forked from MI-DPLA/combine
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathviews.py
2091 lines (1515 loc) · 53.7 KB
/
views.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
# -*- coding: utf-8 -*-
from __future__ import unicode_literals
import hashlib
import json
import logging
from lxml import etree, isoschematron
import os
import re
import requests
import textwrap
import time
from urllib.parse import urlencode
import uuid
from django.conf import settings
from django.contrib.auth.decorators import login_required
from django.core import serializers
from django.core.files.uploadedfile import InMemoryUploadedFile, TemporaryUploadedFile
from django.core.urlresolvers import reverse
from django.db.models import Q
from django.http import HttpResponse, JsonResponse
from django.shortcuts import render, redirect
from django.views import View
# import models
from core import models, forms
from core.es import es_handle
# import oai server
from core.oai import OAIProvider
# import background tasks
from core import tasks
# django-datatables-view
from django_datatables_view.base_datatable_view import BaseDatatableView
# Get an instance of a logger
logger = logging.getLogger(__name__)
# Set logging levels for 3rd party modules
logging.getLogger("requests").setLevel(logging.WARNING)
# breadcrumb parser
def breadcrumb_parser(path):
'''
Rudimentary breadcrumbs parser
'''
crumbs = []
# livy/spark
config_m = re.match(r'(.+?/livy_sessions)', path)
if config_m:
crumbs.append(("<span class='font-weight-bold'>Livy/Spark</span>", reverse('livy_sessions')))
# configurations
config_m = re.match(r'(.+?/configuration)', path)
if config_m:
crumbs.append(("<span class='font-weight-bold'>Configuration</span>", reverse('configuration')))
# configurations/test_validation_scenario
config_m = re.match(r'(.+?/configuration/test_validation_scenario)', path)
if config_m:
crumbs.append(("<span class='font-weight-bold'>Test Validation Scenario</span>", reverse('test_validation_scenario')))
# all jobs
config_m = re.match(r'(.+?/jobs/all)', path)
if config_m:
crumbs.append(("<span class='font-weight-bold'>All Jobs</span>", reverse('all_jobs')))
# analysis
config_m = re.match(r'(.+?/analysis)', path)
if config_m:
crumbs.append(("<span class='font-weight-bold'>Analysis</span>", reverse('analysis')))
# published
pub_m = re.match(r'(.+?/published)', path)
if pub_m:
crumbs.append(("<span class='font-weight-bold'>Published</span>", reverse('published')))
# organization
pub_m = re.match(r'(.+?/organization/.*)', path)
if pub_m:
crumbs.append(("<span class='font-weight-bold'>Organizations</span>", reverse('organizations')))
# org
org_m = re.match(r'(.+?/organization/([0-9]+))', path)
if org_m:
org = models.Organization.objects.get(pk=int(org_m.group(2)))
if org.for_analysis:
logger.debug("breadcrumbs: org is for analysis, converting breadcrumbs")
crumbs.append(("<span class='font-weight-bold'>Analysis</span>", reverse('analysis')))
else:
crumbs.append(("<span class='font-weight-bold'>Organzation</span> - <code>%s</code>" % org.name, org_m.group(1)))
# record_group
rg_m = re.match(r'(.+?/record_group/([0-9]+))', path)
if rg_m:
rg = models.RecordGroup.objects.get(pk=int(rg_m.group(2)))
if rg.for_analysis:
logger.debug("breadcrumbs: rg is for analysis, converting breadcrumbs")
else:
crumbs.append(("<span class='font-weight-bold'>RecordGroup</span> - <code>%s</code>" % rg.name, rg_m.group(1)))
# job
j_m = re.match(r'(.+?/job/([0-9]+))', path)
if j_m:
j = models.Job.objects.get(pk=int(j_m.group(2)))
if j.record_group.for_analysis:
crumbs.append(("<span class='font-weight-bold'>Analysis</span> - %s" % j.name, j_m.group(1)))
else:
crumbs.append(("<span class='font-weight-bold'>Job</span> - <code>%s</code>" % j.name, j_m.group(1)))
# record
r_m = re.match(r'(.+?/record/([0-9]+))', path)
if r_m:
r = models.Record.objects.get(pk=int(r_m.group(2)))
crumbs.append(("<span class='font-weight-bold'>Record</span> - <code>%s</code>" % r.record_id, r_m.group(1)))
# return
return crumbs
####################################################################
# Index #
####################################################################
@login_required
def index(request):
