-
Notifications
You must be signed in to change notification settings - Fork 6
/
Copy pathchain_schedule.hpp
233 lines (228 loc) · 7.09 KB
/
chain_schedule.hpp
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
#ifndef CHAIN_SCHEDULE_HPP
#define CHAIN_SCHEDULE_HPP
// broadcast data by MPI send-recv communication
#include <mpi.h>
#include <cstdlib> // size_t
#include <cstdio>
#include "timer.hpp"
struct ChainSchedule {
// a manger class for MPI send-recv based broadcast.
// this uses very naiive algorithm, but works fine if you set good parameters.
static int constexpr smax = 8; // maximum number of on-going communications
static size_t constexpr minchunk_size = 1024;// * 1024; // minimum size of chunks; data are separed in chunks.
int id, np;
MPI_Comm comm;
int prev, next;
struct ReqBuf {
static int constexpr nmax = 256; // maximum number of on-going MPI_Requests.
MPI_Request reqs[nmax];
int icomplete, isend, irecv;
bool done() const { return icomplete == irecv; }
bool full() const { return irecv - icomplete == nmax; }
MPI_Request* recvtop() { return &reqs[irecv%nmax]; }
MPI_Request* sendtop() { return &reqs[isend%nmax]; }
MPI_Request* compltop() { return &reqs[icomplete%nmax]; }
void clear() { icomplete = isend = irecv = 0; }
} reqs;
struct Data{
static int constexpr maxnchunks = 100;
char* ptr;
size_t size;
size_t chunk_size;
int root;
int nsend;
int isend, irecv, nchunks;
void set(char* ptr_, size_t size_, int root_, int nsend_) {
ptr = ptr_;
size = size_;
root = root_;
nsend = nsend_;
isend = irecv = 0;
if(size_<minchunk_size*maxnchunks){
chunk_size = minchunk_size;
nchunks = (size_+minchunk_size-1)/minchunk_size;
}
else {
chunk_size = (size+maxnchunks-1)/maxnchunks;
nchunks = (size+chunk_size-1)/chunk_size;
}
nchunks *= nsend;
}
bool recv(char*& start, size_t& cursize) {
if(chunk_size*irecv >= size)
start = NULL;
else {
start = ptr + chunk_size * irecv;
cursize = chunk_size*irecv + chunk_size < size ? chunk_size: size - chunk_size*irecv;
}
++irecv;
return irecv == nchunks;
}
bool send(char*& start, size_t& cursize) {
int t = isend/nsend;
if(chunk_size*t >= size)
start = NULL;
else {
start = ptr + chunk_size*t;
cursize = chunk_size*t + chunk_size < size ? chunk_size: size - chunk_size*t;
}
++isend;
return isend == nchunks;
}
} data[smax];
int isend, irecv, iend;
ChainSchedule(MPI_Comm comm): comm(comm){
MPI_Comm_rank(comm, &id);
MPI_Comm_size(comm, &np);
clear();
prev = id==0 ? np-1: id-1;
next = id==np-1 ? 0: id+1;
}
int idfrom(int id, int np, int root){
int end = np/2;
int tid = (id < root ? id + np - root: id - root);
return (tid <= end? prev: next);
}
bool recv(){
//if(irecv >= iend || iend >= smax) fprintf(stderr, "recv oor %d %d %d\n", isend, irecv ,iend);
char* ptr;
size_t size;
bool completed = data[irecv].recv(ptr, size);
//fprintf(stderr, "recv %d %d %d :: %d %d\n", isend, irecv ,iend, data[irecv].size, data[irecv].root);
if(!ptr || id == data[irecv].root)
*reqs.recvtop() = MPI_REQUEST_NULL;
else {
int from = idfrom(id, np, data[irecv].root);
//fprintf(stderr, "recvc %d %d %d :: %d %d %d %d\n", isend, irecv ,iend, data[irecv].size, data[irecv].root, from, np);
MPI_Irecv(ptr, size, MPI_BYTE, from, 0 , comm, reqs.recvtop());
}
++reqs.irecv;
if(completed) {
++irecv;
return true;
}
else
return false;
}
int idto(int id, int np, int root){
int end = np/2;
int tid = (id<root ? id+np-root: id-root);
if(tid < end) return next;
else if(tid > end+1) return prev;
else return -1;
}
bool send(){
