diff --git a/docs/en/8-MicroSim/Additions.md b/docs/en/8-MicroSim/Additions.md index 05070bf8e..65226329c 100644 --- a/docs/en/8-MicroSim/Additions.md +++ b/docs/en/8-MicroSim/Additions.md @@ -1,8 +1,8 @@ ## Adding a New Model -**Note**: use a notebook with at least 4Gb of memory for this full guide. +**Note**: use a notebook with at least 6Gb of memory for this full guide. -First clone the model's repository or download and extract the archived model on your AAW notebook. In our example, we clone oncosim from gitlab: +First clone the model's repository or download and extract the archived model on your AAW notebook. In our example, we clone oncosim from [gitlab](../6-Gitlab/Gitlab.md): ![Oncosim dir is now available](image.png) @@ -14,14 +14,10 @@ We can follow the readme of the model. In this case, we set our `OM_ROOT` enviro We can now compile. We make sure that we're in the oncosim directory then run `make OM_MSG_USE=MPI RELEASE=1 all publish`. -Once compilation is complete, our compiled model files appear under `/ompp-linux/bin/`. Using the terminal, `cp` the files in the `bin` directory to `~/buckets/aaw-unclassified/microsim/models/bin`. +Once compilation is complete, our compiled model files appear under `/ompp-linux/bin/`. Using the terminal, `cp` the files in the `bin` directory to `~/buckets/aaw-unclassified/microsim/models/bin`. ![oncosim model files under bin](image-2.png) -Using the terminal, `cp -r ` the entire model directory to `~/buckets/aaw-unclassified/microsim/models` - -![oncosim under microsim](image-1.png) - Once complete, run `restart-oms.sh` in the terminal. This will restart the OpenM web service and allow it to pick up the new model. ![model in UI](image-3.png) \ No newline at end of file