@HD VN:1.6 SO:coordinate @SQ SN:test_reference LN:8 @RG ID:1 LB:my_lib PL:Illumina SM:my_sample PU:my_unit @PG ID:samtools PN:samtools VN:1.18 CL:samtools sort -o test_sorted.sam test.sam read_1 16 test_reference 1 255 8M * 0 0 ACGTACGT ~~~~~~~~ RG:Z:1 read_1_again 16 test_reference 1 255 8M * 0 0 ACGTACGT ~~~~~~~~ RG:Z:1 read_3 16 test_reference 1 255 7M1S * 0 0 ACGTACGA ~~~~~~~~ RG:Z:1 read_6 16 test_reference 1 255 7M * 0 0 ACGTACG ~~~~~~~ RG:Z:1 read_2 16 test_reference 2 255 1S7M * 0 0 CCGTACGT ~~~~~~~~ RG:Z:1 read_4 16 test_reference 2 255 1S6M1S * 0 0 CCGTACGA ~~~~~~~~ RG:Z:1 read_5 16 test_reference 2 255 7M * 0 0 CGTACGT ~~~~~~~ RG:Z:1 read_7 16 test_reference 2 255 6M * 0 0 CGTACG ~~~~~~ RG:Z:1