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teaching.Rmd
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teaching.Rmd
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###
###
## Teaching {.tabset .tabset-fade}
### Instruction
#### **Courses**
2024 **Short Course Co-Developer and Co-instructor**, [Data Science for Environmental Health (DaSEH) Short Course**](https://daseh.org/)
Funded by the National Institute of Environmental Health Sciences 1R25ES035590-01, Fred Hutchinson Cancer Center, Seattle, Washington (20 students)
2024 **Short Course Co-Developer and Co-instructor**, [Data Science for Environmental Health (DaSEH) Short Course](https://daseh.org/)
Funded by the National Institute of Environmental Health Sciences 1R25ES035590-01, Fred Hutchinson Cancer Center, Seattle, Washington (25 students)
2024 **Short Course Co-Developer and Co-instructor**,
[University of Washington Biostatistics Summer Institutes](https://si.biostat.washington.edu/), ["Data Wrangling"](https://github.com/SISBID/Data-Wrangling), Virtual (~40 students)
2024 **Course Co-developer and Co-instructor** - <span style="background-color: #FFFF00">rated as [excellent](https://publichealth.jhu.edu/offices-and-services/office-of-academic-affairs/faculty-recognition/excellence-in-teaching#Summer%20Institutes) by students</span>
[140.604.73 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Summer Institutes Term (28 students)
2024 **Course Co-developer and Co-instructor** - <span style="background-color: #FFFF00"> rated as [excellent](https://publichealth.jhu.edu/offices-and-services/office-of-academic-affairs/faculty-recognition/excellence-in-teaching).by students</span>
[140.604.79 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Winter Institutes Term (28 students)
2023 **Course Co-creator & Co-instructor** - not rated
[PH.140.840 – Baltimore Community Data Science](https://jhudatascience.org/Baltimore_Community_Course/), Virtual, Johns Hopkins Bloomberg School of Public Health 1st and 2nd Terms academic year 2023-2024 (Aug - Dec 2023) (9 students)
2023 **Short Course Co-Developer and Co-instructor**
[University of Washington Biostatistics Summer Institutes](https://si.biostat.washington.edu/), ["Data Wrangling"](https://github.com/SISBID/Data-Wrangling), Virtual (~40 students)
2023 **Course Co-developer and Co-instructor** - <span style="background-color: #FFFF00">rated as [excellent](https://publichealth.jhu.edu/offices-and-services/office-of-academic-affairs/faculty-recognition/excellence-in-teaching#Summer%20Institutes) by students</span>
[140.604.79 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Summer Institutes Term (38 students)
2023 **Course Co-developer and Co-instructor** - <span style="background-color: #FFFF00">rated as [excellent](https://publichealth.jhu.edu/offices-and-services/office-of-academic-affairs/faculty-recognition/excellence-in-teaching#Winter%20Institute) by students</span>
[140.604.73 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Winter Institutes Term (24 students)
2022 **Short Course Co-Developer and Co-instructor**
[University of Washington Biostatistics Summer Institutes](https://si.biostat.washington.edu/), ["Data Wrangling"](https://github.com/SISBID/Data-Wrangling), Virtual (49 students)
2022 **Course Co-developer and Co-instructor** - <span style="background-color: #FFFF00">rated as [excellent](https://publichealth.jhu.edu/offices-and-services/office-of-academic-affairs/faculty-recognition/excellence-in-teaching#summer%20institutes) by students</span>
[140.604.79 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Summer Institutes Term (41 students)
2022 **Course Co-creator & Co-instructor** - not rated
[PH.140.840 – Baltimore Community Data Science](https://jhudatascience.org/Baltimore_Community_Course/), Virtual, Johns Hopkins Bloomberg School of Public Health 3rd and 4th Terms academic year 2022-2023 (Jan - May 2022)(11 students)
2022 **Course Co-developer and Co-instructor** - <span style="background-color: #FFFF00">rated as [excellent](https://publichealth.jhu.edu/offices-and-services/office-of-academic-affairs/faculty-recognition/excellence-in-teaching/2021-2022) by students</span>
