diff --git a/Smartscope/core/interfaces/jeolserialem_interface.py b/Smartscope/core/interfaces/jeolserialem_interface.py index 18c2bd07..39f10e83 100644 --- a/Smartscope/core/interfaces/jeolserialem_interface.py +++ b/Smartscope/core/interfaces/jeolserialem_interface.py @@ -45,6 +45,9 @@ def go_to_highmag(self): def set_atlas_optics(self): return self.set_atlas_optics_imaging_state() + + def atlas(self, size, file=''): + return self.atlas_in_low_dose_search(size, file) def setup(self, *args, **kwargs): super().setup(*args, **kwargs) @@ -68,7 +71,7 @@ def loadGrid(self, position): sem.Delay(5) sem.SetColumnOrGunValve(0) sem.Delay(5) - command = f'{self.additional_settings.transfer_cartridge_path} \"{position} 3 0\"' + command = f'{self.additional_settings.transfer_cartridge_path} {position} 3 0' self.logger.info(f'Loading grid with command: \"{command}\"') sem.RunInShell(command) sem.Delay(5)