From 6f1de2b50781960595a9754973c68d6c23482153 Mon Sep 17 00:00:00 2001
From: Michael Heuer <heuermh@acm.org>
Date: Sun, 23 Jul 2017 14:44:15 +0200
Subject: [PATCH] Use explicit types for header lines.

---
 .../bdgenomics/adam/converters/DefaultHeaderLines.scala    | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/adam-core/src/main/scala/org/bdgenomics/adam/converters/DefaultHeaderLines.scala b/adam-core/src/main/scala/org/bdgenomics/adam/converters/DefaultHeaderLines.scala
index 8aed777d11..93fd5d44de 100644
--- a/adam-core/src/main/scala/org/bdgenomics/adam/converters/DefaultHeaderLines.scala
+++ b/adam-core/src/main/scala/org/bdgenomics/adam/converters/DefaultHeaderLines.scala
@@ -20,6 +20,7 @@ package org.bdgenomics.adam.converters
 import htsjdk.variant.vcf.{
   VCFConstants,
   VCFFormatHeaderLine,
+  VCFHeaderLine,
   VCFHeaderLineCount,
   VCFHeaderLineType,
   VCFInfoHeaderLine,
@@ -91,7 +92,7 @@ object DefaultHeaderLines {
   /**
    * Default set of VCF header lines for INFO fields supported in ADAM.
    */
-  lazy val infoHeaderLines = Seq(
+  lazy val infoHeaderLines: Seq[VCFInfoHeaderLine] = Seq(
     ancestralAllele,
     alleleCount,
     readDepth,
@@ -169,7 +170,7 @@ object DefaultHeaderLines {
   /**
    * Default set of VCF header lines for GT format fields supported in ADAM.
    */
-  lazy val formatHeaderLines = Seq(
+  lazy val formatHeaderLines: Seq[VCFFormatHeaderLine] = Seq(
     genotype,
     genotypeQuality,
     allelicDepth,
@@ -188,5 +189,5 @@ object DefaultHeaderLines {
   /**
    * Default set of VCF header lines for INFO and GT format fields supported in ADAM.
    */
-  lazy val allHeaderLines = infoHeaderLines ++ formatHeaderLines
+  lazy val allHeaderLines: Seq[VCFHeaderLine] = infoHeaderLines ++ formatHeaderLines
 }