[140.604.73 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Winter Institutes Term (32 students)
2021 **Short Course Co-Developer and Co-instructor**
[University of Washington Biostatistics Summer Institutes](https://si.biostat.washington.edu/), ["Data Wrangling"](https://github.com/SISBID/Data-Wrangling), Virtual (approx 45 students)
2021 **Course Co-developer and Co-instructor**
[140.604.11 – Introduction to R for Public Health Researchers](https://github.com/jhudsl/intro_to_r), Virtual, Johns Hopkins Bloomberg School of Public Health Summer Institutes Term (34 students)
2019 **Course Developer and Course Instructor**
[Johns Hopkins Center for Talented Youth](https://cty.jhu.edu/), Baltimore, MD
“Introduction to Biomedical Sciences”
Designed and taught a full time two week course about Biomedical Sciences to high school students in Ajman in the United Arab Emirates including a significant lab portion of the course (approx 15 students)
2019 **Course Developer and Course Instructor**
[Johns Hopkins Center for Talented Youth](https://cty.jhu.edu/), Baltimore, MD
“Introduction to Biomedical Sciences”
Designed and taught a full time two week course about Biomedical Sciences to high school students in Abu Dhabi in the United Arab Emirates including a significant lab portion of the course (approx 15 students)
2005 **Class Instructor**
[Explora Science Center](https://www.explora.us/), Albuquerque, NM
Taught a variety of science courses to children age 3-12
***
#### **Workshops**
<!-- 2024 **Workshop Co-instructor** [ITCR Annual Meeting 2024](https://itcr2024.org/) - [ITCR Annual Meeting Trainee Workshop - Spatial Transcriptomics in collabroation with Oscar Ospina and Brook Fridely](https://hutchdatascience.org/ITN_Workshops_2024/), Indianapolis, Indiana (approx 20 learners) -->
<!-- 2024 **Workshop Co-instructor** [ITCR Annual Meeting 2024](https://itcr2024.org/) - [ITCR Annual Meeting Trainee Workshop - Containers](https://hutchdatascience.org/ITN_Workshops_2024/), Indianapolis, Indiana (approx 20 learners) -->
2024 **Workshop Co-developer and Co-instructor** [ITCR Annual Meeting 2024](https://itcr2024.org/) - [ITCR Annual Meeting Trainee Workshop - GitHub and Reproducibility 101](https://hutchdatascience.org/ITN_Workshops_2024/), Indianapolis, Indiana (approx 20 learners)
2024 **Workshop Co-developer and Co-instructor** [NIH, ITCR workshops](https://www.itcrtraining.org/events) Computing for Cancer Research, NYU, Bethesda, MD (approx 25 learners)
2024 **Workshop Co-developer and Co-instructor** [NYU, ITCR workshops](https://www.itcrtraining.org/events) [AI Ethics for Scientific Research](https://docs.google.com/presentation/d/1gFNEhfp4Vh131tpHvdntvpIKKwlJilaNfJLiMTeXvDA/edit?usp=sharing), NYU, New York City, New York (approx 25 learners)
2024 **Workshop Developer and Instructor** [NYU, ITCR workshops](https://www.itcrtraining.org/events) [Computing for Cancer Informatics](https://docs.google.com/presentation/d/1iQlW7yMfAGrv1cz-QfzQ5fUmTnsvQl1Kf_696v1ioUE/edit?usp=sharing), NYU, New York City, New York (approx 25 learners)
2024 **Workshop Developer and Instructor**, AI Considerations for research, Fred Hutchinson Cancer Center, Seattle Washington
2024 **Workshop Developer and Instructor**, Write Smarter with LaTeX and Overleaf, Fred Hutchinson Cancer Center, Seattle Washington
2023 **Workshop Co-developer and Co-instructor** [SeattleStatSummer Intro to R Workshop](https://hutchdatascience.org/SeattleStatSummer_R/), [Fred Hutchinson Cancer Center SeattleStatSummer Program](https://www.fredhutch.org/en/education-training/high-school-undergraduate-students/seattlestatsummer.html), Virtual, Seattle, Washington (11 students)
2023 **Workshop Developer and Instructor** [Fred Hutchinson Cancer Center, ITCR workshops](https://www.itcrtraining.org/events) [Multidisciplinary teams for Cancer Informatics](https://docs.google.com/presentation/d/19Z_yZ1HPsGewR2EgykGr5skpjI8vQvM5anc7-wdsTug/edit?usp=sharing), Seattle, Washington (approx 15 learners)
