Merge pull request galaxyproject#5007 from galaxyproject/aged-plot

Final tweaks to mTB course

ORGANISATIONS.yaml

@@ -77,6 +77,7 @@ eu:
 
 find:
     name: FIND
+    description: The Foundation for Innovative New Diagnostics
     url: https://www.finddx.org/
     avatar: "/training-material/shared/images/FIND.png"
     github: false

bin/filter-pyolite-safe

@@ -1,12 +1,13 @@
 #!/usr/bin/env ruby
 # frozen_string_literal: true
 
+require './_plugins/util'
 require 'yaml'
 require 'find'
 
 Find.find('topics/').each do |fn|
   if File.basename(fn) == 'tutorial.md'
-    data = YAML.load_file(fn)
+    data = safe_load_yaml(fn)
     if data.key?('notebook') && (data['notebook'].key? 'pyolite')
       parts = fn.split('/')
       puts "_site/training-material/#{parts[0..-2].join('/')}/#{parts[1]}-#{parts[3]}.ipynb"

bin/prepare_feedback.rb

@@ -1,6 +1,7 @@
 #!/usr/bin/env ruby
 # frozen_string_literal: true
 
+require './_plugins/util'
 require 'yaml'
 require 'csv'
 
@@ -37,12 +38,12 @@ def lookup_tuto(topic_id, tuto_id)
 
     file = "topics/#{topic_id}/tutorials/#{tuto_id}/tutorial.md"
     if File.exist? file
-      data = YAML.load_file(file)
+      data = safe_load_yaml(file)
       @cache[key] = data['title']
     else
       file = "topics/#{topic_id}/tutorials/#{tuto_id}/slides.html"
       if File.exist? file
-        data = YAML.load_file(file)
+        data = safe_load_yaml(file)
         @cache[key] = data['title']
       else
         puts "No file for #{topic_id}/#{tuto_id}"
@@ -57,7 +58,7 @@ def lookup_topic(topic_id)
     file = "metadata/#{topic_id}.yaml"
     return nil unless File.exist? file
 
-    data = YAML.load_file(file)
+    data = safe_load_yaml(file)
     @cache[key] = data['title']
   end
 end

events/2024-06-10-mtb-ngs.html

@@ -32,6 +32,7 @@
   - pangens
   - irccs
   - linq
+  - find
   - panacea
   - edctp
   - edctp-eu
@@ -536,6 +537,9 @@
 
 ## Communication
 
+- Chat on Slack channel [#event-mtb-ngs](https://gtnsmrgsbord.slack.com/?redir=%2Farchives%2FC01MNM98X9V%3Fname%3DC01MNM98X9V) (see "Setup" for instructions)
+- Scheduled Questions & Answer sessions (Q&A) on [Zoom](https://swisstph.zoom.us/j/88614333103?pwd=OVVjeG04a2lVMXB0THUxMXoxNUNkdz09)
+
 A Slack channel will allow participants to communicate in real-time via chat. The channel should be used to troubleshoot and to get to know each other.
 There will be scheduled zoom sessions (Q&A) every day where you can meet the experts, discuss and ask questions (check the program to know the time and be aware of the difference in time zone).
 If you are in Asia you can attend the zoom sessions in the morning, if you are in America you can attend the sessions in the afternoon, no need to be there all the time.