diff --git a/NEWS b/NEWS index db9274506..7a293e454 100644 --- a/NEWS +++ b/NEWS @@ -4,7 +4,7 @@ Changes in version 0.4.6 (21st September, 2015): • This update is fixing only one specific issue that causes a warning message on the CRAN servers (and on packages that - inversely importing this package), due the way the protoype - for the ‘RLum.Data.Image’ object was constructed ('rgdal' - issue). + inversely importing this package), due to the way the + protoype for the ‘RLum.Data.Image’ object was constructed + ('rgdal' issue). diff --git a/R/Luminescence-package.R b/R/Luminescence-package.R index d57dbc266..ecd0784a9 100644 --- a/R/Luminescence-package.R +++ b/R/Luminescence-package.R @@ -6,7 +6,7 @@ #' plotting of equivalent dose distributions. #' #' \tabular{ll}{ Package: \tab Luminescence\cr Type: \tab Package\cr Version: -#' \tab 0.4.6\cr Date: \tab 2015-09-13\cr License: \tab GPL-3\cr } +#' \tab 0.4.6\cr Date: \tab 2015-09-21\cr License: \tab GPL-3\cr } #' #' @name Luminescence-package #' @aliases Luminescence-package Luminescence diff --git a/R/analyse_SAR.CWOSL.R b/R/analyse_SAR.CWOSL.R index e8f6b065f..6cec72ee0 100644 --- a/R/analyse_SAR.CWOSL.R +++ b/R/analyse_SAR.CWOSL.R @@ -78,7 +78,7 @@ #' \code{plot = TRUE}. #' #' @param \dots further arguments that will be passed to the function -#' \code{\link{plot_GrowthCurve}} or \code{\link{calc_OSLLxTxRatio}} +#' \code{\link{plot_GrowthCurve}} (e.g., \code{fit.method}) or \code{\link{calc_OSLLxTxRatio}} #' (supported: \code{background.count.distribution} and \code{sigmab}) #' #' diff --git a/RLum.BuildResults/Luminescence-Ex.pdf b/RLum.BuildResults/Luminescence-Ex.pdf index 37fbcfe6e..45d011e53 100644 Binary files a/RLum.BuildResults/Luminescence-Ex.pdf and b/RLum.BuildResults/Luminescence-Ex.pdf differ diff --git a/RLum.BuildResults/Luminescence-TimingExamples.0.4.6.pdf b/RLum.BuildResults/Luminescence-TimingExamples.0.4.6.pdf index 55d181f95..7b02af496 100644 Binary files a/RLum.BuildResults/Luminescence-TimingExamples.0.4.6.pdf and b/RLum.BuildResults/Luminescence-TimingExamples.0.4.6.pdf differ diff --git a/RLum.BuildResults/Luminescence-manual.pdf b/RLum.BuildResults/Luminescence-manual.pdf index 453fb78d5..959188486 100644 Binary files a/RLum.BuildResults/Luminescence-manual.pdf and b/RLum.BuildResults/Luminescence-manual.pdf differ diff --git a/RLum.BuildResults/Luminescence_0.4.6-Functions.csv b/RLum.BuildResults/Luminescence_0.4.6-Functions.csv index a1f918068..851d1972a 100644 --- a/RLum.BuildResults/Luminescence_0.4.6-Functions.csv +++ b/RLum.BuildResults/Luminescence_0.4.6-Functions.csv @@ -1,56 +1,56 @@ "Name","Title","Description","Version","m.Date","m.Time","Author" -"analyse_IRSAR.RF","Analyse IRSAR RF measurements","
Function to analyse IRSAR RF measurements on K-feldspar samples, performed
using the protocol according to Erfurt et al. (2003) and beyond.
","0.4.0","2015-09-13","10:44:05 +"analyse_IRSAR.RF","Analyse IRSAR RF measurements","
Function to analyse IRSAR RF measurements on K-feldspar samples, performed
using the protocol according to Erfurt et al. (2003) and beyond.
","0.4.0","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team" -"analyse_pIRIRSequence","Analyse post-IR IRSL sequences","
The function performs an analysis of post-IR IRSL sequences including curve
fitting on RLum.Analysis objects.
","0.1.4","2015-09-13","10:44:05 +"analyse_pIRIRSequence","Analyse post-IR IRSL sequences","
The function performs an analysis of post-IR IRSL sequences including curve
fitting on RLum.Analysis objects.
","0.1.4","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"analyse_SAR.CWOSL","Analyse SAR CW-OSL measurements","
The function performs a SAR CW-OSL analysis on an
RLum.Analysis object including growth curve fitting.
","0.5.3","2015-09-13","10:44:05 +"analyse_SAR.CWOSL","Analyse SAR CW-OSL measurements","
The function performs a SAR CW-OSL analysis on an
RLum.Analysis object including growth curve fitting.
","0.5.3","2015-09-21","15:43:27 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"Analyse_SAR.OSLdata","Analyse SAR CW-OSL measurements.","
The function analyses SAR CW-OSL curve data and provides a summary of the
measured data for every position. The output of the function is optimised
for SAR OSL measurements on quartz.
","0.2.16","2015-09-13","10:44:05 +"Analyse_SAR.OSLdata","Analyse SAR CW-OSL measurements.","
The function analyses SAR CW-OSL curve data and provides a summary of the
measured data for every position. The output of the function is optimised
for SAR OSL measurements on quartz.
","0.2.16","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Margret C. Fuchs, TU Bergakademie Freiberg
(Germany)
R Luminescence Package Team" -"analyse_SAR.TL","Analyse SAR TL measurements","
The function performs a SAR TL analysis on a
RLum.Analysis object including growth curve fitting.
","0.1.4","2015-09-13","10:44:05 +"analyse_SAR.TL","Analyse SAR TL measurements","
The function performs a SAR TL analysis on a
RLum.Analysis object including growth curve fitting.
","0.1.4","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team" -"apply_CosmicRayRemoval","Function to remove cosmic rays from an RLum.Data.Spectrum S4 class object","
The function provides several methods for cosmic ray removal and spectrum
smoothing for an RLum.Data.Spectrum S4 class object
","0.1.3","2015-09-13","10:44:05 +"apply_CosmicRayRemoval","Function to remove cosmic rays from an RLum.Data.Spectrum S4 class object","
The function provides several methods for cosmic ray removal and spectrum
smoothing for an RLum.Data.Spectrum S4 class object
","0.1.3","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"apply_EfficiencyCorrection","Function to apply spectral efficiency correction to RLum.Data.Spectrum S4
class objects","
The function allows spectral efficiency corrections for RLum.Data.Spectrum
S4 class objects
","0.1","2015-09-13","10:44:05 +"apply_EfficiencyCorrection","Function to apply spectral efficiency correction to RLum.Data.Spectrum S4
class objects","
The function allows spectral efficiency corrections for RLum.Data.Spectrum
S4 class objects
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Johannes Friedrich, University of Bayreuth (Germany)
R Luminescence Package Team" "BaseDataSet.CosmicDoseRate","Base data set for cosmic dose rate calculation","
Collection of data from various sources needed for cosmic dose rate
calculation
",NA,NA,NA,NA -"calc_AliquotSize","Estimate the amount of grains on an aliquot","
Estimate the number of grains on an aliquot. Alternatively, the packing
density of an aliquot is computed.
","0.31","2015-09-13","10:44:05 +"calc_AliquotSize","Estimate the amount of grains on an aliquot","
Estimate the number of grains on an aliquot. Alternatively, the packing
density of an aliquot is computed.
","0.31","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team" -"calc_CentralDose","Apply the central age model (CAM) after Galbraith et al. (1999) to a given
De distribution","
This function calculates the central dose and dispersion of the De
distribution, their standard errors and the profile log likelihood function
for sigma.
","1.3.1","2015-09-13","10:44:05 +"calc_CentralDose","Apply the central age model (CAM) after Galbraith et al. (1999) to a given
De distribution","
This function calculates the central dose and dispersion of the De
distribution, their standard errors and the profile log likelihood function
for sigma.
","1.3.1","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2010
R Luminescence Package Team" -"calc_CommonDose","Apply the (un-)logged common age model after Galbraith et al. (1999) to a
given De distribution","
Function to calculate the common dose of a De distribution.
","0.1","2015-09-13","10:44:05 +"calc_CommonDose","Apply the (un-)logged common age model after Galbraith et al. (1999) to a
given De distribution","
Function to calculate the common dose of a De distribution.
","0.1","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team" -"calc_CosmicDoseRate","Calculate the cosmic dose rate","
This function calculates the cosmic dose rate taking into account the soft-
and hard-component of the cosmic ray flux and allows corrections for
geomagnetic latitude, altitude above sea-level and geomagnetic field
changes.
","0.5.2","2015-09-13","10:44:05 +"calc_CosmicDoseRate","Calculate the cosmic dose rate","
This function calculates the cosmic dose rate taking into account the soft-
and hard-component of the cosmic ray flux and allows corrections for
geomagnetic latitude, altitude above sea-level and geomagnetic field
changes.
","0.5.2","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team" -"calc_FadingCorr","Apply a fading correction according to Huntley & Lamothe (2001) for a given
g-value.","
This function runs the iterations that are needed to calculate the corrected
age including the error for a given g-value according to Huntley & Lamothe
(2001).
","0.3.0","2015-09-13","10:44:05 +"calc_FadingCorr","Apply a fading correction according to Huntley & Lamothe (2001) for a given
g-value.","
This function runs the iterations that are needed to calculate the corrected
age including the error for a given g-value according to Huntley & Lamothe
(2001).
","0.3.0","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
R Luminescence Package Team" -"calc_FiniteMixture","Apply the finite mixture model (FMM) after Galbraith (2005) to a given De
distribution","
This function fits a k-component mixture to a De distribution with differing
known standard errors. Parameters (doses and mixing proportions) are
estimated by maximum likelihood assuming that the log dose estimates are
from a mixture of normal distributions.
","0.4","2015-09-13","10:44:05 +"calc_FiniteMixture","Apply the finite mixture model (FMM) after Galbraith (2005) to a given De
distribution","
This function fits a k-component mixture to a De distribution with differing
known standard errors. Parameters (doses and mixing proportions) are
estimated by maximum likelihood assuming that the log dose estimates are
from a mixture of normal distributions.
","0.4","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2006.
R Luminescence Package Team" -"calc_FuchsLang2001","Apply the model after Fuchs & Lang (2001) to a given De distribution.","
This function applies the method according to Fuchs & Lang (2001) for
heterogeneously bleached samples with a given coefficient of variation
threshold.
","0.4.1","2015-09-13","10:44:05 +"calc_FuchsLang2001","Apply the model after Fuchs & Lang (2001) to a given De distribution.","
This function applies the method according to Fuchs & Lang (2001) for
heterogeneously bleached samples with a given coefficient of variation
threshold.
","0.4.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France) Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team" -"calc_HomogeneityTest","Apply a simple homogeneity test after Galbraith (2003)","
A simple homogeneity test for De estimates
","0.2","2015-09-13","10:44:05 +"calc_HomogeneityTest","Apply a simple homogeneity test after Galbraith (2003)","
A simple homogeneity test for De estimates
","0.2","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team" -"calc_IEU","Apply the internal-external-uncertainty (IEU) model after Thomsen et al.
(2007) to a given De distribution","
Function to calculate the IEU De for a De data set.
","0.1.0","2015-09-13","10:44:05 +"calc_IEU","Apply the internal-external-uncertainty (IEU) model after Thomsen et al.
(2007) to a given De distribution","
Function to calculate the IEU De for a De data set.
","0.1.0","2015-09-21","15:05:38 ","
Rachel Smedley, Geography & Earth Sciences, Aberystwyth University
(United Kingdom) Based on an excel spreadsheet and accompanying macro
written by Kristina Thomsen.
R Luminescence Package Team" -"calc_MaxDose","Apply the maximum age model to a given De distribution","
Function to fit the maximum age model to De data. This is a wrapper function
that calls calc_MinDose() and applies a similiar approach as described in
Olley et al. (2006).
","0.3","2015-09-13","10:44:05 +"calc_MaxDose","Apply the maximum age model to a given De distribution","
Function to fit the maximum age model to De data. This is a wrapper function
that calls calc_MinDose() and applies a similiar approach as described in
Olley et al. (2006).
","0.3","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2010
R Luminescence Package Team" -"calc_MinDose","Apply the (un-)logged minimum age model (MAM) after Galbraith et al. (1999)
to a given De distribution","
Function to fit the (un-)logged three or four parameter minimum dose model
(MAM-3/4) to De data.
","0.4.1","2015-09-13","10:44:05 +"calc_MinDose","Apply the (un-)logged minimum age model (MAM) after Galbraith et al. (1999)
to a given De distribution","
Function to fit the (un-)logged three or four parameter minimum dose model
(MAM-3/4) to De data.
","0.4.1","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2010 The bootstrap approach is
based on a rewritten MATLAB script of Alastair Cunningham. Alastair
Cunningham is thanked for his help in implementing and cross-checking the
code.
R Luminescence Package Team" -"calc_OSLLxTxRatio","Calculate Lx/Tx ratio for CW-OSL curves","
Calculate Lx/Tx ratios from a given set of CW-OSL curves.
","0.5.1","2015-09-13","10:44:05 +"calc_OSLLxTxRatio","Calculate Lx/Tx ratio for CW-OSL curves","
Calculate Lx/Tx ratios from a given set of CW-OSL curves.
","0.5.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"calc_SourceDoseRate","Calculation of the source dose rate via the date of measurement","
Calculating the dose rate of the irradiation source via the date of
measurement based on: source calibration date, source dose rate, dose rate
error. The function returns a data.frame that provides the input argument
dose_rate for the function Second2Gray .
","0.2.0","2015-09-13","10:44:05 +"calc_SourceDoseRate","Calculation of the source dose rate via the date of measurement","
Calculating the dose rate of the irradiation source via the date of
measurement based on: source calibration date, source dose rate, dose rate
error. The function returns a data.frame that provides the input argument
dose_rate for the function Second2Gray .
","0.2.0","2015-09-21","15:05:38 ","
Margret C. Fuchs, HZDR, Helmholtz-Institute Freiberg for Resource Technology (Germany),
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team" -"calc_Statistics","Function to calculate statistic measures","
This function calculates a number of descriptive statistics for De-data,
most fundamentally using error-weighted approaches.
","0.1.3","2015-09-13","10:44:05 +"calc_Statistics","Function to calculate statistic measures","
This function calculates a number of descriptive statistics for De-data,
most fundamentally using error-weighted approaches.
","0.1.3","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team" -"calc_TLLxTxRatio","Calculate the Lx/Tx ratio for a given set of TL curves [beta version]","
Calculate Lx/Tx ratio for a given set of TL curves.
","0.3.0","2015-09-13","10:44:05 +"calc_TLLxTxRatio","Calculate the Lx/Tx ratio for a given set of TL curves [beta version]","
Calculate Lx/Tx ratio for a given set of TL curves.
","0.3.0","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
#' (France), Christoph Schmidt, University of Bayreuth (Germany)
R Luminescence Package Team" -"CW2pHMi","Transform a CW-OSL curve into a pHM-OSL curve via interpolation under
hyperbolic modulation conditions","
This function transforms a conventionally measured continuous-wave (CW)
OSL-curve to a pseudo hyperbolic modulated (pHM) curve under hyperbolic
modulation conditions using the interpolation procedure described by Bos &
Wallinga (2012).
","0.2.2","2015-09-13","10:44:05 +"CW2pHMi","Transform a CW-OSL curve into a pHM-OSL curve via interpolation under
hyperbolic modulation conditions","
This function transforms a conventionally measured continuous-wave (CW)
OSL-curve to a pseudo hyperbolic modulated (pHM) curve under hyperbolic
modulation conditions using the interpolation procedure described by Bos &
Wallinga (2012).
","0.2.2","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France) Based on comments and suggestions from: Adrie J.J. Bos,
Delft University of Technology, The Netherlands
R Luminescence Package Team" -"CW2pLM","Transform a CW-OSL curve into a pLM-OSL curve","
Transforms a conventionally measured continuous-wave (CW) curve into a
pseudo linearly modulated (pLM) curve using the equations given in Bulur
(2000).
","0.4.1","2015-09-13","10:44:05 +"CW2pLM","Transform a CW-OSL curve into a pLM-OSL curve","
Transforms a conventionally measured continuous-wave (CW) curve into a
pseudo linearly modulated (pLM) curve using the equations given in Bulur
(2000).
","0.4.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"CW2pLMi","Transform a CW-OSL curve into a pLM-OSL curve via interpolation under linear
modulation conditions","
Transforms a conventionally measured continuous-wave (CW) OSL-curve into a
pseudo linearly modulated (pLM) curve under linear modulation conditions
using the interpolation procedure described by Bos & Wallinga (2012).
","0.3.1","2015-09-13","10:44:05 +"CW2pLMi","Transform a CW-OSL curve into a pLM-OSL curve via interpolation under linear
modulation conditions","
Transforms a conventionally measured continuous-wave (CW) OSL-curve into a
pseudo linearly modulated (pLM) curve under linear modulation conditions
using the interpolation procedure described by Bos & Wallinga (2012).
","0.3.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux
Montaigne Based on comments and suggestions from: Adrie J.J. Bos,
Delft University of Technology, The Netherlands
R Luminescence Package Team" -"CW2pPMi","Transform a CW-OSL curve into a pPM-OSL curve via interpolation under
parabolic modulation conditions","
Transforms a conventionally measured continuous-wave (CW) OSL-curve into a
pseudo parabolic modulated (pPM) curve under parabolic modulation conditions
using the interpolation procedure described by Bos & Wallinga (2012).
","0.2.1","2015-09-13","10:44:05 +"CW2pPMi","Transform a CW-OSL curve into a pPM-OSL curve via interpolation under
parabolic modulation conditions","
Transforms a conventionally measured continuous-wave (CW) OSL-curve into a
pseudo parabolic modulated (pPM) curve under parabolic modulation conditions
using the interpolation procedure described by Bos & Wallinga (2012).
","0.2.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France) Based on comments and suggestions from: Adrie J.J. Bos,
Delft University of Technology, The Netherlands
R Luminescence Package Team" "ExampleData.BINfileData","Example data from a SAR OSL and SAR TL measurement for the package
Luminescence","
Example data from a SAR OSL and TL measurement for package Luminescence
