
+ecol	G_b1617	TN
+ecol	G_b3449	TN
+ecol	G_b1316	TN
+ecol	G_b3374	TN
+ecol	G_b0078	TN
+ecol	G_b3667	TN
+ecol	G_b4582	TN
+ecol	G_b2246	TN
+ecol	G_b3951	TN
+ecol	G_b4304	TN
+ecol	G_b3617	TN
+ecol	G_b2149	TN
+ecol	G_b2797	TN
+ecol	G_b1312	TN
+ecol	G_b3902	TN
+ecol	G_b2318	TN
+ecol	G_b2498	TN
+ecol	G_b0314	TN
+ecol	G_b0675	TN
+ecol	G_b1474	TN
+ecol	G_b3469	TN
+ecol	G_b3565	TN
+ecol	G_b1302	TN
+ecol	G_b2799	TN
+ecol	G_b3544	TN
+ecol	G_b3032	TN
+ecol	G_b3610	TN
+ecol	G_b0932	TN
+ecol	G_b2661	TN
+ecol	G_b1377	TN
+ecol	G_b1786	TN
+ecol	G_b3116	TN
+ecol	G_b3825	TN
+ecol	G_b2901	TN
+ecol	G_b1623	TN
+ecol	G_b4386	TN
+ecol	G_b4193	TN
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+ecol	G_b1018	TN
+ecol	G_b4237	TN
+ecol	G_b1278	FP
+ecol	G_b2292	TN
+ecol	G_b1588	TN
+ecol	G_b2734	TN
+ecol	G_b0352	TN
+ecol	G_b0860	TN
+ecol	G_b4288	TN
+ecol	G_b1125	TN
+ecol	G_b4169	TN
+ecol	G_b2933	TN
+ecol	G_b1729	TN
+ecol	G_b3728	TN
+ecol	G_b2371	TN
+ecol	G_b2198	TN
+ecol	G_b0973	TN
+ecol	G_b0063	TN
+ecol	G_b1690	TN
+ecol	G_b2346	TN
+ecol	G_b1858	TN
+ecol	G_b0423	TN
+ecol	G_b0887	TN
+ecol	G_b3225	TN
+ecol	G_b2132	TN
+ecol	G_b1197	TN
+ecol	G_b2739	TN
+ecol	G_b1387	TN
+ecol	G_b0403	TN
+ecol	G_b0543	TN
+ecol	G_b1993	TN
+ecol	G_b4035	TN
+ecol	G_b1124	TN
+ecol	G_b1045	TN
+ecol	G_b2835	TN
+ecol	G_b1126	TN
+ecol	G_b3458	TN
+ecol	G_b2104	TN
+ecol	G_b3720	TN
+ecol	G_b2347	TN
+ecol	G_b3997	FP
+ecol	G_b4496	TN
+ecol	G_b0388	TN
+ecol	G_b2276	TN
+ecol	G_b3942	TN
+ecol	G_b4042	FP
+ecol	G_spontaneous	FP
+ecol	G_b3396	TN
+ecol	G_b2049	TN
+ecol	G_b1699	TN
+ecol	G_b3061	TN
+ecol	G_b0756	TN
+ecol	G_b1755	TN
+ecol	G_b4485	TN
+ecol	G_b1901	TN
+ecol	G_b3177	FP
+ecol	G_b2724	TN
+ecol	G_b0894	TN
+ecol	G_b3517	TN
+ecol	G_b4323	TN
+ecol	G_b1802	TN
+ecol	G_b0697	TN
+ecol	G_b2154	TN
+ecol	G_b0238	TN
+ecol	G_b1599	TN
+ecol	G_b4374	TN
+ecol	G_b0452	TN
+ecol	G_b3849	TN
+ecol	G_b4322	TN
+ecol	G_b1123	TN
+ecol	G_b0824	TN
+ecol	G_b2183	TN
+ecol	G_b0151	TN
+ecol	G_b2182	TN
+ecol	G_b2290	TN
+ecol	G_b2148	TN
+ecol	G_b0284	TN
+ecol	G_b4471	TN
+ecol	G_b3653	TN
+ecol	G_b0841	TN
+ecol	G_b4104	TN
+ecol	G_b2407	TN
+ecol	G_b0341	TN
+ecol	G_b2284	TN
+ecol	G_b1621	TN
+ecol	G_b1393	TN
+ecol	G_b3058	FP
+ecol	G_b3583	TN
+ecol	G_b2245	TN
+ecol	G_b3124	TN
+ecol	G_b0186	TN
+ecol	G_b4468	TN
+ecol	G_b2871	TN
+ecol	G_b4478	TN
+ecol	G_b2146	TN
+ecol	G_b2702	TN
+ecol	G_b3643	TN
+ecol	G_b1342	TN
+ecol	G_b2742	TN
+ecol	G_b4088	TN
+ecol	G_b0686	TN
+ecol	G_b4034	TN
+ecol	G_b0678	TN
+ecol	G_b1191	TN
+ecol	G_b1033	TN
+ecol	G_b1025	TN
+ecol	G_b1525	TN
+ecol	G_b1311	TN
+ecol	G_b1238	TN
+ecol	G_b1850	TN
+ecol	G_b3450	TN
+ecol	G_b2887	TN
+ecol	G_b2178	TN
+ecol	G_b3713	TN
+ecol	G_b3166	TN
+ecol	G_b2328	TN
+ecol	G_b4214	TN
+ecol	G_b2988	TN
+ecol	G_b3710	TN
+ecol	G_b2912	TN
+ecol	G_b1336	TN
+ecol	G_b2554	TN
+ecol	G_b3579	TN
+ecol	G_b1473	TN
+ecol	G_b2688	TN
+ecol	G_b3432	TN
+ecol	G_b2870	TN
+ecol	G_b4071	TN
+ecol	G_b1791	TN
+ecol	G_b3915	TN
+ecol	G_b1522	TN
+ecol	G_b4379	TN
+ecol	G_b2131	TN
+ecol	G_b0854	TN
+ecol	G_b2458	TN
+ecol	G_b3892	TN
+ecol	G_b4238	TN
+ecol	G_b3824	TN
+ecol	G_b0905	TN
+ecol	G_b0692	TN
+ecol	G_b2130	TN
+ecol	G_b0594	TN
+ecol	G_b2660	TN
+ecol	G_b3479	TN
+ecol	G_b1773	TN
+ecol	G_b0732	TN
+ecol	G_b2906	TN
+ecol	G_b2720	TN
+ecol	G_b3952	TN
+ecol	G_b2299	TN
+ecol	G_b3195	TN
+ecol	G_b1443	TN
+ecol	G_b2536	TN
+ecol	G_b3539	TN
+ecol	G_b2812	TN
+ecol	G_b3990	TN
+ecol	G_b1113	TN
+ecol	G_b0726	TN
+ecol	G_b0997	TN
+ecol	G_b2674	TN
+ecol	G_b2539	TN
+ecol	G_b3823	TN
+ecol	G_b1539	TN
+ecol	G_b1341	TN
+ecol	G_b0901	TN
+ecol	G_b4195	TN
+ecol	G_b3599	TN
+ecol	G_b1388	TN
+ecol	G_b1412	TN
+ecol	G_b1476	TN
+ecol	G_b3070	TN
+ecol	G_b3017	TN
+ecol	G_b2521	TN
+ecol	G_b3533	TN
+ecol	G_b4111	TN
+ecol	G_b1193	TN
+ecol	G_b3426	TN
+ecol	G_b1245	TN
+ecol	G_b2413	TN
+ecol	G_b2278	TN
+ecol	G_b1580	TN
+ecol	G_b2601	TN
+ecol	G_b4513	TN
+ecol	G_b4022	TN
+ecol	G_b1865	TN
+ecol	G_b4192	TN
+ecol	G_b2902	TN
+ecol	G_b2168	TN
+ecol	G_b4120	TN
+ecol	G_b0809	TN
+ecol	G_b0261	TN
+ecol	G_b0490	TN
+ecol	G_b3530	TN
+ecol	G_b3662	TN
+ecol	G_b2214	TN
+ecol	G_b4032	TN
+ecol	G_b2765	TN
+ecol	G_b0068	TN
+ecol	G_b2714	TN
+ecol	G_b2210	TN
+ecol	G_b2781	TN
+ecol	G_b0273	TN
+ecol	G_b4122	TN
+ecol	G_b0650	TN
+ecol	G_b3241	TN
+ecol	G_b4460	TN
+ecol	G_b4600	TN
+ecol	G_b3266	TN
+ecol	G_b3125	TN
+ecol	G_b1012	TN
+ecol	G_b1767	TN
+ecol	G_b0681	TN
+ecol	G_b0509	TN
+ecol	G_b3903	TN
+ecol	G_b2803	TN
+ecol	G_b1589	TN
+ecol	G_b0653	TN
+ecol	G_b3551	TN
+ecol	G_b0895	TN
+ecol	G_b0849	TN
+ecol	G_b0696	TN
+ecol	G_b2307	TN
+ecol	G_b3732	TN
+ecol	G_b2882	TN
+ecol	G_b2493	TN
+ecol	G_b1514	TN
+ecol	G_b0340	TN
+ecol	G_b0127	TN
+ecol	G_b2243	TN
+ecol	G_b4467	TN
+ecol	G_b2865	TN
+ecol	G_b1736	TN
+ecol	G_b3678	TN
+ecol	G_b3403	TN
+ecol	G_b0738	TN
+ecol	G_b3440	TN
+ecol	G_b2918	TN
+ecol	G_b2155	TN
+ecol	G_b1396	TN
+ecol	G_b0046	TN
+ecol	G_b4086	TN
+ecol	G_b1818	TN
+ecol	G_b0654	TN
+ecol	G_b3580	TN
+ecol	G_b1535	TN
+ecol	G_b2330	TN
+ecol	G_b0308	TN
+ecol	G_b3919	TN
+ecol	G_b0870	TN
+ecol	G_b1392	TN
+ecol	G_b1702	TN
+ecol	G_b2374	TN
+ecol	G_b1391	TN
+ecol	G_b3647	TN
+ecol	G_b2975	TN
+ecol	G_b3089	TN
+ecol	G_b3822	TN
+ecol	G_b3528	TN
+ecol	G_b1019	TN
+ecol	G_b2582	TN
+ecol	G_b0118	TN
+ecol	G_b4015	TN
+ecol	G_b4194	TN
+ecol	G_b3894	TN
+ecol	G_b2281	TN
+ecol	G_b3605	TN
+ecol	G_b3683	TN
+ecol	G_b1004	TN
+ecol	G_b2834	TN
+ecol	G_b3578	TN
+ecol	G_b2093	TN
+ecol	G_b1380	TN
+ecol	G_b2878	TN
+ecol	G_b1900	TN
+ecol	G_b2840	TN
+ecol	G_b3552	TN
+ecol	G_b2802	TN
+ecol	G_b3927	TN
+ecol	G_b1517	TN
+ecol	G_b0485	TN
+ecol	G_b2538	TN
+ecol	G_b0337	TN
+ecol	G_b3654	TN
+ecol	G_b1486	TN
+ecol	G_b1386	TN
+ecol	G_b2297	TN
+ecol	G_b2943	TN
+ecol	G_b3457	TN
+ecol	G_b2383	TN
+ecol	G_b3486	TN
+ecol	G_b4014	TN
+ecol	G_b3141	TN
+ecol	G_b0805	TN
+ecol	G_b3996	TN
+ecol	G_b3127	TN
+ecol	G_b1440	TN
+ecol	G_b0936	TN
+ecol	G_b1612	TN
+ecol	G_b0722	TN
+ecol	G_b2286	TN
+ecol	G_b1101	TN
+ecol	G_b2704	TN
+ecol	G_b3117	TN
+ecol	G_b4072	TN
+ecol	G_b4340	TN
+ecol	G_b2393	TN
+ecol	G_b1511	TN
+ecol	G_b3993	FP
+ecol	G_b0871	TN
+ecol	G_b0731	TN
+ecol	G_b2701	TN
+ecol	G_b2205	TN
+ecol	G_b0030	TN
+ecol	G_b0197	TN
+ecol	G_b0355	TN
+ecol	G_b1817	TN
+ecol	G_b2241	TN
+ecol	G_b0661	TN
+ecol	G_b1309	TN
+ecol	G_b1748	TN
+ecol	G_b3809	FP
+ecol	G_b1095	TN
+ecol	G_b2997	TN
+ecol	G_b2875	TN
+ecol	G_b2914	TN
+ecol	G_b4287	TN
+ecol	G_b1528	TN
+mgen	G_MG089	FN
+mgen	G_MG322	FN
+mgen	G_MG222	FN
+mgen	G_MG052	TP
+mgen	G_MG030	FN
+mgen	G_MG190	TP
+mgen	G_MG109	FN
+mgen	G_MG240	FN
+mgen	G_MG118	FN
+mgen	G_MG212	TP
+mgen	G_MG265	FN
+mgen	G_MG179	TP
+mgen	G_MG047	TP
+mgen	G_MG263	FN
+mgen	G_MG442	FN
+mgen	G_MG034	FN
+mgen	G_MG069	FN
+mgen	G_MG037	FN
+mgen	G_MG407	TP
+mgen	G_MG383	FN
+mgen	G_MG299	TP
+mgen	G_MG077	TP
+mgen	G_MG526	FN
+mgen	G_MG085	FN
+mgen	G_MG434	FN
+mgen	G_MG273	FN
+mgen	G_MG453	FN
+mgen	G_MG071	TP
+mgen	G_MG254	FN
+mgen	G_MG430	TP
+mgen	G_MG300	TP
+mgen	G_MG078	FN
+mgen	G_MG399	FN
+mgen	G_MG274	FN
+mgen	G_MG125	FN
+mgen	G_MG171	FN
+mgen	G_MG323	TP
+mgen	G_MG136	FN
+mgen	G_MG058	TP
+mgen	G_MG482	FN
+mgen	G_MG041	FN
+mgen	G_MG172	FN
+mgen	G_MG108	FN
+mgen	G_MG394	TP
+mgen	G_MG013	TP
+mgen	G_MG324	TP
+mgen	G_MG080	TP
+mgen	G_MG119	FN
+mgen	G_MG050	FN
+mgen	G_MG467	FN
+mgen	G_MG181	TP
+mgen	G_MG053	FN
+mgen	G_MG351	TP
+mgen	G_MG462	FN
+mgen	G_MG042	FN
+mgen	G_MG384	FN
+mgen	G_MG245	FN
+mgen	G_MG429	FN
+mgen	G_MG231	FN
+mgen	G_MG128	TP
+mgen	G_MG124	FN
+mgen	G_MG102	FN
+mgen	G_MG187	FN
+mgen	G_MG015	TP
+mgen	G_MG448	FN
+mgen	G_MG229	FN
+mgen	G_MG008	FN
+mgen	G_MG079	FN
+mgen	G_MG431	FN
+mgen	G_MG270	FN
+mgen	G_MG107	TP
+mgen	G_MG391	FN
+mgen	G_MG230	FN
+mgen	G_MG215	FN
+mgen	G_MG023	FN
+mgen	G_MG305	FN
+mgen	G_MG458	FN
+mgen	G_MG330	TP
+mgen	G_MG421	TP
+mgen	G_MG396	FN
+mgen	G_MG189	FN
+mgen	G_MG382	FN
+mgen	G_MG228	TP
+mgen	G_MG276	FN
+mgen	G_MG180	TP
+mgen	G_MG044	FN
+mgen	G_MG278	FN
+mgen	G_MG275	FN
+mgen	G_MG043	FN
+mgen	G_MG459	TP
+mgen	G_MG111	FN
+mgen	G_MG301	TP
+mgen	G_MG216	TP
+mgen	G_MG038	FN
+mgen	G_MG006	TP
+mgen	G_MG272	FN
+mgen	G_MG461	FN
+mgen	G_MG065	FN
+mgen	G_MG451	FN
+mgen	G_MG145	TP
+mgen	G_MG049	FN
+mgen	G_MG357	TP
+mgen	G_MG033	TN
+mgen	G_MG408	TN
+mgen	G_MG390	TN
+mgen	G_MG051	TN
+mgen	G_MG410	TN
+mgen	G_MG385	TN
+mgen	G_MG062	TN
+mgen	G_MG112	TN
+mgen	G_MG293	TN
+mgen	G_MG412	TN
+mgen	G_MG024	TN
+mgen	G_MG039	TN
+mgen	G_MG355	TN
+mgen	G_MG227	TN
+mgen	G_MG066	TN
+mgen	G_MG271	TN
+mgen	G_MG460	TN
+mgen	G_MG411	TN
+mgen	G_MG290	FP
+mgen	G_MG063	TN
+mgen	G_MG264	TN
+mgen	G_MG115	TN
+paer	G_PA3769	FN
+paer	G_PA3397	FN
+paer	G_PA3163	FN
+paer	G_PA5237	FN
+paer	G_PA4292	FN
+paer	G_PA1476	FN
+paer	G_PA4729	FN
+paer	G_PA4019	FN
+paer	G_PA1004	TP
+paer	G_PA4003	FN
+paer	G_PA0609	FN
+paer	G_PA4856	FN
+paer	G_PA3527	FN
+paer	G_PA0649	FN
+paer	G_PA4053	TP
+paer	G_PA0551	TP
+paer	G_PA4847	FN
+paer	G_PA4411	FN
+paer	G_PA4669	TP
+paer	G_PA1756	FN
+paer	G_PA3151	FN
+paer	G_PA1056	FN
+paer	G_PA5322	FN
+paer	G_PA3666	TP
+paer	G_PA3134	FN
+paer	G_PA5555	FN
+paer	G_PA5552	FN
+paer	G_PA5015	FN
+paer	G_PA5559	FN
+paer	G_PA0350	FN
+paer	G_PA3005	FN
+paer	G_PA3480	FN
+paer	G_PA4051	TP
+paer	G_PA4223	FN
+paer	G_PA0390	FN
+paer	G_PA4418	FN
+paer	G_PA0024	FN
+paer	G_PA3111	TP
+paer	G_PA0006	TP
+paer	G_PA3537	TP
+paer	G_PA1610	FN
+paer	G_PA1183	FN
+paer	G_PA1581	FN
+paer	G_PA3637	FN
+paer	G_PA1059	FN
+paer	G_PA3167	TP
+paer	G_PA5034	TP
+paer	G_PA3799	FN
+paer	G_PA3194	FN
+paer	G_PA4414	TP
+paer	G_PA4450	TP
+paer	G_PA1165	FN
+paer	G_PA5549	FN
+paer	G_PA0353	TP
+paer	G_PA0430	TP
+paer	G_PA0970	FN
+paer	G_PA4279	TP
+paer	G_PA3107	FN
+paer	G_PA4557	FN
+paer	G_PA4569	TP
+paer	G_PA0552	TP
+paer	G_PA5556	FN
+paer	G_PA3651	FN
+paer	G_PA1054	FN
+paer	G_PA4413	FN
+paer	G_PA0025	FN
+paer	G_PA5260	TP
+paer	G_PA3156	FN
+paer	G_PA4044	TP
+paer	G_PA3152	FN
+paer	G_PA5531	FN
+paer	G_PA5039	TP
+paer	G_PA4756	FN
+paer	G_PA3807	FN
+paer	G_PA3654	FN
+paer	G_PA4449	TP
+paer	G_PA4750	TP
+paer	G_PA4938	TP
+paer	G_PA0402	TP
+paer	G_PA4939	TP
+paer	G_PA1674	FN
+paer	G_PA2584	FN
+paer	G_PA5259	TP
+paer	G_PA1010	FN
+paer	G_PA3735	TP
+paer	G_PA4031	FN
+paer	G_PA0582	TP
+paer	G_PA5140	FN
+paer	G_PA5558	FN
+paer	G_PA0651	TP
+paer	G_PA1589	FN
+paer	G_PA5204	FN
+paer	G_PA3767	FN
+paer	G_PA4664	FN
+paer	G_PA2629	FN
+paer	G_PA5240	FN
+paer	G_PA5557	FN
+paer	G_PA1583	FN
+paer	G_PA3121	TP
+paer	G_PA4761	FN
+paer	G_PA4457	FN
+paer	G_PA1057	FN
+paer	G_PA2645	FN
+paer	G_PA4957	TP
+paer	G_PA1156	FN
+paer	G_PA1838	FN
