From 847b74ff683e08b2af32b7d7ea6b4164517a7d0f Mon Sep 17 00:00:00 2001
From: Chris Orwa <chrisorwa@gmail.com>
Date: Sun, 17 Nov 2024 14:47:53 +0300
Subject: [PATCH] add changes

---
 man/est.incidence.by.Rd | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/man/est.incidence.by.Rd b/man/est.incidence.by.Rd
index fa1e4383..821b8eb5 100644
--- a/man/est.incidence.by.Rd
+++ b/man/est.incidence.by.Rd
@@ -11,7 +11,7 @@ est.incidence.by(
   strata,
   curve_strata_varnames = strata,
   noise_strata_varnames = strata,
-  antigen_isos = unique(pop_data),
+  antigen_isos = pop_data \%>\% pull("antigen_iso") \%>\% unique(),
   lambda_start = 0.1,
   build_graph = FALSE,
   num_cores = 1L,
@@ -24,6 +24,7 @@ est.incidence.by(
 \item{pop_data}{a \link{data.frame} with cross-sectional serology data per
 antibody and age, and additional columns corresponding to
 each element of the \code{strata} input}
+
 \item{curve_params}{a \code{\link[=data.frame]{data.frame()}} containing MCMC samples of parameters
 from the Bayesian posterior distribution of a longitudinal decay curve model.
 The parameter columns must be named: