diff --git a/travis/build-dx.sh b/travis/build-dx.sh index 95a4a04eb..d60ab13fd 100755 --- a/travis/build-dx.sh +++ b/travis/build-dx.sh @@ -24,15 +24,6 @@ for workflow in pipes/WDL/workflows/*.wdl; do workflow_name=`basename $workflow .wdl` echo "Building $workflow to DNAnexus: /build/$VERSION/$workflow_name" - test_input_json_wdl="test/input/WDL/test_inputs-$workflow_name-dnanexus.json" - if [ -f "$test_input_json_wdl" ]; then - CMD_INPUT="-inputs $test_input_json_wdl" - # blank this out until we're sure we want to test it this way... - CMD_INPUT="" - else - CMD_INPUT="" - fi - defaults_json="pipes/dnax/dx-defaults-$workflow_name.json" if [ -f "$defaults_json" ]; then CMD_DEFAULTS="-defaults $defaults_json" @@ -44,7 +35,8 @@ for workflow in pipes/WDL/workflows/*.wdl; do CMD_DEFAULTS+=" -extras $extras_json" dx_id=$(java -jar dxWDL.jar compile \ - $workflow $CMD_INPUT $CMD_DEFAULTS -f -verbose \ + $workflow $CMD_DEFAULTS -f -verbose \ + -leaveWorkflowsOpen \ -imports pipes/WDL/tasks/ \ -project $DX_PROJECT \ -destination /build/$VERSION/$workflow_name) diff --git a/travis/dockstoreyml.sh b/travis/dockstoreyml.sh index dad47cd33..a1abb2944 100755 --- a/travis/dockstoreyml.sh +++ b/travis/dockstoreyml.sh @@ -7,4 +7,6 @@ for WDL in $*; do echo " - name: $(basename $WDL .wdl)" echo " subclass: WDL" echo " primaryDescriptorPath: $WDL" + echo " testParameterFiles:" + echo " - empty.json" done