+paer	G_PA5174	FN
+paer	G_PA3976	TP
+paer	G_PA0432	FN
+paer	G_PA4758	FN
+paer	G_PA0607	FN
+paer	G_PA5198	FN
+paer	G_PA0593	FN
+paer	G_PA4997	FN
+paer	G_PA5321	FN
+paer	G_PA4695	FN
+paer	G_PA2966	TP
+paer	G_PA4002	FN
+paer	G_PA4855	TP
+paer	G_PA1614	FN
+paer	G_PA5065	FN
+paer	G_PA4969	FN
+paer	G_PA1162	TP
+paer	G_PA5038	TP
+paer	G_PA4447	FN
+paer	G_PA4759	TP
+paer	G_PA0073	FN
+paer	G_PA1584	FN
+paer	G_PA1587	FN
+paer	G_PA4420	FN
+paer	G_PA4749	FN
+paer	G_PA5553	FN
+paer	G_PA4055	TP
+paer	G_PA1582	FN
+paer	G_PA3770	FN
+paer	G_PA1549	FN
+paer	G_PA4640	FN
+paer	G_PA4430	FN
+paer	G_PA1055	FN
+paer	G_PA4693	TP
+paer	G_PA0342	FN
+paer	G_PA3162	FN
+paer	G_PA0773	FN
+paer	G_PA0316	FN
+paer	G_PA2963	FN
+paer	G_PA5243	TP
+paer	G_PA4602	FN
+paer	G_PA4417	TP
+paer	G_PA1529	FN
+paer	G_PA3814	FN
+paer	G_PA3166	TP
+paer	G_PA3139	FN
+paer	G_PA4056	FN
+paer	G_PA0363	TP
+paer	G_PA5323	FN
+paer	G_PA4670	TP
+paer	G_PA1477	FN
+paer	G_PA3650	TP
+paer	G_PA4730	TP
+paer	G_PA4566	FN
+paer	G_PA5560	FN
+paer	G_PA1475	FN
+paer	G_PA0771	FN
+paer	G_PA3977	FN
+paer	G_PA5554	FN
+paer	G_PA1685	FN
+paer	G_PA0035	TP
+paer	G_PA4920	FN
+paer	G_PA0650	FN
+paer	G_PA1681	TP
+paer	G_PA0401	TP
+paer	G_PA4561	TP
+paer	G_PA0005	FN
+paer	G_PA4529	TP
+paer	G_PA4125	FN
+paer	G_PA4448	TP
+paer	G_PA5192	FN
+paer	G_PA4416	TP
+paer	G_PA5067	TP
+paer	G_PA0381	FN
+paer	G_PA4696	FN
+paer	G_PA3108	TP
+paer	G_PA5331	TP
+paer	G_PA2977	FN
+paer	G_PA3120	TP
+paer	G_PA3645	FN
+paer	G_PA5320	TP
+paer	G_PA2962	TP
+paer	G_PA4991	FN
+paer	G_PA1058	FN
+paer	G_PA4410	FN
+paer	G_PA3088	TP
+paer	G_PA0662	FN
+paer	G_PA3013	FN
+paer	G_PA4412	TP
+paer	G_PA0407	FN
+paer	G_PA1796	FN
+paer	G_PA4666	TP
+paer	G_PA5016	FN
+paer	G_PA1588	FN
+paer	G_PA4732	FN
+paer	G_PA3117	FN
+paer	G_PA0330	FN
+paer	G_PA5278	TP
+paer	G_PA0555	TP
+paer	G_PA0583	FN
+paer	G_PA2967	FN
+paer	G_PA4854	TP
+paer	G_PA4748	TP
+paer	G_PA3118	TP
+paer	G_PA2876	TP
+paer	G_PA0661	FN
+paer	G_PA5561	FN
+paer	G_PA2951	FN
+paer	G_PA5277	TP
+paer	G_PA5338	FN
+paer	G_PA4333	FN
+paer	G_PA3636	TP
+paer	G_PA3001	FN
+paer	G_PA5358	FN
+paer	G_PA0393	FN
+paer	G_PA3050	TP
+paer	G_PA4524	TP
+paer	G_PA3635	FN
+paer	G_PA4848	FN
+paer	G_PA4728	FN
+paer	G_PA3736	TP
+paer	G_PA4952	FN
+paer	G_PA5336	TP
+paer	G_PA2952	FN
+paer	G_PA1586	FN
+paer	G_PA3146	FN
+paer	G_PA2953	FN
+paer	G_PA3639	FN
+paer	G_PA3686	FN
+paer	G_PA1787	FN
+paer	G_PA4043	TP
+paer	G_PA4366	FN
+paer	G_PA4314	FN
+paer	G_PA2991	FN
+paer	G_PA0969	FN
+paer	G_PA1580	FN
+paer	G_PA4655	FN
+paer	G_PA2964	TP
+paer	G_PA3818	FN
+paer	G_PA1585	FN
+paer	G_PA1375	TP
+paer	G_PA3112	FN
+paer	G_PA3700	FN
+paer	G_PA4429	FN
+paer	G_PA4960	FN
+paer	G_PA5131	FN
+paer	G_PA2988	FN
+paer	G_PA3182	FN
+paer	G_PA3148	FN
+paer	G_PA0548	TP
+paer	G_PA4415	TP
+paer	G_PA4455	FN
+paer	G_PA2979	TP
+paer	G_PA4454	FN
+paer	G_PA0904	TP
+paer	G_PA3763	FN
+paer	G_PA4562	FN
+paer	G_PA5425	TP
+paer	G_PA5110	TP
+paer	G_PA1155	FN
+paer	G_PA5241	TN
+paer	G_PA3183	TN
 paer	G_PA0374	TN
-paer	G_PA0304	TN
-paer	G_PA2803	TN
-paer	G_PA4404	TN
-paer	G_PA1862	TN
-paer	G_PA3304	TN
-paer	G_PA1902	TN
-paer	G_PA2327	TN
-paer	G_PA3584	TN
-paer	G_PA1750	TN
-paer	G_PA3589	TN
-paer	G_PA4434	TN
-paer	G_PA2644	TN
-paer	G_PA0935	TN
-paer	G_PA4464	TN
-paer	G_PA5181	TN
-paer	G_PA2516	TN
-paer	G_PA4183	TN
-paer	G_PA4098	TN
-paer	G_PA3925	TN
-paer	G_PA2390	TN
-paer	G_PA5398	TN
-paer	G_PA3296	TN
-paer	G_PA0761	TN
-paer	G_PA4974	TN
-paer	G_PA5505	TN
-paer	G_PA0387	TN
-paer	G_PA3873	TN
-paer	G_PA4892	TN
-paer	G_PA5468	TN
-paer	G_PA0495	TN
-paer	G_PA3933	TN
-paer	G_PA4733	TN
-paer	G_PA2507	TN
-paer	G_PA4150	TN
-paer	G_PA0496	TN
-paer	G_PA3970	TN
-paer	G_PA1813	TN
-paer	G_PA1409	TN
-paer	G_PA2994	TN
-paer	G_PA1144	TN
+paer	G_PA1516	TN
+paer	G_PA1758	FP
+paer	G_PA5387	TN
+paer	G_PA0314	TN
+paer	G_PA2643	TN
+paer	G_PA2648	TN
+paer	G_PA0431	TN
+paer	G_PA2015	TN
+paer	G_PA1514	TN
+paer	G_PA5084	TN
+paer	G_PA2748	TN
+paer	G_PA0589	TN
+paer	G_PA1729	TN
+paer	G_PA1488	TN
+paer	G_PA5419	TN
+paer	G_PA1944	TN
+paer	G_PA0654	TN
+paer	G_PA3186	TN
+paer	G_PA3935	TN
+paer	G_PA4883	TN
+paer	G_PA4367	TN
+paer	G_PA3544	TN
+paer	G_PA0282	TN
+paer	G_PA1462	FP
+paer	G_PA2786	TN
+paer	G_PA4904	TN
+paer	G_PA3092	TN
 paer	G_PA1647	TN
-paer	G_PA2777	TN
-paer	G_PA3673	TN
-paer	G_PA0944	TN
-paer	G_PA4329	TN
-paer	G_PA3268	TN
-paer	G_PA2322	TN
-paer	G_PA5372	TN
-paer	G_PA0103	TN
-paer	G_PA3300	TN
-paer	G_PA1737	TN
-paer	G_PA5242	TN
-paer	G_PA5500	TN
-paer	G_PA2890	TN
-paer	G_PA1562	TN
-paer	G_PA4195	TN
-paer	G_PA5188	TN
-paer	G_PA4078	TN
-paer	G_PA2203	TN
-paer	G_PA2517	TN
-paer	G_PA0247	TN
-paer	G_PA1417	TN
-paer	G_PA4064	TN
-paer	G_PA1288	TN
-paer	G_PA4981	TN
-paer	G_PA4212	TN
-paer	G_PA2998	TN
-paer	G_PA2557	TN
-paer	G_PA4122	TN
-paer	G_PA2533	TN
-paer	G_PA3903	TN
-paer	G_PA1634	TN
-paer	G_PA1258	TN
-paer	G_PA1537	TN
-paer	G_PA5385	TN
-paer	G_PA0129	TN
-paer	G_PA0581	TN
-paer	G_PA0322	TN
-paer	G_PA3551	TN
-paer	G_PA4160	TN
-paer	G_PA4339	TN
-paer	G_PA0240	TN
-paer	G_PA2252	TN
-paer	G_PA3328	TN
-paer	G_PA5511	TN
-paer	G_PA4645	TN
-paer	G_PA2339	TN
-paer	G_PA4228	TN
-paer	G_PA2111	TN
-paer	G_PA1783	TN
-paer	G_PA4467	TN
-paer	G_PA2352	TN
-paer	G_PA2249	TN
-paer	G_PA1462	TN
-paer	G_PA1221	TN
-paer	G_PA3797	TN
-paer	G_PA5411	TN
-paer	G_PA3250	TN
-paer	G_PA3119	TN
-paer	G_PA2392	TN
-paer	G_PA5426	FP
-paer	G_PA0136	TN
-paer	G_PA3315	TN
-paer	G_PA5368	TN
-paer	G_PA1317	TN
-paer	G_PA2711	TN
-paer	G_PA4355	TN
-paer	G_PA1543	TN
-paer	G_PA4153	TN
-paer	G_PA4788	TN
-paer	G_PA5378	TN
-paer	G_PA0199	TN
-paer	G_PA2025	TN
-paer	G_PA0195	TN
-paer	G_PA0603	TN
-paer	G_PA0324	TN
-paer	G_PA5379	TN
-paer	G_PA3511	TN
-paer	G_PA2278	TN
-paer	G_PA4503	TN
+paer	G_PA2341	TN
+paer	G_PA2938	TN
+paer	G_PA1061	TN
+paer	G_PA1099	TN
+paer	G_PA2390	TN
+paer	G_PA2442	TN
+paer	G_PA4662	FP
+paer	G_PA5429	TN
+paer	G_PA4812	TN
+paer	G_PA2346	TN
 paer	G_PA2596	TN
-paer	G_PA1932	TN
-paer	G_PA0597	TN
-paer	G_PA5249	TN
-paer	G_PA4143	TN
-paer	G_PA0849	TN
-paer	G_PA3068	TN
-paer	G_PA0166	TN
-paer	G_PA3633	FP
-paer	G_PA3116	TN
-paer	G_PA3929	TN
-paer	G_PA2393	TN
-paer	G_PA2124	TN
-paer	G_PA2550	TN
-paer	G_PA3755	TN
+paer	G_PA3840	TN
+paer	G_PA0932	TN
+paer	G_PA0530	TN
+paer	G_PA1629	TN
+paer	G_PA1321	TN
+paer	G_PA4626	TN
+paer	G_PA4598	TN
+paer	G_PA0745	FP
+paer	G_PA1626	TN
+paer	G_PA4047	TN
+paer	G_PA1311	TN
+paer	G_PA5155	TN
+paer	G_PA4339	TN
+paer	G_PA0154	TN
+paer	G_PA3758	TN
+paer	G_PA2195	TN
+paer	G_PA5369	TN
+paer	G_PA2998	TN
+paer	G_PA0232	TN
 paer	G_PA1966	TN
-paer	G_PA2494	TN
-paer	G_PA4393	TN
-paer	G_PA3415	TN
-paer	G_PA2217	TN
-paer	G_PA2040	TN
-paer	G_PA4029	TN
-paer	G_PA1683	TN
-paer	G_PA2165	TN
-paer	G_PA2680	TN
-paer	G_PA3831	TN
-paer	G_PA4792	TN
-paer	G_PA0282	TN
+paer	G_PA0789	TN
+paer	G_PA1296	TN
+paer	G_PA0281	TN
+paer	G_PA2204	TN
+paer	G_PA2925	TN
+paer	G_PA1862	TN
+paer	G_PA2958	TN
+paer	G_PA2639	TN
+paer	G_PA3534	TN
+paer	G_PA1001	TN
+paer	G_PA2343	TN
+paer	G_PA5248	TN
 paer	G_PA1873	TN
-paer	G_PA3544	TN
-paer	G_PA4475	TN
-paer	G_PA3236	TN
+paer	G_PA1616	TN
+paer	G_PA1565	TN
+paer	G_PA2827	TN
+paer	G_PA5142	TN
+paer	G_PA1833	TN
+paer	G_PA0606	TN
+paer	G_PA0476	TN
+paer	G_PA2637	TN
+paer	G_PA3797	TN
+paer	G_PA3538	TN
+paer	G_PA2052	TN
+paer	G_PA2402	TN
+paer	G_PA4542	FP
+paer	G_PA2266	TN
+paer	G_PA3128	TN
+paer	G_PA1008	TN
+paer	G_PA2940	TN
+paer	G_PA3633	FP
+paer	G_PA4092	TN
+paer	G_PA5487	TN
+paer	G_PA3193	TN
+paer	G_PA0473	TN
+paer	G_PA4148	TN
+paer	G_PA4466	TN
+paer	G_PA3472	TN
+paer	G_PA2900	TN
+paer	G_PA4907	TN
+paer	G_PA3749	TN
+paer	G_PA1376	TN
+paer	G_PA3305	TN
+paer	G_PA1127	TN
+paer	G_PA1415	TN
+paer	G_PA4903	TN
+paer	G_PA2199	TN
+paer	G_PA1417	TN
+paer	G_PA4943	TN
+paer	G_PA0113	TN
+paer	G_PA4037	TN
+paer	G_PA0832	TN
+paer	G_PA2515	TN
+paer	G_PA2232	TN
+paer	G_PA1174	TN
+paer	G_PA4825	TN
+paer	G_PA3418	TN
+paer	G_PA5111	TN
+paer	G_PA1051	TN
+paer	G_PA2042	TN
+paer	G_PA3625	TN
+paer	G_PA4397	TN
+paer	G_PA0389	TN
+paer	G_PA4974	TN
+paer	G_PA5171	TN
+paer	G_PA4496	TN
+paer	G_PA5399	TN
+paer	G_PA2162	TN
+paer	G_PA0658	TN
+paer	G_PA3506	TN
+paer	G_PA3180	TN
+paer	G_PA4628	TN
+paer	G_PA3223	TN
+paer	G_PA2013	TN
+paer	G_PA4458	FP
+paer	G_PA2310	TN
+paer	G_PA5373	TN
+paer	G_PA5394	TN
+paer	G_PA3751	TN
 paer	G_PA0438	TN
-paer	G_PA0283	TN
-paer	G_PA2159	TN
-paer	G_PA3083	TN
-paer	G_PA0754	TN
-paer	G_PA5473	TN
-paer	G_PA5375	TN
-paer	G_PA3862	FP
-paer	G_PA4015	TN
+paer	G_PA2624	TN
+paer	G_PA1523	TN
+paer	G_PA0372	TN
+paer	G_PA3173	TN
+paer	G_PA1806	TN
+paer	G_PA1310	TN
+paer	G_PA5511	TN
+paer	G_PA1861	TN
+paer	G_PA3189	TN
+paer	G_PA5410	TN
+paer	G_PA2745	TN
+paer	G_PA4121	TN
+paer	G_PA1507	TN
+paer	G_PA1246	TN
+paer	G_PA2307	TN
+paer	G_PA4719	TN
+paer	G_PA3364	TN
+paer	G_PA1496	TN
+paer	G_PA5411	TN
+paer	G_PA2517	TN
 paer	G_PA3792	TN
-paer	G_PA1326	TN
-paer	G_PA3295	TN
-paer	G_PA1946	TN
-paer	G_PA1863	TN
-paer	G_PA0371	TN
-paer	G_PA4353	TN
-paer	G_PA2328	TN
-paer	G_PA4903	TN
-paer	G_PA2914	TN
-paer	G_PA4973	TN
+paer	G_PA4757	TN
+paer	G_PA5021	TN
+paer	G_PA1074	TN
+paer	G_PA4706	TN
+paer	G_PA1119	TN
+paer	G_PA4159	TN
+paer	G_PA5013	TN
+paer	G_PA1556	TN
+paer	G_PA2247	TN
+paer	G_PA1543	TN
+paer	G_PA2192	TN
+paer	G_PA4912	TN
+paer	G_PA4171	TN
+paer	G_PA2144	TN
+paer	G_PA2057	TN
+paer	G_PA3187	TN
+paer	G_PA1634	TN
+paer	G_PA3362	TN
 paer	G_PA2563	TN
-paer	G_PA4980	TN
-paer	G_PA1311	TN
-paer	G_PA1833	TN
-paer	G_PA1993	TN
-paer	G_PA1499	TN
-paer	G_PA4889	TN
-paer	G_PA3888	TN
-paer	G_PA4473	TN
-paer	G_PA0794	FP
-paer	G_PA1325	TN
-paer	G_PA3279	TN
-paer	G_PA5228	TN
-paer	G_PA0747	TN
-paer	G_PA2265	TN
-paer	G_PA0205	TN
-paer	G_PA0314	TN
-paer	G_PA0887	TN
-paer	G_PA4811	TN
-paer	G_PA2870	TN
-paer	G_PA1518	TN
-paer	G_PA3394	TN
-paer	G_PA5084	TN
-paer	G_PA5442	TN
-paer	G_PA4072	TN
-paer	G_PA4001	TN
+paer	G_PA4442	TN
+paer	G_PA3602	TN
+paer	G_PA2039	TN
+paer	G_PA0581	TN
+paer	G_PA3901	TN
+paer	G_PA1027	TN
+paer	G_PA5213	TN
+paer	G_PA2664	TN
+paer	G_PA5297	TN
+paer	G_PA4673	TN
+paer	G_PA3615	TN
+paer	G_PA3597	TN
+paer	G_PA2023	TN
+paer	G_PA4212	TN
+paer	G_PA5215	TN
+paer	G_PA1260	TN
+paer	G_PA4687	TN
+paer	G_PA2148	TN
+paer	G_PA1491	TN
+paer	G_PA1143	TN
+paer	G_PA3837	TN
+paer	G_PA0164	TN
+paer	G_PA5292	TN
+paer	G_PA3890	TN
+paer	G_PA3702	TN
+paer	G_PA2647	TN
+paer	G_PA1070	TN
+paer	G_PA4478	TN
+paer	G_PA3954	TN
+paer	G_PA1017	TN
+paer	G_PA0195	TN
+paer	G_PA5207	TN
+paer	G_PA0753	TN
+paer	G_PA4331	TN
+paer	G_PA0140	TN
+paer	G_PA0276	TN
+paer	G_PA3236	TN
+paer	G_PA0917	TN