2023 **Workshop Developer and Instructor** [Fred Hutchinson Cancer Center ITCR workshops](https://www.itcrtraining.org/events) [Computing for Cancer Informatics](https://docs.google.com/presentation/d/1lq4NsjfMAuoSAONNXw5JcrP4j5P1z_2sNJJnqXDkxdQ/edit?usp=sharing), Seattle, Washington (approx 15 learners)
2023 **Workshop Co-developer and Co-instructor** [ITCR Annual Meeting 2023](https://itcr2023.org/) - [ITCR Annual Meeting Trainee Workshop - GitHub 101](https://docs.google.com/presentation/d/1Mn5X3itSuAh9zuzy_1ibSWYEcyjrm897p8MF8TGbmHk/edit?usp=sharing), Chicago, Illinois (approx 20 learners)
2022 **Workshop Developer and Co-instructor** [Translational Genomics Research Institute (TGEN)](https://www.tgen.org/) - [Leveraging Resources for Your Bioinformatics Analyses (Including Galaxy Introduction)](https://docs.google.com/presentation/d/1GH7b7bLy0NwY3Z_zs5i-5LwkqMCXzh56CGoJgJta8tU/edit?usp=sharing), Phoenix, Arizona (6 learners)
2023 **Workshop Co-developer and Co-instructor** [Great Lakes Bioinformatics Conference 2023](https://www.iscb.org/glbio2023) - [Using reproducibility techniques and version control to improve daily bioinformatics research practices and publish scientific websites with R](https://docs.google.com/presentation/d/1bxu8Tn9dDQgybjPj17V9z4IwNmFwPW_CEqsq82w-mlY/edit?usp=sharing), McGill University, Montreal, Quebec, Canada (7 learners)
2022 **Workshop Developer and Instructor** [ITCR Annual Meeting 2022](https://itcr2022.org/) - [ITCR Annual Meeting Trainee Workshop](https://docs.google.com/presentation/d/1miG53JFj9JzQoEXFz8_QRQSQCmWtcvH8ibGykg-CYGM/edit?usp=sharing), Washington University School of Medicine in St Louis, Missouri (15 learners)
2020 **Workshop Developer and Instructor**
[R-Ladies Baltimore](https://www.meetup.com/rladies-baltimore/events/263289042/), Virtual
["Wrangling a pdf with stringr"](https://carriewright11.github.io/stringr_RLadies/) (approx 40 attendees)
2020 **Workshop Instructor**
[Johns Hopkins Center for Talented Youth](https://cty.jhu.edu/), Baltimore, MD
“Research and Data Science”
Designed and taught a workshop about Research and R programming to South Korean high school students in Baltimore (approx 12 students)
2017 **Workshop Instructor**
[Baltimore Underground Science Space](http://www.bugssonline.org/), Baltimore, MD
“Adventures in BIG DATA Analysis"
Designed and taught a course on data analysis using R (approx 20 students)
***
#### **Citizen Science Events**
2023 **Co-developer and Co-Instructor/Facilitator**
["What’s informatics and how do we use it to fight cancer?"](https://docs.google.com/presentation/d/1Km_Cn2wI2Fpz-kmC5yaDWxhUVWYvxmYXupVKJdhtMf4/edit?usp=sharing), [ITCR event](https://www.itcrtraining.org/events) in partnership with the University of Illinois, Chicago, Project Brotherhood, and Morehouse School of Medicine. Atlanta, Georgia (approx 20 attendees)
2022 **Co-developer and Co-Instructor/Facilitator**
["What’s informatics and how do we use it to fight cancer?"](https://docs.google.com/presentation/d/1Km_Cn2wI2Fpz-kmC5yaDWxhUVWYvxmYXupVKJdhtMf4/edit?usp=sharing), [ITCR event](https://www.itcrtraining.org/events) in partnership with the University of Illinois, Chicago and Project Brotherhood. Virtual (approx 20 attendees)
***
#### **Assisting and Tutoring**
2023 **Workshop Assistant** [Fred Hutchinson Cancer Center ITCR Workshops](https://www.itcrtraining.org/events), [AI for Software and Analysis Development](https://docs.google.com/presentation/d/1Qz8aK0RcT-UVvIb6qy2X6f_ke9D_MGsiFXaD0TNcPc8/edit?usp=sharing) Seattle, Washington (approx 6 learners)
2023 **Workshop Assistant** [Fred Hutchinson Cancer Center ITCR Workshops](https://www.itcrtraining.org/events), [Choosing Genomics Tools (including UCSC Xena Browser introduction)](https://docs.google.com/presentation/d/1-ujn_E4Svjc7uqocydKInN5t1X5FNMHcoWx17gPYaAE/edit?usp=sharing) Seattle, Washington (approx 15 learners)
2018 **Teaching Assistant**
[Baltimore Underground Science Space](http://www.bugssonline.org/), Baltimore, MD
“R you interested in big data analysis?”
