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iEEG examples to add #131

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choldgraf opened this issue Oct 22, 2018 · 3 comments · Fixed by #151
Closed

iEEG examples to add #131

choldgraf opened this issue Oct 22, 2018 · 3 comments · Fixed by #151
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@choldgraf
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choldgraf commented Oct 22, 2018

The following is a list of example datasets that would be particularly useful to highlight the iEEG specification for BIDS:

  • multiple runs of clinical observation data

  • Clinical recordings during no task

  • Seizure recordings
    We could maybe add the dataset we use for the Brainstorm SEEG tutorial?
    https://neuroimage.usc.edu/brainstorm/Tutorials/Epileptogenicity

  • An example showing how to properly format hardware/software filters:

    I am linking to an EEG example on how the filter fields could be formatted:

    https://github.com/bids-standard/bids-starter-kit/wiki/FAQ#how-to-format-hardware-and-software-filter-fields-in-a-json

    in brief, it means defining a dictionary for each filter field. This dictionary then
    contains a filter-name, which again links to a dictionary ... this dictionary then
    contains the key value pairs of the filter parameters.

    I agree that it sounds a bit complicated and nested at first glance, but it allows for a
    very exhaustive documentation of the filters. For example two different kinds of
    hardware filters with different sets of parameters

    feedback is welcome, since this is not very fixed in EEG.

@ftadel
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ftadel commented Mar 6, 2019

The Brainstorm SEEG tutorial dataset is available here:
#133
https://openneuro.org/datasets/ds001779

@sappelhoff
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I think the ieeg examples have quite a good coverage by now. Should we merge the branch into master, like we will do with the EEG branch? @choldgraf @dorahermes

@dorahermes
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I think so, @choldgraf ?
(My examples and ieeg_multimodal include properly formatted hardware filters)

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4 participants