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alignment_requirements.txt
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alignment_requirements.txt
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name: FilterAlign
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _r-mutex=1.0.1=anacondar_1
- brotli=1.1.0=h0dc2134_1
- brotli-bin=1.1.0=h0dc2134_1
- brotli-python=1.1.0=py311hdf8f085_1
- bwa-mem2=2.2.1=hdf58011_5
- bwidget=1.9.14=h694c41f_1
- bzip2=1.0.8=h10d778d_5
- c-ares=1.28.1=h10d778d_0
- ca-certificates=2024.2.2=h8857fd0_0
- cairo=1.18.0=h99e66fa_0
- cctools_osx-64=986=h58a35ae_0
- certifi=2024.2.2=pyhd8ed1ab_0
- charset-normalizer=3.3.2=pyhd8ed1ab_0
- clang=18.1.3=default_h7151d67_0
- clang-18=18.1.3=default_h7151d67_0
- clang_impl_osx-64=18.1.3=hdbcc6ac_11
- clang_osx-64=18.1.3=hb91bd55_11
- clangxx=18.1.3=default_h7151d67_0
- clangxx_impl_osx-64=18.1.3=h5bc21ce_11
- clangxx_osx-64=18.1.3=hb91bd55_11
- click=8.1.7=unix_pyh707e725_0
- coloredlogs=15.0.1=pyhd8ed1ab_3
- colormath=3.0.0=py_2
- compiler-rt=18.1.3=ha38d28d_0
- compiler-rt_osx-64=18.1.3=ha38d28d_0
- contourpy=1.2.1=py311h1d816ee_0
- curl=8.7.1=h726d00d_0
- cycler=0.12.1=pyhd8ed1ab_0
- expat=2.6.2=h73e2aa4_0
- fastqc=0.12.1=hdfd78af_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=h77eed37_1
- fontconfig=2.14.2=h5bb23bf_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.51.0=py311he705e18_0
- freetype=2.12.1=h60636b9_2
- fribidi=1.0.10=hbcb3906_0
- future=1.0.0=pyhd8ed1ab_0
- gettext=0.22.5=h5ff76d1_2
- gettext-tools=0.22.5=h5ff76d1_2
- gfortran_impl_osx-64=12.3.0=hc328e78_3
- gfortran_osx-64=12.3.0=h18f7dce_1
- gmp=6.3.0=h73e2aa4_1
- graphite2=1.3.13=h73e2aa4_1003
- harfbuzz=8.3.0=hf45c392_0
- htslib=1.19.1=h365c357_2
- humanfriendly=10.0=pyhd8ed1ab_6
- humanize=4.9.0=pyhd8ed1ab_0
- icu=73.2=hf5e326d_0
- idna=3.6=pyhd8ed1ab_0
- importlib-metadata=7.1.0=pyha770c72_0
- isl=0.26=imath32_h2e86a7b_101
- jinja2=3.1.3=pyhd8ed1ab_0
- kiwisolver=1.4.5=py311h5fe6e05_1
- krb5=1.21.2=hb884880_0
- lcms2=2.15=ha53face_2
- ld64_osx-64=711=had5d0d3_0
- lerc=4.0.0=hb486fe8_0
- libasprintf=0.22.5=h5ff76d1_2
- libasprintf-devel=0.22.5=h5ff76d1_2
- libblas=3.9.0=22_osx64_openblas
- libbrotlicommon=1.1.0=h0dc2134_1
- libbrotlidec=1.1.0=h0dc2134_1
- libbrotlienc=1.1.0=h0dc2134_1
- libcblas=3.9.0=22_osx64_openblas
- libclang-cpp18.1=18.1.3=default_h7151d67_0
- libcurl=8.7.1=h726d00d_0
- libcxx=16.0.6=hd57cbcb_0
- libdeflate=1.18=hac1461d_0
- libedit=3.1.20191231=h0678c8f_2
- libev=4.33=h10d778d_2
- libexpat=2.6.2=h73e2aa4_0
