From 633ad9ceb06c44c4c7d458397f38dc5ff05bd33d Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=D0=91=D0=B0=D0=B1=D0=B8=D0=BD=20=D0=AE=D1=80=D0=B8=D0=B9?=
 =?UTF-8?q?=20=D0=AE=D1=80=D1=8C=D0=B5=D0=B2=D0=B8=D1=87?= <babin@pcr.int>
Date: Mon, 15 Jul 2019 17:11:55 +0300
Subject: [PATCH] index error in count indels

---
 crispr_cas9/count_indels.py |  2 ++
 setup.py                    | 10 +++++-----
 2 files changed, 7 insertions(+), 5 deletions(-)

diff --git a/crispr_cas9/count_indels.py b/crispr_cas9/count_indels.py
index a535c72..551dbb8 100644
--- a/crispr_cas9/count_indels.py
+++ b/crispr_cas9/count_indels.py
@@ -373,6 +373,8 @@ def main():
                       application which doesn't allow it to be processed
                       Now this file is skipped
                        """.format(f))
+            except IndexError as inderr:
+                print("something wrong with {0}, error: {1}".format(f, inderr))
             try:
                 df_dels = _create_df(ref_seq, total_dels)
                 df_ins = _create_df(ref_seq, total_ins)
diff --git a/setup.py b/setup.py
index 83e77ee..2797d5b 100644
--- a/setup.py
+++ b/setup.py
@@ -16,11 +16,11 @@
   download_url = 'https://github.com/babinyurii/crispr_cas9/archive/v_0.3.tar.gz',
   keywords = ['bioinformatics', 'indels', 'sequencing', 'NGS'],   
   install_requires=[            
-          'pandas==0.23.0',
-          'biopython==1.73',
-          'matplotlib==2.2.2',
-          'numpy==1.11.3',
-          'seaborn==0.8.1'
+          'pandas',
+          'biopython',
+          'matplotlib',
+          'numpy',
+          'seaborn'
       ],
   classifiers=[
     'Development Status :: 4 - Beta',