+paer	G_PA4158	TN
+paer	G_PA4805	TN
+paer	G_PA2033	TN
+paer	G_PA1146	TN
+paer	G_PA2352	TN
+paer	G_PA4708	TN
+paer	G_PA1222	TN
+paer	G_PA4456	TN
+paer	G_PA2508	TN
+paer	G_PA2767	TN
+paer	G_PA0219	TN
+paer	G_PA4444	TN
+paer	G_PA2067	TN
+paer	G_PA0304	TN
+paer	G_PA1828	TN
+paer	G_PA0871	FP
+paer	G_PA1596	TN
+paer	G_PA4646	TN
+paer	G_PA0196	TN
 paer	G_PA2001	TN
-paer	G_PA1635	TN
-paer	G_PA2329	TN
-paer	G_PA5216	TN
-paer	G_PA1338	TN
-paer	G_PA3739	TN
-paer	G_PA1556	TN
-paer	G_PA1001	TN
-paer	G_PA5410	TN
-paer	G_PA0229	TN
-paer	G_PA3863	TN
-paer	G_PA1173	TN
-paer	G_PA2683	TN
-paer	G_PA2142	TN
-paer	G_PA4397	TN
-paer	G_PA4510	TN
-paer	G_PA0954	TN
-paer	G_PA1984	TN
-paer	G_PA4544	TN
-paer	G_PA3838	TN
-paer	G_PA2023	TN
-paer	G_PA2053	TN
-paer	G_PA1809	TN
-paer	G_PA0241	TN
-paer	G_PA5376	TN
-paer	G_PA0352	TN
-paer	G_PA5281	TN
-paer	G_PA2642	TN
-paer	G_PA1500	TN
-paer	G_PA3641	TN
-paer	G_PA2765	TN
-paer	G_PA2268	TN
-paer	G_PA4975	TN
-paer	G_PA1507	TN
-paer	G_PA4913	TN
-paer	G_PA1727	TN
-paer	G_PA2100	TN
-paer	G_PA4502	TN
-paer	G_PA2396	TN
+paer	G_PA4475	TN
+paer	G_PA0023	TN
+paer	G_PA4917	TN
+paer	G_PA2891	TN
+paer	G_PA0881	TN
+paer	G_PA3504	TN
+paer	G_PA0496	TN
+paer	G_PA4113	TN
+paer	G_PA2465	TN
+paer	G_PA0783	TN
+paer	G_PA3592	TN
+paer	G_PA5135	TN
+paer	G_PA3563	TN
+paer	G_PA3713	TN
+paer	G_PA1947	TN
+paer	G_PA3755	TN
+paer	G_PA2040	TN
+paer	G_PA5495	TN
+paer	G_PA2275	TN
+paer	G_PA0162	TN
 paer	G_PA2298	TN
-paer	G_PA5309	TN
-paer	G_PA1971	TN
-paer	G_PA4431	TN
+paer	G_PA3872	TN
+paer	G_PA0810	TN
+paer	G_PA3641	TN
+paer	G_PA1557	TN
+paer	G_PA2813	TN
+paer	G_PA0733	TN
+paer	G_PA0241	TN
+paer	G_PA4710	TN
+paer	G_PA2317	TN
+paer	G_PA5357	TN
+paer	G_PA2290	TN
+paer	G_PA3179	TN
+paer	G_PA0996	FP
+paer	G_PA0338	TN
+paer	G_PA4872	TN
+paer	G_PA0065	TN
+paer	G_PA1257	TN
 paer	G_PA3471	TN
-paer	G_PA1649	TN
-paer	G_PA0238	TN
-paer	G_PA2141	TN
-paer	G_PA4367	TN
-paer	G_PA1569	TN
-paer	G_PA1222	TN
-paer	G_PA2693	TN
-paer	G_PA1810	TN
-paer	G_PA5427	TN
-paer	G_PA4929	TN
-paer	G_PA0604	TN
+paer	G_PA4919	TN
+paer	G_PA2922	TN
+paer	G_PA1971	TN
+paer	G_PA0322	TN
+paer	G_PA3443	TN
+paer	G_PA4188	TN
+paer	G_PA4160	TN
 paer	G_PA3165	TN
-paer	G_PA0562	TN
-paer	G_PA2648	TN
-paer	G_PA2815	TN
-paer	G_PA2512	TN
-paer	G_PA3219	FP
-paer	G_PA3930	TN
-paer	G_PA3418	TN
-paer	G_PA0444	TN
-paer	G_PA4604	TN
+paer	G_PA5442	TN
+paer	G_PA4072	TN
+paer	G_PA2315	TN
+paer	G_PA3251	TN
+paer	G_PA0935	TN
+paer	G_PA1423	TN
+paer	G_PA5504	TN
+paer	G_PA4501	TN
+paer	G_PA2004	TN
+paer	G_PA1144	TN
+paer	G_PA5170	TN
+paer	G_PA2518	TN
+paer	G_PA4980	TN
+paer	G_PA2994	TN
+paer	G_PA0494	TN
+paer	G_PA5385	TN
+paer	G_PA2062	TN
+paer	G_PA3114	TN
+paer	G_PA5436	TN
+paer	G_PA0437	TN
+paer	G_PA4498	TN
+paer	G_PA4911	TN
+paer	G_PA3541	TN
+paer	G_PA2552	TN
+paer	G_PA4353	TN
+paer	G_PA0238	TN
+paer	G_PA1340	TN
+paer	G_PA1215	TN
+paer	G_PA2025	TN
+paer	G_PA4061	TN
+paer	G_PA1601	TN
+paer	G_PA4599	TN
+paer	G_PA1919	TN
+paer	G_PA4183	TN
+paer	G_PA2100	TN
+paer	G_PA0897	TN
+paer	G_PA1631	TN
+paer	G_PA2689	TN
+paer	G_PA0029	TN
+paer	G_PA2321	TN
+paer	G_PA5312	TN
+paer	G_PA4024	TN
+paer	G_PA3589	TN
+paer	G_PA0355	TN
+paer	G_PA3083	TN
+paer	G_PA3938	TN
+paer	G_PA3333	TN
+paer	G_PA1497	TN
+paer	G_PA1672	TN
+paer	G_PA1204	TN
+paer	G_PA4088	TN
+paer	G_PA2912	TN
+paer	G_PA2295	TN
+paer	G_PA3328	TN
 paer	G_PA1256	TN
-paer	G_PA0337	TN
-paer	G_PA3506	TN
+paer	G_PA1173	TN
+paer	G_PA3195	TN
+paer	G_PA2330	TN
+paer	G_PA3106	TN
+paer	G_PA0754	TN
+paer	G_PA2642	TN
+paer	G_PA2638	TN
+paer	G_PA1781	TN
+paer	G_PA4097	TN
+paer	G_PA1334	TN
+paer	G_PA0796	TN
+paer	G_PA4029	TN
+paer	G_PA2995	TN
+paer	G_PA2710	TN
+paer	G_PA0836	TN
+paer	G_PA1773	TN
+paer	G_PA3437	TN
+paer	G_PA1727	TN
+paer	G_PA3628	TN
+paer	G_PA4228	TN
+paer	G_PA4865	TN
+paer	G_PA2000	TN
+paer	G_PA0229	TN
+paer	G_PA1276	TN
+paer	G_PA5106	TN
+paer	G_PA2910	TN
+paer	G_PA1779	TN
+paer	G_PA2071	TN
+paer	G_PA1342	TN
+paer	G_PA4064	TN
+paer	G_PA0782	TN
+paer	G_PA2548	TN
+paer	G_PA5334	TN
+paer	G_PA4908	TN
+paer	G_PA4128	TN
+paer	G_PA0299	TN
+paer	G_PA1071	TN
+paer	G_PA5529	TN
+paer	G_PA2014	TN
+paer	G_PA0565	TN
+paer	G_PA0016	TN
+paer	G_PA2856	TN
+paer	G_PA3299	TN
+paer	G_PA4355	TN
+paer	G_PA0325	TN
+paer	G_PA4091	TN
+paer	G_PA3629	TN
+paer	G_PA5092	TN
+paer	G_PA5093	TN
+paer	G_PA2210	TN
+paer	G_PA1636	TN
+paer	G_PA2392	TN
+paer	G_PA2554	TN
+paer	G_PA3116	TN
+paer	G_PA2397	TN
+paer	G_PA2265	TN
+paer	G_PA2356	TN
+paer	G_PA5150	TN
+paer	G_PA2769	TN
+paer	G_PA3014	TN
+paer	G_PA2505	TN
+paer	G_PA2520	TN
+paer	G_PA2395	TN
+paer	G_PA1932	FP
+paer	G_PA2514	TN
+paer	G_PA4404	TN
+paer	G_PA2973	TN
+paer	G_PA3119	TN
+paer	G_PA4837	TN
+paer	G_PA0887	TN
+paer	G_PA4015	TN
+paer	G_PA5098	TN
+paer	G_PA0421	TN
+paer	G_PA1486	TN
+paer	G_PA1120	TN
+paer	G_PA1819	TN
+paer	G_PA2557	TN
+paer	G_PA4123	TN
+paer	G_PA0361	TN
+paer	G_PA2641	TN
+paer	G_PA0861	TN
+paer	G_PA4098	TN
+paer	G_PA5378	TN
+paer	G_PA2104	TN
+paer	G_PA4620	FP
+paer	G_PA4126	TN
+paer	G_PA2152	TN
+paer	G_PA0443	TN
+paer	G_PA3217	TN
+paer	G_PA4548	TN
+paer	G_PA1638	TN
 paer	G_PA0425	TN
-paer	G_PA3223	TN
-paer	G_PA2416	TN
-paer	G_PA4194	TN
-paer	G_PA0996	FP
-paer	G_PA2786	TN
-paer	G_PA4121	TN
-paer	G_PA3039	TN
-paer	G_PA3195	TN
-paer	G_PA2155	TN
-paer	G_PA5248	TN
-paer	G_PA0962	TN
-paer	G_PA4148	TN
-paer	G_PA4917	TN
-paer	G_PA5169	TN
-paer	G_PA2052	TN
-paer	G_PA3177	TN
-paer	G_PA5394	TN
-paer	G_PA1982	TN
-paer	G_PA0235	TN
-paer	G_PA0397	TN
+paer	G_PA4867	TN
+paer	G_PA4161	TN
 paer	G_PA4894	TN
-paer	G_PA4331	TN
-paer	G_PA3542	TN
-paer	G_PA0331	TN
-paer	G_PA2192	TN
-paer	G_PA0031	TN
-paer	G_PA2350	TN
-paer	G_PA3582	TN
-paer	G_PA2304	TN
-paer	G_PA3344	TN
-paer	G_PA2891	TN
-paer	G_PA4825	TN
-paer	G_PA5334	TN
-paer	G_PA2007	TN
-paer	G_PA3592	TN
-paer	G_PA4959	TN
+paer	G_PA4905	TN
+paer	G_PA4889	TN
+paer	G_PA5291	TN
+paer	G_PA4809	TN
+paer	G_PA4473	TN
+paer	G_PA1384	TN
+paer	G_PA3314	TN
+paer	G_PA1297	TN
+paer	G_PA2625	TN
+paer	G_PA3277	TN
+paer	G_PA4443	TN
+paer	G_PA0892	TN
+paer	G_PA0108	TN
+paer	G_PA4400	TN
+paer	G_PA2215	TN
+paer	G_PA0883	TN
+paer	G_PA2691	TN
+paer	G_PA4124	TN
+paer	G_PA2119	TN
+paer	G_PA1028	TN
+paer	G_PA0547	TN
+paer	G_PA3657	TN
+paer	G_PA0945	FP
+paer	G_PA2153	TN
+paer	G_PA1964	TN
+paer	G_PA0521	TN
+paer	G_PA1521	TN
 paer	G_PA1997	TN
-paer	G_PA4507	TN
-paer	G_PA3020	TN
-paer	G_PA1260	TN
-paer	G_PA0832	TN
-paer	G_PA3547	TN
-paer	G_PA2266	TN
-paer	G_PA4050	TN
-paer	G_PA4113	TN
-paer	G_PA4190	TN
-paer	G_PA4499	FP
-paer	G_PA1019	TN
-paer	G_PA2389	TN
-paer	G_PA1758	FP
-paer	G_PA3562	TN
-paer	G_PA3874	TN
-paer	G_PA4192	TN
-paer	G_PA2099	TN
-paer	G_PA3764	TN
-paer	G_PA5387	TN
-paer	G_PA0898	TN
-paer	G_PA2443	TN
-paer	G_PA3210	TN
-paer	G_PA0796	TN
-paer	G_PA3438	TN
-paer	G_PA2135	TN
-paer	G_PA3840	TN
-paer	G_PA1501	TN
-paer	G_PA2195	TN
-paer	G_PA0280	TN
-paer	G_PA5095	TN
-paer	G_PA0206	TN
-paer	G_PA3530	TN
-paer	G_PA2147	TN
-paer	G_PA3780	TN
-paer	G_PA0782	TN
-paer	G_PA5133	TN
-paer	G_PA0897	TN
-paer	G_PA3525	FP
-paer	G_PA5118	TN
-paer	G_PA0447	TN
-paer	G_PA0854	TN
-paer	G_PA1962	TN
-paer	G_PA1944	TN
-paer	G_PA3305	TN
-paer	G_PA1770	TN
-paer	G_PA4091	TN
-paer	G_PA1807	TN
-paer	G_PA5154	TN
-paer	G_PA3936	TN
-paer	G_PA3749	TN
-paer	G_PA1519	TN
-paer	G_PA1983	TN
-paer	G_PA3579	TN
-paer	G_PA0237	TN
-paer	G_PA3445	TN
-paer	G_PA0372	TN
-paer	G_PA1112	TN
-paer	G_PA5099	TN
-paer	G_PA1999	TN
-paer	G_PA3754	TN
-paer	G_PA5435	TN
-paer	G_PA2247	TN
-paer	G_PA1557	TN
-paer	G_PA0872	FP
-paer	G_PA3092	TN
+paer	G_PA2507	TN
+paer	G_PA5217	TN
+paer	G_PA2074	TN
+paer	G_PA0792	TN
+paer	G_PA3687	TN
+paer	G_PA0297	TN
+paer	G_PA4167	TN
+paer	G_PA5375	TN
 paer	G_PA5025	TN
-paer	G_PA0744	TN
-paer	G_PA1616	TN
-paer	G_PA4170	TN
-paer	G_PA5036	TN
-paer	G_PA2940	TN
-paer	G_PA0795	FP
-paer	G_PA2649	TN
-paer	G_PA4919	TN
-paer	G_PA4356	TN
-paer	G_PA0285	TN
-paer	G_PA5046	TN
-paer	G_PA5529	TN
-paer	G_PA1565	TN
-paer	G_PA0889	TN
-paer	G_PA2857	TN
-paer	G_PA2521	TN
-paer	G_PA1566	TN
-paer	G_PA4330	TN
-paer	G_PA2160	TN
-paer	G_PA2188	TN
-paer	G_PA3538	TN
-paer	G_PA2003	TN
-paer	G_PA3019	TN
-paer	G_PA1479	TN
+paer	G_PA2709	TN
+paer	G_PA1863	TN
+paer	G_PA0223	TN
+paer	G_PA0165	TN
+paer	G_PA5082	TN
+paer	G_PA2327	TN
+paer	G_PA2158	TN
+paer	G_PA0312	TN
+paer	G_PA2923	TN
+paer	G_PA4949	TN
+paer	G_PA0244	TN
+paer	G_PA0958	TN
+paer	G_PA2616	TN
+paer	G_PA2264	TN
+paer	G_PA2700	TN
+paer	G_PA1147	TN
+paer	G_PA2366	TN
+paer	G_PA4804	TN
+paer	G_PA5018	TN
+paer	G_PA3529	TN
+paer	G_PA2151	TN
+paer	G_PA2261	TN
+paer	G_PA0603	TN
+paer	G_PA2888	TN
+paer	G_PA0755	TN
+paer	G_PA4994	TN
+paer	G_PA5376	TN
+paer	G_PA0205	TN
+paer	G_PA0366	TN
+paer	G_PA3004	TN
+paer	G_PA5094	TN
+paer	G_PA1537	TN
+paer	G_PA2248	TN
+paer	G_PA1338	TN
+paer	G_PA5498	TN
+paer	G_PA2683	TN
+paer	G_PA0347	TN
+paer	G_PA2990	TN
+paer	G_PA0605	TN
+paer	G_PA2072	TN
 paer	G_PA4137	TN
-paer	G_PA4705	TN
-paer	G_PA5390	TN
-paer	G_PA1950	FP
-paer	G_PA4538	TN
-paer	G_PA1922	TN
-paer	G_PA1340	TN
-paer	G_PA1916	TN
-paer	G_PA1131	TN
-paer	G_PA3362	TN
-paer	G_PA4731	TN
-paer	G_PA2900	TN
-paer	G_PA3252	TN
-paer	G_PA5357	TN
+paer	G_PA4127	TN
+paer	G_PA1214	TN
+paer	G_PA1140	TN
+paer	G_PA0888	TN
+paer	G_PA4507	TN
+paer	G_PA4192	TN
+paer	G_PA0597	TN
+paer	G_PA4615	TN
 paer	G_PA5366	TN
-paer	G_PA2933	TN
-paer	G_PA3173	TN
-paer	G_PA0220	TN
-paer	G_PA5214	TN
-paer	G_PA0431	TN
-paer	G_PA2263	TN
-paer	G_PA3924	TN
-paer	G_PA4620	TN
-paer	G_PA3175	TN
-paer	G_PA0866	TN
-paer	G_PA1515	TN
-paer	G_PA0427	TN
-paer	G_PA1926	TN
-paer	G_PA1854	TN
-paer	G_PA5013	TN
-paer	G_PA3839	TN
-paer	G_PA4149	TN
-paer	G_PA5217	TN
+paer	G_PA1633	TN
+paer	G_PA0531	TN
+paer	G_PA1498	TN
+paer	G_PA1823	TN
+paer	G_PA0300	TN
+paer	G_PA1288	TN
+paer	G_PA0962	TN
+paer	G_PA1124	TN
+paer	G_PA4990	TN
+paer	G_PA3442	TN
+paer	G_PA4771	TN
+paer	G_PA0666	TN
+paer	G_PA1962	TN
+paer	G_PA0387	TN
+paer	G_PA2815	TN
+paer	G_PA1501	TN
+paer	G_PA3858	TN
+paer	G_PA4150	TN
+paer	G_PA5188	TN
+paer	G_PA5045	TN
+paer	G_PA5355	FP
+paer	G_PA5143	FP
 paer	G_PA3043	TN
-paer	G_PA4022	TN
-paer	G_PA1318	TN
-paer	G_PA1540	TN
-paer	G_PA3533	TN
 paer	G_PA0931	TN
-paer	G_PA2536	TN
-paer	G_PA1017	TN
-paer	G_PA1140	TN
-paer	G_PA4676	TN
-paer	G_PA1931	TN
+paer	G_PA1999	TN
+paer	G_PA2446	TN
+paer	G_PA4538	TN
+paer	G_PA2932	TN
+paer	G_PA1901	TN
+paer	G_PA1163	TN
+paer	G_PA4860	TN
+paer	G_PA0119	TN
+paer	G_PA4023	TN
+paer	G_PA0234	TN
+paer	G_PA4900	TN
+paer	G_PA4231	TN
+paer	G_PA2297	FP
+paer	G_PA1809	TN
+paer	G_PA0403	TN
+paer	G_PA2711	TN
