diff --git a/src/vonFoersterHazards.ipynb b/src/vonFoersterHazards.ipynb index c82e736..837c4bd 100644 --- a/src/vonFoersterHazards.ipynb +++ b/src/vonFoersterHazards.ipynb @@ -50,7 +50,13 @@ "\n", "## Methods\n", "\n", - "In general when we are unable to observe or model every transition, such as when the integral of the hazard rate is taken over a duration larger than the smallest [characteristic dwelling time](https://en.wikipedia.org/wiki/Relaxation_%28physics%29) of the states, the probability density matrix requires calculation of the [adjoint derivative](https://en.wikipedia.org/wiki/Derivative_of_the_exponential_map) of the cumulative probability matrix, where the dot is the [currying](https://en.wikipedia.org/wiki/Currying) application of $\\operatorname{ad}_X Y=XY-YX$, the [adjoint operator](https://en.wikipedia.org/wiki/Adjoint_representation), to the parenthesized hazard rate $H$:\n", + "In general when we are unable to observe or model every transition, such as when the integral of the hazard rate is taken over a duration larger than the smallest [characteristic dwelling time](https://en.wikipedia.org/wiki/Relaxation_%28physics%29) of the states, the probability density matrix requires calculation of the [adjoint derivative](https://en.wikipedia.org/wiki/Derivative_of_the_exponential_map) of the cumulative probability matrix, where the dot is the [currying](https://en.wikipedia.org/wiki/Currying) application of the [adjoint operator](https://en.wikipedia.org/wiki/Adjoint_representation):\n", + "\n", + "$$\n", + "\\operatorname{ad}_X Y=XY-YX\n", + "$$\n", + "\n", + "to the parenthesized hazard rate $H$:\n", "\n", "$$\n", "\\operatorname{\\mathbb{P}}\\left[ T_{i \\rightarrow j} = t \\right] = \\operatorname{\\left[ \\frac{e^{-\\operatorname{ad}_{\\int_0^t H ds} \\cdot} - 1}{\\operatorname{ad}_{\\int_0^t H ds} \\cdot} \\right]} \\left(H\\right) e^{- \\int_0^t H ds}\n", @@ -109,7 +115,7 @@ }, { "cell_type": "code", - "execution_count": 1, + "execution_count": 18, "metadata": {}, "outputs": [], "source": [