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setup_workflow.py
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#!/usr/bin/env python
'''
PROGRAM:
Create the ROCOTO workflow given the configuration of the GFS parallel
AUTHOR:
Rahul.Mahajan
rahul.mahajan@noaa.gov
FILE DEPENDENCIES:
1. config files for the parallel; e.g. config.base, config.fcst[.gfs], etc.
Without these dependencies, the script will fail
OUTPUT:
1. PSLOT.xml: XML workflow
2. PSLOT.crontab: crontab for ROCOTO run command
'''
import os
import sys
import re
import numpy as np
from datetime import datetime, timedelta
from argparse import ArgumentParser, ArgumentDefaultsHelpFormatter
from collections import OrderedDict
import rocoto
import workflow_utils as wfu
def main():
parser = ArgumentParser(description='Setup XML workflow and CRONTAB for a GFS parallel.', formatter_class=ArgumentDefaultsHelpFormatter)
parser.add_argument('--expdir', help='full path to experiment directory containing config files', type=str, required=False, default=os.environ['PWD'])
args = parser.parse_args()
configs = wfu.get_configs(args.expdir)
_base = wfu.config_parser([wfu.find_config('config.base', configs)])
if not os.path.samefile(args.expdir, _base['EXPDIR']):
print('MISMATCH in experiment directories!')
print(f'config.base: EXPDIR = {repr(_base["EXPDIR"])}')
print(f'input arg: --expdir = {repr(args.expdir)}')
sys.exit(1)
gfs_steps = ['prep', 'anal', 'analdiag', 'analcalc', 'gldas', 'fcst', 'postsnd', 'post', 'vrfy', 'arch']
gfs_steps_gempak = ['gempak']
gfs_steps_awips = ['awips']
gfs_steps_wafs = ['wafs', 'wafsgrib2', 'wafsblending', 'wafsgcip', 'wafsgrib20p25', 'wafsblending0p25']
#hyb_steps = ['eobs', 'eomg', 'eupd', 'ecen', 'efcs', 'epos', 'earc']
metp_steps = ['metp']
wav_steps = ['waveinit', 'waveprep', 'wavepostsbs', 'wavepostbndpnt', 'wavepostbndpntbll', 'wavepostpnt']
#Implement additional wave jobs at later date
wav_steps_gempak = ['wavegempak']
wav_steps_awips = ['waveawipsbulls', 'waveawipsgridded']
# From gfsv16b latest
# gfs_steps = ['prep', 'anal', 'gldas', 'fcst', 'postsnd', 'post', 'awips', 'gempak', 'vrfy', 'metp', 'arch']
hyb_steps = ['eobs', 'ediag', 'eomg', 'eupd', 'ecen', 'esfc', 'efcs', 'echgres', 'epos', 'earc']
steps = gfs_steps + hyb_steps if _base.get('DOHYBVAR', 'NO') == 'YES' else gfs_steps
steps = steps + metp_steps if _base.get('DO_METP', 'NO') == 'YES' else steps
steps = steps + gfs_steps_gempak if _base.get('DO_GEMPAK', 'NO') == 'YES' else steps
steps = steps + gfs_steps_awips if _base.get('DO_AWIPS', 'NO') == 'YES' else steps
steps = steps + gfs_steps_wafs if _base.get('WAFSF', 'NO') == 'YES' else steps
steps = steps + wav_steps if _base.get('DO_WAVE', 'NO') == 'YES' else steps
steps = steps + wav_steps_gempak if _base.get('DO_GEMPAK', 'NO') == 'YES' else steps
steps = steps + wav_steps_awips if _base.get('DO_AWIPS', 'NO') == 'YES' else steps
dict_configs = wfu.source_configs(configs, steps)
# Check and set gfs_cyc specific variables
if dict_configs['base']['gfs_cyc'] != 0:
dict_configs['base'] = get_gfs_cyc_dates(dict_configs['base'])
# npe_node_max is the same for all tasks, so just use the one from fcst
dict_configs['base']['npe_node_max'] = dict_configs['fcst']['npe_node_max']
# First create workflow XML
create_xml(dict_configs)
# Next create the crontab
wfu.create_crontab(dict_configs['base'])
return
def get_gfs_cyc_dates(base):
'''
Generate GFS dates from experiment dates and gfs_cyc choice
'''
base_out = base.copy()
gfs_cyc = base['gfs_cyc']
sdate = base['SDATE']
edate = base['EDATE']
interval_gfs = wfu.get_gfs_interval(gfs_cyc)
# Set GFS cycling dates
hrdet = 0
if gfs_cyc == 1:
hrinc = 24 - sdate.hour
hrdet = edate.hour
elif gfs_cyc == 2:
if sdate.hour in [0, 12]:
hrinc = 12
elif sdate.hour in [6, 18]:
hrinc = 6
if edate.hour in [6, 18]:
hrdet = 6
elif gfs_cyc == 4:
hrinc = 6
sdate_gfs = sdate + timedelta(hours=hrinc)
edate_gfs = edate - timedelta(hours=hrdet)
if sdate_gfs > edate:
print('W A R N I N G!')
