From a7135041fae5f23de4aaa3bd8661ce07d1db1a6d Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Wed, 16 Jan 2019 16:49:33 +0100 Subject: [PATCH 1/2] update munin configuration --- conf/munin.config | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/conf/munin.config b/conf/munin.config index 0b78972776..136e4a9e8b 100644 --- a/conf/munin.config +++ b/conf/munin.config @@ -11,8 +11,8 @@ env { } params { - containerPath = '/btb/containers/' - genome_base = params.genome == 'GRCh37' ? '/btb/references/Homo_sapiens/GATK/GRCh37/' : params.genome == 'GRCh38' ? '/btb/references/Homo_sapiens/GATK/GRCh38/' : 'References/smallGRCh37' + containerPath = '/data0/btb/containers/' + genome_base = params.genome == 'GRCh37' ? '/data0/btb/references/igenomes/Homo_sapiens/GATK/GRCh37/' : params.genome == 'GRCh38' ? '/data0/btb/references/igenomes/Homo_sapiens/GATK/GRCh38/' : 'References/smallGRCh37' singleCPUMem = 15.GB totalMemory = 754.GB } From febecb3aa0259eea1cac49497b0325435cbcb6cb Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Thu, 17 Jan 2019 16:39:24 +0100 Subject: [PATCH 2/2] update CHANGELOG [skip ci] --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index aaf352769f..387d1d0ad3 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -11,6 +11,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. - [#710](https://github.com/SciLifeLab/Sarek/pull/710) - Improve release checklist and script - [#711](https://github.com/SciLifeLab/Sarek/pull/711) - Improve configuration priorities +- [#716](https://github.com/SciLifeLab/Sarek/pull/716) - Update paths to containers and iGenomes ## [2.2.2] - 2018-12-19