Assisted with R programming analysis one-on-one with students
2018 **Teaching Assistant**
[Baltimore Underground Science Space](http://www.bugssonline.org/), Baltimore, MD
“Go with your guts! (And the billions of bacteria in them): A personal microbiome course”
Assisted with R programming analysis one-on-one with students
2013 **Teaching Assistant**
[Department of Neurosciences, University of New Mexico](https://hsc.unm.edu/medicine/departments/neurosciences/), Albuquerque, NM
“Introduction to Neurobiology”, Biomed 509 taught by Donald Partridge, Ph.D.
Assisted with grading, class organization, and discussions
2007 **Student Tutor**
[Department of Chemistry, University of New Mexico](https://chemistry.unm.edu/), Albuquerque, NM
“Organic Chemistry”, Chem 301 taught by Lisa Whalen, Ph.D.
Tutored two undergraduate students
### Case Studies
1) [Exploring global patterns of obesity across rural and urban regions (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-rural-and-urban-obesity/)
Wright, Carrie and Jager, Leah and Taub, Margaret and Hicks, Stephanie. (2020).
https://github.com/opencasestudies/ocs-bp-rural-and-urban-obesity
<p style="text-align:center;"> <img src="https://raw.githubusercontent.com/opencasestudies/ocs-bp-rural-and-urban-obesity/master/img/main_plot.png" width="500" /> </p>
2) [Predicting Annual Air Pollution (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-air-pollution/)
Wright, Carrie and Jager, Leah and Taub, Margaret and Hicks, Stephanie. (2020).
https://github.com//opencasestudies/ocs-bp-air-pollution
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-air-pollution/blob/master/img/main_plot_maps.png?raw=true" width="500" /></p>
3) [Vaping Behaviors in American Youth (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-vaping-case-study/)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie.(2020).
https://github.com/opencasestudies/ocs-bp-vaping-case-study
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-vaping-case-study/blob/master/img/final_plot.png?raw=true" width="500" /></p>
4) [Opioids in the United States (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-opioid-rural-urban/)
Wright, Carrie and Wang, Kexin and Jager, Leah and Taub, Margaret and Hicks, Stephanie. (2020).
https://github.com/opencasestudies/ocs-bp-opioid-rural-urban
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-opioid-rural-urban/blob/master/img/mainplot.png?raw=true" width="500" /></p>
5) [Influence of Multicollinearity on Measured Impact of Right-to-Carry Gun Laws Part 1 (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-RTC-wrangling)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie.(2020).
https://github.com/opencasestudies/ocs-bp-RTC-wrangling
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-RTC-wrangling/blob/master/img/mainplot.png?raw=true" width="500" /></p>
6) [Influence of Multicollinearity on Measured Impact of Right-to-Carry Gun Laws (Version v1.0.0)](https://www.opencasestudies.org/ocs-bp-RTC-analysis)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie.(2020).
https://github.com//opencasestudies/ocs-bp-RTC-analysis
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-RTC-wrangling/blob/master/img/mainplot.png?raw=true" width="500" /></p>
7) [Disparities in Youth Disconnection](https://www.opencasestudies.org/ocs-bp-youth-disconnection)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie. (2020).
https://github.com/opencasestudies/ocs-youth-disconnection-case-study
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-youth-disconnection/blob/master/img/mainplot.png?raw=true" width="500" /></p>
8) [Mental Health of American Youth](https://www.opencasestudies.org/ocs-bp-youth-mental-health)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie. (2020).
https://github.com/opencasestudies/ocs-bp-youth-mental-health
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-youth-mental-health/blob/master/img/mainplot.png?raw=true" width="500" /></p>
9) [School Shootings in the United States (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-school-shootings-dashboard)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie.(2020).
https://github.com//opencasestudies/ocs-bp-school-shootings-dashboard
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-school-shootings-dashboard/blob/master/img/main_plot.png?raw=true" width="500" /></p>
10) [Exploring CO2 emissions across time (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-co2-emissions)
Wright, Carrie and Ontiveros, Michael and Jager, Leah and Taub, Margaret and Hicks, Stephanie.(2020).