print('Starting date for GFS cycles is after Ending date of experiment')
print(f'SDATE = {sdate.strftime("%Y%m%d%H")}, EDATE = {edate.strftime("%Y%m%d%H")}')
print(f'SDATE_GFS = {sdate_gfs.strftime("%Y%m%d%H")}, EDATE_GFS = {edate_gfs.strftime("%Y%m%d%H")}')
gfs_cyc = 0
base_out['gfs_cyc'] = gfs_cyc
base_out['SDATE_GFS'] = sdate_gfs
base_out['EDATE_GFS'] = edate_gfs
base_out['INTERVAL_GFS'] = interval_gfs
fhmax_gfs = {}
for hh in ['00', '06', '12', '18']:
fhmax_gfs[hh] = base.get(f'FHMAX_GFS_{hh}', 'FHMAX_GFS_00')
base_out['FHMAX_GFS'] = fhmax_gfs
return base_out
def get_preamble():
'''
Generate preamble for XML
'''
strings = []
strings.append('<?xml version="1.0"?>\n')
strings.append('<!DOCTYPE workflow\n')
strings.append('[\n')
strings.append('\t<!--\n')
strings.append('\tPROGRAM\n')
strings.append('\t\tMain workflow manager for cycling Global Forecast System\n')
strings.append('\n')
strings.append('\tAUTHOR:\n')
strings.append('\t\tRahul Mahajan\n')
strings.append('\t\trahul.mahajan@noaa.gov\n')
strings.append('\n')
strings.append('\tNOTES:\n')
strings.append(f'\t\tThis workflow was automatically generated at {datetime.now()}\n')
strings.append('\t-->\n')
return ''.join(strings)
def get_definitions(base):
'''
Create entities related to the experiment
'''
machine = base.get('machine', wfu.detectMachine())
scheduler = wfu.get_scheduler(machine)
nodesize = base.get('npe_node_max', '1')
hpssarch = base.get('HPSSARCH', 'NO').upper()
strings = []
strings.append('\n')
strings.append('\t<!-- Experiment parameters such as name, starting, ending dates -->\n')
strings.append(f'''\t<!ENTITY PSLOT "{base['PSLOT']}">\n''')
strings.append(f'''\t<!ENTITY SDATE "{base['SDATE'].strftime('%Y%m%d%H%M')}">\n''')
strings.append(f'''\t<!ENTITY EDATE "{base['EDATE'].strftime('%Y%m%d%H%M')}">\n''')
if base['gfs_cyc'] != 0:
strings.append(get_gfs_dates(base))
strings.append('\n')
strings.append('\t<!-- Run Envrionment -->\n')
strings.append(f'''\t<!ENTITY RUN_ENVIR "{base['RUN_ENVIR']}">\n''')
strings.append('\n')
strings.append('\t<!-- Experiment and Rotation directory -->\n')
strings.append(f'''\t<!ENTITY EXPDIR "{base['EXPDIR']}">\n''')
strings.append(f'''\t<!ENTITY ROTDIR "{base['ROTDIR']}">\n''')
strings.append('\n')
strings.append('\t<!-- Directories for driving the workflow -->\n')
strings.append(f'''\t<!ENTITY HOMEgfs "{base['HOMEgfs']}">\n''')
strings.append(f'''\t<!ENTITY JOBS_DIR "{base['BASE_JOB']}">\n''')
strings.append(f'''\t<!ENTITY DMPDIR "{base['DMPDIR']}">\n''')
strings.append('\n')
strings.append('\t<!-- Machine related entities -->\n')
strings.append(f'''\t<!ENTITY ACCOUNT "{base['ACCOUNT']}">\n''')
strings.append(f'''\t<!ENTITY QUEUE "{base['QUEUE']}">\n''')
strings.append(f'''\t<!ENTITY QUEUE_SERVICE "{base['QUEUE_SERVICE']}">\n''')
if scheduler in ['slurm'] and machine in ['ORION']:
strings.append(f'''\t<!ENTITY PARTITION_BATCH "{base['PARTITION_BATCH']}">\n''')
if scheduler in ['slurm']:
strings.append(f'''\t<!ENTITY PARTITION_SERVICE "{base['QUEUE_SERVICE']}">\n''')
strings.append(f'\t<!ENTITY SCHEDULER "{scheduler}">\n')
strings.append(f'\t<!ENTITY NODESIZE "{nodesize}">\n')
strings.append('\n')
strings.append('\t<!-- Toggle HPSS archiving -->\n')
strings.append(f'''\t<!ENTITY ARCHIVE_TO_HPSS "{base['HPSSARCH']}">\n''')
strings.append('\n')
strings.append('\t<!-- ROCOTO parameters that control workflow -->\n')
strings.append('\t<!ENTITY CYCLETHROTTLE "3">\n')
strings.append('\t<!ENTITY TASKTHROTTLE "25">\n')
strings.append('\t<!ENTITY MAXTRIES "2">\n')
strings.append('\n')
return ''.join(strings)
def get_gfs_dates(base):
'''
Generate GFS dates entities
'''
strings = []
strings.append('\n')
strings.append('\t<!-- Starting and ending dates for GFS cycle -->\n')
strings.append(f'''\t<!ENTITY SDATE_GFS "{base['SDATE_GFS'].strftime('%Y%m%d%H%M')}">\n''')
strings.append(f'''\t<!ENTITY EDATE_GFS "{base['EDATE_GFS'].strftime('%Y%m%d%H%M')}">\n''')
strings.append(f'''\t<!ENTITY INTERVAL_GFS "{base['INTERVAL_GFS']}">\n''')
return ''.join(strings)
def get_gdasgfs_resources(dict_configs, cdump='gdas'):
'''
Create GDAS or GFS resource entities
'''
base = dict_configs['base']
