From 82622e0127610f1caed1a37e512e2361e63064ad Mon Sep 17 00:00:00 2001
From: Alex Kotlar <akotlar@bu.edu>
Date: Wed, 23 Oct 2024 21:20:13 -0400
Subject: [PATCH] don't try to cleanup; won't work anyway

---
 conf/main.config             | 1 -
 conf/main_with_beagle.config | 1 -
 2 files changed, 2 deletions(-)

diff --git a/conf/main.config b/conf/main.config
index 330f1ed..698d997 100644
--- a/conf/main.config
+++ b/conf/main.config
@@ -29,5 +29,4 @@ params {
     phasing = [
         engine: "eagle",
     ]
-    cleanup = true
 }
\ No newline at end of file
diff --git a/conf/main_with_beagle.config b/conf/main_with_beagle.config
index c944c2d..a2f639d 100644
--- a/conf/main_with_beagle.config
+++ b/conf/main_with_beagle.config
@@ -30,5 +30,4 @@ params {
         engine: "beagle",
         impute: true
     ]
-    cleanup = true
 }
\ No newline at end of file