grateful-Rmarkdown.Rmd

---
title: "Using {grateful} with Rmarkdown"
output: pdf_document
bibliography: grateful-refs.bib
# csl: https://www.zotero.org/styles/journal-of-ecology
---

Load packages

```{r message=FALSE}
library(dplyr)
library(ggplot2)
library(visreg)
```

Run some analysis

```{r}
iris |> 
  group_by(Species) |> 
  summarise(mean(Petal.Length))

ggplot(iris) +
  geom_jitter(aes(Species, Petal.Length, colour = Species))

model <- lm(Petal.Length ~ Species, data = iris)
visreg(model)
```

### Software used

**Paragraph output:**

```{r echo=FALSE}
grateful::cite_packages(output = "paragraph", pkgs = "Session", out.dir = ".")
```


**Table output:**

```{r}
#| echo: false
pkgs <- grateful::cite_packages(output = "table", pkgs = "Session", out.dir = ".")
knitr::kable(pkgs)
```



## References