directly extracted from a Risoe BIN-file and provided in an object of type
Risoe.BINfileData-class
",NA,NA,NA,NA "ExampleData.CW_OSL_Curve","Example CW-OSL curve data for the package Luminescence","
data.frame containing CW-OSL curve data (time, counts)
",NA,NA,NA,NA @@ -61,69 +61,69 @@ "ExampleData.RLum.Analysis","Example data as RLum.Analysis objects","
Collection of different RLum.Analysis objects for
protocol analysis.
",NA,NA,NA,NA "ExampleData.RLum.Data.Image","Example data as RLum.Data.Image objects","
Measurement of Princton Instruments camera imported with the function
readSPE2R to R to produce an
RLum.Data.Image object.
",NA,NA,NA,NA "ExampleData.XSYG","Example data for a SAR OSL measurement and a TL spectrum using a lexsyg
reader","
Example data from a SAR OSL measurement and a TL spectrum for package
Luminescence imported from a Freiberg Instruments XSYG file using the
function readXSYG2R .
",NA,NA,NA,NA -"extract_IrradiationTimes","Extract irradiation times from an XSYG file","
Extracts irradiation times, dose and times since last irradiation, from a
Freiberg Instruments XSYG-file. These information can be further used to
update an existing BINX-file
","0.2.1","2015-09-13","10:44:05 +"extract_IrradiationTimes","Extract irradiation times from an XSYG file","
Extracts irradiation times, dose and times since last irradiation, from a
Freiberg Instruments XSYG-file. These information can be further used to
update an existing BINX-file
","0.2.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"fit_CWCurve","Nonlinear Least Squares Fit for CW-OSL curves [beta version]","
The function determines the weighted least-squares estimates of the
component parameters of a CW-OSL signal for a given maximum number of
components and returns various component parameters. The fitting procedure
uses the nls function with the port algorithm.
","0.5.1","2015-09-13","10:44:05 +"fit_CWCurve","Nonlinear Least Squares Fit for CW-OSL curves [beta version]","
The function determines the weighted least-squares estimates of the
component parameters of a CW-OSL signal for a given maximum number of
components and returns various component parameters. The fitting procedure
uses the nls function with the port algorithm.
","0.5.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"fit_LMCurve","Nonlinear Least Squares Fit for LM-OSL curves","
The function determines weighted nonlinear least-squares estimates of the
component parameters of an LM-OSL curve (Bulur 1996) for a given number of
components and returns various component parameters. The fitting procedure
uses the function nls with the port algorithm.
","0.2.17","2015-09-13","10:44:05 +"fit_LMCurve","Nonlinear Least Squares Fit for LM-OSL curves","
The function determines weighted nonlinear least-squares estimates of the
component parameters of an LM-OSL curve (Bulur 1996) for a given number of
components and returns various component parameters. The fitting procedure
uses the function nls with the port algorithm.
","0.2.17","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"get_Layout","Collection of layout definitions","
This helper function returns a list with layout definitions for homogeneous
plotting.
","0.1","2015-09-13","10:44:05 +"get_Layout","Collection of layout definitions","
This helper function returns a list with layout definitions for homogeneous
plotting.
","0.1","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team" -"get_Quote","Function to return essential quotes","
This function returns one of the collected essential quotes in the
growing library. If called without any parameters, a random quote is
returned.
","0.1.1","2015-09-13","10:44:05 +"get_Quote","Function to return essential quotes","
This function returns one of the collected essential quotes in the
growing library. If called without any parameters, a random quote is
returned.
","0.1.1","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team" -"get_Risoe.BINfileData","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RisoeBINfileData S4 class objects.
","0.1","2015-09-13","10:44:05 +"get_Risoe.BINfileData","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RisoeBINfileData S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"get_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1","2015-09-13","10:44:05 +"get_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"length_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1","2015-09-13","10:44:05 +"length_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"merge_Risoe.BINfileData","Merge Risoe.BINfileData objects or Risoe BIN-files","
Function allows merging Risoe BIN/BINX files or Risoe.BINfileData objects.
","0.2.3","2015-09-13","10:44:05 +"merge_Risoe.BINfileData","Merge Risoe.BINfileData objects or Risoe BIN-files","
Function allows merging Risoe BIN/BINX files or Risoe.BINfileData objects.
","0.2.3","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"merge_RLum.Analysis","Merge function for RLum.Analysis S4 class objects","
Function allows merging of RLum.Analysis objects and adding of allowed
objects to an RLum.Analysis.
","0.1","2015-09-13","10:44:05 +"merge_RLum.Analysis","Merge function for RLum.Analysis S4 class objects","
Function allows merging of RLum.Analysis objects and adding of allowed
objects to an RLum.Analysis.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"merge_RLum.Data.Curve","Merge function for RLum.Data.Curve S4 class objects","
Function allows merging of RLum.Data.Curve objects in different ways
","0.1.1","2015-09-13","10:44:05 +"merge_RLum.Data.Curve","Merge function for RLum.Data.Curve S4 class objects","
Function allows merging of RLum.Data.Curve objects in different ways
","0.1.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"merge_RLum","General merge function for RLum S4 class objects","
Function calls object-specific merge functions for RLum S4 class objects.
","0.1","2015-09-13","10:44:05 +"merge_RLum","General merge function for RLum S4 class objects","
Function calls object-specific merge functions for RLum S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" "merge_RLum.Results","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1 ",NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"plot_AbanicoPlot","Function to create an Abanico Plot.","
A plot is produced which allows comprehensive presentation of data precision
and its dispersion around a central value as well as illustration of a
kernel density estimate, histogram and/or dot plot of the dose values.
","0.1.2","2015-09-13","10:44:05 +"plot_AbanicoPlot","Function to create an Abanico Plot.","
A plot is produced which allows comprehensive presentation of data precision
and its dispersion around a central value as well as illustration of a
kernel density estimate, histogram and/or dot plot of the dose values.
","0.1.2","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne (France) Inspired by a plot
introduced by Galbraith & Green (1990)
R Luminescence Package Team" -"plot_DRTResults","Visualise dose recovery test results","
The function provides a standardised plot output for dose recovery test
measurements.
","0.1.6","2015-09-13","10:44:05 +"plot_DRTResults","Visualise dose recovery test results","
The function provides a standardised plot output for dose recovery test
measurements.
","0.1.6","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team" -"plot_GrowthCurve","Fit and plot a growth curve for luminescence data (Lx/Tx against dose)","
A dose response curve is produced for luminescence measurements using a
regenerative protocol.
","1.6.1","2015-09-13","10:44:05 +"plot_GrowthCurve","Fit and plot a growth curve for luminescence data (Lx/Tx against dose)","
A dose response curve is produced for luminescence measurements using a
regenerative protocol.
","1.6.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team" -"plot_Histogram","Plot a histogram with separate error plot","
Function plots a predefined histogram with an accompanying error plot as
suggested by Rex Galbraith at the UK LED in Oxford 2010.
","0.4.4","2015-09-13","10:44:05 +"plot_Histogram","Plot a histogram with separate error plot","
Function plots a predefined histogram with an accompanying error plot as
suggested by Rex Galbraith at the UK LED in Oxford 2010.
","0.4.4","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team" -"plot_KDE","Plot kernel density estimate with statistics","
Plot a kernel density estimate of measurement values in combination with the
actual values and associated error bars in ascending order. Optionally,
statistical measures such as mean, median, standard deviation, standard
error and quartile range can be provided visually and numerically.
","3.5","2015-09-13","10:44:05 +"plot_KDE","Plot kernel density estimate with statistics","
Plot a kernel density estimate of measurement values in combination with the
actual values and associated error bars in ascending order. Optionally,
statistical measures such as mean, median, standard deviation, standard
error and quartile range can be provided visually and numerically.
","3.5","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne
R Luminescence Package Team" -"plot_RadialPlot","Function to create a Radial Plot","
A Galbraith's radial plot is produced on a logarithmic or a linear scale.
","0.5.3","2015-09-13","10:44:05 +"plot_RadialPlot","Function to create a Radial Plot","
A Galbraith's radial plot is produced on a logarithmic or a linear scale.
","0.5.3","2015-09-21","15:05:38 ","
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne (France) Based on a rewritten
S script of Rex Galbraith, 2010
R Luminescence Package Team" -"plot_Risoe.BINfileData","Plot single luminescence curves from a BIN file object","
Plots single luminescence curves from an object returned by the
readBIN2R function.
","0.4.1","2015-09-13","10:44:05 +"plot_Risoe.BINfileData","Plot single luminescence curves from a BIN file object","
Plots single luminescence curves from an object returned by the
readBIN2R function.
","0.4.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team" -"plot_RLum.Analysis","Plot function for an RLum.Analysis S4 class object","
The function provides a standardised plot output for curve data of an
RLum.Analysis S4 class object
","0.2.6","2015-09-13","10:44:05 +"plot_RLum.Analysis","Plot function for an RLum.Analysis S4 class object","
The function provides a standardised plot output for curve data of an
RLum.Analysis S4 class object
","0.2.6","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"plot_RLum.Data.Curve","Plot function for an RLum.Data.Curve S4 class object","
The function provides a standardised plot output for curve data of an
RLum.Data.Curve S4 class object
","0.1.5","2015-09-13","10:44:05 +"plot_RLum.Data.Curve","Plot function for an RLum.Data.Curve S4 class object","
The function provides a standardised plot output for curve data of an
RLum.Data.Curve S4 class object
","0.1.5","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"plot_RLum.Data.Image","Plot function for an RLum.Data.Image S4 class object","
The function provides a standardised plot output for image data of an
RLum.Data.Image S4 class object, mainly using the plot functions
provided by the raster package.
","0.1","2015-09-13","10:44:05 +"plot_RLum.Data.Image","Plot function for an RLum.Data.Image S4 class object","
The function provides a standardised plot output for image data of an
RLum.Data.Image S4 class object, mainly using the plot functions
provided by the raster package.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"plot_RLum.Data.Spectrum","Plot function for an RLum.Data.Spectrum S4 class object","
The function provides a standardised plot output for spectrum data of an
RLum.Data.Spectrum S4 class object
","0.4.0","2015-09-13","10:44:05 +"plot_RLum.Data.Spectrum","Plot function for an RLum.Data.Spectrum S4 class object","
The function provides a standardised plot output for spectrum data of an
RLum.Data.Spectrum S4 class object
","0.4.0","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"plot_RLum","General plot function for RLum S4 class objects","
Function calls object specific plot functions for RLum S4 class objects.
","0.4.0","2015-09-13","10:44:05 +"plot_RLum","General plot function for RLum S4 class objects","
Function calls object specific plot functions for RLum S4 class objects.
","0.4.0","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"plot_RLum.Results","Plot function for an RLum.Results S4 class object","
The function provides a standardised plot output for data of an RLum.Results
S4 class object
","0.1","2015-09-13","10:44:05 +"plot_RLum.Results","Plot function for an RLum.Results S4 class object","
The function provides a standardised plot output for data of an RLum.Results
S4 class object
","0.1","2015-09-21","15:05:38 ","
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team" -"readBIN2R","Import Risoe BIN-file into R","
Import a *.bin or a *.binx file produced by a Risoe DA15 and DA20 TL/OSL
reader into R.
","0.9.1","2015-09-13","10:44:05 +"readBIN2R","Import Risoe BIN-file into R","
Import a *.bin or a *.binx file produced by a Risoe DA15 and DA20 TL/OSL
reader into R.
","0.9.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Margret C. Fuchs, TU Bergakademie Freiberg (Germany)
R Luminescence Package Team" -"readSPE2R","Import Princeton Intruments (TM) SPE-file into R","
Function imports Princeton Instruments (TM) SPE-files into R environment and
provides RLum objects as output.
","0.1","2015-09-13","10:44:05 +"readSPE2R","Import Princeton Intruments (TM) SPE-file into R","
Function imports Princeton Instruments (TM) SPE-files into R environment and
provides RLum objects as output.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"readXSYG2R","Import XSYG files to R","
Imports XSYG files produced by a Freiberg Instrument lexsyg reader into R.
","0.4.5","2015-09-13","10:44:05 +"readXSYG2R","Import XSYG files to R","
Imports XSYG files produced by a Freiberg Instrument lexsyg reader into R.
","0.4.5","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" "Risoe.BINfileData-class","Class \"Risoe.BINfileData\"","
S4 class object for luminescence data in R. The object is produced as output
of the function readBIN2R .
","0.2.0 ",NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"Risoe.BINfileData2RLum.Analysis","Convert Risoe.BINfileData object to an RLum.Analysis object","
Converts values from one specific position of a Risoe.BINfileData S4-class
object to an RLum.Analysis object.
","0.1.2","2015-09-13","10:44:05 +"Risoe.BINfileData2RLum.Analysis","Convert Risoe.BINfileData object to an RLum.Analysis object","
Converts values from one specific position of a Risoe.BINfileData S4-class
object to an RLum.Analysis object.
","0.1.2","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team" -"Risoe.BINfileData2RLum.Data.Curve","Convert an element from a Risoe.BINfileData object to an RLum.Data.Curve
object","
The function converts one specified single record from a Risoe.BINfileData
object to an RLum.Data.Curve object.
","0.1.1","2015-09-13","10:44:05 +"Risoe.BINfileData2RLum.Data.Curve","Convert an element from a Risoe.BINfileData object to an RLum.Data.Curve
object","
The function converts one specified single record from a Risoe.BINfileData
object to an RLum.Data.Curve object.
","0.1.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team" "RLum-class","Class \"RLum\"","
Abstract class for data in the package Luminescence
",NA,NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
" "RLum.Analysis-class","Class \"RLum.Analysis\"","
Object class containing analysis data for protocol analysis.
",NA,NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
" @@ -132,14 +132,14 @@ "RLum.Data.Image-class","Class \"RLum.Data.Image\"","
Class for luminescence image data (TL/OSL/RF).
",NA,NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
" "RLum.Data.Spectrum-class","Class \"RLum.Data.Spectrum\"","
Class for luminescence spectra data (TL/OSL/RF).
",NA,NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
" "RLum.Results-class","Class \"RLum.Results\"","
Object class contains results data from functions.
",NA,NA,NA,"
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
" -"Second2Gray","Converting values from seconds (s) to gray (Gy)","
Conversion of absorbed radiation dose in seconds (s) to the SI unit gray
(Gy) including error propagation. Normally used for equivalent dose data.
","0.5.0","2015-09-13","10:44:05 +"Second2Gray","Converting values from seconds (s) to gray (Gy)","
Conversion of absorbed radiation dose in seconds (s) to the SI unit gray
(Gy) including error propagation. Normally used for equivalent dose data.
","0.5.0","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany), Margret C. Fuchs, HZDR,
Helmholtz-Institute Freiberg for Resource Technology
(Germany)
R Luminescence Package Team" -"set_Risoe.BINfileData","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RisoeBINfileData S4 class objects.
","0.1","2015-09-13","10:44:05 +"set_Risoe.BINfileData","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RisoeBINfileData S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"set_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific set functions for RLum S4 class objects.
","0.1","2015-09-13","10:44:05 +"set_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific set functions for RLum S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" "sTeve","sTeve - sophisticated tool for efficient data validation and evaluation","
This function provides a sophisticated routine for comprehensive
luminescence dating data analysis.
",NA,NA,NA,"
R Luminescence Team, 2012-2013
" -"structure_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1","2015-09-13","10:44:05 +"structure_RLum","General accessor function for RLum S4 class objects","
Function calls object-specific get functions for RLum S4 class objects.
","0.1","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" -"writeR2BIN","Export Risoe.BINfileData into Risoe BIN-file","
Exports a Risoe.BINfileData object in a *.bin or *.binx file that can be
opened by the Analyst software or other Risoe software.
","0.3.2","2015-09-13","10:44:05 +"writeR2BIN","Export Risoe.BINfileData into Risoe BIN-file","
Exports a Risoe.BINfileData object in a *.bin or *.binx file that can be
opened by the Analyst software or other Risoe software.
","0.3.2","2015-09-21","15:05:38 ","
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team" diff --git a/RLum.BuildResults/Luminescence_0.4.6-Functions.html b/RLum.BuildResults/Luminescence_0.4.6-Functions.html index b7b529ff4..16c66e3fa 100644 --- a/RLum.BuildResults/Luminescence_0.4.6-Functions.html +++ b/RLum.BuildResults/Luminescence_0.4.6-Functions.html @@ -63,9 +63,9 @@

