GitHub_Actions_CI.yaml

# CI GitHub Action ... adapted from usethis::use_github_actions()
on:
  push:
    branches:
      - dev_*
      - master
  pull_request:
    branches:
      - master
      - dev_*

name: GitHub Actions CI

## change if caches needs to be refreshed
env:
  cache-version: v1

jobs:
  R-CMD-check:
    runs-on: ${{ matrix.config.os }}
    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
    strategy:
      fail-fast: false
      matrix:
        config:
        - {os: macos-13,   r: 'release', not_cran: 'true'}
        - {os: macos-12,   r: 'oldrel',  not_cran: 'true'}
        - {os: ubuntu-latest,   r: 'devel', not_cran: 'true',}
        - {os: ubuntu-latest,   r: 'release', not_cran: 'true'}
        - {os: ubuntu-latest,   r: 'oldrel', not_cran: 'true'}

    env:
      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
      RSPM: ${{ matrix.config.rspm }}
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

    steps:
      - uses: actions/checkout@v4

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}
          http-user-agent: ${{ matrix.config.http-user-agent }}

      - uses: r-lib/actions/setup-pandoc@v2

      - name: Cache R packages
        if: runner.os != 'Windows'
        uses: actions/cache@v2
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

     - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: |
            any::rcmdcheck
            any::covr
          needs: check

      - uses: r-lib/actions/check-r-package@v2
        with:
          upload-snapshots: true

      - name: Test coverage
        run: |
          covr::codecov(
            quiet = FALSE,
            clean = TRUE,
            token = "${{ secrets.CODECOV_TOKEN }}",
            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
          )
        shell: Rscript {0}

      - name: Show testthat output
        if: always()
        run: |
          ## --------------------------------------------------------------------
          find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
        shell: bash

      - name: Upload test results
        if: failure()
        uses: actions/upload-artifact@v4
        with:
          name: coverage-test-failures
          path: ${{ runner.temp }}/package