# get username
username = request.user.username
# get all organizations
orgs = models.Organization.objects.exclude(for_analysis=True).all()
# get record count
record_count = models.Record.objects.all().count()
# get published records count
pr = models.PublishedRecords()
published_record_count = pr.records.count()
# get job count
job_count = models.Job.objects.all().count()
return render(request, 'core/index.html', {
'username':username,
'orgs':orgs,
'record_count':"{:,}".format(record_count),
'published_record_count':"{:,}".format(published_record_count),
'job_count':"{:,}".format(job_count)
})
####################################################################
# User Livy Sessions #
####################################################################
@login_required
def livy_sessions(request):
# single Livy session
logger.debug("checking or active Livy session")
livy_session = models.LivySession.get_active_session()
# if session found, refresh
if livy_session:
livy_session.refresh_from_livy()
# return
return render(request, 'core/livy_sessions.html', {
'livy_session':livy_session,
'breadcrumbs':breadcrumb_parser(request.path)
})
@login_required
def livy_session_start(request):
logger.debug('Checking for pre-existing livy sessions')
# get "active" livy sessions
livy_sessions = models.LivySession.objects.filter(status__in=['starting','running','idle'])
logger.debug(livy_sessions)
# none found
if livy_sessions.count() == 0:
logger.debug('no Livy sessions found, creating')
livy_session = models.LivySession()
livy_session.start_session()
# if sessions present
elif livy_sessions.count() == 1:
logger.debug('single, active Livy session found, using')
elif livy_sessions.count() > 1:
logger.debug('multiple Livy sessions found, sending to sessions page to select one')
# redirect
return redirect('livy_sessions')
@login_required
def livy_session_stop(request, session_id):
logger.debug('stopping Livy session by Combine ID: %s' % session_id)
livy_session = models.LivySession.objects.filter(id=session_id).first()
# attempt to stop with Livy
models.LivyClient.stop_session(livy_session.session_id)
# remove from DB
livy_session.delete()
# redirect
return redirect('livy_sessions')
####################################################################
# Organizations #
####################################################################
def organizations(request):
'''
View all Organizations
'''
# show organizations
if request.method == 'GET':
logger.debug('retrieving organizations')
# get all organizations
orgs = models.Organization.objects.exclude(for_analysis=True).all()
# render page
return render(request, 'core/organizations.html', {
'orgs':orgs,
'breadcrumbs':breadcrumb_parser(request.path)
})
# create new organization
if request.method == 'POST':
# create new org
logger.debug(request.POST)
f = forms.OrganizationForm(request.POST)
f.save()
return redirect('organizations')
def organization(request, org_id):
'''
Details for Organization
'''
# get organization
org = models.Organization.objects.get(pk=org_id)
# get record groups for this organization
record_groups = models.RecordGroup.objects.filter(organization=org).exclude(for_analysis=True)
# render page
return render(request, 'core/organization.html', {
'org':org,
'record_groups':record_groups,
'breadcrumbs':breadcrumb_parser(request.path)
})
def organization_delete(request, org_id):
'''
Delete Organization
Note: Through cascade deletes, would remove:
- RecordGroup
- Job
- Record
'''
# get organization
org = models.Organization.objects.get(pk=org_id)
# delete org
org.delete()
return redirect('organizations')
####################################################################
# Record Groups #
####################################################################
def record_group_new(request, org_id):
'''
Create new Record Group
'''
# create new organization
if request.method == 'POST':
# create new record group
logger.debug(request.POST)
f = forms.RecordGroupForm(request.POST)
f.save()
# redirect to organization page
return redirect('organization', org_id=org_id)
def record_group_delete(request, org_id, record_group_id):
'''
Create new Record Group
'''
