From fef2d2c92b24e68b65f3725977f61b919376d355 Mon Sep 17 00:00:00 2001 From: Chris Tomkins-Tinch Date: Fri, 31 Jan 2025 12:09:31 -0500 Subject: [PATCH] viral-core container Dockerfile: bump viral-baseimage 0.2.3 -> 0.2.4 (#117) * viral-core container Dockerfile: bump viral-baseimage 0.2.3 -> 0.2.4 * s/conda create/mamba create/ --- Dockerfile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Dockerfile b/Dockerfile index 2b6fcd1d..f3512468 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,4 +1,4 @@ -FROM quay.io/broadinstitute/viral-baseimage:0.2.3 +FROM quay.io/broadinstitute/viral-baseimage:0.2.4 LABEL maintainer "viral-ngs@broadinstitute.org" @@ -28,7 +28,7 @@ ENV \ # Set it up so that this slow & heavy build layer is cached # unless the requirements* files or the install scripts actually change WORKDIR $INSTALL_PATH -RUN conda create -n $CONDA_DEFAULT_ENV python=3.10 +RUN mamba create -n $CONDA_DEFAULT_ENV python=3.10 RUN echo "source activate $CONDA_DEFAULT_ENV" > ~/.bashrc RUN hash -r COPY docker $VIRAL_NGS_PATH/docker/