[version: 0.4.6 ]

0.4.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team @@ -82,9 +82,9 @@

[version: 0.4.6 ]

0.1.4 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -101,9 +101,9 @@

[version: 0.4.6 ]

0.5.3 -2015-09-13 +2015-09-21 -10:44:05 +15:43:27
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -120,9 +120,9 @@

[version: 0.4.6 ]

0.2.16 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Margret C. Fuchs, TU Bergakademie Freiberg
(Germany)
R Luminescence Package Team @@ -139,9 +139,9 @@

[version: 0.4.6 ]

0.1.4 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team @@ -158,9 +158,9 @@

[version: 0.4.6 ]

0.1.3 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -177,9 +177,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Johannes Friedrich, University of Bayreuth (Germany)
R Luminescence Package Team @@ -214,9 +214,9 @@

[version: 0.4.6 ]

0.31 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team @@ -233,9 +233,9 @@

[version: 0.4.6 ]

1.3.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2010
R Luminescence Package Team @@ -252,9 +252,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team @@ -271,9 +271,9 @@

[version: 0.4.6 ]

0.5.2 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team @@ -290,9 +290,9 @@

[version: 0.4.6 ]

0.3.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
R Luminescence Package Team @@ -309,9 +309,9 @@

[version: 0.4.6 ]

0.4 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2006.
R Luminescence Package Team @@ -328,9 +328,9 @@

[version: 0.4.6 ]

0.4.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France) Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team @@ -347,9 +347,9 @@

[version: 0.4.6 ]

0.2 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team @@ -366,9 +366,9 @@

[version: 0.4.6 ]

0.1.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Rachel Smedley, Geography & Earth Sciences, Aberystwyth University
(United Kingdom) Based on an excel spreadsheet and accompanying macro
written by Kristina Thomsen.
R Luminescence Package Team @@ -385,9 +385,9 @@

[version: 0.4.6 ]

0.3 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2010
R Luminescence Package Team @@ -404,9 +404,9 @@

[version: 0.4.6 ]

0.4.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany) Based on a
rewritten S script of Rex Galbraith, 2010 The bootstrap approach is
based on a rewritten MATLAB script of Alastair Cunningham. Alastair
Cunningham is thanked for his help in implementing and cross-checking the
code.
R Luminescence Package Team @@ -423,9 +423,9 @@

[version: 0.4.6 ]

0.5.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -442,9 +442,9 @@

[version: 0.4.6 ]

0.2.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Margret C. Fuchs, HZDR, Helmholtz-Institute Freiberg for Resource Technology (Germany),
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team @@ -461,9 +461,9 @@

[version: 0.4.6 ]

0.1.3 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team @@ -480,9 +480,9 @@

[version: 0.4.6 ]

0.3.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
#' (France), Christoph Schmidt, University of Bayreuth (Germany)
R Luminescence Package Team @@ -499,9 +499,9 @@

[version: 0.4.6 ]

0.2.2 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France) Based on comments and suggestions from: Adrie J.J. Bos,
Delft University of Technology, The Netherlands
R Luminescence Package Team @@ -518,9 +518,9 @@

[version: 0.4.6 ]

0.4.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -537,9 +537,9 @@

[version: 0.4.6 ]

0.3.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux
Montaigne Based on comments and suggestions from: Adrie J.J. Bos,
Delft University of Technology, The Netherlands
R Luminescence Package Team @@ -556,9 +556,9 @@

[version: 0.4.6 ]

0.2.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France) Based on comments and suggestions from: Adrie J.J. Bos,
Delft University of Technology, The Netherlands
R Luminescence Package Team @@ -737,9 +737,9 @@

[version: 0.4.6 ]

0.2.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -756,9 +756,9 @@

[version: 0.4.6 ]

0.5.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -775,9 +775,9 @@

[version: 0.4.6 ]

0.2.17 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -794,9 +794,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team @@ -813,9 +813,9 @@

[version: 0.4.6 ]

0.1.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team @@ -832,9 +832,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -851,9 +851,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -870,9 +870,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -889,9 +889,9 @@

[version: 0.4.6 ]

0.2.3 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -908,9 +908,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -927,9 +927,9 @@

[version: 0.4.6 ]

0.1.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -946,9 +946,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -984,9 +984,9 @@

[version: 0.4.6 ]

0.1.2 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne (France) Inspired by a plot
introduced by Galbraith & Green (1990)
R Luminescence Package Team @@ -1003,9 +1003,9 @@

[version: 0.4.6 ]

0.1.6 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team @@ -1022,9 +1022,9 @@

[version: 0.4.6 ]

1.6.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team @@ -1041,9 +1041,9 @@

[version: 0.4.6 ]

0.4.4 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team @@ -1060,9 +1060,9 @@

[version: 0.4.6 ]

3.5 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne
R Luminescence Package Team @@ -1079,9 +1079,9 @@

[version: 0.4.6 ]

0.5.3 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,
IRAMAT-CRP2A, Universite Bordeaux Montaigne (France) Based on a rewritten
S script of Rex Galbraith, 2010
R Luminescence Package Team @@ -1098,9 +1098,9 @@

[version: 0.4.6 ]

0.4.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany)
R Luminescence Package Team @@ -1117,9 +1117,9 @@

[version: 0.4.6 ]

0.2.6 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1136,9 +1136,9 @@

[version: 0.4.6 ]

0.1.5 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1155,9 +1155,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1174,9 +1174,9 @@

[version: 0.4.6 ]

0.4.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1193,9 +1193,9 @@

[version: 0.4.6 ]

0.4.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1212,9 +1212,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Christoph Burow, University of Cologne (Germany)
R Luminescence Package Team @@ -1231,9 +1231,9 @@

[version: 0.4.6 ]

0.9.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Margret C. Fuchs, TU Bergakademie Freiberg (Germany)
R Luminescence Package Team @@ -1250,9 +1250,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1269,9 +1269,9 @@

[version: 0.4.6 ]

0.4.5 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1307,9 +1307,9 @@

[version: 0.4.6 ]

0.1.2 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team @@ -1326,9 +1326,9 @@

[version: 0.4.6 ]

0.1.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)
R Luminescence Package Team @@ -1471,9 +1471,9 @@

[version: 0.4.6 ]

0.5.0 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France), Michael Dietze, GFZ Potsdam (Germany), Margret C. Fuchs, HZDR,
Helmholtz-Institute Freiberg for Resource Technology
(Germany)
R Luminescence Package Team @@ -1490,9 +1490,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1509,9 +1509,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1546,9 +1546,9 @@

[version: 0.4.6 ]

0.1 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team @@ -1565,9 +1565,9 @@

[version: 0.4.6 ]