machine = base.get('machine', wfu.detectMachine())
scheduler = wfu.get_scheduler(machine)
do_bufrsnd = base.get('DO_BUFRSND', 'NO').upper()
do_gempak = base.get('DO_GEMPAK', 'NO').upper()
do_awips = base.get('DO_AWIPS', 'NO').upper()
do_wafs = base.get('WAFSF', 'NO').upper()
do_metp = base.get('DO_METP', 'NO').upper()
do_gldas = base.get('DO_GLDAS', 'NO').upper()
do_wave = base.get('DO_WAVE', 'NO').upper()
do_wave_cdump = base.get('WAVE_CDUMP', 'BOTH').upper()
reservation = base.get('RESERVATION', 'NONE').upper()
#tasks = ['prep', 'anal', 'fcst', 'post', 'vrfy', 'arch']
tasks = ['prep', 'anal', 'analcalc']
if cdump in ['gdas']:
tasks += ['analdiag']
if cdump in ['gdas'] and do_gldas in ['Y', 'YES']:
tasks += ['gldas']
if cdump in ['gdas'] and do_wave in ['Y', 'YES'] and do_wave_cdump in ['GDAS', 'BOTH']:
#tasks += ['waveinit', 'waveprep', 'wavepostsbs', 'wavepostbndpnt', 'wavepostpnt', 'wavestat']
tasks += ['waveinit', 'waveprep', 'wavepostsbs', 'wavepostbndpnt', 'wavepostbndpntbll', 'wavepostpnt']
tasks += ['fcst', 'post', 'vrfy', 'arch']
if cdump in ['gfs'] and do_wave in ['Y', 'YES'] and do_wave_cdump in ['GFS', 'BOTH']:
#tasks += ['waveinit', 'waveprep', 'wavepostsbs', 'wavepostbndpnt', 'wavepostpnt', 'wavestat']
tasks += ['waveinit', 'waveprep', 'wavepostsbs', 'wavepostbndpnt', 'wavepostbndpntbll', 'wavepostpnt']
if cdump in ['gfs'] and do_bufrsnd in ['Y', 'YES']:
tasks += ['postsnd']
if do_gempak in ['Y', 'YES']:
tasks += ['gempak']
if cdump in ['gfs'] and do_wave in ['Y', 'YES'] and do_gempak in ['Y', 'YES']:
tasks += ['wavegempak']
if cdump in ['gfs'] and do_awips in ['Y', 'YES']:
tasks += ['awips']
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
tasks += ['wafs', 'wafsgrib2', 'wafsblending', 'wafsgcip', 'wafsgrib20p25', 'wafsblending0p25']
if cdump in ['gfs'] and do_metp in ['Y', 'YES']:
tasks += ['metp']
if cdump in ['gfs'] and do_wave in ['Y', 'YES'] and do_awips in ['Y', 'YES']:
tasks += ['waveawipsbulls', 'waveawipsgridded']
dict_resources = OrderedDict()
for task in tasks:
cfg = dict_configs[task]
wtimestr, resstr, queuestr, memstr, natstr = wfu.get_resources(machine, cfg, task, reservation, cdump=cdump)
taskstr = f'{task.upper()}_{cdump.upper()}'
strings = []
strings.append(f'\t<!ENTITY QUEUE_{taskstr} "{queuestr}">\n')
if scheduler in ['slurm'] and machine in ['ORION'] and task not in ['arch']:
strings.append(f'\t<!ENTITY PARTITION_{taskstr} "&PARTITION_BATCH;">\n')
if scheduler in ['slurm'] and task in ['arch']:
strings.append(f'\t<!ENTITY PARTITION_{taskstr} "&PARTITION_SERVICE;">\n')
strings.append(f'\t<!ENTITY WALLTIME_{taskstr} "{wtimestr}">\n')
strings.append(f'\t<!ENTITY RESOURCES_{taskstr} "{resstr}">\n')
if len(memstr) != 0:
strings.append(f'\t<!ENTITY MEMORY_{taskstr} "{memstr}">\n')
strings.append(f'\t<!ENTITY NATIVE_{taskstr} "{natstr}">\n')
dict_resources[f'{cdump}{task}'] = ''.join(strings)
return dict_resources
def get_hyb_resources(dict_configs):
'''
Create hybrid resource entities
'''
base = dict_configs['base']
machine = base.get('machine', wfu.detectMachine())
scheduler = wfu.get_scheduler(machine)
lobsdiag_forenkf = base.get('lobsdiag_forenkf', '.false.').upper()
eupd_cyc= base.get('EUPD_CYC', 'gdas').upper()
reservation = base.get('RESERVATION', 'NONE').upper()
dict_resources = OrderedDict()
# These tasks can be run in either or both cycles
if lobsdiag_forenkf in ['.T.', '.TRUE.']:
tasks1 = ['eobs', 'ediag', 'eupd', 'echgres']
else:
tasks1 = ['eobs', 'eomg', 'eupd', 'echgres']
if eupd_cyc in ['BOTH']:
cdumps = ['gfs', 'gdas']
elif eupd_cyc in ['GFS']:
cdumps = ['gfs']
elif eupd_cyc in ['GDAS']:
cdumps = ['gdas']
for cdump in cdumps:
for task in tasks1:
cfg = dict_configs['eobs'] if task in ['eomg'] else dict_configs[task]
wtimestr, resstr, queuestr, memstr, natstr = wfu.get_resources(machine, cfg, task, reservation, cdump=cdump)
taskstr = f'{task.upper()}_{cdump.upper()}'
strings = []
strings.append(f'\t<!ENTITY QUEUE_{taskstr} "{queuestr}">\n')
strings.append(f'\t<!ENTITY WALLTIME_{taskstr} "{wtimestr}">\n')
strings.append(f'\t<!ENTITY RESOURCES_{taskstr} "{resstr}">\n')
if len(memstr) != 0:
strings.append(f'\t<!ENTITY MEMORY_{taskstr} "{memstr}">\n')
