From 7e4c8763ed36f00621ae272977c021bc0f1a9e7c Mon Sep 17 00:00:00 2001 From: shane knapp Date: Mon, 15 Dec 2014 10:24:26 -0800 Subject: [PATCH] quieting wget output --- scripts/jenkins-test | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/scripts/jenkins-test b/scripts/jenkins-test index c3240a8b52..d1a3619263 100755 --- a/scripts/jenkins-test +++ b/scripts/jenkins-test @@ -27,11 +27,11 @@ export SPARK_DRIVER_MEMORY=8g pushd "$ADAM_TMP_DIR" if [[ $HADOOP_VERSION == "1.0.4" ]]; then - wget http://d3kbcqa49mib13.cloudfront.net/spark-1.1.0-bin-hadoop1.tgz + wget -q http://d3kbcqa49mib13.cloudfront.net/spark-1.1.0-bin-hadoop1.tgz tar xzvf spark-1.1.0-bin-hadoop1.tgz export SPARK_HOME="${ADAM_TMP_DIR}/spark-1.1.0-bin-hadoop1" else - wget http://d3kbcqa49mib13.cloudfront.net/spark-1.1.0-bin-hadoop2.3.tgz + wget -q http://d3kbcqa49mib13.cloudfront.net/spark-1.1.0-bin-hadoop2.3.tgz tar xzvf spark-1.1.0-bin-hadoop2.3.tgz export SPARK_HOME="${ADAM_TMP_DIR}/spark-1.1.0-bin-hadoop2.3" fi @@ -43,7 +43,7 @@ BAM=mouse_chrM.bam READS="$BAM".reads PILEUPS="$BAM".pileup rm -rf "$BAM" -wget https://s3.amazonaws.com/bdgenomics-test/"$BAM" +wget -q https://s3.amazonaws.com/bdgenomics-test/"$BAM" echo "Converting BAM to ADAM read format" rm -rf "$READS" "$ADAM" bam2adam -samtools_validation lenient "$BAM" "$READS"