0.3.2 -2015-09-13 +2015-09-21 -10:44:05 +15:05:38
Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne
(France)
R Luminescence Package Team diff --git a/RLum.BuildResults/Luminescence_0.4.6-Functions.tex b/RLum.BuildResults/Luminescence_0.4.6-Functions.tex index 12cadfa63..ebaf4e879 100644 --- a/RLum.BuildResults/Luminescence_0.4.6-Functions.tex +++ b/RLum.BuildResults/Luminescence_0.4.6-Functions.tex @@ -1,63 +1,63 @@ -% latex table generated in R 3.2.2 by xtable 1.7-4 package -% Sun Sep 13 18:41:41 2015 +% latex table generated in R 3.3.0 by xtable 1.7-4 package +% Mon Sep 21 15:46:29 2015 \begin{table}[ht] \centering \begin{tabular}{rlllllll} \hline & Name & Title & Description & Version & m.Date & m.Time & Author \\ \hline -1 & analyse\_IRSAR.RF & Analyse IRSAR RF measurements & $<$br /$>$ Function to analyse IRSAR RF measurements on K-feldspar samples, performed$<$br /$>$ using the protocol according to Erfurt et al. (2003) and beyond.$<$br /$>$ & 0.4.0 & 2015-09-13 & 10:44:05 +1 & analyse\_IRSAR.RF & Analyse IRSAR RF measurements & $<$br /$>$ Function to analyse IRSAR RF measurements on K-feldspar samples, performed$<$br /$>$ using the protocol according to Erfurt et al. (2003) and beyond.$<$br /$>$ & 0.4.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ R Luminescence Package Team \\ - 2 & analyse\_pIRIRSequence & Analyse post-IR IRSL sequences & $<$br /$>$ The function performs an analysis of post-IR IRSL sequences including curve$<$br /$>$ fitting on RLum.Analysis objects.$<$br /$>$ & 0.1.4 & 2015-09-13 & 10:44:05 + 2 & analyse\_pIRIRSequence & Analyse post-IR IRSL sequences & $<$br /$>$ The function performs an analysis of post-IR IRSL sequences including curve$<$br /$>$ fitting on RLum.Analysis objects.$<$br /$>$ & 0.1.4 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 3 & analyse\_SAR.CWOSL & Analyse SAR CW-OSL measurements & $<$br /$>$ The function performs a SAR CW-OSL analysis on an$<$br /$>$ RLum.Analysis object including growth curve fitting.$<$br /$>$ & 0.5.3 & 2015-09-13 & 10:44:05 + 3 & analyse\_SAR.CWOSL & Analyse SAR CW-OSL measurements & $<$br /$>$ The function performs a SAR CW-OSL analysis on an$<$br /$>$ RLum.Analysis object including growth curve fitting.$<$br /$>$ & 0.5.3 & 2015-09-21 & 15:43:27 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 4 & Analyse\_SAR.OSLdata & Analyse SAR CW-OSL measurements. & $<$br /$>$ The function analyses SAR CW-OSL curve data and provides a summary of the$<$br /$>$ measured data for every position. The output of the function is optimised$<$br /$>$ for SAR OSL measurements on quartz.$<$br /$>$ & 0.2.16 & 2015-09-13 & 10:44:05 + 4 & Analyse\_SAR.OSLdata & Analyse SAR CW-OSL measurements. & $<$br /$>$ The function analyses SAR CW-OSL curve data and provides a summary of the$<$br /$>$ measured data for every position. The output of the function is optimised$<$br /$>$ for SAR OSL measurements on quartz.$<$br /$>$ & 0.2.16 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Margret C. Fuchs, TU Bergakademie Freiberg$<$br /$>$ (Germany)$<$br /$>$ R Luminescence Package Team \\ - 5 & analyse\_SAR.TL & Analyse SAR TL measurements & $<$br /$>$ The function performs a SAR TL analysis on a$<$br /$>$ RLum.Analysis object including growth curve fitting.$<$br /$>$ & 0.1.4 & 2015-09-13 & 10:44:05 + 5 & analyse\_SAR.TL & Analyse SAR TL measurements & $<$br /$>$ The function performs a SAR TL analysis on a$<$br /$>$ RLum.Analysis object including growth curve fitting.$<$br /$>$ & 0.1.4 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ R Luminescence Package Team \\ - 6 & apply\_CosmicRayRemoval & Function to remove cosmic rays from an RLum.Data.Spectrum S4 class object & $<$br /$>$ The function provides several methods for cosmic ray removal and spectrum$<$br /$>$ smoothing for an RLum.Data.Spectrum S4 class object$<$br /$>$ & 0.1.3 & 2015-09-13 & 10:44:05 + 6 & apply\_CosmicRayRemoval & Function to remove cosmic rays from an RLum.Data.Spectrum S4 class object & $<$br /$>$ The function provides several methods for cosmic ray removal and spectrum$<$br /$>$ smoothing for an RLum.Data.Spectrum S4 class object$<$br /$>$ & 0.1.3 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 7 & apply\_EfficiencyCorrection & Function to apply spectral efficiency correction to RLum.Data.Spectrum S4$<$br /$>$ class objects & $<$br /$>$ The function allows spectral efficiency corrections for RLum.Data.Spectrum$<$br /$>$ S4 class objects$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 7 & apply\_EfficiencyCorrection & Function to apply spectral efficiency correction to RLum.Data.Spectrum S4$<$br /$>$ class objects & $<$br /$>$ The function allows spectral efficiency corrections for RLum.Data.Spectrum$<$br /$>$ S4 class objects$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Johannes Friedrich, University of Bayreuth (Germany)$<$br /$>$ R Luminescence Package Team \\ 8 & BaseDataSet.CosmicDoseRate & Base data set for cosmic dose rate calculation & $<$br /$>$ Collection of data from various sources needed for cosmic dose rate$<$br /$>$ calculation$<$br /$>$ & & & & \\ - 9 & calc\_AliquotSize & Estimate the amount of grains on an aliquot & $<$br /$>$ Estimate the number of grains on an aliquot. Alternatively, the packing$<$br /$>$ density of an aliquot is computed.$<$br /$>$ & 0.31 & 2015-09-13 & 10:44:05 + 9 & calc\_AliquotSize & Estimate the amount of grains on an aliquot & $<$br /$>$ Estimate the number of grains on an aliquot. Alternatively, the packing$<$br /$>$ density of an aliquot is computed.$<$br /$>$ & 0.31 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany)$<$br /$>$ R Luminescence Package Team \\ - 10 & calc\_CentralDose & Apply the central age model (CAM) after Galbraith et al. (1999) to a given$<$br /$>$ De distribution & $<$br /$>$ This function calculates the central dose and dispersion of the De$<$br /$>$ distribution, their standard errors and the profile log likelihood function$<$br /$>$ for sigma.$<$br /$>$ & 1.3.1 & 2015-09-13 & 10:44:05 + 10 & calc\_CentralDose & Apply the central age model (CAM) after Galbraith et al. (1999) to a given$<$br /$>$ De distribution & $<$br /$>$ This function calculates the central dose and dispersion of the De$<$br /$>$ distribution, their standard errors and the profile log likelihood function$<$br /$>$ for sigma.$<$br /$>$ & 1.3.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany) Based on a$<$br /$>$ rewritten S script of Rex Galbraith, 2010 $<$br /$>$ R Luminescence Package Team \\ - 11 & calc\_CommonDose & Apply the (un-)logged common age model after Galbraith et al. (1999) to a$<$br /$>$ given De distribution & $<$br /$>$ Function to calculate the common dose of a De distribution.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 11 & calc\_CommonDose & Apply the (un-)logged common age model after Galbraith et al. (1999) to a$<$br /$>$ given De distribution & $<$br /$>$ Function to calculate the common dose of a De distribution.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany)$<$br /$>$ R Luminescence Package Team \\ - 12 & calc\_CosmicDoseRate & Calculate the cosmic dose rate & $<$br /$>$ This function calculates the cosmic dose rate taking into account the soft-$<$br /$>$ and hard-component of the cosmic ray flux and allows corrections for$<$br /$>$ geomagnetic latitude, altitude above sea-level and geomagnetic field$<$br /$>$ changes.$<$br /$>$ & 0.5.2 & 2015-09-13 & 10:44:05 + 12 & calc\_CosmicDoseRate & Calculate the cosmic dose rate & $<$br /$>$ This function calculates the cosmic dose rate taking into account the soft-$<$br /$>$ and hard-component of the cosmic ray flux and allows corrections for$<$br /$>$ geomagnetic latitude, altitude above sea-level and geomagnetic field$<$br /$>$ changes.$<$br /$>$ & 0.5.2 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany)$<$br /$>$ R Luminescence Package Team \\ - 13 & calc\_FadingCorr & Apply a fading correction according to Huntley \& Lamothe (2001) for a given$<$br /$>$ g-value. & $<$br /$>$ This function runs the iterations that are needed to calculate the corrected$<$br /$>$ age including the error for a given g-value according to Huntley \& Lamothe$<$br /$>$ (2001).$<$br /$>$ & 0.3.0 & 2015-09-13 & 10:44:05 + 13 & calc\_FadingCorr & Apply a fading correction according to Huntley \& Lamothe (2001) for a given$<$br /$>$ g-value. & $<$br /$>$ This function runs the iterations that are needed to calculate the corrected$<$br /$>$ age including the error for a given g-value according to Huntley \& Lamothe$<$br /$>$ (2001).$<$br /$>$ & 0.3.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ R Luminescence Package Team \\ - 14 & calc\_FiniteMixture & Apply the finite mixture model (FMM) after Galbraith (2005) to a given De$<$br /$>$ distribution & $<$br /$>$ This function fits a k-component mixture to a De distribution with differing$<$br /$>$ known standard errors. Parameters (doses and mixing proportions) are$<$br /$>$ estimated by maximum likelihood assuming that the log dose estimates are$<$br /$>$ from a mixture of normal distributions.$<$br /$>$ & 0.4 & 2015-09-13 & 10:44:05 + 14 & calc\_FiniteMixture & Apply the finite mixture model (FMM) after Galbraith (2005) to a given De$<$br /$>$ distribution & $<$br /$>$ This function fits a k-component mixture to a De distribution with differing$<$br /$>$ known standard errors. Parameters (doses and mixing proportions) are$<$br /$>$ estimated by maximum likelihood assuming that the log dose estimates are$<$br /$>$ from a mixture of normal distributions.$<$br /$>$ & 0.4 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany) Based on a$<$br /$>$ rewritten S script of Rex Galbraith, 2006. $<$br /$>$ R Luminescence Package Team \\ - 15 & calc\_FuchsLang2001 & Apply the model after Fuchs \& Lang (2001) to a given De distribution. & $<$br /$>$ This function applies the method according to Fuchs \& Lang (2001) for$<$br /$>$ heterogeneously bleached samples with a given coefficient of variation$<$br /$>$ threshold.$<$br /$>$ & 0.4.1 & 2015-09-13 & 10:44:05 + 15 & calc\_FuchsLang2001 & Apply the model after Fuchs \& Lang (2001) to a given De distribution. & $<$br /$>$ This function applies the method according to Fuchs \& Lang (2001) for$<$br /$>$ heterogeneously bleached samples with a given coefficient of variation$<$br /$>$ threshold.$<$br /$>$ & 0.4.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France) Christoph Burow, University of Cologne (Germany)$<$br /$>$ R Luminescence Package Team \\ - 16 & calc\_HomogeneityTest & Apply a simple homogeneity test after Galbraith (2003) & $<$br /$>$ A simple homogeneity test for De estimates$<$br /$>$ & 0.2 & 2015-09-13 & 10:44:05 + 16 & calc\_HomogeneityTest & Apply a simple homogeneity test after Galbraith (2003) & $<$br /$>$ A simple homogeneity test for De estimates$<$br /$>$ & 0.2 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany)$<$br /$>$ R Luminescence Package Team \\ - 17 & calc\_IEU & Apply the internal-external-uncertainty (IEU) model after Thomsen et al.$<$br /$>$ (2007) to a given De distribution & $<$br /$>$ Function to calculate the IEU De for a De data set.$<$br /$>$ & 0.1.0 & 2015-09-13 & 10:44:05 + 17 & calc\_IEU & Apply the internal-external-uncertainty (IEU) model after Thomsen et al.$<$br /$>$ (2007) to a given De distribution & $<$br /$>$ Function to calculate the IEU De for a De data set.$<$br /$>$ & 0.1.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Rachel Smedley, Geography \& Earth Sciences, Aberystwyth University$<$br /$>$ (United Kingdom) Based on an excel spreadsheet and accompanying macro$<$br /$>$ written by Kristina Thomsen.$<$br /$>$ R Luminescence Package Team \\ - 18 & calc\_MaxDose & Apply the maximum age model to a given De distribution & $<$br /$>$ Function to fit the maximum age model to De data. This is a wrapper function$<$br /$>$ that calls calc\_MinDose() and applies a similiar approach as described in$<$br /$>$ Olley et al. (2006).$<$br /$>$ & 0.3 & 2015-09-13 & 10:44:05 + 18 & calc\_MaxDose & Apply the maximum age model to a given De distribution & $<$br /$>$ Function to fit the maximum age model to De data. This is a wrapper function$<$br /$>$ that calls calc\_MinDose() and applies a similiar approach as described in$<$br /$>$ Olley et al. (2006).$<$br /$>$ & 0.3 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany) Based on a$<$br /$>$ rewritten S script of Rex Galbraith, 2010 $<$br /$>$ R Luminescence Package Team \\ - 19 & calc\_MinDose & Apply the (un-)logged minimum age model (MAM) after Galbraith et al. (1999)$<$br /$>$ to a given De distribution & $<$br /$>$ Function to fit the (un-)logged three or four parameter minimum dose model$<$br /$>$ (MAM-3/4) to De data.$<$br /$>$ & 0.4.1 & 2015-09-13 & 10:44:05 + 19 & calc\_MinDose & Apply the (un-)logged minimum age model (MAM) after Galbraith et al. (1999)$<$br /$>$ to a given De distribution & $<$br /$>$ Function to fit the (un-)logged three or four parameter minimum dose model$<$br /$>$ (MAM-3/4) to De data.$<$br /$>$ & 0.4.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany) Based on a$<$br /$>$ rewritten S script of Rex Galbraith, 2010 The bootstrap approach is$<$br /$>$ based on a rewritten MATLAB script of Alastair Cunningham. Alastair$<$br /$>$ Cunningham is thanked for his help in implementing and cross-checking the$<$br /$>$ code.$<$br /$>$ R Luminescence Package Team \\ - 20 & calc\_OSLLxTxRatio & Calculate Lx/Tx ratio for CW-OSL curves & $<$br /$>$ Calculate Lx/Tx ratios from a given set of CW-OSL curves.