# retrieve record group
record_group = models.RecordGroup.objects.get(pk=record_group_id)
# delete
record_group.delete()
# redirect to organization page
return redirect('organization', org_id=org_id)
def record_group(request, org_id, record_group_id):
'''
View information about a single record group, including any and all jobs run
Args:
record_group_id (str/int): PK for RecordGroup table
'''
logger.debug('retrieving record group ID: %s' % record_group_id)
# retrieve record group
record_group = models.RecordGroup.objects.filter(id=record_group_id).first()
# get all jobs associated with record group
jobs = models.Job.objects.filter(record_group=record_group_id)
# get record group job lineage
job_lineage = record_group.get_jobs_lineage()
# get all currently applied publish set ids
publish_set_ids = models.PublishedRecords.get_publish_set_ids()
# loop through jobs
for job in jobs:
# update status
job.update_status()
# render page
return render(request, 'core/record_group.html', {
'record_group':record_group,
'jobs':jobs,
'job_lineage_json':json.dumps(job_lineage),
'publish_set_ids':publish_set_ids,
'breadcrumbs':breadcrumb_parser(request.path)
})
def record_group_update_publish_set_id(request, org_id, record_group_id):
if request.method == 'POST':
# get record group
record_group = models.RecordGroup.objects.get(pk=int(record_group_id))
logger.debug(request.POST)
# update RecordGroup publish set id
if request.POST.get('new_publish_set_id') != '':
record_group.publish_set_id = request.POST.get('new_publish_set_id')
record_group.save()
elif request.POST.get('existing_publish_set_id') != '':
record_group.publish_set_id = request.POST.get('existing_publish_set_id')
record_group.save()
else:
logger.debug('publish_set_id not set, skipping')
# redirect to
# return redirect('record_group', org_id=org_id, record_group_id=record_group.id)
return redirect(request.META.get('HTTP_REFERER'))
####################################################################
# Jobs #
####################################################################
@login_required
def all_jobs(request):
'''
View to show all jobs, across all Organizations, RecordGroups, and Job types
GET Args:
include_analysis: if true, include Analysis type jobs
'''
# capture include_analysis GET param if present
include_analysis = request.GET.get('include_analysis', False)
# get all jobs associated with record group
if include_analysis:
jobs = models.Job.objects.all()
else:
jobs = models.Job.objects.exclude(job_type='AnalysisJob').all()
# get job lineage for all jobs
if include_analysis:
ld = models.Job.get_all_jobs_lineage(directionality='downstream', exclude_analysis_jobs=False)
else:
ld = models.Job.get_all_jobs_lineage(directionality='downstream', exclude_analysis_jobs=True)
# loop through jobs and update status
for job in jobs:
job.update_status()
# render page
return render(request, 'core/all_jobs.html', {
'jobs':jobs,
'job_lineage_json':json.dumps(ld),
'breadcrumbs':breadcrumb_parser(request.path)
})
@login_required
def job_delete(request, org_id, record_group_id, job_id):
stime = time.time()
logger.debug('deleting job by id: %s' % job_id)
# get job
job = models.Job.objects.get(pk=job_id)
# set job status to deleting
job.name = "%s (DELETING)" % job.name
job.deleted = True
job.status = 'deleting'
job.save()
# remove via background tasks
bg_task = tasks.job_delete(job.id)
logger.debug('job scheduled for delete as background task: %s' % bg_task.task_hash)
logger.debug('job deleted in: %s' % (time.time()-stime))
# redirect
return redirect(request.META.get('HTTP_REFERER'))
@login_required
def job_details(request, org_id, record_group_id, job_id):
logger.debug('details for job id: %s' % job_id)
# get CombineJob
cjob = models.CombineJob.get_combine_job(job_id)
# detailed record count
record_count_details = cjob.get_detailed_job_record_count()
# field analysis
field_counts = cjob.count_indexed_fields()
# get job lineage
job_lineage = cjob.job.get_lineage()
# return
return render(request, 'core/job_details.html', {
'cjob':cjob,
'record_count_details':record_count_details,
'field_counts':field_counts,
'job_lineage_json':json.dumps(job_lineage),
'es_index':cjob.esi.es_index,
