_toc.yml

# Table of contents
# Learn more at https://jupyterbook.org/customize/toc.html

format: jb-book
root: intro
parts:
  - caption: Unit 1
    numbered: 1
    chapters:
    - file: unit1/Unit1-about-this-course
    - file: unit1/Unit1-topics
    - file: unit1/Unit1-software
    - file: unit1/Unit1-simple-regression
  - caption: Unit 2
    numbered: 1
    chapters:
    - file: unit2/Unit2-history
    - file: unit2/Unit2-history2
    - file: unit2/Unit2-bayesianvsclassical
    - file: unit2/Unit2-10flips
    - file: unit2/Unit2-fda
  - caption: Unit 3
    chapters:
    - file: unit3/Unit3-NecessaryProbability
    - file: unit3/Unit3-conditioning1
    - file: unit3/Unit3-conditioning2
    - file: unit3/Unit3-Bayes-theorem
    - file: unit3/Unit3-ManufacturingBayes
    - file: unit3/Unit3-TwoHeadedCoin
    - file: unit3/Unit3-bayesnetworks
    - file: unit3/Unit3-Alarm
    - file: unit3/moreexamples3
      sections:
      - file: unit3/Unit3-Emily
      - file: unit3/SupplementaryExercises35
  - caption: Unit 4
    chapters:
    - file: unit4/distributions
      sections:
      - file: unit4/Unit4-basicdist
      - file: unit4/Unit4-numericalchar
      - file: unit4/Unit4-jointconditionals
    - file: unit4/bayestheorem
      sections:
      - file: unit4/Unit4-ingredients
      - file: unit4/Unit4-conjugatefamilies
      - file: unit4/Unit4-IQexample
      - file: unit4/Unit4-BetaPriors
      - file: unit4/Unit4-poissongamma
    - file: unit4/conjugatecases
      sections:
      - file: unit4/Unit4-estimation
      - file: unit4/Unit4-crediblesets
      - file: unit4/Unit4-GammaGamma
      - file: unit4/Unit4-testing
      - file: unit4/Unit4-prediction
    - file: unit4/priors
      sections:
      - file: unit4/Unit4-elicitation
      - file: unit4/Unit4-noninform
      - file: unit4/Unit4-samplesize
      - file: unit4/Unit4-eBay
    - file: unit4/empiricalbayes
      sections:
      - file: unit4/Unit4-parametric
      - file: unit4/Unit4-nonpara
    - file: unit4/moreexamples
      sections:
      - file: unit4/Unit4-AlphaParticles
      - file: unit4/SupplementaryExercises43
      - file: unit4/SupplementaryExercises48
  - caption: Unit 5
    chapters:
    - file: unit5/bayesian-computation
      sections:
      - file: unit5/Unit5-numericalapproaches
      - file: unit5/Unit5-norcau1
      - file: unit5/Unit5-Laplace
      - file: unit5/Unit5-demo-Laplaces-method
      - file: unit5/Unit5-mcmc
    - file: unit5/metropolis-hastings
      sections:
      - file: unit5/Unit5-Metropolis
      - file: unit5/Unit5-Metropolis1
      - file: unit5/Unit5-MetropolisHastings
      - file: unit5/Unit5-MetropolisHastings2
    - file: unit5/gibbs-sampling
      sections:
      - file: unit5/Unit5-gibbsintro
      - file: unit5/Unit5-GibbsSampler
      - file: unit5/Unit5-gibbs2
      - file: unit5/Unit5-PumpsMCMC
      - file: unit5/Unit5-gibbsex3math
      - file: unit5/Unit5-Gibbs3
    - file: unit5/other
      sections:
      - file: unit5/Unit5-hamiltonian
      - file: unit5/Unit5-other-methods
    - file: unit5/SupplementaryExercises54
  - caption: Unit 6
    numbered: 1
    chapters:
    - file: unit6/Unit6-probabilisticprogramming
    - file: unit6/Unit6-doodlebug
    - file: unit6/Unit6-demo-doodle
    - file: unit6/Unit6-moreaboutpymc
    - file: unit6/Unit6-loadingdata
    - file: unit6/Unit6-missingdata
    - file: unit6/Unit6-htesting
    - file: unit6/Unit6-prediction
    - file: unit6/Unit6-censoring
    - file: unit6/Unit6-customlikelihood
  - caption: Unit 7
    chapters:
    - file: unit7/hierarchical
      sections:
      - file: unit7/Unit7-introduction
      - file: unit7/Unit7-why
      - file: unit7/Unit7-priors
      - file: unit7/Unit7-hiddenmixtures
      - file: unit7/Unit7-metaanalysis
    - file: unit7/linearmodels
      sections:
      - file: unit7/Unit7-anova
      - file: unit7/Unit7-coagulation
      - file: unit7/Unit7-factorial
      - file: unit7/Unit7-demo-factorial
      - file: unit7/Unit7-regression
      - file: unit7/Unit7-demo-regression
      - file: unit7/Unit7-multipleregression
      - file: unit7/Unit7-demo-multiple
    - file: unit7/othermodels
      sections:
      - file: unit7/Unit7-other
      - file: unit7/Unit7-arrhythmia
      - file: unit7/Unit7-multinomial
      - file: unit7/Unit7-demo-multinomial
      - file: unit7/Unit7-multilevel
      - file: unit7/Unit7-demo-multilevel
    - file: unit7/SupplementaryExercises74
  - caption: Unit 8
    chapters:
    - file: unit8/Unit8-missing
    - file: unit8/Unit8-missrats
    - file: unit8/Unit8-timetoevent
    - file: unit8/Unit8-tteex1
    - file: unit8/Unit8-tteex2
    - file: unit8/Unit8-tte-gastric
    - file: unit8/SupplementaryExercises83
  - caption: Unit 9
    chapters:
    - file: unit9/Unit9-fit-selection-diagnostics
    - file: unit9/Unit9-dic
    - file: unit9/Unit9-fitsel
    - file: unit9/Unit9-hald
    - file: unit9/Unit9-cpo
    - file: unit9/Unit9-gessell
    - file: unit9/Unit9-cumulative
    - file: unit9/Unit9-cumulative2
    - file: unit9/Unit9-ssvs
    - file: unit9/Unit9-hald2
    - file: unit9/SupplementaryExercises93
  - caption: Unit 10
    numbered: 1
    chapters:
    - file: unit10/Unit10-lister
    - file: unit10/Unit10-growth
    - file: unit10/Unit10-disasters
    - file: unit10/Unit10-rasch
    - file: unit10/Unit10-italywines123
    - file: unit10/Unit10-katla
    - file: unit10/Unit10-sunspots
  - caption: Back Matter
    numbered: 1
    chapters:
    - glob: backmatter/*