$<$br /$>$ & 0.5.1 & 2015-09-13 & 10:44:05 + 20 & calc\_OSLLxTxRatio & Calculate Lx/Tx ratio for CW-OSL curves & $<$br /$>$ Calculate Lx/Tx ratios from a given set of CW-OSL curves.$<$br /$>$ & 0.5.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 21 & calc\_SourceDoseRate & Calculation of the source dose rate via the date of measurement & $<$br /$>$ Calculating the dose rate of the irradiation source via the date of$<$br /$>$ measurement based on: source calibration date, source dose rate, dose rate$<$br /$>$ error. The function returns a data.frame that provides the input argument$<$br /$>$ dose\_rate for the function Second2Gray .$<$br /$>$ & 0.2.0 & 2015-09-13 & 10:44:05 + 21 & calc\_SourceDoseRate & Calculation of the source dose rate via the date of measurement & $<$br /$>$ Calculating the dose rate of the irradiation source via the date of$<$br /$>$ measurement based on: source calibration date, source dose rate, dose rate$<$br /$>$ error. The function returns a data.frame that provides the input argument$<$br /$>$ dose\_rate for the function Second2Gray .$<$br /$>$ & 0.2.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Margret C. Fuchs, HZDR, Helmholtz-Institute Freiberg for Resource Technology (Germany),$<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ R Luminescence Package Team \\ - 22 & calc\_Statistics & Function to calculate statistic measures & $<$br /$>$ This function calculates a number of descriptive statistics for De-data,$<$br /$>$ most fundamentally using error-weighted approaches.$<$br /$>$ & 0.1.3 & 2015-09-13 & 10:44:05 + 22 & calc\_Statistics & Function to calculate statistic measures & $<$br /$>$ This function calculates a number of descriptive statistics for De-data,$<$br /$>$ most fundamentally using error-weighted approaches.$<$br /$>$ & 0.1.3 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany)$<$br /$>$ R Luminescence Package Team \\ - 23 & calc\_TLLxTxRatio & Calculate the Lx/Tx ratio for a given set of TL curves [beta version] & $<$br /$>$ Calculate Lx/Tx ratio for a given set of TL curves.$<$br /$>$ & 0.3.0 & 2015-09-13 & 10:44:05 + 23 & calc\_TLLxTxRatio & Calculate the Lx/Tx ratio for a given set of TL curves [beta version] & $<$br /$>$ Calculate Lx/Tx ratio for a given set of TL curves.$<$br /$>$ & 0.3.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ \#' (France), Christoph Schmidt, University of Bayreuth (Germany)$<$br /$>$ R Luminescence Package Team \\ - 24 & CW2pHMi & Transform a CW-OSL curve into a pHM-OSL curve via interpolation under$<$br /$>$ hyperbolic modulation conditions & $<$br /$>$ This function transforms a conventionally measured continuous-wave (CW)$<$br /$>$ OSL-curve to a pseudo hyperbolic modulated (pHM) curve under hyperbolic$<$br /$>$ modulation conditions using the interpolation procedure described by Bos \&$<$br /$>$ Wallinga (2012).$<$br /$>$ & 0.2.2 & 2015-09-13 & 10:44:05 + 24 & CW2pHMi & Transform a CW-OSL curve into a pHM-OSL curve via interpolation under$<$br /$>$ hyperbolic modulation conditions & $<$br /$>$ This function transforms a conventionally measured continuous-wave (CW)$<$br /$>$ OSL-curve to a pseudo hyperbolic modulated (pHM) curve under hyperbolic$<$br /$>$ modulation conditions using the interpolation procedure described by Bos \&$<$br /$>$ Wallinga (2012).$<$br /$>$ & 0.2.2 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France) Based on comments and suggestions from: Adrie J.J. Bos,$<$br /$>$ Delft University of Technology, The Netherlands $<$br /$>$ R Luminescence Package Team \\ - 25 & CW2pLM & Transform a CW-OSL curve into a pLM-OSL curve & $<$br /$>$ Transforms a conventionally measured continuous-wave (CW) curve into a$<$br /$>$ pseudo linearly modulated (pLM) curve using the equations given in Bulur$<$br /$>$ (2000).$<$br /$>$ & 0.4.1 & 2015-09-13 & 10:44:05 + 25 & CW2pLM & Transform a CW-OSL curve into a pLM-OSL curve & $<$br /$>$ Transforms a conventionally measured continuous-wave (CW) curve into a$<$br /$>$ pseudo linearly modulated (pLM) curve using the equations given in Bulur$<$br /$>$ (2000).$<$br /$>$ & 0.4.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 26 & CW2pLMi & Transform a CW-OSL curve into a pLM-OSL curve via interpolation under linear$<$br /$>$ modulation conditions & $<$br /$>$ Transforms a conventionally measured continuous-wave (CW) OSL-curve into a$<$br /$>$ pseudo linearly modulated (pLM) curve under linear modulation conditions$<$br /$>$ using the interpolation procedure described by Bos \& Wallinga (2012).$<$br /$>$ & 0.3.1 & 2015-09-13 & 10:44:05 + 26 & CW2pLMi & Transform a CW-OSL curve into a pLM-OSL curve via interpolation under linear$<$br /$>$ modulation conditions & $<$br /$>$ Transforms a conventionally measured continuous-wave (CW) OSL-curve into a$<$br /$>$ pseudo linearly modulated (pLM) curve under linear modulation conditions$<$br /$>$ using the interpolation procedure described by Bos \& Wallinga (2012).$<$br /$>$ & 0.3.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux$<$br /$>$ Montaigne Based on comments and suggestions from: Adrie J.J. Bos,$<$br /$>$ Delft University of Technology, The Netherlands $<$br /$>$ R Luminescence Package Team \\ - 27 & CW2pPMi & Transform a CW-OSL curve into a pPM-OSL curve via interpolation under$<$br /$>$ parabolic modulation conditions & $<$br /$>$ Transforms a conventionally measured continuous-wave (CW) OSL-curve into a$<$br /$>$ pseudo parabolic modulated (pPM) curve under parabolic modulation conditions$<$br /$>$ using the interpolation procedure described by Bos \& Wallinga (2012).$<$br /$>$ & 0.2.1 & 2015-09-13 & 10:44:05 + 27 & CW2pPMi & Transform a CW-OSL curve into a pPM-OSL curve via interpolation under$<$br /$>$ parabolic modulation conditions & $<$br /$>$ Transforms a conventionally measured continuous-wave (CW) OSL-curve into a$<$br /$>$ pseudo parabolic modulated (pPM) curve under parabolic modulation conditions$<$br /$>$ using the interpolation procedure described by Bos \& Wallinga (2012).$<$br /$>$ & 0.2.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France) Based on comments and suggestions from: Adrie J.J. Bos,$<$br /$>$ Delft University of Technology, The Netherlands $<$br /$>$ R Luminescence Package Team \\ 28 & ExampleData.BINfileData & Example data from a SAR OSL and SAR TL measurement for the package$<$br /$>$ Luminescence & $<$br /$>$ Example data from a SAR OSL and TL measurement for package Luminescence$<$br /$>$ directly extracted from a Risoe BIN-file and provided in an object of type$<$br /$>$ Risoe.BINfileData-class $<$br /$>$ & & & & \\ 29 & ExampleData.CW\_OSL\_Curve & Example CW-OSL curve data for the package Luminescence & $<$br /$>$ data.frame containing CW-OSL curve data (time, counts)$<$br /$>$ & & & & \\ @@ -68,69 +68,69 @@ 34 & ExampleData.RLum.Analysis & Example data as RLum.Analysis objects & $<$br /$>$ Collection of different RLum.Analysis objects for$<$br /$>$ protocol analysis.$<$br /$>$ & & & & \\ 35 & ExampleData.RLum.Data.Image & Example data as RLum.Data.Image objects & $<$br /$>$ Measurement of Princton Instruments camera imported with the function$<$br /$>$ readSPE2R to R to produce an$<$br /$>$ RLum.Data.Image object.$<$br /$>$ & & & & \\ 36 & ExampleData.XSYG & Example data for a SAR OSL measurement and a TL spectrum using a lexsyg$<$br /$>$ reader & $<$br /$>$ Example data from a SAR OSL measurement and a TL spectrum for package$<$br /$>$ Luminescence imported from a Freiberg Instruments XSYG file using the$<$br /$>$ function readXSYG2R .$<$br /$>$ & & & & \\ - 37 & extract\_IrradiationTimes & Extract irradiation times from an XSYG file & $<$br /$>$ Extracts irradiation times, dose and times since last irradiation, from a$<$br /$>$ Freiberg Instruments XSYG-file. These information can be further used to$<$br /$>$ update an existing BINX-file$<$br /$>$ & 0.2.1 & 2015-09-13 & 10:44:05 + 37 & extract\_IrradiationTimes & Extract irradiation times from an XSYG file & $<$br /$>$ Extracts irradiation times, dose and times since last irradiation, from a$<$br /$>$ Freiberg Instruments XSYG-file. These information can be further used to$<$br /$>$ update an existing BINX-file$<$br /$>$ & 0.2.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 38 & fit\_CWCurve & Nonlinear Least Squares Fit for CW-OSL curves [beta version] & $<$br /$>$ The function determines the weighted least-squares estimates of the$<$br /$>$ component parameters of a CW-OSL signal for a given maximum number of$<$br /$>$ components and returns various component parameters. The fitting procedure$<$br /$>$ uses the nls function with the port algorithm.$<$br /$>$ & 0.5.1 & 2015-09-13 & 10:44:05 + 38 & fit\_CWCurve & Nonlinear Least Squares Fit for CW-OSL curves [beta version] & $<$br /$>$ The function determines the weighted least-squares estimates of the$<$br /$>$ component parameters of a CW-OSL signal for a given maximum number of$<$br /$>$ components and returns various component parameters. The fitting procedure$<$br /$>$ uses the nls function with the port algorithm.$<$br /$>$ & 0.5.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 39 & fit\_LMCurve & Nonlinear Least Squares Fit for LM-OSL curves & $<$br /$>$ The function determines weighted nonlinear least-squares estimates of the$<$br /$>$ component parameters of an LM-OSL curve (Bulur 1996) for a given number of$<$br /$>$ components and returns various component parameters. The fitting procedure$<$br /$>$ uses the function nls with the port algorithm.$<$br /$>$ & 0.2.17 & 2015-09-13 & 10:44:05 + 39 & fit\_LMCurve & Nonlinear Least Squares Fit for LM-OSL curves & $<$br /$>$ The function determines weighted nonlinear least-squares estimates of the$<$br /$>$ component parameters of an LM-OSL curve (Bulur 1996) for a given number of$<$br /$>$ components and returns various component parameters. The fitting procedure$<$br /$>$ uses the function nls with the port algorithm.$<$br /$>$ & 0.2.17 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 40 & get\_Layout & Collection of layout definitions & $<$br /$>$ This helper function returns a list with layout definitions for homogeneous$<$br /$>$ plotting.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 40 & get\_Layout & Collection of layout definitions & $<$br /$>$ This helper function returns a list with layout definitions for homogeneous$<$br /$>$ plotting.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany)$<$br /$>$ R Luminescence Package Team \\ - 41 & get\_Quote & Function to return essential quotes & $<$br /$>$ This function returns one of the collected essential quotes in the$<$br /$>$ growing library. If called without any parameters, a random quote is$<$br /$>$ returned.$<$br /$>$ & 0.1.1 & 2015-09-13 & 10:44:05 + 41 & get\_Quote & Function to return essential quotes & $<$br /$>$ This function returns one of the collected essential quotes in the$<$br /$>$ growing library. If called without any parameters, a random quote is$<$br /$>$ returned.$<$br /$>$ & 0.1.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany)$<$br /$>$ R Luminescence Package Team \\ - 42 & get\_Risoe.BINfileData & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RisoeBINfileData S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 42 & get\_Risoe.BINfileData & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RisoeBINfileData S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 43 & get\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 43 & get\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 44 & length\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 44 & length\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 45 & merge\_Risoe.BINfileData & Merge Risoe.BINfileData objects or Risoe BIN-files & $<$br /$>$ Function allows merging Risoe BIN/BINX files or Risoe.BINfileData objects.$<$br /$>$ & 0.2.3 & 2015-09-13 & 10:44:05 + 45 & merge\_Risoe.BINfileData & Merge Risoe.BINfileData objects or Risoe BIN-files & $<$br /$>$ Function allows merging Risoe BIN/BINX files or Risoe.BINfileData objects.$<$br /$>$ & 0.2.3 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 46 & merge\_RLum.Analysis & Merge function for RLum.Analysis S4 class objects & $<$br /$>$ Function allows merging of RLum.Analysis objects and adding of allowed$<$br /$>$ objects to an RLum.Analysis.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 46 & merge\_RLum.Analysis & Merge function for RLum.Analysis S4 class objects & $<$br /$>$ Function allows merging of RLum.Analysis objects and adding of allowed$<$br /$>$ objects to an RLum.Analysis.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 47 & merge\_RLum.Data.Curve & Merge function for RLum.Data.Curve S4 class objects & $<$br /$>$ Function allows merging of RLum.Data.Curve objects in different ways$<$br /$>$ & 0.1.1 & 2015-09-13 & 10:44:05 + 47 & merge\_RLum.Data.Curve & Merge function for RLum.Data.Curve S4 class objects & $<$br /$>$ Function allows merging of RLum.Data.Curve objects in different ways$<$br /$>$ & 0.1.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 48 & merge\_RLum & General merge function for RLum S4 class objects & $<$br /$>$ Function calls object-specific merge functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 48 & merge\_RLum & General merge function for RLum S4 class objects & $<$br /$>$ Function calls object-specific merge functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ 49 & merge\_RLum.Results & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 50 & plot\_AbanicoPlot & Function to create an Abanico Plot. & $<$br /$>$ A plot is produced which allows comprehensive presentation of data precision$<$br /$>$ and its dispersion around a central value as well as illustration of a$<$br /$>$ kernel density estimate, histogram and/or dot plot of the dose values.