+paer	G_PA4470	TN
+paer	G_PA4792	TN
+paer	G_PA5186	TN
+paer	G_PA0394	TN
+paer	G_PA5268	TN
+paer	G_PA2340	TN
+paer	G_PA1812	TN
+paer	G_PA4742	TN
+paer	G_PA0730	FP
+paer	G_PA5426	FP
+paer	G_PA4122	TN
+paer	G_PA1991	TN
+paer	G_PA0331	TN
+paer	G_PA2796	TN
+paer	G_PA4604	TN
+paer	G_PA4201	TN
+paer	G_PA5074	TN
+paer	G_PA4522	TN
+paer	G_PA3876	TN
+paer	G_PA0107	TN
+paer	G_PA2339	TN
+paer	G_PA3188	TN
+paer	G_PA3268	TN
+paer	G_PA1562	TN
+paer	G_PA3930	TN
+paer	G_PA2974	TN
+paer	G_PA4909	TN
+paer	G_PA2969	TN
+paer	G_PA2348	TN
+paer	G_PA3888	TN
+paer	G_PA1576	TN
+paer	G_PA1926	TN
+paer	G_PA2389	TN
+paer	G_PA5153	TN
+paer	G_PA5500	TN
+paer	G_PA2843	TN
+paer	G_PA2084	TN
+paer	G_PA2443	TN
+paer	G_PA2203	TN
+paer	G_PA2821	TN
+paer	G_PA2929	TN
+paer	G_PA5439	TN
+paer	G_PA5415	TN
+paer	G_PA4236	TN
+paer	G_PA1518	TN
+paer	G_PA5257	TN
+paer	G_PA5214	TN
+paer	G_PA3511	TN
+paer	G_PA2445	TN
+paer	G_PA4330	TN
+paer	G_PA3505	TN
+paer	G_PA3219	FP
+paer	G_PA5427	TN
+paer	G_PA5413	TN
+paer	G_PA4918	TN
+paer	G_PA3175	TN
+paer	G_PA2603	TN
+paer	G_PA3560	TN
+paer	G_PA2296	TN
+paer	G_PA0184	TN
+paer	G_PA4034	TN
+paer	G_PA5466	TN
+paer	G_PA2916	TN
+paer	G_PA0872	FP
+paer	G_PA1131	TN
+paer	G_PA2185	TN
+paer	G_PA3356	TN
+paer	G_PA1739	TN
+paer	G_PA5541	TN
+paer	G_PA5503	TN
+paer	G_PA3942	TN
+paer	G_PA0807	TN
+paer	G_PA0743	TN
+paer	G_PA0550	TN
+paer	G_PA3066	TN
+paer	G_PA5035	TN
+paer	G_PA5235	TN
+paer	G_PA1519	TN
+paer	G_PA2007	TN
+paer	G_PA0106	TN
+paer	G_PA1810	TN
+paer	G_PA3452	TN
+paer	G_PA1517	TN
+paer	G_PA1240	TN
+paer	G_PA4807	TN
+paer	G_PA1654	TN
+paer	G_PA5154	TN
+paer	G_PA2598	TN
 paer	G_PA4020	TN
-paer	G_PA1502	TN
-paer	G_PA2391	TN
-paer	G_PA2856	TN
-paer	G_PA2294	TN
-paer	G_PA2323	TN
-paer	G_PA3254	TN
-paer	G_PA4865	TN
-paer	G_PA4519	TN
-paer	G_PA3217	TN
-paer	G_PA2204	TN
-paer	G_PA3312	TN
-paer	G_PA2978	TN
-paer	G_PA4724	TN
-paer	G_PA3189	TN
-paer	G_PA2018	TN
-paer	G_PA1049	TN
-paer	G_PA0753	TN
-paer	G_PA3437	TN
+paer	G_PA3093	TN
+paer	G_PA4356	TN
+paer	G_PA3540	TN
+paer	G_PA0444	TN
+paer	G_PA0510	TN
+paer	G_PA5096	TN
+paer	G_PA2250	TN
+paer	G_PA4001	TN
+paer	G_PA3177	TN
+paer	G_PA1360	TN
+paer	G_PA0380	TN
+paer	G_PA2083	TN
+paer	G_PA4959	TN
+paer	G_PA2263	TN
+paer	G_PA2812	TN
+paer	G_PA1409	TN
+paer	G_PA5097	TN
+paer	G_PA3863	TN
+paer	G_PA0231	TN
+paer	G_PA1918	TN
+paer	G_PA4910	TN
+paer	G_PA2408	TN
+paer	G_PA1052	TN
+paer	G_PA0794	TN
+paer	G_PA3279	TN
+paer	G_PA1590	TN
 paer	G_PA1554	TN
-paer	G_PA5497	TN
-paer	G_PA2888	TN
-paer	G_PA2346	TN
-paer	G_PA5018	TN
-paer	G_PA0865	TN
-paer	G_PA2212	TN
-paer	G_PA1376	TN
-paer	G_PA0899	TN
-paer	G_PA4096	TN
+paer	G_PA0990	TN
+paer	G_PA2640	TN
+paer	G_PA1019	TN
 paer	G_PA1016	TN
-paer	G_PA0231	TN
-paer	G_PA2317	TN
+paer	G_PA4892	TN
+paer	G_PA1489	TN
+paer	G_PA3295	TN
+paer	G_PA0545	TN
+paer	G_PA5468	TN
+paer	G_PA3610	TN
+paer	G_PA3459	TN
+paer	G_PA4811	TN
+paer	G_PA1275	TN
+paer	G_PA5421	TN
+paer	G_PA3761	TN
+paer	G_PA4152	TN
+paer	G_PA3975	FP
+paer	G_PA4893	TN
+paer	G_PA3768	TN
+paer	G_PA5112	TN
+paer	G_PA0286	FP
+paer	G_PA0139	TN
+paer	G_PA4265	TN
+paer	G_PA5377	TN
+paer	G_PA5388	TN
+paer	G_PA4289	TN
+paer	G_PA3873	TN
+paer	G_PA1346	TN
+paer	G_PA2466	TN
+paer	G_PA4975	TN
+paer	G_PA4773	TN
+paer	G_PA5175	TN
+paer	G_PA0865	TN
+paer	G_PA2394	TN
+paer	G_PA2599	TN
+paer	G_PA0352	TN
+paer	G_PA2649	TN
+paer	G_PA4977	TN
+paer	G_PA0846	TN
+paer	G_PA5393	TN
+paer	G_PA0224	TN
+paer	G_PA4195	TN
+paer	G_PA5187	TN
+paer	G_PA1649	TN
+paer	G_PA4971	TN
+paer	G_PA4428	TN
+paer	G_PA2012	TN
+paer	G_PA3550	TN
+paer	G_PA2409	TN
+paer	G_PA1883	TN
+paer	G_PA1194	TN
+paer	G_PA3925	TN
+paer	G_PA1808	TN
+paer	G_PA4899	TN
+paer	G_PA2217	TN
+paer	G_PA3417	TN
+paer	G_PA5249	TN
+paer	G_PA1007	TN
+paer	G_PA5524	TN
+paer	G_PA1135	TN
+paer	G_PA3210	TN
+paer	G_PA4233	TN
+paer	G_PA1429	FP
+paer	G_PA2159	TN
+paer	G_PA4843	TN
+paer	G_PA4393	TN
+paer	G_PA5434	TN
+paer	G_PA4700	TN
+paer	G_PA0849	TN
+paer	G_PA5304	TN
+paer	G_PA4504	TN
+paer	G_PA2155	TN
+paer	G_PA3723	TN
+paer	G_PA4618	TN
+paer	G_PA1254	TN
+paer	G_PA2512	TN
+paer	G_PA2125	TN
+paer	G_PA1072	TN
+paer	G_PA4187	TN
+paer	G_PA0913	TN
+paer	G_PA0103	TN
+paer	G_PA1499	TN
+paer	G_PA1893	TN
+paer	G_PA2680	TN
+paer	G_PA3190	TN
+paer	G_PA4796	TN
+paer	G_PA1221	TN
+paer	G_PA2537	TN
+paer	G_PA0386	TN
+paer	G_PA4861	TN
+paer	G_PA0220	TN
+paer	G_PA0954	TN
+paer	G_PA1567	TN
+paer	G_PA0898	TN
+paer	G_PA3780	TN
+paer	G_PA3454	TN
+paer	G_PA3692	TN
+paer	G_PA5418	TN
+paer	G_PA0240	TN
+paer	G_PA4788	TN
+paer	G_PA0744	TN
+paer	G_PA1500	TN
+paer	G_PA3613	TN
+paer	G_PA2114	TN
+paer	G_PA3366	TN
+paer	G_PA0337	TN
+paer	G_PA2693	TN
+paer	G_PA1946	TN
+paer	G_PA4891	TN
+paer	G_PA0291	TN
 paer	G_PA0303	TN
-paer	G_PA3858	TN
-paer	G_PA4006	TN
-paer	G_PA3560	TN
-paer	G_PA3783	TN
-paer	G_PA1252	TN
-paer	G_PA1341	TN
-paer	G_PA2321	TN
-paer	G_PA5415	TN
-paer	G_PA5524	TN
-paer	G_PA4839	TN
+paer	G_PA5095	TN
+paer	G_PA1993	TN
+paer	G_PA1797	TN
+paer	G_PA2611	TN
+paer	G_PA0546	FP
+paer	G_PA2350	TN
+paer	G_PA5368	TN
+paer	G_PA5435	TN
+paer	G_PA5508	FP
+paer	G_PA2329	TN
+paer	G_PA1325	TN
+paer	G_PA1752	TN
+paer	G_PA4705	TN
+paer	G_PA5510	TN
+paer	G_PA3561	TN
+paer	G_PA2357	TN
+paer	G_PA0198	TN
+paer	G_PA5133	TN
+paer	G_PA5310	TN
+paer	G_PA4505	TN
+paer	G_PA3690	TN
+paer	G_PA1485	TN
+paer	G_PA0130	TN
+paer	G_PA3548	TN
+paer	G_PA4050	TN
+paer	G_PA3733	TN
+paer	G_PA3963	TN
+paer	G_PA2342	TN
+paer	G_PA0324	TN
+paer	G_PA4358	TN
+paer	G_PA4859	TN
+paer	G_PA2089	TN
+paer	G_PA5206	TN
 paer	G_PA5263	FP
-paer	G_PA1735	TN
-paer	G_PA1524	TN
-paer	G_PA2495	TN
-paer	G_PA0437	TN
-paer	G_PA4990	TN
-paer	G_PA1334	TN
-paer	G_PA0292	TN
-paer	G_PA1204	TN
-paer	G_PA4444	TN
-paer	G_PA5377	TN
-paer	G_PA1257	TN
-paer	G_PA5130	TN
-paer	G_PA2008	TN
-paer	G_PA4265	TN
+paer	G_PA4499	FP
+paer	G_PA3891	TN
 paer	G_PA2448	TN
-paer	G_PA4899	TN
-paer	G_PA2039	TN
-paer	G_PA4041	TN
-paer	G_PA3713	TN
-paer	G_PA3183	TN
-paer	G_PA4506	TN
-paer	G_PA4715	TN
-paer	G_PA3761	TN
-paer	G_PA2691	TN
-paer	G_PA3188	TN
-paer	G_PA0745	FP
-paer	G_PA0132	TN
-paer	G_PA3758	TN
-paer	G_PA4859	TN
-paer	G_PA5429	TN
-paer	G_PA2065	TN
-paer	G_PA1008	TN
-paer	G_PA4900	TN
-paer	G_PA0188	TN
-paer	G_PA4646	TN
-paer	G_PA4400	TN
-paer	G_PA4979	TN
-paer	G_PA3448	TN
-paer	G_PA4206	TN
-paer	G_PA1127	TN
-paer	G_PA1172	TN
-paer	G_PA3751	TN
+paer	G_PA3672	TN
+paer	G_PA1553	TN
+paer	G_PA0788	TN
+paer	G_PA3766	TN
+paer	G_PA2887	TN
+paer	G_PA1635	TN
 paer	G_PA4216	TN
-paer	G_PA2616	TN
-paer	G_PA1590	TN
-paer	G_PA0143	FP
-paer	G_PA1861	TN
-paer	G_PA4910	TN
-paer	G_PA2748	TN
-paer	G_PA4628	TN
-paer	G_PA4016	TN
-paer	G_PA1654	TN
-paer	G_PA4061	TN
-paer	G_PA4123	TN
-paer	G_PA2828	TN
-paer	G_PA4496	TN
-paer	G_PA4171	TN
-paer	G_PA5547	TN
-paer	G_PA1429	FP
-paer	G_PA2185	TN
-paer	G_PA4615	TN
-paer	G_PA3066	TN
-paer	G_PA0883	TN
-paer	G_PA4343	TN
-paer	G_PA1485	TN
-paer	G_PA3524	TN
-paer	G_PA2407	TN
-paer	G_PA1027	TN
-paer	G_PA2638	TN
-paer	G_PA3131	TN
-paer	G_PA0901	TN
-paer	G_PA5272	TN
-paer	G_PA3876	TN
-paer	G_PA1175	TN
-paer	G_PA5479	TN
-paer	G_PA4773	TN
-paer	G_PA4905	TN
-paer	G_PA2553	TN
-paer	G_PA4810	TN
-paer	G_PA5035	TN
-paer	G_PA2640	TN
-paer	G_PA0927	TN
-paer	G_PA3253	TN
-paer	G_PA2929	TN
-paer	G_PA2975	TN
+paer	G_PA4898	TN
+paer	G_PA3579	TN
+paer	G_PA4707	TN
 paer	G_PA2127	TN
-paer	G_PA4829	TN
-paer	G_PA2537	TN
-paer	G_PA5100	TN
-paer	G_PA3798	TN
-paer	G_PA2307	TN
-paer	G_PA4358	TN
-paer	G_PA1806	TN
-paer	G_PA1919	FP
-paer	G_PA4858	TN
-paer	G_PA3543	TN
-paer	G_PA2520	TN
-paer	G_PA5420	TN
+paer	G_PA0136	TN
+paer	G_PA2165	TN
+paer	G_PA2009	TN
+paer	G_PA3254	TN
+paer	G_PA4467	TN
+paer	G_PA4715	TN
+paer	G_PA2279	TN
+paer	G_PA4694	FP
+paer	G_PA1813	TN
+paer	G_PA1113	TN
+paer	G_PA3253	TN
+paer	G_PA2135	TN
+paer	G_PA2322	TN
+paer	G_PA3764	TN
+paer	G_PA1546	TN
+paer	G_PA2997	TN
+paer	G_PA1198	TN
+paer	G_PA3445	TN
+paer	G_PA2996	TN
+paer	G_PA0036	FP
+paer	G_PA5287	TN
+paer	G_PA2924	TN
+paer	G_PA0203	TN
+paer	G_PA1421	TN
+paer	G_PA3886	TN
+paer	G_PA4862	TN
+paer	G_PA4676	TN
+paer	G_PA0949	TN
+paer	G_PA1843	TN
+paer	G_PA3234	TN
+paer	G_PA5547	TN
+paer	G_PA1916	TN
+paer	G_PA2141	TN
+paer	G_PA3300	TN
+paer	G_PA1207	TN
+paer	G_PA3169	TN
+paer	G_PA1278	TN
+paer	G_PA0030	TN
+paer	G_PA3176	TN
+paer	G_PA3250	TN
 paer	G_PA5231	TN
-paer	G_PA3517	TN
-paer	G_PA2637	TN
-paer	G_PA3561	TN
 paer	G_PA4180	TN
+paer	G_PA0378	TN
+paer	G_PA0242	TN
+paer	G_PA4594	TN
+paer	G_PA3659	TN
+paer	G_PA4654	TN
+paer	G_PA2079	TN
+paer	G_PA1950	TN
+paer	G_PA0934	TN
+paer	G_PA0447	TN
+paer	G_PA1770	TN
+paer	G_PA1807	TN
+paer	G_PA4513	TN
+paer	G_PA1175	TN
+paer	G_PA0302	TN
+paer	G_PA3047	TN
+paer	G_PA1493	TN
+paer	G_PA3533	TN
+paer	G_PA0795	TN
+paer	G_PA0426	TN
+paer	G_PA2688	TN
+paer	G_PA5272	TN
+paer	G_PA3582	TN
+paer	G_PA4193	TN
+paer	G_PA4722	TN
+paer	G_PA2646	TN
+paer	G_PA2160	TN
+paer	G_PA1433	TN
+paer	G_PA0493	TN
+paer	G_PA2800	TN
+paer	G_PA2393	TN
+paer	G_PA4841	TN
+paer	G_PA4976	TN
+paer	G_PA5017	TN
+paer	G_PA1764	TN
+paer	G_PA2111	TN
+paer	G_PA5130	TN
+paer	G_PA0901	TN
+paer	G_PA1569	TN
+paer	G_PA3514	TN
+paer	G_PA2870	TN
+paer	G_PA2993	TN
+paer	G_PA4858	TN
+paer	G_PA2214	TN
+paer	G_PA1687	TN
+paer	G_PA0313	TN
+paer	G_PA5417	TN
+paer	G_PA1172	TN
+paer	G_PA2550	TN
+paer	G_PA0804	TN
+paer	G_PA1217	TN
+paer	G_PA1984	TN
+paer	G_PA3862	FP
+paer	G_PA0397	TN
+paer	G_PA1258	TN
+paer	G_PA1341	TN
+paer	G_PA2555	TN
+paer	G_PA1566	TN
+paer	G_PA1983	TN
+paer	G_PA4194	TN
+paer	G_PA0166	TN
+paer	G_PA2587	TN
+paer	G_PA1920	TN
+paer	G_PA1683	TN
+paer	G_PA4006	TN
 paer	G_PA2493	TN
-paer	G_PA4428	TN
-paer	G_PA0792	TN
-paer	G_PA4742	TN
-paer	G_PA4918	TN
-paer	G_PA4161	TN
-paer	G_PA0783	TN
-paer	G_PA4994	TN
-paer	G_PA2522	TN
-paer	G_PA3444	TN
-paer	G_PA5021	TN
-paer	G_PA2446	TN
-paer	G_PA4159	TN
-paer	G_PA3825	TN
-paer	G_PA1901	TN
-paer	G_PA1061	TN
-paer	G_PA5171	TN
-paer	G_PA3004	TN
-paer	G_PA2074	TN
-paer	G_PA3607	TN
-paer	G_PA4779	TN
-paer	G_PA2315	TN
-paer	G_PA4201	TN
-paer	G_PA0164	TN
-paer	G_PA1541	TN
-paer	G_PA2386	TN
-paer	G_PA5207	TN
-paer	G_PA2144	TN
-paer	G_PA1346	TN
-paer	G_PA0450	TN
-paer	G_PA3563	TN
-paer	G_PA5092	TN
-paer	G_PA4662	FP
-paer	G_PA1596	TN
-paer	G_PA0531	TN
-paer	G_PA1384	TN
-paer	G_PA2938	TN
-paer	G_PA1628	TN
-paer	G_PA3891	TN
-paer	G_PA3790	TN
-paer	G_PA2509	TN
-paer	G_PA2995	TN
-paer	G_PA2445	TN
-paer	G_PA1297	TN
-paer	G_PA4486	TN
-paer	G_PA5388	TN
-paer	G_PA2409	TN
-paer	G_PA3609	TN
-paer	G_PA0835	TN
-paer	G_PA4478	TN
-paer	G_PA2395	TN
-paer	G_PA3550	TN
