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fv3 changes for s2s one step cold start (NOAA-EMC#202)
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* add link_mpi=dbg for debug test
* add dbg_mt in debug option when OPENMP is on
* update log files for hera, orion, wcoss cray and dell; skip-ci
* update hera.gnu log file
* Set DEBUG_LINKMPI=OFF for cheyenne.intel and gaea.intel; fix post library dependencies for cheyenne.{intel,gnu} gnumake config
* Regression test log for cheyenne.intel

Co-authored-by: Jun Wang <junwang-noaa@users.noreply.github.com>
Co-authored-by: Dom Heinzeller <climbfuji@ymail.com>
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@junwang-noaa @climbfuji
3 people committed Sep 16, 2020
1 parent 60d3ae2 commit a31bb7c
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Showing 17 changed files with 2,887 additions and 2,833 deletions.
2 changes: 2 additions & 0 deletions CMakeLists.txt
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Expand Up @@ -22,6 +22,7 @@ set(AVX2 ON CACHE BOOL "Enable AVX2 instruction set")
set(SIMDMULTIARCH OFF CACHE BOOL "Enable multi-target SIMD instruction sets")
set(CCPP ON CACHE BOOL "Enable CCPP")
set(DEBUG OFF CACHE BOOL "Enable DEBUG mode")
set(DEBUG_LINKMPI ON CACHE BOOL "Enable linkmpi option when DEBUG mode is on")
set(INLINE_POST OFF CACHE BOOL "Enable inline post")
set(MULTI_GASES OFF CACHE BOOL "Enable MULTI_GASES")
set(OPENMP ON CACHE BOOL "Enable OpenMP threading")
Expand All @@ -46,6 +47,7 @@ message("AVX2 ............. ${AVX2}")
message("SIMDMULTIARCH ${SIMDMULTIARCH}")
message("CCPP ............. ${CCPP}")
message("DEBUG ............ ${DEBUG}")
message("DEBUG_LINKMPI .... ${DEBUG_LINKMPI}")
message("INLINE_POST ...... ${INLINE_POST}")
message("MULTI_GASES ...... ${MULTI_GASES}")
message("OPENMP ........... ${OPENMP}")
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2 changes: 1 addition & 1 deletion FV3
Submodule FV3 updated 4 files
+13 −4 atmos_model.F90
+103 −20 cpl/module_cap_cpl.F90
+3 −1 cpl/module_cplfields.F90
+35 −9 fv3_cap.F90
7 changes: 7 additions & 0 deletions cmake/Intel.cmake
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Expand Up @@ -40,6 +40,13 @@ if(REPRO)
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O2 -debug minimal")
elseif(DEBUG)
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -g -O0 -check -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv")
if(DEBUG_LINKMPI)
if(OPENMP)
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -link_mpi=dbg_mt")
else()
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -link_mpi=dbg")
endif()
endif()
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O0 -g -ftrapuv -traceback")
else()
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -O2 -debug minimal -fp-model source -qoverride-limits -qopt-prefetch=3")
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1 change: 1 addition & 0 deletions cmake/configure_cheyenne.intel.cmake
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@@ -1 +1,2 @@
set(INLINE_POST ON CACHE BOOL "Enable inline post" FORCE)
set(DEBUG_LINKMPI OFF CACHE BOOL "Enable linkmpi option when DEBUG mode is on" FORCE)
1 change: 1 addition & 0 deletions cmake/configure_gaea.intel.cmake
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@@ -1 +1,2 @@
set(INLINE_POST ON CACHE BOOL "Enable inline post" FORCE)
set(DEBUG_LINKMPI OFF CACHE BOOL "Enable linkmpi option when DEBUG mode is on" FORCE)
1 change: 1 addition & 0 deletions cmake/configure_wcoss_cray.cmake
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@@ -1,2 +1,3 @@
set(INLINE_POST ON CACHE BOOL "Enable inline post" FORCE)
set(PARALLEL_NETCDF ON CACHE BOOL "Enable parallel NetCDF" FORCE)
set(DEBUG_LINKMPI OFF CACHE BOOL "Enable linkmpi option when DEBUG mode is on" FORCE)
3 changes: 2 additions & 1 deletion conf/configure.fv3.cheyenne.gnu
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Expand Up @@ -63,7 +63,8 @@ include $(ESMFMKFILE)
ESMF_INC = $(ESMF_F90COMPILEPATHS)