strings.append(f'\t<!ENTITY NATIVE_{taskstr} "{natstr}">\n')
dict_resources[f'{cdump}{task}'] = ''.join(strings)
# These tasks are always run as part of the GDAS cycle
cdump = 'gdas'
tasks2 = ['ecen', 'esfc', 'efcs', 'epos', 'earc']
for task in tasks2:
cfg = dict_configs[task]
wtimestr, resstr, queuestr, memstr, natstr = wfu.get_resources(machine, cfg, task, reservation, cdump=cdump)
taskstr = f'{task.upper()}_{cdump.upper()}'
strings = []
strings.append(f'\t<!ENTITY QUEUE_{taskstr} "{queuestr}">\n')
if scheduler in ['slurm'] and machine in ['ORION'] and task not in ['earc']:
strings.append(f'\t<!ENTITY PARTITION_{taskstr} "&PARTITION_BATCH;">\n')
if scheduler in ['slurm'] and task in ['earc']:
strings.append(f'\t<!ENTITY PARTITION_{taskstr} "&PARTITION_SERVICE;">\n')
strings.append(f'\t<!ENTITY WALLTIME_{taskstr} "{wtimestr}">\n')
strings.append(f'\t<!ENTITY RESOURCES_{taskstr} "{resstr}">\n')
if len(memstr) != 0:
strings.append(f'\t<!ENTITY MEMORY_{taskstr} "{memstr}">\n')
strings.append(f'\t<!ENTITY NATIVE_{taskstr} "{natstr}">\n')
dict_resources[f'{cdump}{task}'] = ''.join(strings)
return dict_resources
def get_gdasgfs_tasks(dict_configs, cdump='gdas'):
'''
Create GDAS or GFS tasks
'''
envars = []
if wfu.get_scheduler(wfu.detectMachine()) in ['slurm']:
envars.append(rocoto.create_envar(name='SLURM_SET', value='YES'))
envars.append(rocoto.create_envar(name='RUN_ENVIR', value='&RUN_ENVIR;'))
envars.append(rocoto.create_envar(name='HOMEgfs', value='&HOMEgfs;'))
envars.append(rocoto.create_envar(name='EXPDIR', value='&EXPDIR;'))
envars.append(rocoto.create_envar(name='CDATE', value='<cyclestr>@Y@m@d@H</cyclestr>'))
envars.append(rocoto.create_envar(name='CDUMP', value=f'{cdump}'))
envars.append(rocoto.create_envar(name='PDY', value='<cyclestr>@Y@m@d</cyclestr>'))
envars.append(rocoto.create_envar(name='cyc', value='<cyclestr>@H</cyclestr>'))
envars.append(rocoto.create_envar(name='GDATE', value='<cyclestr offset="-6:00:00">@Y@m@d@H</cyclestr>'))
envars.append(rocoto.create_envar(name='GDUMP', value='gdas'))
envars.append(rocoto.create_envar(name='gPDY', value='<cyclestr offset="-6:00:00">@Y@m@d</cyclestr>'))
envars.append(rocoto.create_envar(name='gcyc', value='<cyclestr offset="-6:00:00">@H</cyclestr>'))
base = dict_configs['base']
gfs_cyc = base.get('gfs_cyc', 0)
gldas_cyc = base.get('gldas_cyc', 0)
dohybvar = base.get('DOHYBVAR', 'NO').upper()
eupd_cyc = base.get('EUPD_CYC', 'gdas').upper()
do_bufrsnd = base.get('DO_BUFRSND', 'NO').upper()
do_gempak = base.get('DO_GEMPAK', 'NO').upper()
do_awips = base.get('DO_AWIPS', 'NO').upper()
do_wafs = base.get('WAFSF', 'NO').upper()
do_metp = base.get('DO_METP', 'NO').upper()
do_gldas = base.get('DO_GLDAS', 'NO').upper()
do_wave = base.get('DO_WAVE', 'NO').upper()
do_wave_cdump = base.get('WAVE_CDUMP', 'BOTH').upper()
dumpsuffix = base.get('DUMP_SUFFIX', '')
gridsuffix = base.get('SUFFIX', '')
dict_tasks = OrderedDict()
# prep
deps = []
dep_dict = {'type': 'metatask', 'name': f'{"gdas"}post', 'offset': '-06:00:00'}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/gdas.@Y@m@d/@H/atmos/gdas.t@Hz.atmf009{gridsuffix}'
dep_dict = {'type': 'data', 'data': data, 'offset': '-06:00:00'}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&DMPDIR;/{cdump}{dumpsuffix}.@Y@m@d/@H/atmos/{cdump}.t@Hz.updated.status.tm00.bufr_d'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
gfs_enkf = True if eupd_cyc in ['BOTH', 'GFS'] and dohybvar in ['Y', 'YES'] else False
if gfs_enkf and cdump in ['gfs']:
if gfs_cyc == 4:
task = wfu.create_wf_task('prep', cdump=cdump, envar=envars, dependency=dependencies)
else:
task = wfu.create_wf_task('prep', cdump=cdump, envar=envars, dependency=dependencies, cycledef='gdas')
else:
task = wfu.create_wf_task('prep', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}prep'] = task
# wave tasks in gdas or gfs or both
if do_wave_cdump in ['BOTH']:
cdumps = ['gfs', 'gdas']
elif do_wave_cdump in ['GFS']:
cdumps = ['gfs']
elif do_wave_cdump in ['GDAS']:
cdumps = ['gdas']
# waveinit
if do_wave in ['Y', 'YES'] and cdump in cdumps:
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}prep'}
