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Hermes plasma edge simulation model. Uses BOUT++ framework, adds finite volume operators and neutral gas models.
This is Hermes-2, a hot ion drift-reduced model.
Author: Ben Dudson, University of York benjamin.dudson@york.ac.uk
Released under the GPL license
Full text of the license is in the file LICENSE. If you are using Hermes-2, please cite the relevant papers.
Copyright B.Dudson, J.Leddy, University of York, September 2017-2019
email: benjamin.dudson@york.ac.uk
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
This version works with the BOUT++ v4.4, currently the master branch. Either CMake or Autotools can be used to build it.
This is probably the most straightforward method to use now. First configure BOUT++ and Hermes-2. To use the default options and minimal dependencies just run:
$ cmake . -B build
Alternatively the CMake build can be customised: See the BOUT++
documentation
for examples of using cmake arguments, or edit the compile options
interactively before building:
$ ccmake . -B build
During configuration BOUT++ will be automatically downloaded as a submodule, together with some dependencies (NetCDF and FFTW are assumed to be installed already, along with optional dependencies like SUNDIALS and PETSc if they are requested). Once configured, run build to compile BOUT++ and then Hermes-3:
$ cmake --build build
To build and run tests with GNU autoconf and make, first install BOUT++:
git clone https://github.com/boutproject/BOUT-dev.git
cd BOUT-dev
To run this model, preconditioning is strongly recommended, and requires the CVODE solver, part of SUNDIALS. Tested with version 2.6.0. To enable CVODE, BOUT++ should be configured using
./configure --with-cvode
or
./configure --with-sundials
(which then also enables the IDA solver). Compile BOUT++ with
make
Then clone the Hermes-2 repository
git clone https://github.com/bendudson/hermes-2
cd hermes-2
To compile, run "make" and specify the location of BOUT++
make BOUT_TOP=/path/to/BOUT-next
This path should be the full path, not relative path, to avoid problems with compilation in subdirectories.