NEMSIOINC = -I$(NEMSIO_INC)
NCEPLIBS = $(NEMSIO_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd)
NCEPLIBS = $(POST_LIB) $(NEMSIO_LIB) $(G2_LIB4) $(G2TMPL_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd) $(CRTM_LIB) -lpng -ljasper -lz
# $(PNG_LIB) $(JASPER_LIB) $(Z_LIB)

##############################################
# Need to use at least GNU Make version 3.81 #
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5 changes: 3 additions & 2 deletions conf/configure.fv3.cheyenne.intel
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Expand Up @@ -63,7 +63,8 @@ include $(ESMFMKFILE)
ESMF_INC = $(ESMF_F90COMPILEPATHS)

NEMSIOINC = -I$(NEMSIO_INC)
NCEPLIBS = $(NEMSIO_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd)
NCEPLIBS = $(POST_LIB) $(NEMSIO_LIB) $(G2_LIB4) $(G2TMPL_LIB) $(BACIO_LIB4) $(SP_LIBd) $(W3EMC_LIBd) $(W3NCO_LIBd) $(CRTM_LIB) -lpng -ljasper -lz
# $(PNG_LIB) $(JASPER_LIB) $(Z_LIB)

##############################################
# Need to use at least GNU Make version 3.81 #
Expand Down Expand Up @@ -131,7 +132,7 @@ endif

FFLAGS_OPT = -O2 -debug minimal -fp-model source -qoverride-limits -qopt-prefetch=3
FFLAGS_REPRO = -O2 -debug minimal -fp-model consistent -qoverride-limits -g -traceback
FFLAGS_DEBUG = -g -O0 -check all -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv
FFLAGS_DEBUG = -g -O0 -check all -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv -link_mpi=dbg

TRANSCENDENTALS := -fast-transcendentals
FFLAGS_OPENMP = -qopenmp
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2 changes: 1 addition & 1 deletion conf/configure.fv3.hera.intel
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Expand Up @@ -111,7 +111,7 @@ endif

FFLAGS_OPT = -O2 -debug minimal -fp-model source -qoverride-limits -qopt-prefetch=3
FFLAGS_REPRO = -O2 -debug minimal -fp-model consistent -qoverride-limits -g -traceback
FFLAGS_DEBUG = -g -O0 -check all -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv
FFLAGS_DEBUG = -g -O0 -check all -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv -link_mpi=dbg

TRANSCENDENTALS := -fast-transcendentals
FFLAGS_OPENMP = -qopenmp
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2 changes: 1 addition & 1 deletion conf/configure.fv3.orion.intel
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Expand Up @@ -109,7 +109,7 @@ endif

FFLAGS_OPT = -O2 -debug minimal -fp-model source -qoverride-limits -qopt-prefetch=3
FFLAGS_REPRO = -O2 -debug minimal -fp-model consistent -qoverride-limits -g -traceback
FFLAGS_DEBUG = -g -O0 -check all -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv
FFLAGS_DEBUG = -g -O0 -check all -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv -link_mpi=dbg

TRANSCENDENTALS := -fast-transcendentals
FFLAGS_OPENMP = -qopenmp
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2 changes: 1 addition & 1 deletion conf/configure.fv3.wcoss_dell_p3
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Expand Up @@ -91,7 +91,7 @@ endif
#
FFLAGS_OPT = -O2 -debug minimal -fp-model source -qoverride-limits -qopt-prefetch=3
FFLAGS_REPRO = -O2 -debug minimal -fp-model consistent -qoverride-limits -g -traceback
FFLAGS_DEBUG = -g -O0 -check -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv
FFLAGS_DEBUG = -g -O0 -check -check noarg_temp_created -check nopointer -warn -warn noerrors -fp-stack-check -fstack-protector-all -fpe0 -debug -traceback -ftrapuv -link_mpi=dbg

TRANSCENDENTALS := -fast-transcendentals
FFLAGS_OPENMP = -qopenmp
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