(https://github.com/opencasestudies/ocs-bp-co2-emissions)
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-co2-emissions/blob/master/img/mainplot.png?raw=true" width="500" /></p>
11) [Exploring global patterns of dietary behaviors associated with health risk (Version v1.0.0).](https://www.opencasestudies.org/ocs-bp-diet)
Wright, Carrie and Jager, Leah and Taub, Margaret and Hicks, Stephanie. (2020).
https://github.com/opencasestudies/ocs-bp-diet
<p style="text-align:center;"> <img src="https://github.com/opencasestudies/ocs-bp-diet/blob/master/img/mainplot.png?raw=true" width="500" /></p>
### Books
2022 **An Educator’s Guide to the Open Case Studies**, Carrie Wright, Michael Breshock, Lyla Atta, and Stephanie Hicks. https://leanpub.com/opencasestudies_guide
<p style="text-align:center;"> <img src="https://d2sofvawe08yqg.cloudfront.net/opencasestudies_guide/s_hero2x?1648052951" width="300" /></p>
2020 **Tidyverse Skills for Data Science in R**, Carrie Wright, Shannon Ellis, Stephanie Hicks, and Roger D. Peng. https://leanpub.com/tidyverseskillsdatascience
<p style="text-align:center;"> <img src="https://d2sofvawe08yqg.cloudfront.net/tidyverseskillsdatascience/hero2x?1612295938" width="300" /></p>
##### Book image created by [Jessica Crowell](https://www.linkedin.com/in/jessica-crowell-b129b451/)
### Online Courses
2024 -[**Avoiding AI Harm**](https://hutchdatascience.org/AI_for_Decision_Makers/introduction-to-avoiding-ai-harm.html) on [Coursera](https://www.coursera.org/learn/avoiding-ai-harm) as part of a larger collaborative course called [**AI for Decision Makers**](https://hutchdatascience.org/AI_for_Decision_Makers/) as a specialization also on [Coursera](https://www.coursera.org/learn/ai-for-decision-makers)
```{r, echo = FALSE, fig.align='center', out.width="30%"}
knitr::include_graphics("images/robotmaze.png")
```
<p> <small> Image created with https://poe.com/StableDiffusionXL </small> </p>
2023 - [**AI for Efficient Programming**](https://hutchdatascience.org/AI_for_Efficient_Programming/) on [Coursera](https://www.coursera.org/learn/ai-for-software-development) and [Leanpub](https://leanpub.com/courses/fredhutch/ai_for_software)
```{r, echo = FALSE, fig.align='center', out.width="60%"}
knitr::include_graphics("images/ai_eff_what.png")
```
```{r, echo = FALSE, fig.align='center', out.width="50%"}
knitr::include_graphics("images/ai_eff_who.png")
```
2023 - [**Ethical Data Handling**](https://hutchdatascience.org/Ethical_Data_Handling_for_Cancer_Research/) on [Leanpub](https://leanpub.com/courses/fredhutch/ethical_data_handling/)
```{r, echo = FALSE, fig.align='center', out.width="60%"}
knitr::include_graphics("images/ethical_what.png")
```
```{r, echo = FALSE, fig.align='center', out.width="50%"}
knitr::include_graphics("images/ethical_who.png")
```
2023 - [**Introduction to LaTeX and Overleaf for Scientific Articles**](https://hutchdatascience.org/Overleaf_and_LaTeX_for_Scientific_Articles) on [Leanpub](https://leanpub.com/courses/fredhutch/overleaf_intro)
```{r, echo = FALSE, fig.align='center', out.width="60%"}
knitr::include_graphics("images/latex_what.png")
```
```{r, echo = FALSE, fig.align='center', out.width="50%"}
knitr::include_graphics("images/latex_who.png")
```
2023 - [**NIH Data Sharing**](https://hutchdatascience.org/NIH_Data_Sharing/) on [Leanpub](https://leanpub.com/courses/fredhutch/nih_data_sharing)
```{r, echo = FALSE, fig.align='center', out.width="60%"}
knitr::include_graphics("images/nih_what.png")
```
```{r, echo = FALSE, fig.align='center', out.width="50%"}
knitr::include_graphics("images/nih_who.png")
```