-paer	G_PA2514	TN
-paer	G_PA0117	TN
-paer	G_PA4891	TN
-paer	G_PA0119	TN
-paer	G_PA2624	TN
+paer	G_PA4054	FP
+paer	G_PA3304	TN
+paer	G_PA1737	TN
+paer	G_PA2826	TN
+paer	G_PA2580	TN
+paer	G_PA0890	TN
+paer	G_PA3903	TN
+paer	G_PA3542	TN
 paer	G_PA5445	TN
-paer	G_PA5312	TN
-paer	G_PA2910	TN
-paer	G_PA3106	TN
-paer	G_PA2280	TN
-paer	G_PA4947	TN
-paer	G_PA2035	TN
-paer	G_PA3598	TN
-paer	G_PA4466	TN
-paer	G_PA5418	TN
-paer	G_PA1739	TN
-paer	G_PA2924	TN
-paer	G_PA2424	TN
-paer	G_PA2394	TN
-paer	G_PA3920	TN
-paer	G_PA1638	TN
-paer	G_PA2913	TN
-paer	G_PA3314	TN
-paer	G_PA2958	TN
-paer	G_PA4037	TN
-paer	G_PA0355	TN
-paer	G_PA5075	TN
-paer	G_PA4595	TN
-paer	G_PA4613	TN
-paer	G_PA4127	TN
-paer	G_PA2990	TN
-paer	G_PA0380	TN
-paer	G_PA5367	TN
-paer	G_PA1819	TN
-paer	G_PA5176	TN
-paer	G_PA1567	TN
-paer	G_PA1633	TN
-paer	G_PA1124	TN
-paer	G_PA5399	TN
-paer	G_PA5172	FP
-paer	G_PA3837	TN
-paer	G_PA3472	TN
-paer	G_PA5206	TN
-paer	G_PA4151	TN
-paer	G_PA2639	TN
-paer	G_PA0658	TN
-paer	G_PA4389	TN
-paer	G_PA2465	TN
+paer	G_PA3933	TN
+paer	G_PA3444	TN
+paer	G_PA0102	TN
+paer	G_PA1902	TN
+paer	G_PA3296	TN
+paer	G_PA5309	TN
+paer	G_PA4343	TN
 paer	G_PA4365	TN
-paer	G_PA2408	TN
-paer	G_PA4443	TN
-paer	G_PA5386	TN
-paer	G_PA5495	TN
-paer	G_PA1164	TN
-paer	G_PA2646	TN
-paer	G_PA3690	TN
-paer	G_PA4189	TN
-paer	G_PA0273	TN
-paer	G_PA1135	TN
-paer	G_PA5111	TN
-paer	G_PA2473	TN
-paer	G_PA5503	TN
-paer	G_PA4513	TN
-paer	G_PA2477	TN
-paer	G_PA1321	TN
-paer	G_PA3364	TN
-paer	G_PA3442	TN
-paer	G_PA1516	TN
-paer	G_PA1493	TN
-paer	G_PA0016	TN
-paer	G_PA2162	TN
-paer	G_PA5539	TN
-paer	G_PA2997	TN
-paer	G_PA0934	TN
-paer	G_PA1535	TN
-paer	G_PA4599	TN
-paer	G_PA3234	TN
-paer	G_PA1143	TN
-paer	G_PA2603	TN
-paer	G_PA4236	TN
-paer	G_PA3549	TN
-paer	G_PA1028	TN
+paer	G_PA4956	TN
 paer	G_PA1319	TN
-paer	G_PA4843	TN
-paer	G_PA3186	TN
-paer	G_PA1780	TN
-paer	G_PA1523	TN
-paer	G_PA1576	TN
-paer	G_PA5145	TN
-paer	G_PA2356	TN
-paer	G_PA1425	TN
-paer	G_PA0140	TN
-paer	G_PA5112	TN
-paer	G_PA3277	TN
-paer	G_PA3957	TN
-paer	G_PA2275	TN
-paer	G_PA1678	TN
-paer	G_PA4128	TN
-paer	G_PA2042	TN
-paer	G_PA0730	FP
-paer	G_PA2119	TN
-paer	G_PA1491	TN
-paer	G_PA5098	TN
-paer	G_PA0902	TN
-paer	G_PA5155	TN
-paer	G_PA3935	TN
-paer	G_PA2041	TN
-paer	G_PA0102	TN
-paer	G_PA3179	TN
-paer	G_PA1781	TN
-paer	G_PA2232	TN
-paer	G_PA1174	TN
-paer	G_PA3610	TN
-paer	G_PA0590	TN
-paer	G_PA3937	TN
-paer	G_PA3692	TN
-paer	G_PA4542	FP
-paer	G_PA2343	TN
-paer	G_PA0932	TN
-paer	G_PA1736	TN
-paer	G_PA3768	TN
-paer	G_PA4088	TN
+paer	G_PA1164	TN
+paer	G_PA3603	TN
+paer	G_PA0851	TN
+paer	G_PA0148	TN
+paer	G_PA4810	TN
+paer	G_PA3357	TN
+paer	G_PA4731	TN
+paer	G_PA2414	TN
+paer	G_PA3924	TN
+paer	G_PA4888	TN
+paer	G_PA3020	TN
 paer	G_PA4868	TN
-paer	G_PA2108	TN
-paer	G_PA4861	TN
-paer	G_PA2397	TN
-paer	G_PA5093	TN
-paer	G_PA0154	TN
-paer	G_PA0743	TN
-paer	G_PA3766	TN
-paer	G_PA1198	TN
-paer	G_PA3687	TN
-paer	G_PA3890	TN
-paer	G_PA1514	TN
-paer	G_PA1052	TN
-paer	G_PA3531	TN
+paer	G_PA3783	TN
+paer	G_PA3957	TN
+paer	G_PA3999	TN
 paer	G_PA0190	TN
-paer	G_PA4862	TN
-paer	G_PA3889	TN
+paer	G_PA2147	TN
+paer	G_PA2914	TN
+paer	G_PA5228	TN
+paer	G_PA2918	TN
+paer	G_PA5046	TN
+paer	G_PA2828	TN
+paer	G_PA4431	TN
+paer	G_PA4645	TN
+paer	G_PA0889	TN
+paer	G_PA2536	TN
+paer	G_PA1783	TN
+paer	G_PA0292	TN
+paer	G_PA2306	TN
+paer	G_PA3524	TN
+paer	G_PA4025	TN
+paer	G_PA2407	TN
+paer	G_PA2252	TN
+paer	G_PA3525	FP
+paer	G_PA0235	TN
+paer	G_PA4143	TN
+paer	G_PA3549	TN
+paer	G_PA0450	TN
+paer	G_PA2035	TN
+paer	G_PA2304	TN
+paer	G_PA4510	TN
+paer	G_PA1515	TN
+paer	G_PA4724	TN
+paer	G_PA0074	TN
+paer	G_PA0228	TN
+paer	G_PA4329	TN
+paer	G_PA1598	TN
+paer	G_PA3517	TN
+paer	G_PA2473	TN
+paer	G_PA0604	TN
+paer	G_PA3568	TN
+paer	G_PA0482	TN
+paer	G_PA5302	TN
+paer	G_PA4078	TN
+paer	G_PA4772	TN
+paer	G_PA2495	TN
+paer	G_PA0400	TN
+paer	G_PA2500	TN
+paer	G_PA2913	TN
+paer	G_PA2522	TN
+paer	G_PA3311	TN
 paer	G_PA3416	TN
-paer	G_PA1339	TN
-paer	G_PA3581	TN
-paer	G_PA0326	TN
-paer	G_PA2012	TN
-paer	G_PA4470	TN
-paer	G_PA5082	TN
-paer	G_PA2932	TN
+paer	G_PA2011	TN
 paer	G_PA4073	TN
-paer	G_PA2505	TN
-paer	G_PA5413	TN
-paer	G_PA4872	TN
-paer	G_PA0130	TN
-paer	G_PA2344	TN
-paer	G_PA5106	TN
-paer	G_PA4708	TN
-paer	G_PA4976	TN
-paer	G_PA2013	TN
-paer	G_PA3406	TN
-paer	G_PA5184	TN
-paer	G_PA1820	TN
-paer	G_PA1959	FP
-paer	G_PA5421	TN
-paer	G_PA0949	TN
-paer	G_PA1948	TN
-paer	G_PA2912	TN
-paer	G_PA2262	TN
-paer	G_PA3877	TN
-paer	G_PA4054	FP
-paer	G_PA5097	TN
-paer	G_PA0193	TN
+paer	G_PA1049	TN
+paer	G_PA5129	TN
+paer	G_PA1195	TN
+paer	G_PA4647	TN
+paer	G_PA4839	TN
+paer	G_PA2424	TN
+paer	G_PA3543	TN
+paer	G_PA3739	TN
+paer	G_PA0237	TN
+paer	G_PA3302	TN
+paer	G_PA1112	TN
+paer	G_PA2499	TN
+paer	G_PA0747	TN
+paer	G_PA0667	TN
+paer	G_PA4829	TN
+paer	G_PA0944	TN
+paer	G_PA4502	TN
+paer	G_PA3825	TN
+paer	G_PA3709	TN
+paer	G_PA5367	TN
+paer	G_PA4041	TN
+paer	G_PA2396	TN
+paer	G_PA3228	TN
+paer	G_PA3618	TN
+paer	G_PA5176	TN
+paer	G_PA4119	TN
+paer	G_PA4779	TN
+paer	G_PA3301	TN
+paer	G_PA2776	TN
+paer	G_PA2623	TN
+paer	G_PA0950	TN
+paer	G_PA1268	TN
+paer	G_PA0399	TN
 paer	G_PA5353	FP
-paer	G_PA3366	TN
-paer	G_PA2153	TN
-paer	G_PA2148	TN
-paer	G_PA2250	TN
-paer	G_PA0752	TN
-paer	G_PA3883	TN
-paer	G_PA0148	TN
-paer	G_PA2812	TN
-paer	G_PA3568	TN
-paer	G_PA4442	TN
-paer	G_PA2854	TN
-paer	G_PA5103	TN
-paer	G_PA1726	TN
-paer	G_PA1002	TN
-paer	G_PA2625	TN
-paer	G_PA0361	TN
-paer	G_PA2599	TN
-paer	G_PA1337	TN
-paer	G_PA2923	TN
-paer	G_PA2207	TN
-paer	G_PA1828	TN
-paer	G_PA1497	TN
-paer	G_PA0755	TN
-paer	G_PA2158	TN
-paer	G_PA0860	TN
-paer	G_PA5074	TN
+paer	G_PA1602	TN
+paer	G_PA3970	TN
+paer	G_PA0766	TN
+paer	G_PA0439	TN
+paer	G_PA5172	FP
+paer	G_PA4913	TN
+paer	G_PA3019	TN
+paer	G_PA1927	TN
+paer	G_PA4402	TN
+paer	G_PA4149	TN
+paer	G_PA2595	TN
+paer	G_PA1778	TN
 paer	G_PA4635	TN
-paer	G_PA0426	TN
-paer	G_PA1007	TN
-paer	G_PA4458	FP
-paer	G_PA3299	TN
-paer	G_PA5416	TN
-paer	G_PA3693	TN
-paer	G_PA0400	TN
-paer	G_PA1498	TN
-paer	G_PA4805	TN
-paer	G_PA3311	TN
-paer	G_PA5170	TN
-paer	G_PA4860	TN
-paer	G_PA0139	TN
-paer	G_PA0836	TN
-paer	G_PA1202	TN
-paer	G_PA0105	TN
-paer	G_PA1552	TN
-paer	G_PA2214	TN
-paer	G_PA1488	TN
-paer	G_PA0227	TN
-paer	G_PA5540	TN
-paer	G_PA1496	TN
-paer	G_PA0565	TN
-paer	G_PA1276	TN
+paer	G_PA3838	TN
+paer	G_PA3608	TN
+paer	G_PA4733	TN
+paer	G_PA3937	TN
+paer	G_PA3172	TN
+paer	G_PA5420	TN
+paer	G_PA1931	TN
+paer	G_PA2253	TN
+paer	G_PA5298	TN
 paer	G_PA4770	TN
-paer	G_PA2014	TN
-paer	G_PA2210	TN
-paer	G_PA2009	TN
-paer	G_PA0394	TN
-paer	G_PA1489	TN
-paer	G_PA3975	FP
-paer	G_PA3169	TN
-paer	G_PA2104	TN
-paer	G_PA0861	TN
-paer	G_PA4522	TN
-paer	G_PA5252	TN
-paer	G_PA4498	TN
-paer	G_PA0336	TN
-paer	G_PA4796	TN
-paer	G_PA2664	TN
-paer	G_PA4841	TN
-paer	G_PA1620	TN
-paer	G_PA2595	TN
+paer	G_PA5398	TN
+paer	G_PA5497	TN
+paer	G_PA2207	TN
+paer	G_PA5047	TN
+paer	G_PA0562	TN
+paer	G_PA3604	TN
+paer	G_PA0860	TN
+paer	G_PA5152	TN
+paer	G_PA5379	TN
+paer	G_PA5036	TN
+paer	G_PA4789	TN
+paer	G_PA1535	TN
+paer	G_PA0075	TN
+paer	G_PA1876	TN
+paer	G_PA4016	TN
+paer	G_PA2597	TN
 paer	G_PA2926	TN
-paer	G_PA0521	TN
-paer	G_PA5135	TN
-paer	G_PA2306	TN
-paer	G_PA1734	TN
-paer	G_PA5153	TN
-paer	G_PA2623	TN
-paer	G_PA3514	TN
-paer	G_PA2598	TN
-paer	G_PA1089	TN
-paer	G_PA0494	TN
-paer	G_PA3025	TN
-paer	G_PA3723	TN
-paer	G_PA2290	TN
-paer	G_PA1808	TN
-paer	G_PA2767	TN
-paer	G_PA4673	TN
-paer	G_PA1051	TN
-paer	G_PA4706	TN
-paer	G_PA5541	TN
-paer	G_PA0224	TN
-paer	G_PA3452	TN
-paer	G_PA4025	TN
-paer	G_PA2796	TN
-paer	G_PA2342	TN
-paer	G_PA2079	TN
-paer	G_PA5257	TN
-paer	G_PA4598	TN
-paer	G_PA2827	TN
-paer	G_PA4126	TN
+paer	G_PA4901	TN
+paer	G_PA3344	TN
+paer	G_PA3545	TN
+paer	G_PA2249	TN
+paer	G_PA2509	TN
+paer	G_PA5173	TN
+paer	G_PA3598	TN
+paer	G_PA2391	TN
+paer	G_PA5501	TN
+paer	G_PA3181	TN
+paer	G_PA0265	TN
+paer	G_PA1337	TN
+paer	G_PA1487	TN
+paer	G_PA0193	TN
+paer	G_PA1854	TN
+paer	G_PA2521	TN
+paer	G_PA2726	TN
+paer	G_PA3039	TN
+paer	G_PA0301	TN
+paer	G_PA2262	TN
+paer	G_PA3947	TN
+paer	G_PA0902	TN
+paer	G_PA2933	TN
+paer	G_PA2911	TN
+paer	G_PA0427	TN
+paer	G_PA2202	TN
+paer	G_PA1202	TN
+paer	G_PA2294	TN
+paer	G_PA0266	TN
+paer	G_PA2533	TN
+paer	G_PA1910	TN
+paer	G_PA2163	TN
+paer	G_PA2008	TN
+paer	G_PA2416	TN
+paer	G_PA2041	TN
+paer	G_PA1905	TN
+paer	G_PA3759	TN
+paer	G_PA0761	TN
+paer	G_PA3235	TN
+paer	G_PA3607	TN
+paer	G_PA3883	TN
+paer	G_PA0927	TN
+paer	G_PA3936	TN
+paer	G_PA1318	TN
+paer	G_PA0835	TN
+paer	G_PA4979	TN
+paer	G_PA3469	TN
+paer	G_PA0854	TN
+paer	G_PA2765	TN
+paer	G_PA2644	TN
+paer	G_PA0132	TN
+paer	G_PA4613	TN
+paer	G_PA1425	TN
+paer	G_PA2278	TN
+paer	G_PA0575	TN
+paer	G_PA3406	TN
+paer	G_PA4108	TN
+paer	G_PA1742	TN
+paer	G_PA4206	TN
+paer	G_PA1400	TN
+paer	G_PA2142	TN
 paer	G_PA5354	FP
-paer	G_PA4565	TN
-paer	G_PA4700	TN
-paer	G_PA5292	TN
-paer	G_PA4193	TN
-paer	G_PA0667	TN
-paer	G_PA0266	TN
-paer	G_PA5310	TN
-paer	G_PA4092	TN
-paer	G_PA0506	TN
+paer	G_PA0250	TN
+paer	G_PA3438	TN
+paer	G_PA2328	TN
+paer	G_PA3860	TN
+paer	G_PA2854	TN
+paer	G_PA3025	TN
+paer	G_PA4947	TN
+paer	G_PA5281	TN
+paer	G_PA2213	TN
+paer	G_PA3693	TN
+paer	G_PA4226	TN
+paer	G_PA1317	TN
+paer	G_PA0870	TN
+paer	G_PA4468	TN
+paer	G_PA0752	TN
+paer	G_PA3889	TN
+paer	G_PA2099	TN
+paer	G_PA5459	TN
+paer	G_PA2890	TN
+paer	G_PA3839	TN
+paer	G_PA1620	TN
+paer	G_PA1479	TN
+paer	G_PA3897	TN
+paer	G_PA4189	TN
+paer	G_PA1736	TN
+paer	G_PA4359	TN
+paer	G_PA3313	TN
+paer	G_PA2975	TN
+paer	G_PA2477	TN
+paer	G_PA1089	TN
+paer	G_PA4688	TN
 paer	G_PA2349	TN
-paer	G_PA1433	TN
-paer	G_PA5504	TN
-paer	G_PA0244	TN
-paer	G_PA1729	TN
-paer	G_PA3540	TN
-paer	G_PA5258	TN
-paer	G_PA1214	TN
-paer	G_PA1764	TN
-paer	G_PA4943	TN
-paer	G_PA5510	TN
-paer	G_PA5417	TN
-paer	G_PA2295	TN
-paer	G_PA1240	TN
-paer	G_PA2513	TN
-paer	G_PA5241	TN
-paer	G_PA0198	TN
-paer	G_PA2769	TN
-paer	G_PA3469	TN
-paer	G_PA0313	TN
-paer	G_PA2248	TN
-paer	G_PA4909	TN
-paer	G_PA2164	TN
-paer	G_PA4804	TN
-paer	G_PA1073	TN
+paer	G_PA5099	TN
+paer	G_PA4929	TN
+paer	G_PA4334	TN
+paer	G_PA4190	TN
+paer	G_PA2999	TN
+paer	G_PA4973	TN
+paer	G_PA3609	TN
+paer	G_PA2386	TN
+paer	G_PA1540	TN
+paer	G_PA3023	TN
+paer	G_PA0524	TN
 paer	G_PA2634	TN
-paer	G_PA3615	TN
-paer	G_PA4187	TN
+paer	G_PA3531	TN
+paer	G_PA2268	TN
+paer	G_PA2803	TN
+paer	G_PA1818	TN
+paer	G_PA5540	TN
+paer	G_PA0495	TN
+paer	G_PA1628	TN
+paer	G_PA0371	TN
+paer	G_PA4079	TN
+paer	G_PA1735	TN
+paer	G_PA1073	TN
+paer	G_PA4096	TN
+paer	G_PA3581	TN
