some HTML tags do not get stripped from arguments.

[yfarjoun]

in particular it seems that if a clpEnum description has html tags, (example <b>strong</b> ) only the first is removed and the CL --help will contain the latter:

from the new FilterSamReads:

FILTER=Filter                 Which filter to use.  Required. Possible values: {
                              includeAligned (Aligned reads only.
                              INPUT SAM/BAM must be in queryname SortOrder. (Note: first and second of paired reads must
                              both</b> be aligned to be included in OUTPUT.))
                              excludeAligned (Unaligned reads only.
                              INPUT SAM/BAM must be in queryname SortOrder. (Note: first and second of pair must
                              both</b> be aligned to be excluded from  OUTPUT.))
                              includeReadList (Reads whose queryname
                              is in READ_LIST_FILE.)