2022 - [**Computing for Cancer Informatics**](https://jhudatascience.org/Computing_for_Cancer_Informatics/) on [Coursera](https://www.coursera.org/learn/computing-for-cancer-informatics/) and [Leanpub](https://leanpub.com/universities/courses/jhu/cancer-informatics-computing)
```{r, echo = FALSE, fig.align='center'}
knitr::include_graphics("images/computing.png")
```
```{r, echo = FALSE, fig.align='center'}
knitr::include_graphics("images/computing_who.png")
```
2021 - [**Leadership for Cancer Informatics Research**](https://jhudatascience.org/Informatics_Research_Leadership/) on [Coursera](https://www.coursera.org/learn/leadership-for-cancer-informatics-research) and [Leanpub](https://leanpub.com/universities/courses/jhu/cancer-informatics-for-research-leaders)
```{r, echo = FALSE, fig.align='center'}
knitr::include_graphics("images/leadership.png")
```
```{r, echo = FALSE, fig.align='center'}
knitr::include_graphics("images/leadership_who.png")
```
2020 - [**Tidyverse Skills for Data Science in R Specialization**, Carrie Wright, Shannon Ellis, Stephanie Hicks, and Roger D. Peng.](https://www.coursera.org/specializations/tidyverse-data-science-r)
<p style="text-align:center;"> <img src="https://d3njjcbhbojbot.cloudfront.net/api/utilities/v1/imageproxy/https://d15cw65ipctsrr.cloudfront.net/c5/522e22e9ca4b579919f68341759e5c/Tidyverse.png?auto=format%2Ccompress&dpr=2&w=150&h=150&fit=fill&bg=FFF" width="300" /></p>
Including:
1) [Introduction to the Tidyverse](https://www.coursera.org/learn/tidyverse?specialization=tidyverse-data-science-r) <img src="https://d3njjcbhbojbot.cloudfront.net/api/utilities/v1/imageproxy/https://s3.amazonaws.com/coursera-course-photos/4c/fd661c15034da2a9a2eeaab6673ca3/Tidyverse-Introduction.png?auto=format%2Ccompress&dpr=2&w=150&h=150&q=40&fit=fill&bg=FFF" width="100" /> 2. [Importing Data in the Tidyverse](https://www.coursera.org/learn/tidyverse-importing-data?specialization=tidyverse-data-science-r) <img src="https://d3njjcbhbojbot.cloudfront.net/api/utilities/v1/imageproxy/https://s3.amazonaws.com/coursera-course-photos/ea/a0546c0f1f4593ae9671a21c924a5a/Tidyverse-Importing.png?auto=format%2Ccompress&dpr=2&w=150&h=150&fit=fill&bg=FFF" width="100" /> 3. [Wrangling Data in the Tidyverse](https://www.coursera.org/learn/tidyverse-data-wrangling?specialization=tidyverse-data-science-r) <img src="https://d3njjcbhbojbot.cloudfront.net/api/utilities/v1/imageproxy/https://s3.amazonaws.com/coursera-course-photos/3f/ccacb8d4ba4c2fa8ba919b6c81ac73/Tidyverse-Wrangling.png?auto=format%2Ccompress&dpr=2&w=150&h=150&fit=fill&bg=FFF" width="100" /> 4. [Visualizing Data in the Tidyverse](https://www.coursera.org/learn/tidyverse-visualize-data?specialization=tidyverse-data-science-r) <img src="https://d3njjcbhbojbot.cloudfront.net/api/utilities/v1/imageproxy/https://s3.amazonaws.com/coursera-course-photos/ae/0d03e562cd4507a40fb04aba28a2c2/Tidyverse-Visualizing.png?auto=format%2Ccompress&dpr=2&w=150&h=150&q=40&fit=fill&bg=FFF" width="100" /> 5. [Modeling Data in the Tidyverse](https://www.coursera.org/learn/tidyverse-modelling-data) <img src="https://d3njjcbhbojbot.cloudfront.net/api/utilities/v1/imageproxy/https://s3.amazonaws.com/coursera-course-photos/e4/59b84597944b43b12d84a3534c5942/Tidyverse-Modeling.png?auto=format%2Ccompress&dpr=2&w=150&h=150&q=40&fit=fill&bg=FFF" width="100" />
##### Course images created by [Jessica Crowell](https://www.linkedin.com/in/jessica-crowell-b129b451/)
### Mentorship
#### **Academic Advisees**
- Capstone Advisor for [Logan, Eean](https://www.linkedin.com/in/eeanthomas/). Master of Public Health. Johns Hopkins Bloomber School of Public Health, Baltimore, MD (2022).