$<$br /$>$ & 0.1.2 & 2015-09-13 & 10:44:05 + 50 & plot\_AbanicoPlot & Function to create an Abanico Plot. & $<$br /$>$ A plot is produced which allows comprehensive presentation of data precision$<$br /$>$ and its dispersion around a central value as well as illustration of a$<$br /$>$ kernel density estimate, histogram and/or dot plot of the dose values.$<$br /$>$ & 0.1.2 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,$<$br /$>$ IRAMAT-CRP2A, Universite Bordeaux Montaigne (France) Inspired by a plot$<$br /$>$ introduced by Galbraith \& Green (1990)$<$br /$>$ R Luminescence Package Team \\ - 51 & plot\_DRTResults & Visualise dose recovery test results & $<$br /$>$ The function provides a standardised plot output for dose recovery test$<$br /$>$ measurements.$<$br /$>$ & 0.1.6 & 2015-09-13 & 10:44:05 + 51 & plot\_DRTResults & Visualise dose recovery test results & $<$br /$>$ The function provides a standardised plot output for dose recovery test$<$br /$>$ measurements.$<$br /$>$ & 0.1.6 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Michael Dietze, GFZ Potsdam (Germany)$<$br /$>$ R Luminescence Package Team \\ - 52 & plot\_GrowthCurve & Fit and plot a growth curve for luminescence data (Lx/Tx against dose) & $<$br /$>$ A dose response curve is produced for luminescence measurements using a$<$br /$>$ regenerative protocol.$<$br /$>$ & 1.6.1 & 2015-09-13 & 10:44:05 + 52 & plot\_GrowthCurve & Fit and plot a growth curve for luminescence data (Lx/Tx against dose) & $<$br /$>$ A dose response curve is produced for luminescence measurements using a$<$br /$>$ regenerative protocol.$<$br /$>$ & 1.6.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Michael Dietze, GFZ Potsdam (Germany)$<$br /$>$ R Luminescence Package Team \\ - 53 & plot\_Histogram & Plot a histogram with separate error plot & $<$br /$>$ Function plots a predefined histogram with an accompanying error plot as$<$br /$>$ suggested by Rex Galbraith at the UK LED in Oxford 2010.$<$br /$>$ & 0.4.4 & 2015-09-13 & 10:44:05 + 53 & plot\_Histogram & Plot a histogram with separate error plot & $<$br /$>$ Function plots a predefined histogram with an accompanying error plot as$<$br /$>$ suggested by Rex Galbraith at the UK LED in Oxford 2010.$<$br /$>$ & 0.4.4 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,$<$br /$>$ IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ R Luminescence Package Team \\ - 54 & plot\_KDE & Plot kernel density estimate with statistics & $<$br /$>$ Plot a kernel density estimate of measurement values in combination with the$<$br /$>$ actual values and associated error bars in ascending order. Optionally,$<$br /$>$ statistical measures such as mean, median, standard deviation, standard$<$br /$>$ error and quartile range can be provided visually and numerically.$<$br /$>$ & 3.5 & 2015-09-13 & 10:44:05 + 54 & plot\_KDE & Plot kernel density estimate with statistics & $<$br /$>$ Plot a kernel density estimate of measurement values in combination with the$<$br /$>$ actual values and associated error bars in ascending order. Optionally,$<$br /$>$ statistical measures such as mean, median, standard deviation, standard$<$br /$>$ error and quartile range can be provided visually and numerically.$<$br /$>$ & 3.5 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,$<$br /$>$ IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ R Luminescence Package Team \\ - 55 & plot\_RadialPlot & Function to create a Radial Plot & $<$br /$>$ A Galbraith's radial plot is produced on a logarithmic or a linear scale.$<$br /$>$ & 0.5.3 & 2015-09-13 & 10:44:05 + 55 & plot\_RadialPlot & Function to create a Radial Plot & $<$br /$>$ A Galbraith's radial plot is produced on a logarithmic or a linear scale.$<$br /$>$ & 0.5.3 & 2015-09-21 & 15:05:38 & $<$br /$>$ Michael Dietze, GFZ Potsdam (Germany), Sebastian Kreutzer,$<$br /$>$ IRAMAT-CRP2A, Universite Bordeaux Montaigne (France) Based on a rewritten$<$br /$>$ S script of Rex Galbraith, 2010$<$br /$>$ R Luminescence Package Team \\ - 56 & plot\_Risoe.BINfileData & Plot single luminescence curves from a BIN file object & $<$br /$>$ Plots single luminescence curves from an object returned by the$<$br /$>$ readBIN2R function.$<$br /$>$ & 0.4.1 & 2015-09-13 & 10:44:05 + 56 & plot\_Risoe.BINfileData & Plot single luminescence curves from a BIN file object & $<$br /$>$ Plots single luminescence curves from an object returned by the$<$br /$>$ readBIN2R function.$<$br /$>$ & 0.4.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Michael Dietze, GFZ Potsdam (Germany)$<$br /$>$ R Luminescence Package Team \\ - 57 & plot\_RLum.Analysis & Plot function for an RLum.Analysis S4 class object & $<$br /$>$ The function provides a standardised plot output for curve data of an$<$br /$>$ RLum.Analysis S4 class object$<$br /$>$ & 0.2.6 & 2015-09-13 & 10:44:05 + 57 & plot\_RLum.Analysis & Plot function for an RLum.Analysis S4 class object & $<$br /$>$ The function provides a standardised plot output for curve data of an$<$br /$>$ RLum.Analysis S4 class object$<$br /$>$ & 0.2.6 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 58 & plot\_RLum.Data.Curve & Plot function for an RLum.Data.Curve S4 class object & $<$br /$>$ The function provides a standardised plot output for curve data of an$<$br /$>$ RLum.Data.Curve S4 class object$<$br /$>$ & 0.1.5 & 2015-09-13 & 10:44:05 + 58 & plot\_RLum.Data.Curve & Plot function for an RLum.Data.Curve S4 class object & $<$br /$>$ The function provides a standardised plot output for curve data of an$<$br /$>$ RLum.Data.Curve S4 class object$<$br /$>$ & 0.1.5 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 59 & plot\_RLum.Data.Image & Plot function for an RLum.Data.Image S4 class object & $<$br /$>$ The function provides a standardised plot output for image data of an$<$br /$>$ RLum.Data.Image S4 class object, mainly using the plot functions$<$br /$>$ provided by the raster package.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 59 & plot\_RLum.Data.Image & Plot function for an RLum.Data.Image S4 class object & $<$br /$>$ The function provides a standardised plot output for image data of an$<$br /$>$ RLum.Data.Image S4 class object, mainly using the plot functions$<$br /$>$ provided by the raster package.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 60 & plot\_RLum.Data.Spectrum & Plot function for an RLum.Data.Spectrum S4 class object & $<$br /$>$ The function provides a standardised plot output for spectrum data of an$<$br /$>$ RLum.Data.Spectrum S4 class object$<$br /$>$ & 0.4.0 & 2015-09-13 & 10:44:05 + 60 & plot\_RLum.Data.Spectrum & Plot function for an RLum.Data.Spectrum S4 class object & $<$br /$>$ The function provides a standardised plot output for spectrum data of an$<$br /$>$ RLum.Data.Spectrum S4 class object$<$br /$>$ & 0.4.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 61 & plot\_RLum & General plot function for RLum S4 class objects & $<$br /$>$ Function calls object specific plot functions for RLum S4 class objects.$<$br /$>$ & 0.4.0 & 2015-09-13 & 10:44:05 + 61 & plot\_RLum & General plot function for RLum S4 class objects & $<$br /$>$ Function calls object specific plot functions for RLum S4 class objects.$<$br /$>$ & 0.4.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 62 & plot\_RLum.Results & Plot function for an RLum.Results S4 class object & $<$br /$>$ The function provides a standardised plot output for data of an RLum.Results$<$br /$>$ S4 class object$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 62 & plot\_RLum.Results & Plot function for an RLum.Results S4 class object & $<$br /$>$ The function provides a standardised plot output for data of an RLum.Results$<$br /$>$ S4 class object$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Christoph Burow, University of Cologne (Germany)$<$br /$>$ R Luminescence Package Team \\ - 63 & readBIN2R & Import Risoe BIN-file into R & $<$br /$>$ Import a *.bin or a *.binx file produced by a Risoe DA15 and DA20 TL/OSL$<$br /$>$ reader into R.$<$br /$>$ & 0.9.1 & 2015-09-13 & 10:44:05 + 63 & readBIN2R & Import Risoe BIN-file into R & $<$br /$>$ Import a *.bin or a *.binx file produced by a Risoe DA15 and DA20 TL/OSL$<$br /$>$ reader into R.$<$br /$>$ & 0.9.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Margret C. Fuchs, TU Bergakademie Freiberg (Germany)$<$br /$>$ R Luminescence Package Team \\ - 64 & readSPE2R & Import Princeton Intruments (TM) SPE-file into R & $<$br /$>$ Function imports Princeton Instruments (TM) SPE-files into R environment and$<$br /$>$ provides RLum objects as output.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 64 & readSPE2R & Import Princeton Intruments (TM) SPE-file into R & $<$br /$>$ Function imports Princeton Instruments (TM) SPE-files into R environment and$<$br /$>$ provides RLum objects as output.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 65 & readXSYG2R & Import XSYG files to R & $<$br /$>$ Imports XSYG files produced by a Freiberg Instrument lexsyg reader into R.$<$br /$>$ & 0.4.5 & 2015-09-13 & 10:44:05 + 65 & readXSYG2R & Import XSYG files to R & $<$br /$>$ Imports XSYG files produced by a Freiberg Instrument lexsyg reader into R.$<$br /$>$ & 0.4.5 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ 66 & Risoe.BINfileData-class & Class "Risoe.BINfileData" & $<$br /$>$ S4 class object for luminescence data in R. The object is produced as output$<$br /$>$ of the function readBIN2R .$<$br /$>$ & 0.2.0 & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 67 & Risoe.BINfileData2RLum.Analysis & Convert Risoe.BINfileData object to an RLum.Analysis object & $<$br /$>$ Converts values from one specific position of a Risoe.BINfileData S4-class$<$br /$>$ object to an RLum.Analysis object.$<$br /$>$ & 0.1.2 & 2015-09-13 & 10:44:05 + 67 & Risoe.BINfileData2RLum.Analysis & Convert Risoe.BINfileData object to an RLum.Analysis object & $<$br /$>$ Converts values from one specific position of a Risoe.BINfileData S4-class$<$br /$>$ object to an RLum.Analysis object.$<$br /$>$ & 0.1.2 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ R Luminescence Package Team \\ - 68 & Risoe.BINfileData2RLum.Data.Curve & Convert an element from a Risoe.BINfileData object to an RLum.Data.Curve$<$br /$>$ object & $<$br /$>$ The function converts one specified single record from a Risoe.BINfileData$<$br /$>$ object to an RLum.Data.Curve object.$<$br /$>$ & 0.1.1 & 2015-09-13 & 10:44:05 + 68 & Risoe.BINfileData2RLum.Data.Curve & Convert an element from a Risoe.BINfileData object to an RLum.Data.Curve$<$br /$>$ object & $<$br /$>$ The function converts one specified single record from a Risoe.BINfileData$<$br /$>$ object to an RLum.Data.Curve object.$<$br /$>$ & 0.1.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ R Luminescence Package Team \\ 69 & RLum-class & Class "RLum" & $<$br /$>$ Abstract class for data in the package Luminescence$<$br /$>$ & & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ \\ 70 & RLum.Analysis-class & Class "RLum.Analysis" & $<$br /$>$ Object class containing analysis data for protocol analysis.$<$br /$>$ & & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ \\ @@ -139,16 +139,16 @@ 73 & RLum.Data.Image-class & Class "RLum.Data.Image" & $<$br /$>$ Class for luminescence image data (TL/OSL/RF).$<$br /$>$ & & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ \\ 74 & RLum.Data.Spectrum-class & Class "RLum.Data.Spectrum" & $<$br /$>$ Class for luminescence spectra data (TL/OSL/RF).$<$br /$>$ & & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne (France)$<$br /$>$ \\ 75 & RLum.Results-class & Class "RLum.Results" & $<$br /$>$ Object class contains results data from functions.$<$br /$>$ & & & & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ \\ - 76 & Second2Gray & Converting values from seconds (s) to gray (Gy) & $<$br /$>$ Conversion of absorbed radiation dose in seconds (s) to the SI unit gray$<$br /$>$ (Gy) including error propagation. Normally used for equivalent dose data.$<$br /$>$ & 0.5.0 & 2015-09-13 & 10:44:05 + 76 & Second2Gray & Converting values from seconds (s) to gray (Gy) & $<$br /$>$ Conversion of absorbed radiation dose in seconds (s) to the SI unit gray$<$br /$>$ (Gy) including error propagation. Normally used for equivalent dose data.$<$br /$>$ & 0.5.0 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France), Michael Dietze, GFZ Potsdam (Germany), Margret C. Fuchs, HZDR,$<$br /$>$ Helmholtz-Institute Freiberg for Resource Technology$<$br /$>$ (Germany)$<$br /$>$ R Luminescence Package Team \\ - 77 & set\_Risoe.BINfileData & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RisoeBINfileData S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 77 & set\_Risoe.BINfileData & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RisoeBINfileData S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 78 & set\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific set functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 78 & set\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific set functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ 79 & sTeve & sTeve - sophisticated tool for efficient data validation and evaluation & $<$br /$>$ This function provides a sophisticated routine for comprehensive$<$br /$>$ luminescence dating data analysis.