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test_plots.py
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# © Crown copyright, Met Office (2022-2024) and CSET contributors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Test plotting operators."""
from pathlib import Path
import iris.cube
import pytest
from CSET.operators import collapse, plot, read
def test_check_single_cube():
"""Conversion to a single cube, and rejection where not possible."""
cube = iris.cube.Cube([0.0])
cubelist = iris.cube.CubeList([cube])
long_cubelist = iris.cube.CubeList([cube, cube])
non_cube = 1
assert plot._check_single_cube(cube) == cube
assert plot._check_single_cube(cubelist) == cube
with pytest.raises(TypeError):
plot._check_single_cube(long_cubelist)
with pytest.raises(TypeError):
plot._check_single_cube(non_cube)
def test_spatial_contour_plot(cube, tmp_working_dir):
"""Plot spatial contour plot of instant air temp."""
# Remove realization coord to increase coverage, and as its not needed.
cube.remove_coord("realization")
cube_2d = cube.slices_over("time").next()
plot.spatial_contour_plot(cube_2d, filename="plot")
assert Path("plot_462147.0.png").is_file()
def test_contour_plot_sequence(cube, tmp_working_dir):
"""Plot sequence of contour plots."""
plot.spatial_contour_plot(cube, sequence_coordinate="time")
assert Path("untitled_462147.0.png").is_file()
assert Path("untitled_462148.0.png").is_file()
assert Path("untitled_462149.0.png").is_file()
def test_postage_stamp_contour_plot(monkeypatch, tmp_path):
"""Plot postage stamp plots of ensemble data."""
ensemble_cube = read.read_cube("tests/test_data/exeter_em*.nc")
# Get a single time step.
ensemble_cube_3d = next(ensemble_cube.slices_over("time"))
monkeypatch.chdir(tmp_path)
plot.spatial_contour_plot(ensemble_cube_3d)
assert Path("untitled_463858.0.png").is_file()
def test_postage_stamp_contour_plot_sequence_coord_check(cube, tmp_working_dir):
"""Check error when cube has no time coordinate."""
# What does this even physically mean? No data?
cube.remove_coord("time")
with pytest.raises(ValueError):
plot.spatial_contour_plot(cube)
def test_spatial_pcolormesh_plot(cube, tmp_working_dir):
"""Plot spatial pcolormesh plot of instant air temp."""
# Remove realization coord to increase coverage, and as its not needed.
cube.remove_coord("realization")
cube_2d = cube.slices_over("time").next()
plot.spatial_pcolormesh_plot(cube_2d, filename="plot")
assert Path("plot_462147.0.png").is_file()
def test_pcolormesh_plot_sequence(cube, tmp_working_dir):
"""Plot sequence of pcolormesh plots."""
plot.spatial_pcolormesh_plot(cube, sequence_coordinate="time")
assert Path("untitled_462147.0.png").is_file()
assert Path("untitled_462148.0.png").is_file()
assert Path("untitled_462149.0.png").is_file()
def test_postage_stamp_pcolormesh_plot(monkeypatch, tmp_path):
"""Plot postage stamp plots of ensemble data."""
ensemble_cube = read.read_cube("tests/test_data/exeter_em*.nc")
# Get a single time step.
ensemble_cube_3d = next(ensemble_cube.slices_over("time"))
monkeypatch.chdir(tmp_path)
plot.spatial_pcolormesh_plot(ensemble_cube_3d)
assert Path("untitled_463858.0.png").is_file()
def test_postage_stamp_pcolormesh_plot_sequence_coord_check(cube, tmp_working_dir):
"""Check error when cube has no time coordinate."""
# What does this even physically mean? No data?
cube.remove_coord("time")
with pytest.raises(ValueError):
plot.spatial_pcolormesh_plot(cube)
def test_plot_line_series(cube, tmp_working_dir):
"""Save a line series plot."""
cube = collapse.collapse(cube, ["grid_latitude", "grid_longitude"], "MEAN")
plot.plot_line_series(cube)
assert Path("untitled.png").is_file()
def test_plot_line_series_with_filename(cube, tmp_working_dir):
"""Save a line series plot with specific filename and series coordinate."""
cube = collapse.collapse(cube, ["time", "grid_longitude"], "MEAN")
plot.plot_line_series(
cube, filename="latitude_average.ext", series_coordinate="grid_latitude"
)
assert Path("latitude_average.png").is_file()
def test_plot_line_series_no_series_coordinate(tmp_working_dir):
"""Error when cube is missing series coordinate (time)."""
cube = iris.cube.Cube([], var_name="nothing")
with pytest.raises(ValueError):
plot.plot_line_series(cube)
def test_plot_line_series_too_many_dimensions(cube, tmp_working_dir):
"""Error when cube has more than one dimension."""
with pytest.raises(ValueError):
plot.plot_line_series(cube)
def test_plot_vertical_line_series(vertical_profile_cube, tmp_working_dir):
"""Save a vertical line series plot."""
plot.plot_vertical_line_series(
vertical_profile_cube, series_coordinate="pressure", sequence_coordinate="time"
)
assert Path("untitled_473718.0.png").is_file()
assert Path("untitled_473721.0.png").is_file()
def test_plot_vertical_line_series_with_filename(
vertical_profile_cube, tmp_working_dir
):
"""Save a vertical line series plot with specific filename.
The given filename does not haven extension to test that too.