+paer	G_PA3831	TN
+paer	G_PA0899	TN
+paer	G_PA1948	TN
+paer	G_PA3929	TN
+paer	G_PA1252	TN
+paer	G_PA3312	TN
+paer	G_PA0326	TN
+paer	G_PA2018	TN
+paer	G_PA1002	TN
+paer	G_PA3415	TN
+paer	G_PA4506	TN
+paer	G_PA0688	TN
+paer	G_PA0285	TN
+paer	G_PA4434	TN
+paer	G_PA1339	TN
+paer	G_PA2351	TN
+paer	G_PA1734	TN
+paer	G_PA0230	TN
+paer	G_PA0105	TN
+paer	G_PA2323	TN
+paer	G_PA2513	TN
+paer	G_PA3562	TN
+paer	G_PA1524	TN
+paer	G_PA5416	TN
+paer	G_PA5518	TN
+paer	G_PA5516	TN
+paer	G_PA0506	TN
+paer	G_PA0153	TN
+paer	G_PA1320	TN
+paer	G_PA1552	TN
+paer	G_PA5390	TN
+paer	G_PA1678	TN
+paer	G_PA2701	TN
+paer	G_PA0117	TN
+paer	G_PA5252	TN
+paer	G_PA5177	TN
+paer	G_PA5169	TN
+paer	G_PA0869	TN
+paer	G_PA4519	TN
+paer	G_PA5216	TN
+paer	G_PA3798	TN
+paer	G_PA0158	TN
+paer	G_PA4588	TN
+paer	G_PA4234	TN
+paer	G_PA0031	TN
+paer	G_PA5145	TN
+paer	G_PA0206	TN
+paer	G_PA3877	TN
+paer	G_PA1820	TN
+paer	G_PA2915	TN
+paer	G_PA3068	TN
+paer	G_PA4170	TN
+paer	G_PA2553	TN
+paer	G_PA1255	TN
+paer	G_PA4595	TN
+paer	G_PA1958	TN
+paer	G_PA0129	TN
+paer	G_PA2002	TN
 paer	G_PA5180	TN
-paer	G_PA4719	TN
+paer	G_PA4544	TN
+paer	G_PA3673	TN
+paer	G_PA5091	TN
+paer	G_PA3631	TN
+paer	G_PA0534	TN
+paer	G_PA5370	TN
+paer	G_PA1287	TN
+paer	G_PA5184	TN
+paer	G_PA3874	TN
+paer	G_PA4930	TN
+paer	G_PA5258	TN
 paer	G_PA4781	TN
-paer	G_PA0075	TN
-paer	G_PA4907	TN
 paer	G_PA5476	TN
-paer	G_PA1070	TN
-paer	G_PA0733	TN
-paer	G_PA0281	TN
-paer	G_PA4231	TN
-paer	G_PA0234	TN
-paer	G_PA0530	TN
-paer	G_PA4888	TN
-paer	G_PA3604	TN
-paer	G_PA1947	TN
-paer	G_PA0890	TN
-paer	G_PA2689	TN
-paer	G_PA2999	TN
-paer	G_PA1120	TN
-paer	G_PA5045	TN
-paer	G_PA4023	TN
-paer	G_PA1194	TN
-paer	G_PA0301	TN
-paer	G_PA0688	TN
-paer	G_PA3454	TN
-paer	G_PA0917	TN
-paer	G_PA4108	TN
-paer	G_PA2351	TN
-paer	G_PA5215	TN
-paer	G_PA0440	TN
-paer	G_PA1797	TN
-paer	G_PA5466	TN
-paer	G_PA4152	TN
-paer	G_PA0403	TN
+paer	G_PA1750	TN
+paer	G_PA3551	TN
+paer	G_PA3316	TN
+paer	G_PA3584	TN
+paer	G_PA2164	TN
+paer	G_PA1949	TN
+paer	G_PA3573	TN
+paer	G_PA3455	TN
+paer	G_PA1502	TN
+paer	G_PA0227	TN
+paer	G_PA0895	TN
+paer	G_PA1393	TN
+paer	G_PA4503	TN
+paer	G_PA5505	TN
+paer	G_PA0199	TN
+paer	G_PA1959	FP
+paer	G_PA2943	TN
+paer	G_PA2108	TN
+paer	G_PA0247	TN
+paer	G_PA2344	TN
+paer	G_PA2073	TN
+paer	G_PA1786	TN
+paer	G_PA3512	TN
+paer	G_PA2053	TN
+paer	G_PA0185	TN
+paer	G_PA4389	TN
+paer	G_PA4981	TN
+paer	G_PA3875	TN
+paer	G_PA1326	TN
+paer	G_PA5372	TN
+paer	G_PA3448	TN
+paer	G_PA3441	TN
+paer	G_PA2857	TN
+paer	G_PA2516	TN
+paer	G_PA3530	TN
+paer	G_PA1541	TN
+paer	G_PA3315	TN
+paer	G_PA2003	TN
+paer	G_PA4213	TN
 paer	G_PA1933	TN
-paer	G_PA2348	TN
-paer	G_PA4893	TN
-paer	G_PA2366	TN
-paer	G_PA4024	TN
-paer	G_PA2002	TN
-paer	G_PA1119	TN
-paer	G_PA0870	TN
-paer	G_PA2442	TN
-paer	G_PA4688	TN
-paer	G_PA5175	TN
-paer	G_PA1687	TN
-paer	G_PA1823	TN
-paer	G_PA3709	TN
-paer	G_PA3128	TN
-paer	G_PA3114	TN
+paer	G_PA2494	TN
+paer	G_PA2280	TN
+paer	G_PA2124	TN
+paer	G_PA0298	TN
+paer	G_PA2609	TN
+paer	G_PA0336	TN
+paer	G_PA5473	TN
+paer	G_PA5103	TN
+paer	G_PA2212	TN
+paer	G_PA5523	TN
+paer	G_PA0188	TN
+paer	G_PA5386	TN
+paer	G_PA1982	TN
+paer	G_PA0866	TN
+paer	G_PA1726	TN
 paer	G_PA4204	TN
-paer	G_PA5516	TN
+paer	G_PA2535	TN
+paer	G_PA0143	TN
+paer	G_PA1780	TN
+paer	G_PA3920	TN
+paer	G_PA4022	TN
+paer	G_PA5118	TN
+paer	G_PA5530	TN
+paer	G_PA3547	TN
 paer	G_PA0838	TN
-paer	G_PA3954	TN
-paer	G_PA3897	TN
-paer	G_PA2572	TN
-paer	G_PA1631	TN
-paer	G_PA2641	TN
-paer	G_PA2643	TN
-paer	G_PA0299	TN
-paer	G_PA1672	TN
-paer	G_PA0482	TN
-paer	G_PA0158	TN
-paer	G_PA3181	TN
-paer	G_PA2202	TN
-paer	G_PA0443	TN
-paer	G_PA4908	TN
-paer	G_PA0029	TN
-paer	G_PA5436	TN
-paer	G_PA1195	TN
-paer	G_PA0347	TN
-paer	G_PA3672	TN
-paer	G_PA5173	TN
-paer	G_PA3505	TN
-paer	G_PA5487	TN
-paer	G_PA5508	TN
-paer	G_PA5355	FP
-paer	G_PA3267	TN
-paer	G_PA1400	TN
-paer	G_PA3455	TN
-paer	G_PA3529	TN
-paer	G_PA3947	TN
+paer	G_PA4151	TN
+paer	G_PA4982	TN
+paer	G_PA2822	TN
 paer	G_PA1418	TN
-paer	G_PA1905	TN
-paer	G_PA0547	TN
-paer	G_PA0666	TN
-paer	G_PA0113	TN
-paer	G_PA1147	TN
-paer	G_PA4504	TN
-paer	G_PA2062	TN
-paer	G_PA2073	TN
-paer	G_PA2011	TN
-paer	G_PA2700	TN
-paer	G_PA2580	TN
+paer	G_PA5242	TN
+paer	G_PA2435	TN
+paer	G_PA2777	TN
+paer	G_PA2188	TN
+paer	G_PA1292	TN
+paer	G_PA3790	TN
 paer	G_PA2413	TN
-paer	G_PA0265	TN
-paer	G_PA2072	TN
-paer	G_PA4594	TN
-paer	G_PA2996	TN
-paer	G_PA0846	TN
-paer	G_PA4119	TN
-paer	G_PA1423	TN
-paer	G_PA3602	TN
-paer	G_PA0378	TN
-paer	G_PA1421	TN
-paer	G_PA4789	TN
-paer	G_PA2688	TN
-paer	G_PA0473	TN
+paer	G_PA0280	TN
+paer	G_PA5020	TN
+paer	G_PA0283	TN
+paer	G_PA3546	TN
+paer	G_PA1410	TN
+paer	G_PA4864	TN
+paer	G_PA0590	TN
+paer	G_PA2572	TN
+paer	G_PA4565	TN
+paer	G_PA2043	TN
+paer	G_PA5100	TN
+paer	G_PA5181	TN
+paer	G_PA4153	TN
+paer	G_PA2065	TN
+paer	G_PA3131	TN
+paer	G_PA3754	TN
+paer	G_PA0204	TN
+paer	G_PA1922	TN
+paer	G_PA0273	TN
+paer	G_PA3394	TN
+paer	G_PA2978	TN
 paer	G_PA0896	TN
-paer	G_PA3597	TN
-paer	G_PA5187	TN
-paer	G_PA3886	TN
-paer	G_PA2151	TN
-paer	G_PA0654	TN
-paer	G_PA3875	TN
-paer	G_PA3014	TN
-paer	G_PA2969	TN
-paer	G_PA3548	TN
-paer	G_PA2822	TN
-paer	G_PA4971	TN
-paer	G_PA2297	TN
-paer	G_PA2843	TN
-paer	G_PA4124	TN
-paer	G_PA3512	TN
-paer	G_PA4334	TN
-paer	G_PA5152	TN
-paer	G_PA1779	TN
-paer	G_PA0023	TN
-paer	G_PA1876	TN
-sone	G_SO1199	TP
-sone	G_SO4220	FN
-sone	G_SO1351	TP
-sone	G_SO0930	FN
-sone	G_SO2896	FN
-sone	G_SO4254	FN
-sone	G_SO1171	FN
-sone	G_SO2416	FN
-sone	G_SO0215	TP
+paer	G_PA0440	TN
+paer	G_PA0441	TN
+paer	G_PA5075	TN
+paer	G_PA2219	TN
+paer	G_PA5479	TN
+paer	G_PA4486	TN
+paer	G_PA3267	TN
+paer	G_PA4163	TN
+paer	G_PA4464	TN
+paer	G_PA5539	TN
+paer	G_PA0608	TN
+sone	G_SO3291	FN
+sone	G_SO3308	FN
+sone	G_SO1642	TP
+sone	G_SO0929	FN
+sone	G_SO1792	FN
+sone	G_SO3466	FN
+sone	G_SO0280	FN
+sone	G_SO1928	FN
+sone	G_SO0207	TP
+sone	G_SO1168	FN
+sone	G_SO3653	TP
+sone	G_SO1856	FN
 sone	G_SO2741	FN
-sone	G_SO4190	FN
+sone	G_SO4219	TP
+sone	G_SO3441	FN
+sone	G_SO3638	FN
+sone	G_SO4221	TP
 sone	G_SO0869	TP
-sone	G_SO0426	FN
-sone	G_SO3534	FN
-sone	G_SO0842	FN
-sone	G_SO0435	FN
-sone	G_SO3067	FN
-sone	G_SO1198	FN
-sone	G_SO4249	TP
-sone	G_SO1200	FN
-sone	G_SO1893	FN
-sone	G_SO1927	FN
-sone	G_SO4741	FN
-sone	G_SO2895	TP
-sone	G_SO0228	FN
+sone	G_SO1639	TP
+sone	G_SO2222	FN
+sone	G_SO3309	FN
+sone	G_SO2613	TP
 sone	G_SO2635	FN
-sone	G_SO2337	FN
-sone	G_SO1322	FN
-sone	G_SO0207	TP
-sone	G_SO0778	FN
-sone	G_SO2217	FN
-sone	G_SO2776	FN
-sone	G_SO3837	FN
-sone	G_SO4313	TP
-sone	G_SO2802	FN
-sone	G_SO4684	TP
-sone	G_SO3956	TP
+sone	G_SO2416	FN
+sone	G_SO3437	TP
+sone	G_SO4754	FN
+sone	G_SO3827	TP
+sone	G_SO4190	FN
+sone	G_SO1634	TP
+sone	G_SO1931	FN
+sone	G_SO0840	FN
+sone	G_SO1335	FN
+sone	G_SO0506	FN
+sone	G_SO3533	TP
+sone	G_SO4747	FN
 sone	G_SO1640	FN
-sone	G_SO1625	TP
-sone	G_SO3646	FN
-sone	G_SO1725	FN
+sone	G_SO4314	TP
 sone	G_SO1879	TP
-sone	G_SO3427	FN
-sone	G_SO0933	FN
-sone	G_SO1930	FN
-sone	G_SO0280	FN
-sone	G_SO3440	FN
-sone	G_SO2801	TP
-sone	G_SO1164	FN
-sone	G_SO1792	FN
-sone	G_SO2410	FN
-sone	G_SO4751	FN
-sone	G_SO2842	FN
-sone	G_SO3529	FN
-sone	G_SO4224	TP
-sone	G_SO3309	FN
-sone	G_SO3291	FN
-sone	G_SO4749	FN
-sone	G_SO0213	TP
-sone	G_SO2471	TP
-sone	G_SO1635	TP
-sone	G_SO2222	FN
-sone	G_SO3827	TP
+sone	G_SO2750	FN
+sone	G_SO4220	FN
 sone	G_SO2415	FN
-sone	G_SO4747	FN
-sone	G_SO3834	FN
-sone	G_SO3437	TP
-sone	G_SO4754	FN
-sone	G_SO3653	TP
-sone	G_SO4217	FN
-sone	G_SO0413	TP
+sone	G_SO1300	TP
+sone	G_SO2330	FN
+sone	G_SO2217	FN
+sone	G_SO2402	FN
+sone	G_SO2410	FN
+sone	G_SO1929	FN
+sone	G_SO4308	TP
 sone	G_SO3547	FN
-sone	G_SO1627	FN
-sone	G_SO1108	FN
-sone	G_SO4214	TP
-sone	G_SO4222	TP
-sone	G_SO3957	TP
-sone	G_SO0468	FN
+sone	G_SO0778	FN
+sone	G_SO4313	TP
+sone	G_SO1109	FN
+sone	G_SO1200	FN
 sone	G_SO4753	FN
-sone	G_SO1789	FN
-sone	G_SO3836	TP
-sone	G_SO1928	FN
+sone	G_SO3546	FN
+sone	G_SO4249	TP
+sone	G_SO4223	TP
+sone	G_SO3464	FN
+sone	G_SO4222	TP
+sone	G_SO3070	TP
+sone	G_SO4214	TP
+sone	G_SO1631	FN
+sone	G_SO1862	TP
+sone	G_SO3948	TP
+sone	G_SO4218	FN
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 sone	G_SO4748	FN
-sone	G_SO3438	TP
-sone	G_SO1291	FN
-sone	G_SO3546	FN
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 sone	G_SO4750	FN
-sone	G_SO4752	FN
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-sone	G_SO4308	TP
-sone	G_SO0929	FN
-sone	G_SO3312	TP
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-sone	G_SO1931	FN
-sone	G_SO0432	FN
-sone	G_SO1631	FN
-sone	G_SO1168	FN
-sone	G_SO4221	TP
-sone	G_SO4602	FN
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 sone	G_SO0053	FN
-sone	G_SO1639	TP
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-sone	G_SO1641	FN
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-sone	G_SO1828	FN
-sone	G_SO3464	FN
-sone	G_SO1525	TP
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-sone	G_SO2751	FN
-sone	G_SO2750	FN
-sone	G_SO2274	FN
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-sone	G_SO2775	TP
-sone	G_SO3638	FN
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 sone	G_SO2018	TP
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 sone	G_SO4199	TP
-sone	G_SO1109	FN
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 sone	G_SO2264	FN
 sone	G_SO0361	TP
-sone	G_SO0992	FN
-sone	G_SO2478	TP
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-sone	G_SO1335	FN
-sone	G_SO0840	FN
-sone	G_SO4219	TP
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-sone	G_SO0506	FN
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 sone	G_SO3469	TP
-sone	G_SO3948	TP
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-sone	G_SO4218	FN
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-sone	G_SO1929	FN
-sone	G_SO4223	TP
-sone	G_SO4309	TN
-sone	G_SO0781	TN
-sone	G_SO4417	TN
-sone	G_SO0538	TN
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-sone	G_SO4055	TN
-sone	G_SO1292	TN
-sone	G_SO4573	FP
-sone	G_SO3805	TN
-sone	G_SOA0006	TN
-sone	G_SO1264	TN
-sone	G_SO0262	TN
-sone	G_SO4469	TN
-sone	G_SO1103	TN
-sone	G_SO0020	TN
-sone	G_SO3865	TN
-sone	G_SO0613	TN
-sone	G_SO1122	TN
-sone	G_SO0830	TN
-sone	G_SO4281	TN
-sone	G_SO2333	TN
-sone	G_SO4502	TN
-sone	G_SO3140	TN
-sone	G_SO1910	FP
-sone	G_SO3271	TN
-sone	G_SO0512	TN
-sone	G_SO1037	TN
-sone	G_SO1140	FP
-sone	G_SO2248	TN
-sone	G_SO3954	TN
-sone	G_SO4445	TN
-sone	G_SO2488	TN
-sone	G_SO3779	TN
-sone	G_SO0860	TN
-sone	G_SO0260	TN
-sone	G_SO0750	TN
-sone	G_SO2342	FP
