From 81f2e05a4fdaca067bafe36098cdecfb51d9deda Mon Sep 17 00:00:00 2001
From: Kohulan <kohulan.rajan@uni-jena.de>
Date: Mon, 13 Mar 2023 13:52:04 +0100
Subject: [PATCH] fix: all flake8 errors

---
 app/dependencies.py       |  2 +-
 app/main.py               |  2 +-
 app/routers/chem.py       | 20 +++++++++++++-------
 app/routers/compose.py    |  2 +-
 app/routers/converters.py |  2 +-
 5 files changed, 17 insertions(+), 11 deletions(-)

diff --git a/app/dependencies.py b/app/dependencies.py
index f9344c8..a376df2 100644
--- a/app/dependencies.py
+++ b/app/dependencies.py
@@ -1 +1 @@
-from fastapi import Header, HTTPException
+# from fastapi import Header, HTTPException
diff --git a/app/main.py b/app/main.py
index ff10ea5..85fef24 100644
--- a/app/main.py
+++ b/app/main.py
@@ -1,4 +1,4 @@
-from fastapi import Depends, FastAPI
+from fastapi import FastAPI
 
 # from .config import settings
 from .routers import converters, chem, compose
diff --git a/app/routers/chem.py b/app/routers/chem.py
index 60fc259..a496aeb 100644
--- a/app/routers/chem.py
+++ b/app/routers/chem.py
@@ -1,11 +1,10 @@
 from fastapi import Request, APIRouter
 from typing import Optional
 from rdkit import Chem
-import base64
 import requests
 from urllib.request import urlopen
 from urllib.parse import urlsplit
-import mimetypes
+
 # from ..database import db
 # from fastapi_pagination import Page, add_pagination, paginate
 from rdkit.Chem.EnumerateStereoisomers import (
@@ -69,6 +68,7 @@ async def smiles_stereoisomers(smiles: Optional[str]):
     return smilesArray
 
 
+"""
 @router.get("/search/{smiles}")
 async def smiles_search(smiles: Optional[str]):
     if smiles:
@@ -80,6 +80,7 @@ async def smiles_search(smiles: Optional[str]):
         )
         rows = paginate(curs.fetchall())
         return rows
+"""
 
 
 @router.post("/standardise")
@@ -176,23 +177,28 @@ async def extract_chemicalinfo(request: Request):
     reference = body["reference"]
     split = urlsplit(image_path)
     filename = "/tmp/" + split.path.split("/")[-1]
-    if 'img' in body:
+    if "img" in body:
         imgDataURI = body["img"]
         if imgDataURI:
             response = urlopen(imgDataURI)
-            with open(filename, 'wb') as f:
+            with open(filename, "wb") as f:
                 f.write(response.file.read())
                 smiles = predict_SMILES(filename)
                 os.remove(filename)
-                return JSONResponse(content={ "reference" :  reference, "smiles": smiles.split(".")})
+                return JSONResponse(
+                    content={"reference": reference, "smiles": smiles.split(".")}
+                )
     else:
         response = requests.get(image_path)
         if response.status_code == 200:
-            with open(filename, 'wb') as f:
+            with open(filename, "wb") as f:
                 f.write(response.content)
                 smiles = predict_SMILES(filename)
                 os.remove(filename)
-                return JSONResponse(content={ "reference" :  reference, "smiles": smiles.split(".")})
+                return JSONResponse(
+                    content={"reference": reference, "smiles": smiles.split(".")}
+                )
+
 
 # @app.get("/molecules/", response_model=List[schemas.Molecule])
 # def read_molecules(skip: int = 0, limit: int = 100, db: Session = Depends(get_db)):
diff --git a/app/routers/compose.py b/app/routers/compose.py
index 3ac8810..c55ee46 100644
--- a/app/routers/compose.py
+++ b/app/routers/compose.py
@@ -1,4 +1,4 @@
-from fastapi import APIRouter, Depends, HTTPException
+from fastapi import APIRouter
 
 router = APIRouter(
     prefix="/compose",
diff --git a/app/routers/converters.py b/app/routers/converters.py
index 88fffd3..5be16e3 100644
--- a/app/routers/converters.py
+++ b/app/routers/converters.py
@@ -1,4 +1,4 @@
-from fastapi import APIRouter, Depends, HTTPException
+from fastapi import APIRouter
 
 router = APIRouter(
     prefix="/converters",