Merge pull request #38 from jnalanko/master

Merge pull request #35 from PROBIC/remove-remaining-mpi-code

Merge pull request #35 from PROBIC/remove-remaining-mpi-code

Remove remaining MPI code.

Merge pull request #34 from PROBIC/add-gpu-support

Support building with GPU acceleration.

Fix indent.

Merge pull request #33 from PROBIC/bump-actions-download-artifact

Bump actions/download-artifact from 2 to 4.1.7

Merge pull request #32 from Piketulus/master

Merge pull request #31 from PROBIC/refactor-input-reading

Merge pull request #31 from PROBIC/refactor-input-reading

Fix compiling without openmp.

Fix compiling without openmp.

Update mGEMS (can now compile whole project without telescope).

Update mGEMS (can now compile whole project without telescope).

Add function to accesse specific ec's read IDs.

Ensure index doesn't get cast to <64bit int.

Ensure index doesn't get cast to <64bit int.

Count reads in min-hits like intended.

Faster computing of group_counts (no need to save memory here).

Slight improvement to final merge parallelism in collapse()

Ensure deterministic order for ECs.

Better status messages with --verbose.

Simplify the hashing.

Move the values in merging instead of copying.

Refactoring in creating the likelihood matrix.

Merge tag 'v2.1.1' into refactor-input-reading

Merge pull request #30 from PROBIC/parallelism-fixes