deps.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type': 'cycleexist', 'condition': 'not', 'offset': '-06:00:00'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='or', dep=deps)
task = wfu.create_wf_task('waveinit', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}waveinit'] = task
# waveprep
if do_wave in ['Y', 'YES'] and cdump in cdumps:
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}waveinit'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('waveprep', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}waveprep'] = task
# anal
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}prep'}
deps.append(rocoto.add_dependency(dep_dict))
if dohybvar in ['y', 'Y', 'yes', 'YES']:
dep_dict = {'type': 'metatask', 'name': f'{"gdas"}epmn', 'offset': '-06:00:00'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
else:
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('anal', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}anal'] = task
# analcalc
deps1 = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.loginc.txt'
dep_dict = {'type': 'data', 'data': data}
deps1.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type': 'task', 'name': f'{cdump}anal'}
deps.append(rocoto.add_dependency(dep_dict))
if dohybvar in ['y', 'Y', 'yes', 'YES'] and cdump == 'gdas':
dep_dict = {'type': 'task', 'name': f'{"gdas"}echgres', 'offset': '-06:00:00'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
else:
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('analcalc', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}analcalc'] = task
# analdiag
if cdump in ['gdas']:
deps1 = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.loginc.txt'
dep_dict = {'type': 'data', 'data': data}
deps1.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type': 'task', 'name': f'{cdump}anal'}
deps1.append(rocoto.add_dependency(dep_dict))
dependencies1 = rocoto.create_dependency(dep_condition='or', dep=deps1)
deps2 = []
deps2 = dependencies1
dep_dict = {'type': 'cycleexist', 'offset': '-06:00:00'}
deps2.append(rocoto.add_dependency(dep_dict))
dependencies2 = rocoto.create_dependency(dep_condition='and', dep=deps2)
task = wfu.create_wf_task('analdiag', cdump=cdump, envar=envars, dependency=dependencies2)
dict_tasks[f'{cdump}analdiag'] = task
# gldas
if cdump in ['gdas'] and do_gldas in ['Y', 'YES']:
deps1 = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.loginc.txt'
dep_dict = {'type': 'data', 'data': data}
deps1.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type': 'task', 'name': f'{cdump}anal'}
deps1.append(rocoto.add_dependency(dep_dict))
dependencies1 = rocoto.create_dependency(dep_condition='or', dep=deps1)
deps2 = []
deps2 = dependencies1
dep_dict = {'type': 'cycleexist', 'offset': '-06:00:00'}
deps2.append(rocoto.add_dependency(dep_dict))
dependencies2 = rocoto.create_dependency(dep_condition='and', dep=deps2)
task = wfu.create_wf_task('gldas', cdump=cdump, envar=envars, dependency=dependencies2)
dict_tasks[f'{cdump}gldas'] = task
# fcst
deps1 = []
#data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.loginc.txt'
#dep_dict = {'type': 'data', 'data': data}
#deps1.append(rocoto.add_dependency(dep_dict))
if cdump in ['gdas']:
dep_dict = {'type': 'cycleexist', 'condition': 'not', 'offset': '-06:00:00'}
deps1.append(rocoto.add_dependency(dep_dict))
if do_gldas in ['Y', 'YES']:
dep_dict = {'type': 'task', 'name': f'{cdump}gldas'}
deps1.append(rocoto.add_dependency(dep_dict))
else:
dep_dict = {'type': 'task', 'name': f'{cdump}analcalc'}
deps1.append(rocoto.add_dependency(dep_dict))
elif cdump in ['gfs']:
dep_dict = {'type': 'task', 'name': f'{cdump}anal'}
deps1.append(rocoto.add_dependency(dep_dict))
dependencies1 = rocoto.create_dependency(dep_condition='or', dep=deps1)
if do_wave in ['Y', 'YES'] and cdump in cdumps:
deps2 = []
deps2 = dependencies1
dep_dict = {'type': 'task', 'name': f'{cdump}waveprep'}
deps2.append(rocoto.add_dependency(dep_dict))
dependencies2 = rocoto.create_dependency(dep_condition='and', dep=deps2)
task = wfu.create_wf_task('fcst', cdump=cdump, envar=envars, dependency=dependencies2)
else:
task = wfu.create_wf_task('fcst', cdump=cdump, envar=envars, dependency=dependencies1)