- Thesis Advisor for [Breshock, Michael](https://mbreshock.github.io/). Master of Science in Engineering, Biomedical Engineering. Johns Hopkins University, Baltimore, MD (2020 - 2021).[Thesis Link](https://jscholarship.library.jhu.edu/handle/1774.2/66820).
#### **Research Advisees**
- [Isaac, Kate](https://kweav.github.io/). Postdoctoral Fellow. Fred Hutchinson Cancer Center, Seattle, WA (2023 - Present). Co-supervised with Jeff Leek
- [Jainaba, Jawara](https://www.linkedin.com/in/jainaba-jawara570/). Undergraduate Student Intern. University of Washington, Seattle, WA (2023). *Co-supervised with Ava Hoffman on a research project and poster as part of the [SeattleStatSummer](https://www.fredhutch.org/en/education-training/high-school-undergraduate-students/seattlestatsummer.html) program at the [Fred Hutchinson Cancer Center](https://www.fredhutch.org/).*
- [Afiaz, Awan](https://www.biostat.washington.edu/people/awan-afiaz). Graduate Research Assistant. Doctorate of Biostatistics. University of Washington, Seattle, WA (2023). (Served as co-supervisor with Jeff Leek.)
- [Hwang, Jimin](https://www.linkedin.com/in/jimin-hwang-549835142). Graduate Research Assistant. Master of Public Health. Johns Hopkins University, Baltimore, MD (2022). _Worked with Jimin to create scientific communication cartoons._
- [Rout, Pratik](https://www.linkedin.com/in/pratik-rout-b524901a5/). Graduate Research Assistant. Master of Science, Bioinformatics. Johns Hopkins University, Baltimore, MD (2022). _Mentored Pratik to create interactive tables for ITCR tools._
- [Atta, Lyla](https://lylaatta.github.io/). Graduate Research Assistant. Doctor of Philosophy, Biomedical Engineering. Johns Hopkins University, Baltimore, MD (2021 - 2022). _Mentored Lyla as we created a guide for instruction with our case studies._
- [Breshock, Michael](ttps://mbreshock.github.io/). Research Assistant. (Not in a degree program at the time - just graduated with Master of Science in Engineering degree), Department of Biostatistics. Johns Hopkins Bloomberg School of Public Health, Baltimore, MD (2021 - 2022). _Mentored Michael to create OCSdata R package and to create other case study tools and resources, as well as perform research on case study usage._
- [Meng, Qier](https://www.linkedin.com/in/qiermeng/). Graduate Research Assistant. Master of Science, Biostatistics. Johns Hopkins Bloomberg School of Public Health, Baltimore, MD (2020 - 2021). _Mentored Qier, as she made case studies interactive._
- [Ontiveros, Michael](https://www.michaelontiveros.com/). Graduate Research Assistant. Master of Health Sciences, Epidemiology. Johns Hopkins Bloomberg School of Public Health, Baltimore, MD (2020). _Worked with Michael to create case studies._
- [Rajpurohit, Nina](https://www.linkedin.com/in/nina-rajpurohit-a144121b1/). Research Associate. Lieber Institute for Brain Development, Baltimore, MD (2017). _Trained and guided Nina through a gene expression research project._
- [Brusilovsky, Jane](https://www.linkedin.com/in/janebrusilovsky/). Undergraduate Student Researcher. Bachelors of Science, Bioengineering. Lieber Institute for Brain Development, Baltimore, MD (2017). _Trained and guided Jane through a gene expression research project._
- [Astorga, Daniel](https://www.linkedin.com/in/astorgamha/). Undergraduate Student Researcher. Bachelors of Science, Biology. The Mind Research Network, Albuquerque, NM (2013). _Trained and guided Daniel through an imaging genetics research project._
#### **Thesis Committees/Thesis Reader**
- [Breshock, Michael](https://mbreshock.github.io/). Master of Science in Engineering. Biomedical Engineering, Johns Hopkins Whiting School of Engineering, Baltimore, MD.
Thesis entitled "Expanding Access and Removing Barriers: Data Science Education with the Open Case Studies Digital Platform" (2020-2021).
- [Michael Patrick Geaghan](https://www.researchgate.net/profile/Michael-Geaghan). International Doctoral Thesis Examiner.
Thesis entitled "Characterising Transcriptional Perturbations Arising from Altered Expression of Schizophrenia-Associated MicroRNA" for the School of Biomedical Sciences and Pharmacy, University of Newcastle, Australia (2019).