$<$br /$>$ & & & & $<$br /$>$ R Luminescence Team, 2012-2013$<$br /$>$ \\ - 80 & structure\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-13 & 10:44:05 + 80 & structure\_RLum & General accessor function for RLum S4 class objects & $<$br /$>$ Function calls object-specific get functions for RLum S4 class objects.$<$br /$>$ & 0.1 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ - 81 & writeR2BIN & Export Risoe.BINfileData into Risoe BIN-file & $<$br /$>$ Exports a Risoe.BINfileData object in a *.bin or *.binx file that can be$<$br /$>$ opened by the Analyst software or other Risoe software.$<$br /$>$ & 0.3.2 & 2015-09-13 & 10:44:05 + 81 & writeR2BIN & Export Risoe.BINfileData into Risoe BIN-file & $<$br /$>$ Exports a Risoe.BINfileData object in a *.bin or *.binx file that can be$<$br /$>$ opened by the Analyst software or other Risoe software.$<$br /$>$ & 0.3.2 & 2015-09-21 & 15:05:38 & $<$br /$>$ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne$<$br /$>$ (France)$<$br /$>$ R Luminescence Package Team \\ \hline \end{tabular} diff --git a/inst/NEWS.Rd b/inst/NEWS.Rd index f987f5572..27fececaf 100644 --- a/inst/NEWS.Rd +++ b/inst/NEWS.Rd @@ -6,7 +6,7 @@ \item This update is fixing only one specific issue that causes a warning message on the CRAN servers (and on packages that inversely importing this package), - due the way the protoype for the \code{RLum.Data.Image} + due to the way the protoype for the \code{RLum.Data.Image} object was constructed ('rgdal' issue). diff --git a/man/Analyse_SAR.OSLdata.Rd b/man/Analyse_SAR.OSLdata.Rd index ba78e9bac..2fb1b901a 100644 --- a/man/Analyse_SAR.OSLdata.Rd +++ b/man/Analyse_SAR.OSLdata.Rd @@ -108,7 +108,7 @@ consider using the functions \code{\link{analyse_SAR.CWOSL}} or to use the function \link{analyse_SAR.CWOSL} or instead.} } \section{Function version}{ - 0.2.16 (2015-09-13 10:44:05) + 0.2.16 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/CW2pHMi.Rd b/man/CW2pHMi.Rd index eaa2f1415..4a55401df 100644 --- a/man/CW2pHMi.Rd +++ b/man/CW2pHMi.Rd @@ -72,7 +72,7 @@ no further interpolation is attempted.\cr In every case a warning message is shown. } \section{Function version}{ - 0.2.2 (2015-09-13 10:44:05) + 0.2.2 (2015-09-21 15:05:38) } \examples{ ##(1) - simple transformation diff --git a/man/CW2pLM.Rd b/man/CW2pLM.Rd index ec30f1970..2cf6400a1 100644 --- a/man/CW2pLM.Rd +++ b/man/CW2pLM.Rd @@ -38,7 +38,7 @@ The transformation is recommended for curves recorded with a channel resolution of at least 0.05 s/channel. } \section{Function version}{ - 0.4.1 (2015-09-13 10:44:05) + 0.4.1 (2015-09-21 15:05:38) } \examples{ ##read curve from CWOSL.SAR.Data transform curve and plot values diff --git a/man/CW2pLMi.Rd b/man/CW2pLMi.Rd index 697d5d131..3e2f96679 100644 --- a/man/CW2pLMi.Rd +++ b/man/CW2pLMi.Rd @@ -63,7 +63,7 @@ provided manually and more than two points are extrapolated, a warning message is returned. } \section{Function version}{ - 0.3.1 (2015-09-13 10:44:05) + 0.3.1 (2015-09-21 15:05:38) } \examples{ ##(1) diff --git a/man/CW2pPMi.Rd b/man/CW2pPMi.Rd index 1463562b0..b8490572d 100644 --- a/man/CW2pPMi.Rd +++ b/man/CW2pPMi.Rd @@ -70,7 +70,7 @@ should be limited to avoid artificial intensity data. If \code{P} is provided manually, not more than two points are extrapolated. } \section{Function version}{ - 0.2.1 (2015-09-13 10:44:05) + 0.2.1 (2015-09-21 15:05:38) } \examples{ ##(1) diff --git a/man/Luminescence-package.Rd b/man/Luminescence-package.Rd index 7939ef60a..1a693c72c 100644 --- a/man/Luminescence-package.Rd +++ b/man/Luminescence-package.Rd @@ -13,7 +13,7 @@ plotting of equivalent dose distributions. } \details{ \tabular{ll}{ Package: \tab Luminescence\cr Type: \tab Package\cr Version: -\tab 0.4.6\cr Date: \tab 2015-09-13\cr License: \tab GPL-3\cr } +\tab 0.4.6\cr Date: \tab 2015-09-21\cr License: \tab GPL-3\cr } } \author{ \bold{Authors} diff --git a/man/Risoe.BINfileData2RLum.Analysis.Rd b/man/Risoe.BINfileData2RLum.Analysis.Rd index e90e44093..c22feaf2d 100644 --- a/man/Risoe.BINfileData2RLum.Analysis.Rd +++ b/man/Risoe.BINfileData2RLum.Analysis.Rd @@ -50,7 +50,7 @@ The \code{protocol} argument of the \code{\linkS4class{RLum.Analysis}} object is set to 'unknown' if not stated otherwise. } \section{Function version}{ - 0.1.2 (2015-09-13 10:44:05) + 0.1.2 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/Risoe.BINfileData2RLum.Data.Curve.Rd b/man/Risoe.BINfileData2RLum.Data.Curve.Rd index a4dcb509c..d750ddb25 100644 --- a/man/Risoe.BINfileData2RLum.Data.Curve.Rd +++ b/man/Risoe.BINfileData2RLum.Data.Curve.Rd @@ -48,7 +48,7 @@ function \code{\link{Risoe.BINfileData2RLum.Analysis}} should be used for the conversion. } \section{Function version}{ - 0.1.1 (2015-09-13 10:44:05) + 0.1.1 (2015-09-21 15:05:38) } \examples{ ##get package example data diff --git a/man/Second2Gray.Rd b/man/Second2Gray.Rd index 432c1ecad..2965c85e9 100644 --- a/man/Second2Gray.Rd +++ b/man/Second2Gray.Rd @@ -41,7 +41,7 @@ stopped. Furthermore, if a \code{data.frame} is provided for the dose rate value be of the same length as the data frame provided with the argument \code{data} } \section{Function version}{ - 0.5.0 (2015-09-13 10:44:05) + 0.5.0 (2015-09-21 15:05:38) } \examples{ ##(A) for known source dose rate at date of measurement diff --git a/man/analyse_IRSAR.RF.Rd b/man/analyse_IRSAR.RF.Rd index 11afcd8bf..b8cc09e02 100644 --- a/man/analyse_IRSAR.RF.Rd +++ b/man/analyse_IRSAR.RF.Rd @@ -202,7 +202,7 @@ for this function and to allow a part of such tests the re-newed code was made p of the current package.\cr } \section{Function version}{ - 0.4.0 (2015-09-13 10:44:05) + 0.4.0 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/analyse_SAR.CWOSL.Rd b/man/analyse_SAR.CWOSL.Rd index be52a1250..c1110cab6 100644 --- a/man/analyse_SAR.CWOSL.Rd +++ b/man/analyse_SAR.CWOSL.Rd @@ -51,7 +51,7 @@ growth curve (6), (7) and (8) belong to rejection criteria plots. Requires \code{plot = TRUE}.} \item{\dots}{further arguments that will be passed to the function -\code{\link{plot_GrowthCurve}} or \code{\link{calc_OSLLxTxRatio}} +\code{\link{plot_GrowthCurve}} (e.g., \code{fit.method}) or \code{\link{calc_OSLLxTxRatio}} (supported: \code{background.count.distribution} and \code{sigmab})} } \value{ @@ -112,7 +112,7 @@ This function must not be mixed up with the function \bold{The function currently does only support 'OSL' or 'IRSL' data!} } \section{Function version}{ - 0.5.3 (2015-09-13 10:44:05) + 0.5.3 (2015-09-21 15:43:27) } \examples{ ##load data diff --git a/man/analyse_SAR.TL.Rd b/man/analyse_SAR.TL.Rd index edc2125ae..2b62dd603 100644 --- a/man/analyse_SAR.TL.Rd +++ b/man/analyse_SAR.TL.Rd @@ -71,7 +71,7 @@ background see Aitken and Smith (1988)\cr from the input object without further warning. } \section{Function version}{ - 0.1.4 (2015-09-13 10:44:05) + 0.1.4 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/analyse_pIRIRSequence.Rd b/man/analyse_pIRIRSequence.Rd index af0a05224..fca6c329f 100644 --- a/man/analyse_pIRIRSequence.Rd +++ b/man/analyse_pIRIRSequence.Rd @@ -80,7 +80,7 @@ with the following options:\cr \code{pdf(file = "...", height = 15, width = 15)} } \section{Function version}{ - 0.1.4 (2015-09-13 10:44:05) + 0.1.4 (2015-09-21 15:05:38) } \examples{ ### NOTE: For this example existing example data are used. These data are non pIRIR data. diff --git a/man/apply_CosmicRayRemoval.Rd b/man/apply_CosmicRayRemoval.Rd index a8b70b1fd..ee496b137 100644 --- a/man/apply_CosmicRayRemoval.Rd +++ b/man/apply_CosmicRayRemoval.Rd @@ -69,7 +69,7 @@ dataset (see example). - } \section{Function version}{ - 0.1.3 (2015-09-13 10:44:05) + 0.1.3 (2015-09-21 15:05:38) } \examples{ ##(1) - use with your own data and combine (uncomment for usage) diff --git a/man/apply_EfficiencyCorrection.Rd b/man/apply_EfficiencyCorrection.Rd index 5c897b0dd..b7f3484a4 100644 --- a/man/apply_EfficiencyCorrection.Rd +++ b/man/apply_EfficiencyCorrection.Rd @@ -36,7 +36,7 @@ sufficiently correct for spectral efficiency of the entire optical system This function has BETA status. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ##(1) - use with your own data (uncomment for usage) diff --git a/man/calc_AliquotSize.Rd b/man/calc_AliquotSize.Rd index 204b61d93..8e1fb9eb7 100644 --- a/man/calc_AliquotSize.Rd +++ b/man/calc_AliquotSize.Rd @@ -101,7 +101,7 @@ default, \code{10^5} iterations are used, but can be reduced/increased with boxplot together with a statistical summary. } \section{Function version}{ - 0.31 (2015-09-13 10:44:05) + 0.31 (2015-09-21 15:05:38) } \examples{ ## Estimate the amount of grains on a small aliquot diff --git a/man/calc_CentralDose.Rd b/man/calc_CentralDose.Rd index 8a083ddc7..9fdca2930 100644 --- a/man/calc_CentralDose.Rd +++ b/man/calc_CentralDose.Rd @@ -46,7 +46,7 @@ detailed explanation on maximum likelihood estimation can be found in the appendix of Galbraith & Laslett (1993, 468-470) } \section{Function version}{ - 1.3.1 (2015-09-13 10:44:05) + 1.3.1 (2015-09-21 15:05:38) } \examples{ ##load example data diff --git a/man/calc_CommonDose.Rd b/man/calc_CommonDose.Rd index ea2ed30ae..3cb2aeb50 100644 --- a/man/calc_CommonDose.Rd +++ b/man/calc_CommonDose.Rd @@ -49,7 +49,7 @@ calculated using the un-logged estimates of De and their absolute standard error (Galbraith & Roberts 2012, p. 14). } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ## load example data diff --git a/man/calc_CosmicDoseRate.Rd b/man/calc_CosmicDoseRate.Rd index 183f8f08f..7cbba46e7 100644 --- a/man/calc_CosmicDoseRate.Rd +++ b/man/calc_CosmicDoseRate.Rd @@ -159,7 +159,7 @@ for near-surface samples as there is no equation known to the author of this function at the time of writing. } \section{Function version}{ - 0.5.2 (2015-09-13 10:44:05) + 0.5.2 (2015-09-21 15:05:38) } \examples{ ##(1) calculate cosmic dose rate (one absorber) diff --git a/man/calc_FadingCorr.Rd b/man/calc_FadingCorr.Rd index 572bd8309..b3ebfbde0 100644 --- a/man/calc_FadingCorr.Rd +++ b/man/calc_FadingCorr.Rd @@ -90,7 +90,7 @@ appear similar, but they are not comparable! The upper age limit is set to 500 ka! } \section{Function version}{ - 0.3.0 (2015-09-13 10:44:05) + 0.3.0 (2015-09-21 15:05:38) } \examples{ results <- calc_FadingCorr(g_value = c(3.3,0.03), tc = 752, diff --git a/man/calc_FiniteMixture.Rd b/man/calc_FiniteMixture.Rd index 5e99a9799..32305aea6 100644 --- a/man/calc_FiniteMixture.Rd +++ b/man/calc_FiniteMixture.Rd @@ -105,7 +105,7 @@ per cent) calculated by the FFM. The last plot shows the achieved BIC scores and maximum log-likelihood estimates for each iteration of k. } \section{Function version}{ - 0.4 (2015-09-13 10:44:05) + 0.4 (2015-09-21 15:05:38) } \examples{ ## load example data diff --git a/man/calc_FuchsLang2001.Rd b/man/calc_FuchsLang2001.Rd index 1fc6e27ff..c58c64888 100644 --- a/man/calc_FuchsLang2001.Rd +++ b/man/calc_FuchsLang2001.Rd @@ -59,7 +59,7 @@ Please consider the requirements and the constraints of this method (see Fuchs & Lang, 2001) } \section{Function version}{ - 0.4.1 (2015-09-13 10:44:05) + 0.4.1 (2015-09-21 15:05:38) } \examples{ ##load example data diff --git a/man/calc_HomogeneityTest.Rd b/man/calc_HomogeneityTest.Rd index e37aa3db6..c9364674f 100644 --- a/man/calc_HomogeneityTest.Rd +++ b/man/calc_HomogeneityTest.Rd @@ -35,7 +35,7 @@ A simple homogeneity test for De estimates For details see Galbraith (2003). } \section{Function version}{ - 0.2 (2015-09-13 10:44:05) + 0.2 (2015-09-21 15:05:38) } \examples{ ## load example data diff --git a/man/calc_IEU.Rd b/man/calc_IEU.Rd index 46bce84e4..db6704ac8 100644 --- a/man/calc_IEU.Rd +++ b/man/calc_IEU.Rd @@ -49,7 +49,7 @@ This function uses the equations of Thomsen et al. (2007). The parameters a and b are estimated from dose-recovery experiments. } \section{Function version}{ - 0.1.0 (2015-09-13 10:44:05) + 0.1.0 (2015-09-21 15:05:38) } \examples{ ## load data diff --git a/man/calc_MaxDose.Rd b/man/calc_MaxDose.Rd index 21da05fb9..ca4991b38 100644 --- a/man/calc_MaxDose.Rd +++ b/man/calc_MaxDose.Rd @@ -59,7 +59,7 @@ follows\cr\cr 1. subtract the x-offset \cr 2. multiply the natural logs by \bold{Further documentation} \cr\cr Please see \code{\link{calc_MinDose}}. } \section{Function version}{ - 0.3 (2015-09-13 10:44:05) + 0.3 (2015-09-21 15:05:38) } \examples{ ## load example data diff --git a/man/calc_MinDose.Rd b/man/calc_MinDose.Rd index dafb3b0ed..98d1fe011 100644 --- a/man/calc_MinDose.Rd +++ b/man/calc_MinDose.Rd @@ -132,7 +132,7 @@ model with \code{debug=TRUE} which provides extended console output and forwards all internal warning messages. } \section{Function version}{ - 0.4.1 (2015-09-13 10:44:05) + 0.4.1 (2015-09-21 15:05:38) } \examples{ ## Load example data diff --git a/man/calc_OSLLxTxRatio.Rd b/man/calc_OSLLxTxRatio.Rd index 0b7072fc9..ee7f3cc25 100644 --- a/man/calc_OSLLxTxRatio.Rd +++ b/man/calc_OSLLxTxRatio.Rd @@ -74,7 +74,7 @@ The results of this function have been cross-checked with the Analyst \code{\link{get_RLum}}. } \section{Function version}{ - 0.5.1 (2015-09-13 10:44:05) + 0.5.1 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/calc_SourceDoseRate.Rd b/man/calc_SourceDoseRate.Rd index ba5c3d6de..180ce4a47 100644 --- a/man/calc_SourceDoseRate.Rd +++ b/man/calc_SourceDoseRate.Rd @@ -65,7 +65,7 @@ National Laboratory } # } \section{Function version}{ - 0.2.0 (2015-09-13 10:44:05) + 0.2.0 (2015-09-21 15:05:38) } \examples{ ##(1) Simple function usage diff --git a/man/calc_Statistics.Rd b/man/calc_Statistics.Rd index bcb081404..4bafc93b4 100644 --- a/man/calc_Statistics.Rd +++ b/man/calc_Statistics.Rd @@ -27,7 +27,7 @@ This function calculates a number of descriptive statistics for De-data, most fundamentally using error-weighted approaches. } \section{Function version}{ - 0.1.3 (2015-09-13 10:44:05) + 0.1.3 (2015-09-21 15:05:38) } \examples{ ## load example data diff --git a/man/calc_TLLxTxRatio.Rd b/man/calc_TLLxTxRatio.Rd index 4da3636d9..f5d11b52a 100644 --- a/man/calc_TLLxTxRatio.Rd +++ b/man/calc_TLLxTxRatio.Rd @@ -48,7 +48,7 @@ Calculate Lx/Tx ratio for a given set of TL curves. \bold{This function has still BETA status!