From f8515e2205f563655612df46537315aec07ec37a Mon Sep 17 00:00:00 2001
From: angelovangel <aangeloo@gmail.com>
Date: Sat, 4 Dec 2021 12:39:56 +0100
Subject: [PATCH] bump to v0.1.2

---
 Cargo.lock  | 2 +-
 Cargo.toml  | 2 +-
 README.md   | 2 +-
 src/main.rs | 5 +++--
 4 files changed, 6 insertions(+), 5 deletions(-)

diff --git a/Cargo.lock b/Cargo.lock
index 71b3baa..505b7f0 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -291,7 +291,7 @@ dependencies = [
 
 [[package]]
 name = "fastkmers"
-version = "0.1.1"
+version = "0.1.2"
 dependencies = [
  "assert_cmd",
  "bio",
diff --git a/Cargo.toml b/Cargo.toml
index f933a10..f15ed43 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "fastkmers"
-version = "0.1.1"
+version = "0.1.2"
 authors = ["Angel Angelov <aangeloo@gmail.com>"]
 repository = "https://github.com/angelovangel/fastkmers"
 
diff --git a/README.md b/README.md
index 44b1176..0f038e6 100644
--- a/README.md
+++ b/README.md
@@ -41,7 +41,7 @@ fastkmers -k 4 -a -j file.fasta
 fastkmers -k 5 -q "AATTG" file.fastq.gz
 
 # query with regex is also supported
-# this example would match k-mers whose last 4 bases are: not T| A | T or G | A
+# this example would match all 5-mers whose last 4 bases are: not T| A | T or G | A
 fastkmers -k 5 -q "[^T]A[T|G]A$" file.fastq.gz
 
 ```
diff --git a/src/main.rs b/src/main.rs
index 2711223..01bb782 100644
--- a/src/main.rs
+++ b/src/main.rs
@@ -21,6 +21,7 @@ fn get_fastq_reader(path: &String) -> Box<dyn (::std::io::Read)> {
 
 fn main() {
     let matches = App::new("fastkmers")
+        .version("0.1.2")
         .author("https://github.com/angelovangel")
         .about("get k-mer counts and multiplicity frequency from a fastq file")
 
@@ -95,7 +96,7 @@ fn main() {
         for result in reader.records(){
             reads += 1;
 
-            let record = result.expect("Error");
+            let record = result.expect("Error reading records in file. Use '-a' if file is fasta");
             let seq = record.seq();
             let seq_str = str::from_utf8(seq).unwrap().to_string();
             //println!("{:?}", seq);
@@ -113,7 +114,7 @@ fn main() {
         for result in reader.records(){
             reads += 1;
 
-            let record = result.expect("Error");
+            let record = result.expect("Error reading records in file. Use '-a' if file is fasta.");
             let seq = record.seq();
             let seq_str = str::from_utf8(seq).unwrap().to_string();
             //println!("{:?}", seq);