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checkm.yml
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name: checkm
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- alsa-lib=1.2.10=hd590300_0
- attr=2.5.1=h166bdaf_1
- brotli=1.1.0=hd590300_1
- brotli-bin=1.1.0=hd590300_1
- bzip2=1.0.8=hd590300_5
- c-ares=1.25.0=hd590300_0
- ca-certificates=2023.11.17=hbcca054_0
- cairo=1.18.0=h3faef2a_0
- certifi=2023.11.17=pyhd8ed1ab_0
- contourpy=1.2.0=py39h7633fee_0
- cycler=0.12.1=pyhd8ed1ab_0
- dbus=1.13.6=h5008d03_3
- expat=2.5.0=hcb278e6_1
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=h77eed37_1
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.47.2=py39hd1e30aa_0
- freetype=2.12.1=h267a509_2
- gettext=0.21.1=h27087fc_0
- glib=2.78.3=hfc55251_0
- glib-tools=2.78.3=hfc55251_0
- graphite2=1.3.13=h58526e2_1001
- gst-plugins-base=1.22.8=h8e1006c_1
- gstreamer=1.22.8=h98fc4e7_1
- harfbuzz=8.3.0=h3d44ed6_0
- hmmer=3.4=hdbdd923_0
- icu=73.2=h59595ed_0
- importlib-resources=6.1.1=pyhd8ed1ab_0
- importlib_resources=6.1.1=pyhd8ed1ab_0
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.5=py39h7633fee_1
- krb5=1.21.2=h659d440_0
- lame=3.100=h166bdaf_1003
- lcms2=2.15=h7f713cb_2
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=20_linux64_openblas
- libbrotlicommon=1.1.0=hd590300_1
- libbrotlidec=1.1.0=hd590300_1
- libbrotlienc=1.1.0=hd590300_1
- libcap=2.69=h0f662aa_0
- libcblas=3.9.0=20_linux64_openblas
- libclang=15.0.7=default_hb11cfb5_4
- libclang13=15.0.7=default_ha2b6cf4_4
- libcups=2.3.3=h4637d8d_4
- libcurl=8.5.0=hca28451_0
- libdeflate=1.18=h0b41bf4_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=hd590300_2
- libevent=2.1.12=hf998b51_1
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libflac=1.4.3=h59595ed_0
- libgcc-ng=13.2.0=h807b86a_3
- libgcrypt=1.10.3=hd590300_0
- libgfortran-ng=13.2.0=h69a702a_3
- libgfortran5=13.2.0=ha4646dd_3
- libglib=2.78.3=h783c2da_0
- libgomp=13.2.0=h807b86a_3
- libgpg-error=1.47=h71f35ed_0
- libiconv=1.17=hd590300_2
- libjpeg-turbo=2.1.5.1=hd590300_1
- liblapack=3.9.0=20_linux64_openblas
- libllvm15=15.0.7=hb3ce162_4
- libnghttp2=1.58.0=h47da74e_1
- libnsl=2.0.1=hd590300_0
- libogg=1.3.4=h7f98852_1
- libopenblas=0.3.25=pthreads_h413a1c8_0
- libopus=1.3.1=h7f98852_1
- libpng=1.6.39=h753d276_0
- libpq=15.4=hedfdc17_5
- libsndfile=1.2.2=hc60ed4a_1
- libsqlite=3.44.2=h2797004_0
- libssh2=1.11.0=h0841786_0
- libstdcxx-ng=13.2.0=h7e041cc_3
- libsystemd0=255=h3516f8a_0
- libtiff=4.6.0=h8b53f26_0
- libuuid=2.38.1=h0b41bf4_0
- libvorbis=1.3.7=h9c3ff4c_0
- libwebp-base=1.3.2=hd590300_0
- libxcb=1.15=h0b41bf4_0
- libxcrypt=4.4.36=hd590300_1
- libxkbcommon=1.6.0=hd429924_1
- libxml2=2.12.4=h232c23b_1
- libzlib=1.2.13=hd590300_5
- lz4-c=1.9.4=hcb278e6_0
- matplotlib=3.8.2=py39hf3d152e_0
- matplotlib-base=3.8.2=py39he9076e7_0
- mpg123=1.32.4=h59595ed_0
- munkres=1.0.7=py_1
- mysql-common=8.0.33=hf1915f5_6
- mysql-libs=8.0.33=hca2cd23_6
- ncurses=6.4=h59595ed_2
- nspr=4.35=h27087fc_0
- nss=3.96=h1d7d5a4_0
- numpy=1.26.3=py39h474f0d3_0
- openjpeg=2.5.0=h488ebb8_3
- openssl=3.2.0=hd590300_1
- packaging=23.2=pyhd8ed1ab_0
- pcre2=10.42=hcad00b1_0
- pillow=10.0.1=py39h444a776_1
- pip=23.3.2=pyhd8ed1ab_0
- pixman=0.43.0=h59595ed_0
- ply=3.11=py_1
- pplacer=1.1.alpha19=h9ee0642_2
- prodigal=2.6.3=h031d066_7
- pthread-stubs=0.4=h36c2ea0_1001
- pulseaudio-client=16.1=hb77b528_5
- pyparsing=3.1.1=pyhd8ed1ab_0
- pyqt=5.15.9=py39h52134e7_5
- pyqt5-sip=12.12.2=py39h3d6467e_5
- pysam=0.22.0=py39hcada746_0
- python=3.9.18=h0755675_1_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.9=4_cp39
- qt-main=5.15.8=hc47bfe8_16
- readline=8.2=h8228510_1
- setuptools=69.0.3=pyhd8ed1ab_0
- sip=6.7.12=py39h3d6467e_0
- six=1.16.0=pyh6c4a22f_0
- tk=8.6.13=noxft_h4845f30_101
- toml=0.10.2=pyhd8ed1ab_0
- tomli=2.0.1=pyhd8ed1ab_0
- tornado=6.3.3=py39hd1e30aa_1
- tzdata=2023d=h0c530f3_0
- unicodedata2=15.1.0=py39hd1e30aa_0
- wheel=0.42.0=pyhd8ed1ab_0
- xcb-util=0.4.0=hd590300_1
- xcb-util-image=0.4.0=h8ee46fc_1
- xcb-util-keysyms=0.4.0=h8ee46fc_1
- xcb-util-renderutil=0.3.9=hd590300_1
- xcb-util-wm=0.4.1=h8ee46fc_1
- xkeyboard-config=2.40=hd590300_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.1.1=hd590300_0
- xorg-libsm=1.2.4=h7391055_0
- xorg-libx11=1.8.7=h8ee46fc_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxrender=0.9.11=hd590300_0
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xf86vidmodeproto=2.3.1=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- zipp=3.17.0=pyhd8ed1ab_0
- zlib=1.2.13=hd590300_5
- zstd=1.5.5=hfc55251_0
- pip:
- checkm-genome==1.2.2
- dendropy==4.6.1
- scipy==1.11.4