dict_tasks[f'{cdump}fcst'] = task
# post
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.log#dep#.txt'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type': 'task', 'name': f'{cdump}fcst'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='or', dep=deps)
fhrgrp = rocoto.create_envar(name='FHRGRP', value='#grp#')
fhrlst = rocoto.create_envar(name='FHRLST', value='#lst#')
ROTDIR = rocoto.create_envar(name='ROTDIR', value='&ROTDIR;')
postenvars = envars + [fhrgrp] + [fhrlst] + [ROTDIR]
varname1, varname2, varname3 = 'grp', 'dep', 'lst'
varval1, varval2, varval3 = get_postgroups(dict_configs['post'], cdump=cdump)
vardict = {varname2: varval2, varname3: varval3}
task = wfu.create_wf_task('post', cdump=cdump, envar=postenvars, dependency=dependencies,
metatask='post', varname=varname1, varval=varval1, vardict=vardict)
dict_tasks[f'{cdump}post'] = task
# wavepostsbs
if do_wave in ['Y', 'YES'] and cdump in cdumps:
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/wave/rundata/{cdump}wave.out_grd.gnh_10m.@Y@m@d.@H0000'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/wave/rundata/{cdump}wave.out_grd.aoc_9km.@Y@m@d.@H0000'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/wave/rundata/{cdump}wave.out_grd.gsh_15m.@Y@m@d.@H0000'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wavepostsbs', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wavepostsbs'] = task
# wavepostbndpnt
if do_wave in ['Y', 'YES'] and cdump in ['gfs']:
deps = []
dep_dict = {'type':'task', 'name':f'{cdump}fcst'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('wavepostbndpnt', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wavepostbndpnt'] = task
# wavepostbndpntbll
if do_wave in ['Y', 'YES'] and cdump in ['gfs']:
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.logf180.txt'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type':'task', 'name':f'{cdump}wavepostbndpnt'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wavepostbndpntbll', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wavepostbndpntbll'] = task
# wavepostpnt
if do_wave in ['Y', 'YES'] and cdump in ['gdas']:
deps = []
dep_dict = {'type':'task', 'name':f'{cdump}fcst'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('wavepostpnt', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wavepostpnt'] = task
if do_wave in ['Y', 'YES'] and cdump in ['gfs']:
deps = []
dep_dict = {'type':'task', 'name':f'{cdump}fcst'}
deps.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type':'task', 'name':f'{cdump}wavepostbndpntbll'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wavepostpnt', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wavepostpnt'] = task
# wavegempak
if do_wave in ['Y', 'YES'] and do_gempak in ['Y', 'YES'] and cdump in ['gfs']:
deps = []
dep_dict = {'type':'task', 'name':f'{cdump}wavepostsbs'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('wavegempak', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wavegempak'] = task
# waveawipsgridded
if do_wave in ['Y', 'YES'] and do_awips in ['Y', 'YES'] and cdump in ['gfs']:
deps = []
dep_dict = {'type':'task', 'name':f'{cdump}wavepostsbs'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('waveawipsgridded', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}waveawipsgridded'] = task
# waveawipsbulls
if do_wave in ['Y', 'YES'] and do_awips in ['Y', 'YES'] and cdump in ['gfs']:
deps = []
dep_dict = {'type':'task', 'name':f'{cdump}wavepostsbs'}
deps.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type':'task', 'name':f'{cdump}wavepostpnt'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('waveawipsbulls', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}waveawipsbulls'] = task
# wavestat
#if do_wave in ['Y', 'YES'] and cdump in cdumps:
# deps = []
# dep_dict = {'type':'task', 'name':'%swavepost' % cdump}
# deps.append(rocoto.add_dependency(dep_dict))
# dependencies = rocoto.create_dependency(dep=deps)
# task = wfu.create_wf_task('wavestat', cdump=cdump, envar=envars, dependency=dependencies)
# dict_tasks['%swavestat' % cdump] = task
# vrfy
deps = []
