packages.bib

@Manual{R-base,
  title = {R: A Language and Environment for Statistical Computing},
  author = {{R Core Team}},
  organization = {R Foundation for Statistical Computing},
  address = {Vienna, Austria},
  year = {2022},
  url = {https://www.R-project.org/},
}

@Manual{R-bookdown,
  title = {bookdown: Authoring Books and Technical Documents with R Markdown},
  author = {Yihui Xie},
  year = {2022},
  note = {R package version 0.29},
  url = {https://CRAN.R-project.org/package=bookdown},
}

@Manual{R-broom,
  title = {broom: Convert Statistical Objects into Tidy Tibbles},
  author = {David Robinson and Alex Hayes and Simon Couch},
  year = {2022},
  note = {R package version 1.0.1},
  url = {https://CRAN.R-project.org/package=broom},
}

@Manual{R-GGally,
  title = {GGally: Extension to ggplot2},
  author = {Barret Schloerke and Di Cook and Joseph Larmarange and Francois Briatte and Moritz Marbach and Edwin Thoen and Amos Elberg and Jason Crowley},
  year = {2021},
  note = {R package version 2.1.2},
  url = {https://CRAN.R-project.org/package=GGally},
}

@Manual{R-ggplot2,
  title = {ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics},
  author = {Hadley Wickham and Winston Chang and Lionel Henry and Thomas Lin Pedersen and Kohske Takahashi and Claus Wilke and Kara Woo and Hiroaki Yutani and Dewey Dunnington},
  year = {2022},
  note = {R package version 3.3.6},
  url = {https://CRAN.R-project.org/package=ggplot2},
}

@Manual{R-ggpmisc,
  title = {ggpmisc: Miscellaneous Extensions to ggplot2},
  author = {Pedro J. Aphalo},
  year = {2022},
  note = {R package version 0.5.0},
  url = {https://CRAN.R-project.org/package=ggpmisc},
}

@Manual{R-JuliaCall,
  title = {JuliaCall: Seamless Integration Between R and Julia},
  author = {Changcheng Li},
  year = {2022},
  note = {R package version 0.17.5},
  url = {https://github.com/Non-Contradiction/JuliaCall},
}

@Manual{R-kableExtra,
  title = {kableExtra: Construct Complex Table with kable and Pipe Syntax},
  author = {Hao Zhu},
  year = {2021},
  note = {R package version 1.3.4},
  url = {https://CRAN.R-project.org/package=kableExtra},
}

@Manual{R-knitr,
  title = {knitr: A General-Purpose Package for Dynamic Report Generation in R},
  author = {Yihui Xie},
  year = {2022},
  note = {R package version 1.40},
  url = {https://yihui.org/knitr/},
}

@Manual{R-metathis,
  title = {metathis: HTML Metadata Tags for R Markdown and Shiny},
  author = {Garrick Aden-Buie},
  year = {2022},
  note = {R package version 1.1.2},
  url = {https://CRAN.R-project.org/package=metathis},
}

@Manual{R-readxl,
  title = {readxl: Read Excel Files},
  author = {Hadley Wickham and Jennifer Bryan},
  year = {2022},
  note = {R package version 1.4.1},
  url = {https://CRAN.R-project.org/package=readxl},
}

@Manual{R-reticulate,
  title = {reticulate: Interface to Python},
  author = {Kevin Ushey and JJ Allaire and Yuan Tang},
  year = {2022},
  note = {R package version 1.26},
  url = {https://CRAN.R-project.org/package=reticulate},
}

@Manual{R-rmarkdown,
  title = {rmarkdown: Dynamic Documents for R},
  author = {JJ Allaire and Yihui Xie and Jonathan McPherson and Javier Luraschi and Kevin Ushey and Aron Atkins and Hadley Wickham and Joe Cheng and Winston Chang and Richard Iannone},
  year = {2022},
  note = {R package version 2.16},
  url = {https://CRAN.R-project.org/package=rmarkdown},
}

@Book{bookdown2016,
  title = {bookdown: Authoring Books and Technical Documents with {R} Markdown},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2016},
  note = {ISBN 978-1138700109},
  url = {https://bookdown.org/yihui/bookdown},
}

@Book{ggplot22016,
  author = {Hadley Wickham},
  title = {ggplot2: Elegant Graphics for Data Analysis},
  publisher = {Springer-Verlag New York},
  year = {2016},
  isbn = {978-3-319-24277-4},
  url = {https://ggplot2.tidyverse.org},
}

@Article{JuliaCall,
  author = {Changcheng Li},
  title = {{JuliaCall}: an {R} package for seamless integration between {R} and {Julia}},
  journal = {The Journal of Open Source Software},
  publisher = {The Open Journal},
  year = {2019},
  volume = {4},
  number = {35},
  pages = {1284},
  doi = {10.21105/joss.01284},
}

@Book{knitr2015,
  title = {Dynamic Documents with {R} and knitr},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2015},
  edition = {2nd},
  note = {ISBN 978-1498716963},
  url = {https://yihui.org/knitr/},
}

@InCollection{knitr2014,
  booktitle = {Implementing Reproducible Computational Research},
  editor = {Victoria Stodden and Friedrich Leisch and Roger D. Peng},
  title = {knitr: A Comprehensive Tool for Reproducible Research in {R}},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  year = {2014},
  note = {ISBN 978-1466561595},
  url = {http://www.crcpress.com/product/isbn/9781466561595},
}

@Book{rmarkdown2018,
  title = {R Markdown: The Definitive Guide},
  author = {Yihui Xie and J.J. Allaire and Garrett Grolemund},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2018},
  note = {ISBN 9781138359338},
  url = {https://bookdown.org/yihui/rmarkdown},
}

@Book{rmarkdown2020,
  title = {R Markdown Cookbook},
  author = {Yihui Xie and Christophe Dervieux and Emily Riederer},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2020},
  note = {ISBN 9780367563837},
  url = {https://bookdown.org/yihui/rmarkdown-cookbook},
}