'breadcrumbs':breadcrumb_parser(request.path)
})
@login_required
def job_errors(request, org_id, record_group_id, job_id):
logger.debug('retrieving errors for job id: %s' % job_id)
# get CombineJob
cjob = models.CombineJob.get_combine_job(job_id)
job_errors = cjob.get_job_errors()
# return
return render(request, 'core/job_errors.html', {
'cjob':cjob,
'job_errors':job_errors,
'breadcrumbs':breadcrumb_parser(request.path)
})
@login_required
def job_update_note(request, org_id, record_group_id, job_id):
if request.method == 'POST':
# get CombineJob
cjob = models.CombineJob.get_combine_job(job_id)
# get job note
job_note = request.POST.get('job_note')
if job_note == '':
job_note = None
# update job note
cjob.job.note = job_note
cjob.job.save()
# redirect
return redirect(request.META.get('HTTP_REFERER'))
@login_required
def job_update_name(request, org_id, record_group_id, job_id):
if request.method == 'POST':
# get CombineJob
cjob = models.CombineJob.get_combine_job(job_id)
# get job note
job_name = request.POST.get('job_name')
if job_name == '':
job_name = None
# update job note
cjob.job.name = job_name
cjob.job.save()
# redirect
return redirect(request.META.get('HTTP_REFERER'))
@login_required
def job_dpla_field_map(request, org_id, record_group_id, job_id):
if request.method == 'POST':
# get CombineJob
cjob = models.CombineJob.get_combine_job(job_id)
# get DPLAJobMap
djm = cjob.job.dpla_mapping
# get fields
dpla_field = request.POST.get('dpla_field')
es_field = request.POST.get('es_field')
# if dpla none, get current dpla field for this es field, then set to None
if dpla_field == '':
if es_field in djm.inverted_mapped_fields().keys():
current_dpla_field = djm.inverted_mapped_fields()[es_field]
logger.debug('unsetting %s' % current_dpla_field)
dpla_field = current_dpla_field
es_field = None
# update DPLAJobMap and redirect
setattr(djm, dpla_field, es_field)
djm.save()
return redirect(request.META.get('HTTP_REFERER'))
@login_required
def job_harvest_oai(request, org_id, record_group_id):
'''
Create a new OAI Harvest Job
'''
# retrieve record group
record_group = models.RecordGroup.objects.filter(id=record_group_id).first()
# if GET, prepare form
if request.method == 'GET':
# retrieve all OAI endoints
oai_endpoints = models.OAIEndpoint.objects.all()
# get validation scenarios
validation_scenarios = models.ValidationScenario.objects.all()
# get index mappers
index_mappers = models.IndexMappers.get_mappers()
# render page
return render(request, 'core/job_harvest_oai.html', {
'record_group':record_group,
'oai_endpoints':oai_endpoints,
'validation_scenarios':validation_scenarios,
'index_mappers':index_mappers,
'breadcrumbs':breadcrumb_parser(request.path)
})
# if POST, submit job
if request.method == 'POST':
logger.debug('beginning oai harvest for Record Group: %s' % record_group.name)
# debug form
logger.debug(request.POST)
# get job name
job_name = request.POST.get('job_name')
if job_name == '':
job_name = None
# get job note
job_note = request.POST.get('job_note')
if job_note == '':
job_note = None
# retrieve OAIEndpoint
oai_endpoint = models.OAIEndpoint.objects.get(pk=int(request.POST['oai_endpoint_id']))
# add overrides if set
overrides = { override:request.POST[override]
for override in ['verb','metadataPrefix','scope_type','scope_value'] if request.POST[override] != '' }
logger.debug(overrides)
# get preferred metadata index mapper
index_mapper = request.POST.get('index_mapper')
# get requested validation scenarios
validation_scenarios = request.POST.getlist('validation_scenario', [])
# initiate job
cjob = models.HarvestOAIJob(
job_name=job_name,
job_note=job_note,
user=request.user,
record_group=record_group,
oai_endpoint=oai_endpoint,
overrides=overrides,
index_mapper=index_mapper,
validation_scenarios=validation_scenarios
)
# start job and update status
job_status = cjob.start_job()
# if job_status is absent, report job status as failed
if job_status == False:
cjob.job.status = 'failed'
cjob.job.save()
return redirect('record_group', org_id=org_id, record_group_id=record_group.id)
@login_required
def job_harvest_static_xml(request, org_id, record_group_id, hash_payload_filename=False):
'''
Create a new static XML Harvest Job