dep_dict = {'type': 'metatask', 'name': f'{cdump}post'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('vrfy', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}vrfy'] = task
# metp
if cdump in ['gfs'] and do_metp in ['Y', 'YES']:
deps = []
dep_dict = {'type':'metatask', 'name':f'{cdump}post'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
sdate_gfs = rocoto.create_envar(name='SDATE_GFS', value='&SDATE_GFS;')
metpcase = rocoto.create_envar(name='METPCASE', value='#metpcase#')
metpenvars = envars + [sdate_gfs] + [metpcase]
varname1 = 'metpcase'
varval1 = 'g2g1 g2o1 pcp1'
task = wfu.create_wf_task('metp', cdump=cdump, envar=metpenvars, dependency=dependencies,
metatask='metp', varname=varname1, varval=varval1)
dict_tasks[f'{cdump}metp'] = task
#postsnd
if cdump in ['gfs'] and do_bufrsnd in ['Y', 'YES']:
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}fcst'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('postsnd', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}postsnd'] = task
# awips
if cdump in ['gfs'] and do_awips in ['Y', 'YES']:
deps = []
dep_dict = {'type': 'metatask', 'name': f'{cdump}post'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
fhrgrp = rocoto.create_envar(name='FHRGRP', value='#grp#')
fhrlst = rocoto.create_envar(name='FHRLST', value='#lst#')
ROTDIR = rocoto.create_envar(name='ROTDIR', value='&ROTDIR;')
awipsenvars = envars + [fhrgrp] + [fhrlst] + [ROTDIR]
varname1, varname2, varname3 = 'grp', 'dep', 'lst'
varval1, varval2, varval3 = get_awipsgroups(dict_configs['awips'], cdump=cdump)
vardict = {varname2: varval2, varname3: varval3}
task = wfu.create_wf_task('awips', cdump=cdump, envar=awipsenvars, dependency=dependencies,
metatask='awips', varname=varname1, varval=varval1, vardict=vardict)
dict_tasks[f'{cdump}awips'] = task
# gempak
if do_gempak in ['Y', 'YES']:
deps = []
dep_dict = {'type': 'metatask', 'name': f'{cdump}post'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
ROTDIR = rocoto.create_envar(name='ROTDIR', value='&ROTDIR;')
gempakenvars = envars + [ROTDIR]
task = wfu.create_wf_task('gempak', cdump=cdump, envar=gempakenvars, dependency=dependencies)
dict_tasks[f'{cdump}gempak'] = task
# wafs
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if006'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if012'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if015'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if018'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if021'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if024'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if027'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if030'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if033'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if036'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wafs', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wafs'] = task
# wafsgcip
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if006'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if012'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if015'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if018'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if021'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if024'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if027'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if030'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if033'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if036'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wafsgcip', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wafsgcip'] = task
# wafsgrib2
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if006'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if012'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if015'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if018'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if021'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if024'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if027'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if030'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if033'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if036'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wafsgrib2', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wafsgrib2'] = task