-sone	G_SO1897	TN
-sone	G_SO0279	TN
-sone	G_SO1682	TN
-sone	G_SO0398	TN
-sone	G_SO1551	TN
-sone	G_SO1214	TN
-sone	G_SO2244	TN
-sone	G_SO2886	TN
-sone	G_SO1302	TN
-sone	G_SO2592	TN
-sone	G_SO0073	TN
-sone	G_SO4446	TN
-sone	G_SO3937	TN
-sone	G_SO4241	TN
-sone	G_SO2093	TN
-sone	G_SO3579	TN
-sone	G_SO1141	TN
-sone	G_SO2756	TN
-sone	G_SO2421	TN
-sone	G_SO4600	TN
-sone	G_SO4383	FP
-sone	G_SO0190	TN
-sone	G_SO1724	TN
-sone	G_SO1010	TN
-sone	G_SO3863	TN
-sone	G_SO1030	TN
-sone	G_SO4030	TN
-sone	G_SO1865	TN
-sone	G_SO2617	TN
-sone	G_SO0831	TN
-sone	G_SO0862	TN
-sone	G_SO1495	TN
-sone	G_SO4291	TN
-sone	G_SO2743	TN
-sone	G_SO3497	TN
-sone	G_SO3855	TN
-sone	G_SO2452	TN
-sone	G_SO1623	TN
-sone	G_SO3023	TN
-sone	G_SO1901	TN
-sone	G_SO2915	TN
-sone	G_SO1042	TN
-sone	G_SO1526	FP
-sone	G_SO1461	TN
-sone	G_SO1021	TN
-sone	G_SO1783	TN
-sone	G_SO1271	TN
-sone	G_SO3817	TN
-sone	G_SO4316	TN
-sone	G_SO1681	TN
-sone	G_SO3492	TN
-sone	G_SO3288	TN
-sone	G_SO0544	TN
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 sone	G_SO1665	TN
-sone	G_SO2094	TN
-sone	G_SO3467	TN
-sone	G_SO2644	TN
-sone	G_SO2737	TN
-sone	G_SO4654	TN
-sone	G_SO0968	TN
-sone	G_SO2923	TN
-sone	G_SO3177	TN
-sone	G_SO4233	TN
-sone	G_SO3814	TN
-sone	G_SO3895	TN
-sone	G_SO0694	TN
-sone	G_SO2419	TN
-sone	G_SO1158	TN
-sone	G_SO3471	TN
-sone	G_SO3923	TN
-sone	G_SO2347	TN
-sone	G_SO0693	TN
-sone	G_SO1667	TN
-sone	G_SO3634	TN
-sone	G_SO2072	TN
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-sone	G_SO3706	TN
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-sone	G_SO0343	TN
-sone	G_SO1018	TN
-sone	G_SO0919	TN
-sone	G_SO1877	TN
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-sone	G_SO3136	TN
-sone	G_SO4466	TN
-sone	G_SO1274	TN
-sone	G_SO0464	TN
-sone	G_SO3105	TN
-sone	G_SO1014	TN
-sone	G_SO3705	TN
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+sone	G_SO0162	TN
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 sone	G_SO4335	FP
-sone	G_SO3673	TN
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-sone	G_SO2260	TN
-sone	G_SO0806	TN
-sone	G_SO1812	TN
-sone	G_SO0900	TN
-sone	G_SO0438	TN
-sone	G_SO4302	TN
-sone	G_SO1870	TN
-sone	G_SO2767	TN
-sone	G_SO3759	TN
-sone	G_SO0719	TN
-sone	G_SO1236	TN
-sone	G_SO2922	TN
-sone	G_SO1656	TN
-sone	G_SO0858	TN
-sone	G_SO2745	TN
-sone	G_SO4346	TN
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 sone	G_SO2871	TN
-sone	G_SO0970	TN
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-sone	G_SO4575	FP
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-sone	G_SO2443	TN
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-sone	G_SO4609	TN
-sone	G_SO3723	TN
-sone	G_SO0427	TN
-sone	G_SO2629	TN
-sone	G_SO0442	TN
-sone	G_SO0177	TN
-sone	G_SO4396	TN
-sone	G_SO2280	TN
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 sone	G_SO1483	TN
-sone	G_SO1894	TN
-sone	G_SO1646	TN
-sone	G_SO1760	TN
-sone	G_SO1364	TN
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 sone	G_SO2286	TN
-sone	G_SO1019	TN
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-sone	G_SO4597	TN
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-sone	G_SO2054	TN
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-sone	G_SO0805	TN
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-sone	G_SO1239	TN
-sone	G_SO0810	TN
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-sone	G_SO1219	TN
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 sone	G_SO3491	TN
-sone	G_SO2643	TN
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-sone	G_SO4574	TN
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-sone	G_SO3735	TN
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-sone	G_SO3715	TN
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-sone	G_SO0846	TN
-sone	G_SO3598	TN
-sone	G_SO2336	TN
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-sone	G_SO3071	TN
-sone	G_SO3991	TN
-sone	G_SO1142	TN
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-sone	G_SO3507	TN
-sone	G_SO4227	TN
-sone	G_SO2096	TN
-sone	G_SO1896	TN
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-sone	G_SO0870	FP
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-sone	G_SO3175	TN
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-sone	G_SO4410	FP
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-sone	G_SO3763	TN
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-sone	G_SO1853	TN
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-sone	G_SO1430	TN
-sone	G_SO0820	TN
-sone	G_SO1979	TN
-sone	G_SO0572	TN
-sone	G_SO4730	TN
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 sone	G_SO2927	TN
-sone	G_SO4079	TN
-sone	G_SO0107	TN
-sone	G_SO4706	TN
-sone	G_SO0162	TN
-sone	G_SO1009	TN
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+sone	G_SO4713	FP
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+sone	G_SO0608	TN
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+sone	G_spontaneous	FP
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+sone	G_SO3728	FP
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 sone	G_SO0534	TN
-sone	G_SO0807	TN
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-sone	G_SO2768	TN
-sone	G_SO4657	TN
-sone	G_SO1677	TN
-sone	G_SO2228	TN
-sone	G_SO2489	TN
-sone	G_SO1519	TN
-sone	G_SO2185	TN
-sone	G_SO4230	TN
-sone	G_SO1017	TN
-sone	G_SO1980	TN
-sone	G_SO0756	TN
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-sone	G_SO0340	TN
-sone	G_SO2541	TN
-sone	G_SO1397	TN
-sone	G_SO2473	TN
-sone	G_SO4349	TN
-sone	G_SO2588	TN
-sone	G_SO4447	TN
-sone	G_SO4739	TN
-sone	G_SO3631	TN
-sone	G_SO3803	TN
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-sone	G_SO1676	TN
-sone	G_SO4208	TN
-sone	G_SO1261	TN
-sone	G_SO3317	TN
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+sone	G_SO2774	TN
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-sone	G_SO2491	TN
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-sone	G_SOA0098	TN
-sone	G_SO4212	TN
-sone	G_SO2593	TN
-sone	G_SO0859	TN
-sone	G_SO0025	TN
-sone	G_SO0095	TN
-sone	G_SO0770	TN
-sone	G_SO1105	TN
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-sone	G_SO3358	TN
-sone	G_SO2581	TN
-sone	G_SO2220	TN
-sone	G_SO0726	TN
-sone	G_SO3287	TN
-sone	G_SO2857	TN
+sone	G_SO4304	TN
+sone	G_SO4369	TN
+sone	G_SO1239	TN
+sone	G_SO4374	TN
 sone	G_SO0567	TN
-sone	G_SO4364	TN
-sone	G_SO0795	TN
-sone	G_SO3774	TN
-sone	G_SO2373	TN
-sone	G_SO3197	TN
-sone	G_SO1490	TN
-sone	G_SO4653	TN
+sone	G_SO4382	FP
+sone	G_SO1111	TN
+sone	G_SO3583	TN
 sone	G_SO3741	TN
-sone	G_SO2364	TN
-sone	G_SO3553	TN
-sone	G_SO1871	TN
-sone	G_SO2020	TN
-sone	G_SO3293	TN
-sone	G_SO3386	TN
-sone	G_SO0610	TN
-sone	G_SO4608	TN
-sone	G_SO3748	TN
-sone	G_SO2706	TN
-sone	G_SO4673	TN
+sone	G_SO2279	TN
+sone	G_SO3136	TN
+sone	G_SO0741	TN
+sone	G_SO1292	TN
+sone	G_SO2208	TN
+sone	G_SO3969	TN
+sone	G_SO2404	FP
+sone	G_SO4509	TN
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+sone	G_SO1526	FP
+sone	G_SO3555	TN
+sone	G_SO4295	TN
+sone	G_SO0277	TN
+sone	G_SO0900	TN
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+sone	G_SO1268	TN
+sone	G_SO1870	TN
+sone	G_SO2136	TN
+sone	G_SO4425	TN
+sone	G_SO0858	TN
+sone	G_SO2620	TN
+sone	G_SO3022	TN
+sone	G_SO1682	TN
+sone	G_SO0802	TN
+sone	G_SO1122	TN
+sone	G_SO1896	TN
+sone	G_SO0999	TN
 sone	G_SO2065	TN
-sone	G_SO0048	TN
-sone	G_SO1744	TN
-sone	G_SO4568	TN
-sone	G_SO1290	TN
-sone	G_SO0604	TN
-sone	G_SO2099	TN
-sone	G_SO1217	TN
-sone	G_SO1895	TN
-sone	G_SO3967	TN
-sone	G_SO2203	FP
-sone	G_SO1275	TN
-sone	G_SO1352	TN
-sone	G_SO4475	TN
+sone	G_SO0743	TN
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+sone	G_SO3145	TN
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+sone	G_SO4174	TN
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+sone	G_SO3463	TN
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+sone	G_SO4305	TN
+sone	G_SO2768	TN
 sone	G_SO0520	TN
-sone	G_SO2487	TN
-sone	G_SO0424	TN
+sone	G_SO3130	TN
+sone	G_SO0401	TN
+sone	G_SO2441	TN
+sone	G_SO1142	TN
+sone	G_SO3916	TN
+sone	G_SO1803	TN
+sone	G_SO0341	TN
+sone	G_SO2069	TN
+sone	G_SO2347	TN
+sone	G_SO4241	TN
+sone	G_SO4480	TN
 sone	G_SO2303	TN
-sone	G_SO4693	TN
-sone	G_SO4002	TN
-sone	G_SO1954	TN
-sone	G_SO0017	TN
-sone	G_SO0408	TN
-sone	G_SO3433	TN
-sone	G_SO0406	TN
-sone	G_SO3728	FP
-sone	G_SO2793	TN
-sone	G_SO4290	TN
-sone	G_SO4274	TN
-sone	G_SO2536	TN
-sone	G_SO2044	TN
-sone	G_SO4576	TN
-sone	G_SO4357	TN
-sone	G_SO4146	TN
+sone	G_SO3863	TN
+sone	G_SO4676	FP
+sone	G_SO0512	TN
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+sone	G_SO2911	TN
+sone	G_SO0029	TN
+sone	G_SO0958	TN
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+sone	G_SO4297	TN
+sone	G_SO1272	TN
+sone	G_SO3271	TN
 sone	G_SO1755	TN
-sone	G_SO4672	TN
-sone	G_SO1622	TN
-sone	G_SO4095	TN
-sone	G_SO0040	FP
-sone	G_SO2620	TN
-sone	G_SO3341	TN
-sone	G_SO1899	TN
-sone	G_SO3821	TN
-sone	G_SO1706	TN
-sone	G_SO1521	TN
-sone	G_SO2603	TN
-sone	G_SO2913	TN
-sone	G_SO3463	TN
-sone	G_SO4141	TN
-sone	G_SO4323	TN
-sone	G_SO0069	TN
-sone	G_SO3338	TN
-sone	G_SO3435	TN
-sone	G_SO3455	TN
-sone	G_SO3545	TN
-sone	G_SO4371	TN
-sone	G_SO2474	TN
-sone	G_SO2098	TN
-sone	G_SO1367	TN
-sone	G_SO3599	TN
-sone	G_SO2912	TN
-sone	G_SO4425	TN
-sone	G_SO4235	TN
-sone	G_SO3505	TN
-sone	G_SO3904	TN
-sone	G_SO0765	TN
-sone	G_SO0949	TN
-sone	G_SO3736	TN
-sone	G_SO0530	TN
-sone	G_SO3768	TN
-sone	G_SO2525	TN
-sone	G_SO3286	TN
-sone	G_SO2408	TN
-sone	G_SO4692	TN
-sone	G_SO1313	TN
-sone	G_SO3965	TN
-sone	G_SO1001	TN
+sone	G_SO0585	TN
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+sone	G_SO0001	TN
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 sone	G_SO0932	TN
-sone	G_SO2485	TN
-sone	G_SO3442	TN
-sone	G_SO4118	TN
-sone	G_SO1221	TN
-sone	G_SO0259	TN
-sone	G_SO0569	TN
-sone	G_SO2178	TN
-sone	G_SO3903	TN
-sone	G_SO4712	TN
+sone	G_SO0862	TN
+sone	G_SO1724	TN
+sone	G_SO2487	TN
+sone	G_SO4147	TN
+sone	G_SO2920	FP
 sone	G_SO2361	TN
-sone	G_SO4051	TN
-sone	G_SO3641	TN
-sone	G_SO1332	TN
-sone	G_SO1971	TN
-sone	G_SO4092	TN
-sone	G_SO2862	TN
-sone	G_SO4731	TN
-sone	G_SO3771	TN
-sone	G_SO2856	TN
-sone	G_SO2174	TN
-sone	G_SO1803	TN
-sone	G_SO2052	TN
-sone	G_SOA0114	TN
-sone	G_SO1324	TN
-sone	G_SO4234	TN
-sone	G_SO0798	TN
-sone	G_SO0518	TN
-sone	G_SO0609	TN
-sone	G_SO3414	TN
-sone	G_SO0160	TN
-sone	G_SO0873	TN
-sone	G_SO4674	TN
-sone	G_SO3359	TN
-sone	G_SO0740	TN
-sone	G_SO1307	TN
-sone	G_SO2090	TN
-sone	G_SO3916	TN
-sone	G_SO3285	TN
-sone	G_SO3517	TN