'''
# retrieve record group
record_group = models.RecordGroup.objects.filter(id=record_group_id).first()
# get validation scenarios
validation_scenarios = models.ValidationScenario.objects.all()
# get index mappers
index_mappers = models.IndexMappers.get_mappers()
# if GET, prepare form
if request.method == 'GET':
# render page
return render(request, 'core/job_harvest_static_xml.html', {
'record_group':record_group,
'validation_scenarios':validation_scenarios,
'index_mappers':index_mappers,
'breadcrumbs':breadcrumb_parser(request.path)
})
# if POST, submit job
if request.method == 'POST':
logger.debug('beginning static xml harvest for Record Group: %s' % record_group.name)
'''
When determining between user supplied file, and location on disk, favor location
'''
# establish payload dictionary
payload_dict = {}
# use location on disk
# When a location on disk is provided, set payload_dir as the location provided
if request.POST.get('static_filepath') != '':
payload_dict['type'] = 'location'
payload_dict['payload_dir'] = request.POST.get('static_filepath')
# use upload
# When a payload is uploaded, create payload_dir and set
else:
payload_dict['type'] = 'upload'
# get static file payload
payload_file = request.FILES['static_payload']
# grab content type
payload_dict['content_type'] = payload_file.content_type
# create payload dir
payload_dict['payload_dir'] = '/tmp/combine/%s' % str(uuid.uuid4())
os.makedirs(payload_dict['payload_dir'])
# establish payload filename
if hash_payload_filename:
payload_dict['payload_filename'] = hashlib.md5(payload_file.name.encode('utf-8')).hexdigest()
else:
payload_dict['payload_filename'] = payload_file.name
with open(os.path.join(payload_dict['payload_dir'], payload_dict['payload_filename']), 'wb') as f:
f.write(payload_file.read())
payload_file.close()
# include xpath queries
payload_dict['xpath_document_root'] = request.POST.get('xpath_document_root', None)
payload_dict['xpath_record_id'] = request.POST.get('xpath_record_id', None)
# get job name
job_name = request.POST.get('job_name')
if job_name == '':
job_name = None
# get job note
job_note = request.POST.get('job_note')
if job_note == '':
job_note = None
# get preferred metadata index mapper
index_mapper = request.POST.get('index_mapper')
# get requested validation scenarios
validation_scenarios = request.POST.getlist('validation_scenario', [])
# initiate job
cjob = models.HarvestStaticXMLJob(
job_name=job_name,
job_note=job_note,
user=request.user,
record_group=record_group,
index_mapper=index_mapper,
payload_dict=payload_dict,
validation_scenarios=validation_scenarios
)
# start job and update status
job_status = cjob.start_job()
# if job_status is absent, report job status as failed
if job_status == False:
cjob.job.status = 'failed'
cjob.job.save()
return redirect('record_group', org_id=org_id, record_group_id=record_group.id)
@login_required
def job_transform(request, org_id, record_group_id):
'''
Create a new Transform Job
'''
# retrieve record group
record_group = models.RecordGroup.objects.filter(id=record_group_id).first()
# if GET, prepare form
if request.method == 'GET':
# retrieve all jobs
input_jobs = record_group.job_set.all()
# get all transformation scenarios
transformations = models.Transformation.objects.all()
# get validation scenarios
validation_scenarios = models.ValidationScenario.objects.all()
# get index mappers
index_mappers = models.IndexMappers.get_mappers()
# get job lineage for all jobs (filtered to input jobs scope)
ld = models.Job.get_all_jobs_lineage(directionality='downstream', jobs_query_set=input_jobs)
# render page
return render(request, 'core/job_transform.html', {
'job_select_type':'single',
'record_group':record_group,
'input_jobs':input_jobs,
'transformations':transformations,
'validation_scenarios':validation_scenarios,
'index_mappers':index_mappers,
'job_lineage_json':json.dumps(ld),
'breadcrumbs':breadcrumb_parser(request.path)
})
# if POST, submit job
if request.method == 'POST':
logger.debug('beginning transform for Record Group: %s' % record_group.name)
# debug form
logger.debug(request.POST)
# get job name
job_name = request.POST.get('job_name')
if job_name == '':
job_name = None