# wafsgrib20p25
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
deps = []
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if006'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if012'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if015'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if018'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if021'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if024'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if027'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if030'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if033'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
data = f'&ROTDIR;/{cdump}.@Y@m@d/@H/atmos/{cdump}.t@Hz.wafs.grb2if036'
dep_dict = {'type': 'data', 'data': data}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('wafsgrib20p25', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wafsgrib20p25'] = task
# wafsblending
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}wafsgrib2'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('wafsblending', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wafsblending'] = task
# wafsblending0p25
if cdump in ['gfs'] and do_wafs in ['Y', 'YES']:
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}wafsgrib20p25'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep=deps)
task = wfu.create_wf_task('wafsblending0p25', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}wafsblending0p25'] = task
# arch
deps = []
dep_dict = {'type': 'task', 'name': f'{cdump}vrfy'}
deps.append(rocoto.add_dependency(dep_dict))
if do_wave in ['Y', 'YES']:
dep_dict = {'type': 'task', 'name': f'{cdump}wavepostsbs'}
deps.append(rocoto.add_dependency(dep_dict))
dep_dict = {'type': 'task', 'name': f'{cdump}wavepostpnt'}
deps.append(rocoto.add_dependency(dep_dict))
if cdump in ['gfs']:
dep_dict = {'type': 'task', 'name': f'{cdump}wavepostbndpnt'}
deps.append(rocoto.add_dependency(dep_dict))
dependencies = rocoto.create_dependency(dep_condition='and', dep=deps)
task = wfu.create_wf_task('arch', cdump=cdump, envar=envars, dependency=dependencies)
dict_tasks[f'{cdump}arch'] = task
return dict_tasks
def get_hyb_tasks(dict_configs, cycledef='enkf'):
'''
Create Hybrid tasks
'''
# Determine groups based on ensemble size and grouping
base = dict_configs['base']
nens = base['NMEM_ENKF']
lobsdiag_forenkf = base.get('lobsdiag_forenkf', '.false.').upper()
eupd_cyc = base.get('EUPD_CYC', 'gdas').upper()
eobs = dict_configs['eobs']
nens_eomg = eobs['NMEM_EOMGGRP']
neomg_grps = nens / nens_eomg
EOMGGROUPS = ' '.join([f'{x:02d}' for x in range(1, int(neomg_grps) + 1)])
efcs = dict_configs['efcs']
nens_efcs = efcs['NMEM_EFCSGRP']
nefcs_grps = nens / nens_efcs
EFCSGROUPS = ' '.join([f'{x:02d}' for x in range(1, int(nefcs_grps) + 1)])
earc = dict_configs['earc']
nens_earc = earc['NMEM_EARCGRP']
nearc_grps = nens / nens_earc
EARCGROUPS = ' '.join([f'{x:02d}' for x in range(0, int(nearc_grps) + 1)])
envars = []
if wfu.get_scheduler(wfu.detectMachine()) in ['slurm']:
envars.append(rocoto.create_envar(name='SLURM_SET', value='YES'))
envars.append(rocoto.create_envar(name='RUN_ENVIR', value='&RUN_ENVIR;'))
envars.append(rocoto.create_envar(name='HOMEgfs', value='&HOMEgfs;'))
envars.append(rocoto.create_envar(name='EXPDIR', value='&EXPDIR;'))
envars.append(rocoto.create_envar(name='CDATE', value='<cyclestr>@Y@m@d@H</cyclestr>'))
#envars.append(rocoto.create_envar(name='CDUMP', value=f'{cdump}'))
envars.append(rocoto.create_envar(name='PDY', value='<cyclestr>@Y@m@d</cyclestr>'))
envars.append(rocoto.create_envar(name='cyc', value='<cyclestr>@H</cyclestr>'))
ensgrp = rocoto.create_envar(name='ENSGRP', value='#grp#')
dict_tasks = OrderedDict()
if eupd_cyc in ['BOTH']:
cdumps = ['gfs', 'gdas']
elif eupd_cyc in ['GFS']:
cdumps = ['gfs']
elif eupd_cyc in ['GDAS']:
cdumps = ['gdas']
for cdump in cdumps:
envar_cdump = rocoto.create_envar(name='CDUMP', value=f'{cdump}')
envars1 = envars + [envar_cdump]
# eobs