//if(isend >= iend || iend >= smax) fprintf(stderr, "send oor %d %d %d\n", isend, irecv ,iend);
char* ptr;
size_t size;
bool completed = data[isend].send(ptr, size);
//fprintf(stderr, "send %d %d %d :: %d %d\n", isend, irecv ,iend, data[isend].size, data[isend].root);
if(!ptr) *reqs.sendtop() = MPI_REQUEST_NULL;
else if(id == data[isend].root){
int to = (data[isend].nsend==1 ? next: (data[isend].isend%2 ? next: prev));
//fprintf(stderr, "sendr %d %d %d :: %d %d %d %d\n", isend, irecv ,iend, data[isend].size, data[isend].root, to, np);
MPI_Isend(ptr, size, MPI_BYTE, to, 0, comm, reqs.sendtop());
}
else{
int to = idto(id, np, data[isend].root);
//fprintf(stderr, "sendc %d %d %d :: %d %d %d %d\n", isend, irecv ,iend, data[isend].size, data[isend].root, to, np);
//if(to!=-1) MPI_Send(ptr, size, MPI_BYTE, to, 20000 + to, comm);
//*reqs.sendtop() = MPI_REQUEST_NULL;
if(to!=-1) MPI_Isend(ptr, size, MPI_BYTE, to, 0, comm, reqs.sendtop());
else *reqs.sendtop() = MPI_REQUEST_NULL;
}
++reqs.isend;
if(completed){
++isend;
return true;
}
else
return false;
}
void schedule(char* ptr, size_t size, int root=-1){
// broadcast (or receive) data in resion ptr[0:size-1] from root
// the number of on-going broadcasts are limited ~ 3. Call force_wait() if the communications are done.
if(np<=1) return;
if(root == -1) root = id;
if(size) {
data[iend].set(ptr, size, root, (np>2 && id==root) ? 2: 1);
++iend;
}
progress();
}
bool done() const {
// is all the communication is done
return isend == iend && reqs.done();
}
bool detached() const { return done(); }
bool progress(bool timer=true){
// progress communication. repeatedly call this method until !done().
if(done()) return true;
//fprintf(stderr, "progs %d %d %d :: %d %d %d\n", isend, irecv ,iend, reqs.icomplete, reqs.isend, reqs.irecv);
if(timer) Timer::beg(Timer::TEST);
bool changed = false;
do{
changed = false;
while(reqs.isend < reqs.irecv){
int flag;
MPI_Test(reqs.sendtop(), &flag, MPI_STATUS_IGNORE);
if(flag) {
changed = true;
send();
}
else break;
}
while(reqs.icomplete < reqs.isend) {
int flag;
MPI_Test(reqs.compltop(), &flag, MPI_STATUS_IGNORE);
if(flag){
changed = true;
++reqs.icomplete;
}
else break;
}
while(irecv < iend && !reqs.full()){ changed=true; recv(); }
} while(changed);
if(timer) Timer::end(Timer::TEST);
//fprintf(stderr, "proge %d %d %d :: %d %d %d\n", isend, irecv ,iend, reqs.icomplete, reqs.isend, reqs.irecv);
return done();
}
void force_complete(){
// call progress() untill !done()
// XXX this can cause deadlock. Use wait_all() below to avoid it.
//fprintf(stderr, "forcs %d %d %d :: %d %d %d\n", isend, irecv ,iend, reqs.icomplete, reqs.isend, reqs.irecv);
Timer::beg(Timer::WAIT);
while(!done()){
if(reqs.isend < reqs.irecv){
MPI_Wait(reqs.sendtop(), MPI_STATUS_IGNORE);
send();
}
if(reqs.icomplete < reqs.isend) {
MPI_Wait(reqs.compltop(), MPI_STATUS_IGNORE);
++reqs.icomplete;
}
while(irecv < iend && !reqs.full()) recv();
}
//fprintf(stderr, "force %d %d %d :: %d %d %d\n", isend, irecv ,iend, reqs.icomplete, reqs.isend, reqs.irecv);
Timer::end(Timer::WAIT);
clear();
}
void clear() {
// clear contexts before next schedule.
isend = irecv = iend = 0;
reqs.clear();
}
};
void wait_all(ChainSchedule& lhs, ChainSchedule& rhs)
{
// force wait two CSs. calling them separately will result in deadlock.
Timer::beg(Timer::WAIT);
while(!lhs.done() && !rhs.done()){
if(lhs.progress(false)) break;
if(rhs.progress(false)) break;
}
Timer::end(Timer::WAIT);
lhs.force_complete();
rhs.force_complete();
}
#endif