DESCRIPTION

Package: echolocatoR
Type: Package
Title: Automated genomic fine-mapping
Version: 2.0.3
Authors@R: 
    c(person(given = "Brian",
           family = "Schilder",
           role = c("cre"),
           email = "brian_schilder@alumni.brown.edu",
           comment = c(ORCID = "0000-0001-5949-2191")),
    person(given = "Jack",
           family = "Humphrey",
           role = c("aut"),
           email = "Jack.Humphrey@mssm.edu",
           comment = c(ORCID = "0000-0002-6274-6620")),
    person(given = "Towfique",
           family = "Raj",
           role = c("aut"),
           email = "towfique.raj@mssm.edu",
           comment = c(ORCID = "0000-0002-9355-5704"))
           ) 
Description: Automated statistical and functional fine-mapping 
  with extensive access to genome-wide datasets.  
License: GPL-3
URL: https://github.com/RajLabMSSM/echolocatoR
BugReports: https://github.com/RajLabMSSM/echolocatoR/issues
Encoding: UTF-8
Depends: R (>= 4.1)
biocViews:
    Genetics, FunctionalGenomics, SystemsBiology
Imports: 
    echoconda,
    downloadR,
    echodata,
    echotabix,
    echoannot,
    catalogueR,
    echoLD,
    echofinemap,
    echoplot, 
    data.table,
    methods,
    stringr,
    lifecycle,
    cli,
    utf8,
    scales
Suggests:
    MungeSumstats (>= 1.3.14),
    echodeps,
    echogithub,
    BiocStyle,
    remotes,
    rmarkdown,
    knitr,
    testthat (>= 3.0.0),
    ggplot2,
    patchwork,
    rworkflows
Remotes:
  github::RajLabMSSM/echoconda,
  github::RajLabMSSM/downloadR,
  github::RajLabMSSM/echogithub,
  github::RajLabMSSM/echodata,
  github::RajLabMSSM/echotabix,
  github::RajLabMSSM/echoannot,
  github::RajLabMSSM/catalogueR,
  github::RajLabMSSM/echoLD,
  github::RajLabMSSM/echofinemap,
  github::RajLabMSSM/echoplot,
  github::RajLabMSSM/echodeps,
  github::neurogenomics/rworkflows
RoxygenNote: 7.2.2
VignetteBuilder: knitr 
Config/testthat/edition: 3