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DESCRIPTION
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DESCRIPTION
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Package: ggPMX
Title: 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models
Description: At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling
activities in order to reduce the overall effort required for generating such plots.
For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox,
called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient
for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP
<doi:10.1002/psp4.12161>. While not required, you can get/install the 'R' 'lixoftConnectors'
package in the 'Monolix' installation, as described at the following url
<https://monolix.lixoft.com/monolix-api/lixoftconnectors_installation/>.
When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required
Chart Data instead of exporting it from the 'Monolix' gui.
Version: 1.2.11.9000
Authors@R: c(
person("Amine", "Gassem", email="contact@ag-study.com", role=c("aut")),
person("Bruno", "Bieth", email="biethb@hotmail.com", role="aut"),
person("Irina", "Baltcheva", email="irina.baltcheva@gmail.com", role="aut"),
person("Thomas", "Dumortier", email=" thomas.dumortier@novartis.com", role="aut"),
person("Christian", "Bartels", email="christian.bartels@novartis.com", role="aut"),
person("Souvik", "Bhattacharya", email="souvik.bhattacharya@novartis.com", role="aut"),
person("Inga", "Ludwig", email="inga.ludwig@novartis.com", role="aut"),
person("Ines", "Paule", email="ines.paule@novartis.com", role="aut"),
person("Didier", "Renard", email="didier.renard@novartis.com", role="aut"),
person("Matthew","Fidler", role = c("aut", "cre"), email = "matt.fidler@novartis.com", comment=c(ORCID="0000-0001-8538-6691")),
person("Seid", "Hamzic", email = "se.hamzic@gmail.com",role ="aut"),
person("Benjamin", "Guiastrennec", email = "guiastrennec@gmail.com",role ="ctb"),
person("Kyle T", "Baron", email = "kyleb@metrumrg.com",role ="ctb", comment = c(ORCID = "0000-0001-7252-5656")),
person("Qing Xi", "Ooi", email="ooi.qingxi@gmail.com", role="ctb"),
person("Novartis Pharma AG", role = c("cph"))
)
URL: https://github.com/ggPMXdevelopment/ggPMX
BugReports: https://github.com/ggPMXdevelopment/ggPMX/issues
Depends:
R (>= 3.5)
Imports:
data.table,
yaml,
R6,
gtable,
ggplot2 (>= 3.4.0),
ggforce,
magrittr,
stringr,
assertthat,
GGally,
zoo,
knitr,
rmarkdown,
tidyr,
dplyr,
purrr,
readr,
rlang,
checkmate,
scales
License: GPL-2
Suggests:
testthat,
xtable,
vdiffr,
rxode2,
nlmixr2,
nlmixr2data,
lixoftConnectors,
xgxr,
withr,
lifecycle
VignetteBuilder: knitr
NeedsCompilation: no
RoxygenNote: 7.2.3
Encoding: UTF-8