"""
plot.plot_vertical_line_series(
vertical_profile_cube,
filename="Test",
series_coordinate="pressure",
sequence_coordinate="time",
)
assert Path("Test_473718.0.png").is_file()
assert Path("Test_473721.0.png").is_file()
def test_plot_vertical_line_series_no_series_coordinate(
vertical_profile_cube, tmp_working_dir
):
"""Error when cube is missing series coordinate (pressure)."""
vertical_profile_cube.remove_coord("pressure")
with pytest.raises(ValueError, match="Cube must have a pressure coordinate."):
plot.plot_vertical_line_series(
vertical_profile_cube, series_coordinate="pressure"
)
def test_plot_vertical_line_series_no_sequence_coordinate(
vertical_profile_cube, tmp_working_dir
):
"""Error when cube is missing sequence coordinate (time)."""
vertical_profile_cube.remove_coord("time")
with pytest.raises(ValueError, match="Cube must have a time coordinate."):
plot.plot_vertical_line_series(
vertical_profile_cube, series_coordinate="pressure"
)
def test_plot_vertical_line_series_too_many_dimensions(cube, tmp_working_dir):
"""Error when cube has more than one dimension."""
with pytest.raises(
ValueError, match="Cube must have a model_level_number coordinate."
):
plot.plot_vertical_line_series(cube)
def test_plot_histogram_no_sequence_coordinate(histogram_cube, tmp_working_dir):
"""Error when cube is missing sequence coordinate (time)."""
histogram_cube.remove_coord("time")
with pytest.raises(ValueError, match="Cube must have a time coordinate."):
plot.plot_histogram_series(histogram_cube, series_coordinate="pressure")
def test_plot_histogram_with_filename(histogram_cube, tmp_working_dir):
"""Plot sequence of contour plots."""
plot.plot_histogram_series(
histogram_cube, filename="test", sequence_coordinate="time"
)
assert Path("test_473718.0.png").is_file()
assert Path("test_473721.0.png").is_file()
def test_plot_and_save_postage_stamp_histogram_series(histogram_cube, tmp_working_dir):
"""Test plotting a postage stamp histogram."""
plot._plot_and_save_postage_stamp_histogram_series(
cube=histogram_cube,
filename="test.png",
title="Test",
stamp_coordinate="realization",
vmin=250,
vmax=350,
histtype="step",
)
assert Path("test.png").is_file()
def test_plot_and_save_postage_stamps_in_single_plot_histogram_series(
histogram_cube, tmp_working_dir
):
"""Test plotting a multiline histogram for multiple ensemble members."""
plot._plot_and_save_postage_stamps_in_single_plot_histogram_series(
cube=histogram_cube,
filename="test.png",
title="Test",
stamp_coordinate="realization",
vmin=250,
vmax=350,
histtype="step",
)
assert Path("test.png").is_file()
def test_scatter_plot(cube, vertical_profile_cube, tmp_working_dir):
"""Save a scatter plot."""
cube_y = collapse.collapse(cube, ["time", "grid_longitude"], "MEAN")[0:4]
cube_x = collapse.collapse(vertical_profile_cube, ["time"], "MEAN")[0:4]
plot.scatter_plot(
cube_y,
cube_x,
)
assert Path("untitled.png").is_file()
def test_scatter_plot_with_filename(cube, vertical_profile_cube, tmp_working_dir):
"""Save a scatter plot with a file name."""
cube_y = collapse.collapse(cube, ["time", "grid_longitude"], "MEAN")[0:4]
cube_x = collapse.collapse(vertical_profile_cube, ["time"], "MEAN")[0:4]
plot.scatter_plot(
cube_y,
cube_x,
filename="scatter_plot.ext",
)
assert Path("scatter_plot.png").is_file()
def test_scatter_plot_no_one_to_one_line(cube, vertical_profile_cube, tmp_working_dir):
"""Save a scatter plot without a one-to-one line."""
cube_y = collapse.collapse(cube, ["time", "grid_longitude"], "MEAN")[0:4]
cube_x = collapse.collapse(vertical_profile_cube, ["time"], "MEAN")[0:4]
plot.scatter_plot(
cube_y,
cube_x,
one_to_one=False,
)
assert Path("untitled.png").is_file()
def test_scatter_plot_too_many_x_dimensions(
cube, vertical_profile_cube, tmp_working_dir
):
"""Error when cube_x has more than one dimension."""
cube_y = collapse.collapse(cube, ["time", "grid_longitude"], "MEAN")[0:4]
cube_x = vertical_profile_cube.copy()
with pytest.raises(ValueError):
plot.scatter_plot(cube_x, cube_y)
def test_scatter_plot_too_many_y_dimensions(
cube, vertical_profile_cube, tmp_working_dir
):
"""Error when cube_y has more than one dimension."""
cube_y = cube.copy()
cube_x = collapse.collapse(vertical_profile_cube, ["time"], "MEAN")[0:4]
with pytest.raises(ValueError):
plot.scatter_plot(cube_x, cube_y)
def test_get_plot_resolution(tmp_working_dir):
"""Test getting the plot resolution."""
with open("meta.json", "wt", encoding="UTF-8") as fp:
fp.write('{"plot_resolution": 72}')
resolution = plot._get_plot_resolution()
assert resolution == 72
def test_get_plot_resolution_unset(tmp_working_dir):
"""Test getting the default plot resolution when unset."""
resolution = plot._get_plot_resolution()
assert resolution == 100
def test_invalid_plotting_method_spatial_plot(cube, tmp_working_dir):
"""Test plotting a spatial plot with an invalid method."""
with pytest.raises(ValueError, match="Unknown plotting method"):
plot._plot_and_save_spatial_plot(cube, "filename", "title", "invalid")
def test_invalid_plotting_method_postage_stamp_spatial_plot(cube, tmp_working_dir):
"""Test plotting a postage stamp spatial plot with an invalid method."""
with pytest.raises(ValueError, match="Unknown plotting method"):
plot._plot_and_save_postage_stamp_spatial_plot(
cube, "filename", "realization", "title", "invalid"
)