Skip to content

Actions: broadinstitute/viral-pipelines

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
1,333 workflow runs
1,333 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

the genbank workflow now hits live NCBI databases -- remove it from C… viral-pipelines CI #2574: Commit 425a4db pushed by dpark01
September 18, 2024 20:20 26m 23s dp-scaffold
dp-scaffold
September 18, 2024 20:20 26m 23s
Merge pull request #555 from broadinstitute/dp-demux viral-pipelines CI #2573: Commit 55c81a0 pushed by dpark01
September 18, 2024 20:19 27m 52s master
master
September 18, 2024 20:19 27m 52s
Push on master CodeQL #86: by github-advanced-security bot
September 18, 2024 20:19 2m 14s
September 18, 2024 20:19 2m 14s
demux_deplete fixes/updates viral-pipelines CI #2572: Pull request #555 opened by dpark01
September 18, 2024 14:22 33m 26s dp-demux
dp-demux
September 18, 2024 14:22 33m 26s
PR #555 CodeQL #85: by dpark01
September 18, 2024 14:22 2m 16s
September 18, 2024 14:22 2m 16s
PR #554 CodeQL #84: by dpark01
September 18, 2024 14:21 1m 43s
September 18, 2024 14:21 1m 43s
scaffold multitaxa: drop empty assembly output rows viral-pipelines CI #2571: Pull request #554 opened by dpark01
September 18, 2024 14:21 26m 25s dp-scaffold
dp-scaffold
September 18, 2024 14:21 26m 25s
the genbank workflow now hits live NCBI databases -- remove it from C… viral-pipelines CI #2570: Commit 3a50994 pushed by dpark01
September 18, 2024 13:56 25m 47s dp-scaffold
dp-scaffold
September 18, 2024 13:56 25m 47s
drop zero length assemblies viral-pipelines CI #2569: Commit 9017298 pushed by dpark01
September 18, 2024 13:22 28m 13s dp-scaffold
dp-scaffold
September 18, 2024 13:22 28m 13s
missing python import viral-pipelines CI #2568: Commit f6942c3 pushed by dpark01
September 18, 2024 13:15 28m 9s dp-demux
dp-demux
September 18, 2024 13:15 28m 9s
bugfix for when many previous libraries exist viral-pipelines CI #2567: Commit e39c7d1 pushed by dpark01
September 17, 2024 20:13 33m 10s dp-demux
dp-demux
September 17, 2024 20:13 33m 10s
Scheduled CodeQL #83: by github-advanced-security bot
September 13, 2024 12:02 1m 46s
September 13, 2024 12:02 1m 46s
Scheduled CodeQL #82: by github-advanced-security bot
September 6, 2024 12:02 1m 46s
September 6, 2024 12:02 1m 46s
oops viral-pipelines CI #2566: Commit 4eb51c2 pushed by dpark01
September 5, 2024 21:19 26m 46s dp-genbank
dp-genbank
September 5, 2024 21:19 26m 46s
add new outputs to assembly table: assembly_method_version, biosample… viral-pipelines CI #2565: Commit 2137472 pushed by dpark01
September 5, 2024 21:12 2m 52s dp-genbank
dp-genbank
September 5, 2024 21:12 2m 52s
oops: add actual workflow viral-pipelines CI #2564: Commit f6d2105 pushed by dpark01
September 5, 2024 14:04 28m 9s dp-genbank
dp-genbank
September 5, 2024 14:04 28m 9s
initial layout of genbank_single workflow viral-pipelines CI #2563: Commit cd041ac pushed by dpark01
September 5, 2024 14:03 28m 7s dp-genbank
dp-genbank
September 5, 2024 14:03 28m 7s
drop members from sample table if empty cleaned bam viral-pipelines CI #2562: Commit 6f8b0ae pushed by dpark01
September 5, 2024 13:03 27m 24s dp-demux
dp-demux
September 5, 2024 13:03 27m 24s
Merge pull request #552 from broadinstitute/dp-demux viral-pipelines CI #2561: Commit 7bbfee4 pushed by dpark01
September 5, 2024 12:55 30m 13s dp-genbank
dp-genbank
September 5, 2024 12:55 30m 13s
Scheduled CodeQL #81: by github-advanced-security bot
August 30, 2024 12:02 2m 21s
August 30, 2024 12:02 2m 21s
PR #553 CodeQL #80: by tomkinsc
August 23, 2024 23:29 1m 44s
August 23, 2024 23:29 1m 44s
attempt at fixing OpenBLAS-related nproc limit viral-pipelines CI #2560: Pull request #553 synchronize by tomkinsc
August 23, 2024 23:29 27m 56s ct-bugfix-depletion-nproc-limit
ct-bugfix-depletion-nproc-limit
August 23, 2024 23:29 27m 56s
set export OPENBLAS_NUM_THREADS=1 in fastqc task viral-pipelines CI #2559: Commit cf704e8 pushed by tomkinsc
August 23, 2024 23:29 27m 51s ct-bugfix-depletion-nproc-limit
ct-bugfix-depletion-nproc-limit
August 23, 2024 23:29 27m 51s
PR #553 CodeQL #79: by tomkinsc
August 23, 2024 23:05 1m 41s
August 23, 2024 23:05 1m 41s
attempt at fixing OpenBLAS-related nproc limit viral-pipelines CI #2558: Pull request #553 synchronize by tomkinsc
August 23, 2024 23:05 27m 52s ct-bugfix-depletion-nproc-limit
ct-bugfix-depletion-nproc-limit
August 23, 2024 23:05 27m 52s