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DESCRIPTION
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DESCRIPTION
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Package: RDML
Type: Package
Title: Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files
Version: 1.3
LazyData: true
Date: 2024-07-31
Description: Imports real-time thermo cycler (qPCR) data from Real-time PCR
Data Markup Language (RDML) and transforms to the appropriate formats of
the 'qpcR' and 'chipPCR' packages. Contains a dendrogram visualization
for the structure of RDML object and GUI for RDML editing.
Authors@R: c(
person("Konstantin A.", "Blagodatskikh",
email = "k.blag@yandex.ru", role = c("cre", "aut")),
person("Stefan", "Roediger",
email = "stefan.roediger@b-tu.de",
role = "aut"),
person("Michal", "Burdukiewicz",
email = "michalburdukiewicz@gmail.com",
comment = c(ORCID = "0000-0001-8926-582X"),
role = "aut"),
person("Andrej-Nikolai", "Spiess",
email = "a.spiess@uke.de", role = "aut"))
License: MIT + file LICENSE
URL: https://github.com/PCRuniversum/RDML
Depends:
R (>= 3.2.0)
Imports:
checkmate (>= 1.6.2),
data.table,
pipeR,
readxl,
rlist (>= 0.4),
R6 (>= 2.0.1),
stringr,
tools (>= 3.2),
xml2 (>= 1.0),
lubridate (>= 1.6.0)
Collate:
'RDML.types.R'
'RDML.R'
'RDML.AsDendrogram.R'
'RDML.AsTable.R'
'RDML.GetFData.R'
'RDML.Merge.R'
'RDML.SetFData.R'
'RDML.init.R'
'functional_wrappers.R'
'rdmlEdit.R'
Suggests:
chipPCR,
magrittr,
reshape2,
qpcR,
dplyr,
ggplot2,
knitr,
kfigr,
MBmca,
shiny,
shinyjs,
shinythemes,
shinyMolBio,
V8,
testthat
RoxygenNote: 7.3.1