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basenet.ode.set
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## Set file for rubinetal_resp_cpg_NaP_added.ode on Thu Jun 2 17:19:22 2016
20 Number of equations and auxiliaries
62 Number of parameters
# Numerical stuff
1 nout
40 nullcline mesh
8 Qual RK
10000 total
0.1 DeltaT
0 T0
0 Transient
5000 Bound
1e-12 DtMin
1 DtMax
0.001 Tolerance
0.001 Abs. Tolerance
0 Max Delay
100 Eigenvector iterates
0.001 Eigenvector tolerance
0.001 Newton tolerance
0 Poincare plane
1e-05 Boundary value tolerance
1e-05 Boundary value epsilon
20 Boundary value iterates
0 Poincare None
1 Poincare variable
1 Poincare sign
0 Stop on Section
0 Delay flag
10000 Current time
10000 Last Time
1 MyStart
1 INFLAG
# Delays
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
0.0
# Bndry conds
0
0
0
0
0
0
0
0
0
0
0
# Old ICs
-60.66742063215683 V1
-55.15919855536387 V2
-28.8868572708057 V3
-55.19831170723084 V4
0.2596807420292297 H1
0.2033427754553293 H2
0.4960826935839792 H3
0.4337940074659155 H4
0.266625030478492 M2
0.1272788027867369 M3
0.0350532299984076 M4
# Ending ICs
-52.84739155518387 V1
-43.29209271556049 V2
-38.10366918617883 V3
-38.2925121574395 V4
0.462077254168296 H1
0.2816964053476461 H2
0.3568875503728695 H3
0.3752555725365055 H4
0.1288247945407498 M2
0.2022679212250763 M3
0.05229744268835267 M4
# Parameters
20 C
3 gLE
3.25 gLI
-65 ELE
-60 ELI
10 gsynE
0 EsynE
60 gsynI
-75 EsynI
-85 EK
50 ENa
-29 V12n
-4 kn
1 gKdr
-37 V12mp
-6 kmp
-48 V12hp
8 khp
4000 tauhp
4.5 gNaPe
0.25 gNaPi
10 gAD
2000 Tad2
1500 Tad3
2000 Tad4
0.8 Kad2
1.4 Kad3
0.8 Kad4
-32 V12outpute
-8 Koutpute
-30 V12outputi
-4 Koutputi
0.6 a12
0.6 b23
0.3 b24
0.125 b31
0.27 b32
0.45 b34
0.015 b41
0.3 b42
0.05 b43
1 Drive1
1 Drive2
1 Drive3
-0.012 c11
0.19 c12
0.58 c13
0.2 c14
0.07000000000000001 c21
0.3 c22
0.4 c24
0.025 c31
1 nf
0 sdum1
0 sdum2
0 sdum3
0 sdum4
0 edum
0 Iapp1
0 Iapp2
0 Iapp3
0 Iapp4
# Graphics
0.7071097251469876 rm
-0.4999999999826661 rm
0.4999958366025516 rm
0.7071038372138505 rm
0.5000041633974482 rm
-0.4999999999826661 rm
0 rm
0.7071038372138505 rm
0.7071097251469876 rm
0
17
1
1
0
0
18
1
1
1
0
19
1
1
8
0
20
1
1
10
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
0
1
1
1
0
-1000
1000
0
0 3DFlag
1 Timeflag
0 Colorflag
0 Type
1 color scale
0 minscale
10000 xmax
0 xmin
0.9216884970664978 ymax
0.0001775066048139706 ymin
12 zmax
-12 zmin
5000
0.0002
0.4609330018356559
2.170348504468715
0
0.08333333333333333
45 Theta
45 Phi
0 xshft
0 yshft
0 zshft
0 xlo
0.0001775066048139706 ylo
0
-80
10000 xhi
0.9216884970664978 yhi
1000
20
# Transpose variables etc
V1
2 n columns
1 n rows
1 row skip
1 col skip
1 row 0
# Coupling stuff for H funs
0
0
0
0
0
0
0
0
0
0
0
# Array plot stuff
1 NCols
0 Row 1
50 NRows
8 RowSkip
0 Zmin
1 Zmax
# Torus information
0 Torus flag 1=ON
6.283185307179586 Torus period
# Range information
C
-1 eq-range stab col
0 shoot flag 1=on
10 eq-range steps
0 eq_range low
1 eq_range high
V1
V1
20 Range steps
0 Cycle color 1=on
1 Reset data 1=on
1 Use old I.C.s 1=yes
0 Par1 low
0 Par2 low
1 Par1 high
1 Par2 high
C
0 BVP side
0 color cycle flag 1=on
10 BVP range steps
0 BVP range low
1 BVP range high
RHS etc ...
