DESCRIPTION

Package: echodata
Type: Package
Title: echoverse module: Fine-mapping data access and formatting
Version: 0.99.17
Authors@R: 
    c(person(given = "Brian",
           family = "Schilder",
           role = c("aut","cre"),
           email = "brian_schilder@alumni.brown.edu",
           comment = c(ORCID = "0000-0001-5949-2191")),
    person(given = "Jack",
           family = "Humphrey",
           role = c("aut"),
           email = "Jack.Humphrey@mssm.edu",
           comment = c(ORCID = "0000-0002-6274-6620")),
    person(given = "Towfique",
           family = "Raj",
           role = c("aut"),
           email = "towfique.raj@mssm.edu",
           comment = c(ORCID = "0000-0002-9355-5704"))
           ) 
Description: echoverse module: Examples of fine-mapped GWAS summary statistics, data formatting functions, and API access to the echolocatoR Fine-mapping Portal.
URL: https://github.com/RajLabMSSM/echodata
BugReports: https://github.com/RajLabMSSM/echodata/issues
Encoding: UTF-8
LazyData: true
Depends: R (>= 4.1)
SystemRequirements:
    xml2
biocViews:
    Genetics, FunctionalGenomics, SystemsBiology
Imports: 
    dplyr,
    data.table,
    R.utils, 
    methods,
    utils,
    tools,
    tidyr,
    parallel,
    openxlsx,
    DT,
    readr,
    piggyback,
    MungeSumstats (>= 1.3.14)
Suggests:
    markdown,
    rmarkdown,
    remotes,
    knitr,
    BiocStyle,
    covr,
    testthat (>= 3.0.0),
    htmltools,
    badger,
    BSgenome,
    GenomicRanges,
    GenomeInfoDb,
    SNPlocs.Hsapiens.dbSNP144.GRCh37,
    SNPlocs.Hsapiens.dbSNP144.GRCh38,
    biomaRt, 
    arrow,  
    ggplot2,
    echogithub,
    orthogene
Remotes:
    github::neurogenomics/MungeSumstats,
    github::RajLabMSSM/echogithub
RoxygenNote: 7.2.3
VignetteBuilder: knitr
License: GPL-3
Config/testthat/edition: 3