test_signal_fillempty.py

# Copyright (c) MONAI Consortium
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#     http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

from __future__ import annotations

import os
import unittest

import numpy as np
import torch

from monai.transforms import SignalFillEmpty
from monai.utils.type_conversion import convert_to_tensor
from tests.utils import SkipIfBeforePyTorchVersion

TEST_SIGNAL = os.path.join(os.path.dirname(__file__), "testing_data", "signal.npy")


@SkipIfBeforePyTorchVersion((1, 9))
class TestSignalFillEmptyNumpy(unittest.TestCase):

    def test_correct_parameters_multi_channels(self):
        self.assertIsInstance(SignalFillEmpty(replacement=0.0), SignalFillEmpty)
        sig = np.load(TEST_SIGNAL)
        sig[:, 123] = np.nan
        fillempty = SignalFillEmpty(replacement=0.0)
        fillemptysignal = fillempty(sig)
        self.assertTrue(not np.isnan(fillemptysignal).any())


@SkipIfBeforePyTorchVersion((1, 9))
class TestSignalFillEmptyTorch(unittest.TestCase):

    def test_correct_parameters_multi_channels(self):
        self.assertIsInstance(SignalFillEmpty(replacement=0.0), SignalFillEmpty)
        sig = convert_to_tensor(np.load(TEST_SIGNAL))
        sig[:, 123] = convert_to_tensor(np.nan)
        fillempty = SignalFillEmpty(replacement=0.0)
        fillemptysignal = fillempty(sig)
        self.assertTrue(not torch.isnan(fillemptysignal).any())


if __name__ == "__main__":
    unittest.main()