dV1/dT=(-INAPE(V1,H1)-IKDR(V1)-ILE(V1)-GSYNI*(B31*FOUTI(V3)+B41*FOUTI(V4)+SDUM1)*(V1-ESYNI)-GSYNE*(C11*DRIVE1+C21*DRIVE2+C31*DRIVE3)*(V1-ESYNE))/C
dV2/dT=(-INAPI(V2,H2)-IAD(V2,M2)-ILI(V2)-GSYNI*(B32*FOUTI(V3)+B42*FOUTI(V4)+SDUM2)*(V2-ESYNI)-GSYNE*(A12*FOUTE(V1)+C22*DRIVE2+C12*DRIVE1+EDUM)*(V2-ESYNE))/C
dV3/dT=(-INAPI(V3,H3)-IAD(V3,M3)-ILI(V3)-GSYNI*(B23*FOUTI(V2)+B43*FOUTI(V4)+SDUM3)*(V3-ESYNI)-GSYNE*(C13*DRIVE1)*(V3-ESYNE))/C
dV4/dT=(-INAPI(V4,H4)-IAD(V4,M4)-ILI(V4)-GSYNI*(B24*FOUTI(V2)+B34*FOUTI(V3)+SDUM4)*(V4-ESYNI)-GSYNE*(C14*DRIVE1+C24*DRIVE2)*(V4-ESYNE))/C
dH1/dT=(HPINF(V1)-H1)/TAUINF(V1)
dH2/dT=(HPINF(V2)-H2)/TAUINF(V2)
dH3/dT=(HPINF(V3)-H3)/TAUINF(V3)
dH4/dT=(HPINF(V4)-H4)/TAUINF(V4)
dM2/dT=(-M2+KAD2*FOUTI(V2))/TAD2
dM3/dT=(-M3+KAD3*FOUTI(V3))/TAD3
dM4/dT=(-M4+KAD4*FOUTI(V4))/TAD4
INH1=B31*FOUTI(V3)+B41*FOUTI(V4)
INH2=B32*FOUTI(V3)+B42*FOUTI(V4)
INH3=B23*FOUTI(V2)+B43*FOUTI(V4)
INH4=B24*FOUTI(V2)+B34*FOUTI(V3)
EXC2=A12*FOUTE(V1)
FV1=FOUTE(V1)
FV2=FOUTI(V2)
FV3=FOUTI(V3)
FV4=FOUTI(V4)
User-defined functions:
FOUTE(V) = 1./(1+EXP((V-V12OUTPUTE)/KOUTPUTE))
FOUTI(V) = 1./(1+EXP((V-V12OUTPUTI)/KOUTPUTI))
NINF(V) = 1./(1+EXP((V-V12N)/KN))
MPINF(V) = 1./(1+EXP((V-V12MP)/KMP))
HPINF(V) = 1./(1+EXP((V-V12HP)/KHP))
TAUINF(V) = TAUHP/COSH((V-V12HP)/(2*KHP))
INAPE(V,H) = GNAPE*MPINF(V)*H*(V-ENA)
INAPI(V,H) = GNAPI*MPINF(V)*H*(V-ENA)
IKDR(V) = GKDR*NINF(V)^4*(V-EK)
IAD(V,M) = GAD*M*(V-EK)
ILE(V) = GLE*(V-ELE)
ILI(V) = GLI*(V-ELI)