- libffi=3.4.2=h0d85af4_5
- libgettextpo=0.22.5=h5ff76d1_2
- libgettextpo-devel=0.22.5=h5ff76d1_2
- libgfortran=5.0.0=13_2_0_h97931a8_3
- libgfortran-devel_osx-64=12.3.0=h0b6f5ec_3
- libgfortran5=13.2.0=h2873a65_3
- libglib=2.78.1=h6d9ecee_0
- libiconv=1.17=hd75f5a5_2
- libintl=0.22.5=h5ff76d1_2
- libintl-devel=0.22.5=h5ff76d1_2
- libjpeg-turbo=2.1.5.1=h0dc2134_1
- liblapack=3.9.0=22_osx64_openblas
- libllvm18=18.1.3=hbcf5fad_0
- libnghttp2=1.58.0=h64cf6d3_1
- libopenblas=0.3.27=openmp_hfef2a42_0
- libpng=1.6.43=h92b6c6a_0
- libsqlite=3.45.2=h92b6c6a_0
- libssh2=1.11.0=hd019ec5_0
- libtiff=4.6.0=hf955e92_0
- libwebp-base=1.3.2=h10d778d_1
- libxcb=1.15=hb7f2c08_0
- libxml2=2.12.6=hc0ae0f7_1
- libzlib=1.2.13=h8a1eda9_5
- llvm-openmp=18.1.3=hb6ac08f_0
- llvm-tools=18.1.3=hbcf5fad_0
- lzstring=1.0.4=py_1001
- make=4.3=h22f3db7_1
- markdown=3.6=pyhd8ed1ab_0
- markdown-it-py=3.0.0=pyhd8ed1ab_0
- markupsafe=2.1.5=py311he705e18_0
- matplotlib-base=3.8.4=py311h6ff1f5f_0
- mdurl=0.1.2=pyhd8ed1ab_0
- mpc=1.3.1=h81bd1dd_0
- mpfr=4.2.1=h4f6b447_1
- multiqc=1.19=pyhdfd78af_0
- munkres=1.1.4=pyh9f0ad1d_0
- ncurses=6.4.20240210=h73e2aa4_0
- networkx=3.3=pyhd8ed1ab_1
- numpy=1.26.4=py311hc43a94b_0
- openjdk=21.0.2=h2d185b6_0
- openjpeg=2.5.2=h7310d3a_0
- openssl=3.2.1=hd75f5a5_1
- packaging=24.0=pyhd8ed1ab_0
- pango=1.50.14=h19c1c8a_2
- pcre2=10.40=h1c4e4bc_0
- perl=5.32.1=7_h10d778d_perl5
- picard=3.1.1=hdfd78af_0
- pillow=10.0.1=py311hd5308a1_1
- pip=24.0=pyhd8ed1ab_0
- pixman=0.43.4=h73e2aa4_0
- pthread-stubs=0.4=hc929b4f_1001
- pyaml-env=1.1.0=pyhd8ed1ab_0
- pygments=2.17.2=pyhd8ed1ab_0
- pyparsing=3.1.2=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.11.8=h9f0c242_0_cpython
- python-dateutil=2.9.0=pyhd8ed1ab_0
- python_abi=3.11=4_cp311
- pyyaml=5.4.1=py311h5547dcb_4
- r-base=4.3.1=h61172b1_5
- readline=8.2=h9e318b2_1
- requests=2.31.0=pyhd8ed1ab_0
- rich=13.7.1=pyhd8ed1ab_0
- rich-click=1.7.4=pyhd8ed1ab_0
- samtools=1.19.2=hd510865_1
- setuptools=69.2.0=pyhd8ed1ab_0
- sigtool=0.1.3=h88f4db0_0
- simplejson=3.19.2=py311he705e18_0
- six=1.16.0=pyh6c4a22f_0
- spectra=0.0.11=py_1
- tapi=1100.0.11=h9ce4665_0
- tk=8.6.13=h1abcd95_1
- tktable=2.10=ha166976_5
- trimmomatic=0.39=hdfd78af_2
- typing_extensions=4.11.0=pyha770c72_0
- tzdata=2024a=h0c530f3_0
- urllib3=2.2.1=pyhd8ed1ab_0
- wheel=0.43.0=pyhd8ed1ab_1
- xorg-libxau=1.0.11=h0dc2134_0
- xorg-libxdmcp=1.1.3=h35c211d_0
- xz=5.2.6=h775f41a_0
- yaml=0.2.5=h0d85af4_2
- zipp=3.17.0=pyhd8ed1ab_0
- zlib=1.2.13=h8a1eda9_5
- zstd=1.5.5=h829000d_0
prefix: /opt/anaconda3/envs/FilterAlign