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Updated waveica for new outputs from recetox-aplcms #378

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merged 8 commits into from
Jun 23, 2023
Merged

Updated waveica for new outputs from recetox-aplcms #378

merged 8 commits into from
Jun 23, 2023

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zargham-ahmad
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This PR includes the following:

  • Added data transpose option so the new outputs from recetox-aplcms can be used
  • Added verify_column_types function to check if the columns are of the correct type
  • Added test and testdata for transpose case
  • Fixed some param calls in the test (filter_length -> wavelet_length)
  • added group var in waveica_singlebatch function which was not there but used
  • Bump version

closes #365

@hechth hechth requested a review from xtrojak June 22, 2023 12:27
hechth
hechth reviewed Jun 22, 2023
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LGTM - only add WaveICA to bio.tools and then add the crossref here and we're done :)

@zargham-ahmad
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LGTM - only add WaveICA to bio.tools and then add the crossref here and we're done :)

added in a54098b

@zargham-ahmad zargham-ahmad mentioned this pull request Jun 22, 2023
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xtrojak
xtrojak approved these changes Jun 22, 2023
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Except minor issues looks good to me.

tools/waveica/waveica.xml Outdated Show resolved Hide resolved
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@hechth hechth merged commit 77bea6c into RECETOX:master Jun 23, 2023
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@zargham-ahmad zargham-ahmad deleted the issue365 branch December 20, 2023 13:38
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check and update waveica for new outputs from recetox-aplcms and RAMClustR
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@zargham-ahmad @hechth @xtrojak