# get job note
job_note = request.POST.get('job_note')
if job_note == '':
job_note = None
# retrieve input job
input_job = models.Job.objects.get(pk=int(request.POST['input_job_id']))
logger.debug('using job as input: %s' % input_job)
# retrieve transformation
transformation = models.Transformation.objects.get(pk=int(request.POST['transformation_id']))
logger.debug('using transformation: %s' % transformation)
# get preferred metadata index mapper
index_mapper = request.POST.get('index_mapper')
# get requested validation scenarios
validation_scenarios = request.POST.getlist('validation_scenario', [])
# initiate job
cjob = models.TransformJob(
job_name=job_name,
job_note=job_note,
user=request.user,
record_group=record_group,
input_job=input_job,
transformation=transformation,
index_mapper=index_mapper,
validation_scenarios=validation_scenarios
)
# start job and update status
job_status = cjob.start_job()
# if job_status is absent, report job status as failed
if job_status == False:
cjob.job.status = 'failed'
cjob.job.save()
return redirect('record_group', org_id=org_id, record_group_id=record_group.id)
@login_required
def job_merge(request, org_id, record_group_id):
'''
Merge multiple jobs into a single job
'''
# retrieve record group
record_group = models.RecordGroup.objects.get(pk=record_group_id)
# if GET, prepare form
if request.method == 'GET':
# retrieve all jobs
input_jobs = models.Job.objects.exclude(job_type='AnalysisJob').all()
# get validation scenarios
validation_scenarios = models.ValidationScenario.objects.all()
# get index mappers
index_mappers = models.IndexMappers.get_mappers()
# get job lineage for all jobs (filtered to input jobs scope)
ld = models.Job.get_all_jobs_lineage(directionality='downstream', jobs_query_set=input_jobs)
# render page
return render(request, 'core/job_merge.html', {
'job_select_type':'multiple',
'record_group':record_group,
'input_jobs':input_jobs,
'validation_scenarios':validation_scenarios,
'index_mappers':index_mappers,
'job_lineage_json':json.dumps(ld),
'breadcrumbs':breadcrumb_parser(request.path)
})
# if POST, submit job
if request.method == 'POST':
logger.debug('Merging jobs for Record Group: %s' % record_group.name)
# debug form
logger.debug(request.POST)
# get job name
job_name = request.POST.get('job_name')
if job_name == '':
job_name = None
# get job note
job_note = request.POST.get('job_note')
if job_note == '':
job_note = None
# retrieve jobs to merge
input_jobs = [ models.Job.objects.get(pk=int(job)) for job in request.POST.getlist('input_job_id') ]
logger.debug('merging jobs: %s' % input_jobs)
# get preferred metadata index mapper
index_mapper = request.POST.get('index_mapper')
# get requested validation scenarios
validation_scenarios = request.POST.getlist('validation_scenario', [])
# initiate job
cjob = models.MergeJob(
job_name=job_name,
job_note=job_note,
user=request.user,
record_group=record_group,
input_jobs=input_jobs,
index_mapper=index_mapper,
validation_scenarios=validation_scenarios
)
# start job and update status
job_status = cjob.start_job()
# if job_status is absent, report job status as failed
if job_status == False:
cjob.job.status = 'failed'
cjob.job.save()
return redirect('record_group', org_id=org_id, record_group_id=record_group.id)
@login_required
def job_publish(request, org_id, record_group_id):
'''
Publish a single job for a Record Group
'''
# retrieve record group
record_group = models.RecordGroup.objects.get(pk=record_group_id)
# if GET, prepare form
if request.method == 'GET':
# retrieve all jobs for this record group
input_jobs = models.Job.objects.filter(record_group=record_group).all()
# input_jobs = models.Job.objects.filter(record_group=record_group).exclude(job_type='PublishJob').all()
# get validation scenarios
validation_scenarios = models.ValidationScenario.objects.all()
# get job lineage for all jobs (filtered to input jobs scope)
ld = models.Job.get_all_jobs_lineage(directionality='downstream', jobs_query_set=input_jobs)
# get all currently applied publish set ids
publish_set_ids = models.PublishedRecords.get_publish_set_ids()
# render page
return render(request, 'core/job_publish.html', {
'job_select_type':'single',