} } \section{Function version}{ - 0.3.0 (2015-09-13 10:44:05) + 0.3.0 (2015-09-21 15:05:38) } \examples{ ##load package example data diff --git a/man/extract_IrradiationTimes.Rd b/man/extract_IrradiationTimes.Rd index fc954e315..e250ad13f 100644 --- a/man/extract_IrradiationTimes.Rd +++ b/man/extract_IrradiationTimes.Rd @@ -92,7 +92,7 @@ the time stamps this could produce negative values as the important function towards a correct time order. } \section{Function version}{ - 0.2.1 (2015-09-13 10:44:05) + 0.2.1 (2015-09-21 15:05:38) } \examples{ ## (1) - example for your own data diff --git a/man/fit_CWCurve.Rd b/man/fit_CWCurve.Rd index 341fc195d..bc38defcb 100644 --- a/man/fit_CWCurve.Rd +++ b/man/fit_CWCurve.Rd @@ -137,7 +137,7 @@ the fitting procedure has reached a global minimum rather than a local minimum! } \section{Function version}{ - 0.5.1 (2015-09-13 10:44:05) + 0.5.1 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/fit_LMCurve.Rd b/man/fit_LMCurve.Rd index 3a8a428f4..1690cd248 100644 --- a/man/fit_LMCurve.Rd +++ b/man/fit_LMCurve.Rd @@ -177,7 +177,7 @@ global minimum rather than a local minimum! In any case of doubt, the use of manual start values is highly recommended. } \section{Function version}{ - 0.2.17 (2015-09-13 10:44:05) + 0.2.17 (2015-09-21 15:05:38) } \examples{ ##(1) fit LM data without background subtraction diff --git a/man/get_Layout.Rd b/man/get_Layout.Rd index 5bfbbdbe0..c2e01b837 100644 --- a/man/get_Layout.Rd +++ b/man/get_Layout.Rd @@ -28,7 +28,7 @@ create either an empty or a default layout object and fill/modify the definitions (\code{user.layout <- get_Layout(data = "empty")}). } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ## read example data set diff --git a/man/get_Quote.Rd b/man/get_Quote.Rd index 080abc9ed..e61d5b8c0 100644 --- a/man/get_Quote.Rd +++ b/man/get_Quote.Rd @@ -22,7 +22,7 @@ growing library. If called without any parameters, a random quote is returned. } \section{Function version}{ - 0.1.1 (2015-09-13 10:44:05) + 0.1.1 (2015-09-21 15:05:38) } \examples{ ## ask for an arbitrary qoute diff --git a/man/get_RLum.Rd b/man/get_RLum.Rd index 7be191dc4..a0aa8656a 100644 --- a/man/get_RLum.Rd +++ b/man/get_RLum.Rd @@ -34,7 +34,7 @@ corresponding get function will be selected. Allowed arguments can be found in the documentations of the corresponding \code{\linkS4class{RLum}} class. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ##Example based using data and from the calc_CentralDose() function diff --git a/man/get_Risoe.BINfileData.Rd b/man/get_Risoe.BINfileData.Rd index a6c2050ed..d667143e5 100644 --- a/man/get_Risoe.BINfileData.Rd +++ b/man/get_Risoe.BINfileData.Rd @@ -26,7 +26,7 @@ corresponding get function will be selected. Allowed arguments can be found in the documentations of the corresponding \code{\linkS4class{Risoe.BINfileData}} class. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \author{ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne diff --git a/man/length_RLum.Rd b/man/length_RLum.Rd index 9703e16d3..53e7a8af2 100644 --- a/man/length_RLum.Rd +++ b/man/length_RLum.Rd @@ -24,7 +24,7 @@ corresponding get function will be selected. Allowed arguments can be found in the documentations of the corresponding \code{\linkS4class{RLum}} class. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \author{ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne diff --git a/man/merge_RLum.Analysis.Rd b/man/merge_RLum.Analysis.Rd index fc59933df..8e79d6fa9 100644 --- a/man/merge_RLum.Analysis.Rd +++ b/man/merge_RLum.Analysis.Rd @@ -37,7 +37,7 @@ least one object of type \code{\linkS4class{RLum.Analysis}} has to be provided. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ##merge different RLum objects from the example data diff --git a/man/merge_RLum.Data.Curve.Rd b/man/merge_RLum.Data.Curve.Rd index 0b71d1a0d..8817ed829 100644 --- a/man/merge_RLum.Data.Curve.Rd +++ b/man/merge_RLum.Data.Curve.Rd @@ -62,7 +62,7 @@ The information from the slot 'recordType' is taken from the first 'curveType' is filled with the name \code{merged}. } \section{Function version}{ - 0.1.1 (2015-09-13 10:44:05) + 0.1.1 (2015-09-21 15:05:38) } \examples{ ##load example data diff --git a/man/merge_RLum.Rd b/man/merge_RLum.Rd index c8fdadee7..44eb59e45 100644 --- a/man/merge_RLum.Rd +++ b/man/merge_RLum.Rd @@ -34,7 +34,7 @@ found in the documentations of each merge function. So far not for every \code{RLum} object a merging function exists. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ##Example based using data and from the calc_CentralDose() function diff --git a/man/merge_Risoe.BINfileData.Rd b/man/merge_Risoe.BINfileData.Rd index 7e5134afb..c67cb157f 100644 --- a/man/merge_Risoe.BINfileData.Rd +++ b/man/merge_Risoe.BINfileData.Rd @@ -63,7 +63,7 @@ With no additional summand the new position numbers would be: The validity of the output objects is not further checked. } \section{Function version}{ - 0.2.3 (2015-09-13 10:44:05) + 0.2.3 (2015-09-21 15:05:38) } \examples{ ##merge two objects diff --git a/man/plot_AbanicoPlot.Rd b/man/plot_AbanicoPlot.Rd index 98ba67d4d..d566e1d23 100644 --- a/man/plot_AbanicoPlot.Rd +++ b/man/plot_AbanicoPlot.Rd @@ -193,7 +193,7 @@ z-scale to specify where ticks are to be drawn by using the parameter \code{zlim}-definition. } \section{Function version}{ - 0.1.2 (2015-09-13 10:44:05) + 0.1.2 (2015-09-21 15:05:38) } \examples{ ## store original graphics parameters diff --git a/man/plot_DRTResults.Rd b/man/plot_DRTResults.Rd index 708d16b4d..b6f0c00fe 100644 --- a/man/plot_DRTResults.Rd +++ b/man/plot_DRTResults.Rd @@ -89,7 +89,7 @@ Further data and plot arguments can be added by using the appropiate R commands. } \section{Function version}{ - 0.1.6 (2015-09-13 10:44:05) + 0.1.6 (2015-09-21 15:05:38) } \examples{ ## read example data set and misapply them for this plot type diff --git a/man/plot_GrowthCurve.Rd b/man/plot_GrowthCurve.Rd index f59433586..01e30f8e7 100644 --- a/man/plot_GrowthCurve.Rd +++ b/man/plot_GrowthCurve.Rd @@ -117,7 +117,7 @@ provide an empty user mtext \code{mtext = ""}. To plot any other subtitle text, use \code{mtext}. } \section{Function version}{ - 1.6.1 (2015-09-13 10:44:05) + 1.6.1 (2015-09-21 15:05:38) } \examples{ ##(1) plot growth curve for a dummy data.set and show De value diff --git a/man/plot_Histogram.Rd b/man/plot_Histogram.Rd index e64beab7c..fcf373243 100644 --- a/man/plot_Histogram.Rd +++ b/man/plot_Histogram.Rd @@ -80,7 +80,7 @@ error), \code{"seabs.weighted"} (error-weighted absolute standard error), The input data is not restricted to a special type. } \section{Function version}{ - 0.4.4 (2015-09-13 10:44:05) + 0.4.4 (2015-09-21 15:05:38) } \examples{ ## load data diff --git a/man/plot_KDE.Rd b/man/plot_KDE.Rd index 24dbe717b..770301f4f 100644 --- a/man/plot_KDE.Rd +++ b/man/plot_KDE.Rd @@ -103,7 +103,7 @@ The plot output is no 'PD' plot (cf. the discussion of Berger and Galbraith in Ancient TL; see references)! } \section{Function version}{ - 3.5 (2015-09-13 10:44:05) + 3.5 (2015-09-21 15:05:38) } \examples{ ## read example data set diff --git a/man/plot_RLum.Analysis.Rd b/man/plot_RLum.Analysis.Rd index a600f71eb..933552157 100644 --- a/man/plot_RLum.Analysis.Rd +++ b/man/plot_RLum.Analysis.Rd @@ -76,7 +76,7 @@ Only plotting of \code{RLum.Data.Curve} and \code{RLum.Data.Spectrum} objects are currently supported. } \section{Function version}{ - 0.2.6 (2015-09-13 10:44:05) + 0.2.6 (2015-09-21 15:05:38) } \examples{ ###load data diff --git a/man/plot_RLum.Data.Curve.Rd b/man/plot_RLum.Data.Curve.Rd index db4579919..ab5924c4c 100644 --- a/man/plot_RLum.Data.Curve.Rd +++ b/man/plot_RLum.Data.Curve.Rd @@ -35,7 +35,7 @@ according to \code{\link{plot}}. Not all arguments of \code{\link{plot}} will be passed! } \section{Function version}{ - 0.1.5 (2015-09-13 10:44:05) + 0.1.5 (2015-09-21 15:05:38) } \examples{ ##plot curve data diff --git a/man/plot_RLum.Data.Image.Rd b/man/plot_RLum.Data.Image.Rd index cdc298b23..696c68853 100644 --- a/man/plot_RLum.Data.Image.Rd +++ b/man/plot_RLum.Data.Image.Rd @@ -76,7 +76,7 @@ function is not optimized to handle image data > ca. 200 MByte and thus plotting of such data is extremely slow. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/plot_RLum.Data.Spectrum.Rd b/man/plot_RLum.Data.Spectrum.Rd index a7786ac9e..0c01ef327 100644 --- a/man/plot_RLum.Data.Spectrum.Rd +++ b/man/plot_RLum.Data.Spectrum.Rd @@ -148,7 +148,7 @@ summed up. To select a transect use the \code{xlim} argument, e.g. Not all additional arguments (\code{...}) will be passed similarly! } \section{Function version}{ - 0.4.0 (2015-09-13 10:44:05) + 0.4.0 (2015-09-21 15:05:38) } \examples{ ##load example data diff --git a/man/plot_RLum.Rd b/man/plot_RLum.Rd index 3ae2de1b9..21f40d617 100644 --- a/man/plot_RLum.Rd +++ b/man/plot_RLum.Rd @@ -42,7 +42,7 @@ found in the documentations of each plot function. \tabular{lll}{ The provided plot output depends on the input object. } \section{Function version}{ - 0.4.0 (2015-09-13 10:44:05) + 0.4.0 (2015-09-21 15:05:38) } \examples{ #load Example data diff --git a/man/plot_RLum.Results.Rd b/man/plot_RLum.Results.Rd index 21a4b2d13..101bc5def 100644 --- a/man/plot_RLum.Results.Rd +++ b/man/plot_RLum.Results.Rd @@ -33,7 +33,7 @@ Not all arguments available for \code{\link{plot}} will be passed! Only plotting of \code{RLum.Results} objects are supported. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ###load data diff --git a/man/plot_RadialPlot.Rd b/man/plot_RadialPlot.Rd index 6c8069f36..f933619e7 100644 --- a/man/plot_RadialPlot.Rd +++ b/man/plot_RadialPlot.Rd @@ -131,7 +131,7 @@ error), \code{"seabs.weighted"} (error-weighted absolute standard error), \code{"kurtosis"} (kurtosis) and \code{"skewness"} (skewness). } \section{Function version}{ - 0.5.3 (2015-09-13 10:44:05) + 0.5.3 (2015-09-21 15:05:38) } \examples{ ## load example data diff --git a/man/plot_Risoe.BINfileData.Rd b/man/plot_Risoe.BINfileData.Rd index a6fc7a67f..78df27f2b 100644 --- a/man/plot_Risoe.BINfileData.Rd +++ b/man/plot_Risoe.BINfileData.Rd @@ -79,7 +79,7 @@ The function has been successfully tested for the Sequence Editor file output version 3 and 4. } \section{Function version}{ - 0.4.1 (2015-09-13 10:44:05) + 0.4.1 (2015-09-21 15:05:38) } \examples{ ##load data diff --git a/man/readBIN2R.Rd b/man/readBIN2R.Rd index df7e7f623..385e5e141 100644 --- a/man/readBIN2R.Rd +++ b/man/readBIN2R.Rd @@ -62,7 +62,7 @@ other BIN/BINX-format versions are currently not supported. The implementation of version 07 support could not been tested so far.}. } \section{Function version}{ - 0.9.1 (2015-09-13 10:44:05) + 0.9.1 (2015-09-21 15:05:38) } \examples{ ##(1) import Risoe BIN-file to R (uncomment for usage) diff --git a/man/readSPE2R.Rd b/man/readSPE2R.Rd index 229475f41..c68b878d2 100644 --- a/man/readSPE2R.Rd +++ b/man/readSPE2R.Rd @@ -67,7 +67,7 @@ The function has been successfully tested for SPE format versions 2.x. supported.} } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \examples{ ## to run examples uncomment lines and run the code diff --git a/man/readXSYG2R.Rd b/man/readXSYG2R.Rd index b1e27c5d7..91128167e 100644 --- a/man/readXSYG2R.Rd +++ b/man/readXSYG2R.Rd @@ -97,7 +97,7 @@ be done using the functions provided with the package \code{\link{xml}}.\cr the XSXG file are skipped. } \section{Function version}{ - 0.4.5 (2015-09-13 10:44:05) + 0.4.5 (2015-09-21 15:05:38) } \examples{ ##(1) import XSYG file to R (uncomment for usage) diff --git a/man/set_RLum.Rd b/man/set_RLum.Rd index bbe69048b..4b724dc02 100644 --- a/man/set_RLum.Rd +++ b/man/set_RLum.Rd @@ -31,7 +31,7 @@ corresponding set function will be selected. Allowed arguments can be found in the documentations of the corresponding \code{\linkS4class{RLum}} class. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \author{ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne diff --git a/man/set_Risoe.BINfileData.Rd b/man/set_Risoe.BINfileData.Rd index 69707e437..de93fd997 100644 --- a/man/set_Risoe.BINfileData.Rd +++ b/man/set_Risoe.BINfileData.Rd @@ -26,7 +26,7 @@ corresponding get function will be selected. Allowed arguments can be found in the documentations of the corresponding \code{\linkS4class{Risoe.BINfileData}} class. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \author{ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne diff --git a/man/structure_RLum.Rd b/man/structure_RLum.Rd index 483ad1bb7..cbed6027a 100644 --- a/man/structure_RLum.Rd +++ b/man/structure_RLum.Rd @@ -24,7 +24,7 @@ corresponding get function will be selected. Allowed arguments can be found in the documentations of the corresponding \code{\linkS4class{RLum}} class. } \section{Function version}{ - 0.1 (2015-09-13 10:44:05) + 0.1 (2015-09-21 15:05:38) } \author{ Sebastian Kreutzer, IRAMAT-CRP2A, Universite Bordeaux Montaigne diff --git a/man/writeR2BIN.Rd b/man/writeR2BIN.Rd index d71ad4927..976e25499 100644 --- a/man/writeR2BIN.Rd +++ b/man/writeR2BIN.Rd @@ -59,7 +59,7 @@ directly produced by the Risoe readers!\cr Implementation of support for version 07 could so far not properly tested. } \section{Function version}{ - 0.3.2 (2015-09-13 10:44:05) + 0.3.2 (2015-09-21 15:05:38) } \examples{ ##uncomment for usage