-sone	G_SO3583	TN
-sone	G_SO0278	TN
-sone	G_SO0029	TN
-sone	G_SO4676	FP
-sone	G_SO3664	TN
-sone	G_SO3145	TN
-sone	G_SO3354	TN
-sone	G_SO3600	TN
-sone	G_SO1560	TN
-sone	G_SO2268	TN
-sone	G_SO0741	TN
-sone	G_SO0818	TN
-sone	G_SO4407	TN
-sone	G_SO2853	TN
+sone	G_SO2067	TN
+sone	G_SO1141	TN
+sone	G_SO0141	TN
+sone	G_SO1784	TN
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+sone	G_SO4316	TN
+sone	G_SO4181	TN
+sone	G_SOA0161	TN
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+sone	G_SO0779	TN
+sone	G_SO4281	TN
+sone	G_SO0406	TN
+sone	G_SO1664	TN
+sone	G_SO1522	TN
+sone	G_SO1805	TN
+sone	G_SO2016	TN
+sone	G_SO0340	TN
+sone	G_SO4054	TN
+sone	G_SO1723	TN
+sone	G_SO1981	TN
+sone	G_SO1519	TN
 sone	G_SO1429	TN
+sone	G_SO3079	FP
+sone	G_SO2563	TN
+sone	G_SO1019	TN
+sone	G_SO0811	TN
+sone	G_SO4538	TN
+sone	G_SO3599	TN
+sone	G_SO0598	TN
+sone	G_SO2474	TN
+sone	G_SO3542	TN
+sone	G_SO4739	TN
+sone	G_SO4733	TN
+sone	G_SO3860	TN
+sone	G_SO2072	TN
+sone	G_SO3803	TN
+sone	G_SO1498	TN
+sone	G_SO3634	TN
+sone	G_SO0142	TN
+sone	G_SO1932	TN
+sone	G_SO0617	TN
 sone	G_SOA0164	TN
-sone	G_SO4713	FP
-sone	G_SO4151	TN
-sone	G_SO0197	TN
-sone	G_SO1111	TN
-sone	G_SO1391	TN
-sone	G_SO3022	TN
-sone	G_SO0344	TN
-sone	G_SO0725	TN
-sone	G_SO0504	TN
-sone	G_SO1107	TN
-sone	G_SO1101	TN
-sone	G_SO2237	TN
-sone	G_SO0560	TN
-sone	G_SO4448	TN
-sone	G_SO2833	TN
-sone	G_SO0882	TN
-sone	G_SO3554	TN
+sone	G_SO0518	TN
 sone	G_SO1418	TN
-sone	G_SO4374	TN
-sone	G_SO2362	TN
-sone	G_SO0108	TN
-sone	G_SO4318	TN
-sone	G_SO2772	TN
-sone	G_SOA0049	TN
-sone	G_SO3692	TN
-sone	G_SO0585	TN
-sone	G_SO3864	TN
-sone	G_SO3541	TN
-sone	G_SO3657	TN
-sone	G_SO0437	TN
-sone	G_SO2725	TN
-sone	G_SO2350	TN
-sone	G_SO1034	TN
-sone	G_SO1218	TN
-sone	G_SO0097	TN
-sone	G_SO1782	TN
-sone	G_SO3080	TN
-sone	G_SO2115	TN
-sone	G_SO4503	TN
-sone	G_SO1368	TN
-sone	G_SO0345	TN
-sone	G_SO0591	TN
-sone	G_SO2916	TN
-sone	G_SO3984	TN
-sone	G_SO3049	TN
-sone	G_SO0583	TN
-sone	G_SO1277	TN
-sone	G_SO0046	TN
-sone	G_SO4056	TN
-sone	G_SO2880	TN
-sone	G_SO4133	TN
-sone	G_SO3565	TN
-sone	G_SO4413	TN
-sone	G_SO3542	TN
-sone	G_SO4181	TN
-sone	G_SO2069	TN
-sone	G_SO0102	TN
-sone	G_SO4245	TN
-sone	G_SO4344	TN
-sone	G_SO0545	TN
-sone	G_SO0286	FP
-sone	G_SO1481	TN
-sone	G_SO1655	TN
-sone	G_SO2537	TN
-sone	G_SO0276	TN
-sone	G_SO0419	FP
-sone	G_SO0401	TN
-sone	G_SO0956	TN
+sone	G_SO1059	TN
+sone	G_SO1236	TN
 sone	G_SO4081	TN
-sone	G_SO0519	TN
-sone	G_SO1498	TN
-sone	G_SO1484	TN
-sone	G_SO2434	TN
-sone	G_SO2600	TN
-sone	G_SO2017	TN
-sone	G_SO1052	TN
-sone	G_SO1716	TN
-sone	G_SO2445	TN
-sone	G_SO2631	TN
-sone	G_SO3130	TN
-sone	G_SO0098	TN
-sone	G_SO4799	TN
-sone	G_SO1336	TN
-sone	G_SO1033	TN
-sone	G_SO1805	TN
-sone	G_SO1493	TN
-sone	G_SO2448	TN
-sone	G_SO4297	TN
-sone	G_SO3908	TN
-sone	G_SO4295	TN
-sone	G_SO2338	TN
-sone	G_SO0774	TN
-sone	G_SO0511	TN
-sone	G_SO0131	TN
-sone	G_SO3577	TN
-sone	G_SO2486	TN
-sone	G_SO4426	TN
-sone	G_SO1891	TN
-sone	G_SO3678	TN
-sone	G_SO1016	TN
-sone	G_SO4585	TN
-sone	G_SO0308	TN
-sone	G_SO3057	TN
-sone	G_SO4457	TN
-sone	G_SO2236	TN
-sone	G_SO0999	TN
-sone	G_SO3063	TN
-sone	G_SO4480	TN
-sone	G_SO1273	TN
-sone	G_SO0747	TN
-sone	G_SO1232	TN
-sone	G_SO2587	TN
-sone	G_SO4062	TN
-sone	G_SO3726	TN
-sone	G_SO4515	TN
-sone	G_SO3963	TN
-sone	G_SO3780	TN
+sone	G_SO3505	TN
+sone	G_SO4002	TN
+sone	G_SO0424	TN
+sone	G_SO0805	TN
+sone	G_SOA0006	TN
+sone	G_SO4527	TN
+sone	G_SO2364	TN
+sone	G_SO1001	TN
+sone	G_SO2857	TN
+sone	G_SO1013	TN
+sone	G_SO4523	TN
+sone	G_SO4693	TN
+sone	G_SO3293	TN
+sone	G_SO2473	TN
+sone	G_SO4564	TN
 sone	G_SO0780	TN
-sone	G_SO1925	TN
-sone	G_SO4607	TN
-sone	G_SO1389	TN
+sone	G_SO1865	TN
+sone	G_SO0815	TN
+sone	G_SO2923	TN
+sone	G_SO2541	TN
+sone	G_SO0959	TN
+sone	G_SO1044	TN
+sone	G_SO2631	TN
+sone	G_SO4654	TN
+sone	G_SO2489	TN
+sone	G_SO3349	TN
+sone	G_SO2191	TN
 sone	G_SO0314	TN
+sone	G_SO4396	TN
+sone	G_SO2017	TN
+sone	G_SO1397	TN
+sone	G_SO1912	TN
+sone	G_SO2073	TN
+sone	G_SO2096	TN
+sone	G_SO1900	TN
+sone	G_SO1666	TN
+sone	G_SO1275	TN
+sone	G_SO3392	TN
+sone	G_SO2237	TN
+sone	G_SO2616	TN
+sone	G_SO3195	TN
+sone	G_SO0262	TN
+sone	G_SO1017	TN
+sone	G_SO1623	TN
+sone	G_SO3412	TN
+sone	G_SO3517	TN
+sone	G_SO4657	TN
+sone	G_SOA0159	TN
+sone	G_SO0750	TN
+sone	G_SO0263	TN
+sone	G_SO0504	TN
+sone	G_SO3506	TN
+sone	G_SO2398	TN
+sone	G_SO3461	TN
+sone	G_SO0276	TN
+sone	G_SO2588	TN
+sone	G_SO2248	TN
+sone	G_SO0097	TN
+sone	G_SO2197	TN
 sone	G_SO3382	TN
-sone	G_SO1156	TN
-sone	G_SO0742	TN
-sone	G_SO1208	TN
-sone	G_SO1952	TN
-sone	G_SO1363	TN
-sone	G_SO1301	TN
-sone	G_SO1505	TN
-sone	G_SO4458	TN
-sone	G_SO1494	TN
-sone	G_SO2394	TN
-sone	G_SO1708	TN
-sone	G_SO1799	TN
-sone	G_SO0229	TN
-sone	G_SO4382	FP
-sone	G_SO2253	TN
-sone	G_SO2928	TN
-sone	G_SO4405	TN
-sone	G_SO0760	TN
-sone	G_SO4131	TN
-sone	G_SO0618	TN
-sone	G_SO1326	TN
-sone	G_SO0084	TN
-sone	G_SO3054	TN
+sone	G_SO1901	TN
+sone	G_SO1336	TN
+sone	G_SO1647	TN
+sone	G_SO1362	TN
+sone	G_SO1302	TN
+sone	G_SO4607	TN
+sone	G_SO4092	TN
+sone	G_SO0968	TN
+sone	G_SO3287	TN
+sone	G_SO3747	TN
+sone	G_SO0027	TN
+sone	G_SO2525	TN
 sone	G_SO2492	TN
-sone	G_SO0021	TN
-sone	G_SO1325	TN
-sone	G_SO4195	TN
-sone	G_SO0354	FP
-sone	G_SO1007	TN
-sone	G_SO1502	TN
-sone	G_SO0024	TN
-sone	G_SO3695	TN
-sone	G_SO1015	TN
-sone	G_SO2937	TN
-sone	G_SO0312	TN
-sone	G_SO1043	TN
-sone	G_SO0822	TN
-sone	G_SO3461	TN
-sone	G_SO1331	TN
-sone	G_SO0779	TN
-sone	G_SO4367	TN
-sone	G_SO3953	TN
-sone	G_SO4538	TN
-sone	G_SO4660	TN
-sone	G_SO4315	TN
-sone	G_SO2359	TN
-sone	G_SO1503	TN
-sone	G_SO1215	TN
-sone	G_SO1233	TN
-sone	G_SO3585	TN
-sone	G_SO2019	TN
-sone	G_SO3352	TN
-sone	G_SO2713	TN
-sone	G_SO1120	TN
-sone	G_SO2754	TN
+sone	G_SO3359	TN
+sone	G_SO1941	TN
+sone	G_SO4212	TN
+sone	G_SO0025	TN
+sone	G_SO3966	TN
+sone	G_SO4405	TN
+sone	G_SO0846	TN
+sone	G_SO4576	TN
+sone	G_SO2879	TN
+sone	G_SO2115	TN
+sone	G_SO3588	TN
+sone	G_SO3105	TN
+sone	G_SO0922	TN
+sone	G_SO1978	TN
+sone	G_SO1902	TN
+sone	G_SO0949	TN
+sone	G_SO0057	TN
+sone	G_SO1140	FP
+sone	G_SO1681	TN
+sone	G_SO3991	TN
+sone	G_SO2421	TN
+sone	G_SO0694	TN
+sone	G_SO3759	TN
+sone	G_SO2221	TN
+sone	G_SO1744	TN
+sone	G_SO4323	TN
+sone	G_SO0261	TN
+sone	G_SO1364	TN
 sone	G_SO0106	TN
-sone	G_SO0598	TN
-sone	G_SO0587	TN
-sone	G_SOA0159	TN
-sone	G_SO3144	TN
-sone	G_SO1520	TN
-sone	G_SO0600	TN
-sone	G_SO2363	TN
-sone	G_SO3392	TN
-sone	G_SO2911	TN
-sone	G_SO1680	TN
-sone	G_SO3980	TN
-sone	G_SO3602	TN
-sone	G_SO2477	TN
-sone	G_SO3496	TN
-sone	G_SO1070	TN
-sone	G_SO3747	TN
+sone	G_SO2643	TN
+sone	G_SO0859	TN
+sone	G_SO4600	TN
+sone	G_SO2592	TN
+sone	G_SO3904	TN
+sone	G_SO2390	TN
+sone	G_SO1363	TN
 sone	G_SO0590	FP
-sone	G_SO2420	TN
-sone	G_SO2398	TN
-sone	G_SO0922	TN
-sone	G_SO3089	TN
+sone	G_SO3705	TN
+sone	G_SO1910	FP
+sone	G_SO4503	TN
+sone	G_SO4357	TN
+sone	G_SO3778	TN
+sone	G_SO2068	TN
+sone	G_SO1018	TN
+sone	G_SO4232	TN
+sone	G_SO3695	TN
+sone	G_SO1016	TN
+sone	G_SO3413	TN
+sone	G_SO1770	TN
 sone	G_SO4510	TN
-sone	G_SO1115	TN
-sone	G_SO4509	TN
-sone	G_SO0630	TN
-sone	G_SO3506	TN
-sone	G_SO1206	TN
-sone	G_SO2390	TN
-sone	G_SO3966	TN
-sone	G_SO0811	TN
-sone	G_SO0441	TN
-sone	G_SO0917	TN
-sone	G_SO4702	TN
-sone	G_SO0313	TN
-sone	G_SO0849	TN
diff --git a/carveme/data/generated/bigg_gprs.csv.gz b/carveme/data/generated/bigg_gprs.csv.gz
index 3bfdf2c2e7e1443682fb7b81c27c78280fc98ce0..7674165267e968b8e101152b205270e8357d9de2 100644
GIT binary patch
delta 519961
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diff --git a/carveme/data/generated/gene_annotations.tsv.gz b/carveme/data/generated/gene_annotations.tsv.gz
index d5dc739e9142108c8de2d401d23f34d881e99c25..6f3142f5588b08ca731f77f29f85f0b44b54a31b 100644
GIT binary patch
delta 27
jcmdnKiEsNRK6d$T4vur%cQmrMvNN`_Gi_yOHkb(jk2nb!

delta 27
jcmdnKiEsNRK6d$T4vsbQ6^-nz?2N7KOk3HR4Q2uWfUpQ2

diff --git a/carveme/data/generated/model_specific_data.csv.gz b/carveme/data/generated/model_specific_data.csv.gz
index 6e41a55d405b6ac28f7c452f80a015e58b51ba38..8ade47882acfd88abec1de64f00937085cd43977 100644
GIT binary patch
delta 36
scmex5Me6GmDR%j84vw?icQmrMvNN`_Gqtiax3aUeva@bwXUppX0P*SzQ2+n{

delta 36
rcmex5Me6GmDR%j84vy9G6^-nz?2N7KOs(w9t?VqV?5tba+48yo+L#Jg

diff --git a/carveme/reconstruction/scoring.py b/carveme/reconstruction/scoring.py
index f9274f3..b8ae89f 100755
--- a/carveme/reconstruction/scoring.py
+++ b/carveme/reconstruction/scoring.py
@@ -96,7 +96,7 @@ def reaction_scoring(annotation, gprs, spontaneous_score=0.0, debug_output=None)
     gene_scores = pd.merge(gene2gene, gprs, how='right')
 
     # add default scores for spontaneous genes
-    spontaneous = {'G_s0001', 'G_S0001', 'G_s_0001', 'G_S_0001', 'G_KPN_SPONT'}
+    spontaneous = {'G_s0001', 'G_S0001', 'G_s_0001', 'G_S_0001', 'G_KPN_SPONT', 'G_PP_s0001'}
     gene_scores.loc[gene_scores.gene.isin(spontaneous), 'score'] = spontaneous_score
     gene_scores.loc[gene_scores.gene.isin(spontaneous), 'query_gene'] = 'spontaneous'
 
diff --git a/carveme/universe/download.py b/carveme/universe/download.py
index bf90101..1ffe332 100644
--- a/carveme/universe/download.py
+++ b/carveme/universe/download.py
@@ -183,7 +183,6 @@ def download_model_specific_data(outputfile, bigg_gprs, fastafile, annotations):
     create_gpr_table(df, bigg_gprs)
 
 
-
 def write_fasta(sequences, fastafile):
 
     with open(fastafile, 'w') as f:
@@ -215,7 +214,6 @@ def create_gpr_table(data, outputfile):
         pandas.DataFrame: GPR association table
     """
     rows = []
-    spontaneous = {'G_s0001', 'G_S0001', 'G_s_0001', 'G_S_0001', 'G_KPN_SPONT'}
 
     print("Print creating GPR table...")
 
@@ -231,7 +229,7 @@ def create_gpr_table(data, outputfile):
         if pd.notnull(gpr_str) and gpr_str != '':
             gpr = parse_gpr_rule(gpr_str, prefix='G_')
             for protein in gpr.proteins:
-                genes = sorted(set(protein.genes) - spontaneous)
+                genes = sorted(set(protein.genes))
                 p_id = 'P_' + '+'.join([gene[2:] for gene in genes])
                 for gene in genes:
                     rows.append((gene, p_id, r_id, model_id))
diff --git a/setup.py b/setup.py
index 164c7e2..5c6b11e 100644
--- a/setup.py
+++ b/setup.py
@@ -74,7 +74,7 @@
 
 setup(
     name='carveme',
-    version='1.5.0',
+    version='1.5.1',
     description="CarveMe: automated metabolic model reconstruction",
     long_description=readme,
     author="Daniel Machado",
