Inquiry About Per-Atom or Residue-Wise RMSD Calculation in MDAnalysis

[royyraa]

Hi,

I am unsure if a per-atom RMSD calculation tool is available in MDAnalysis. I did find that a 2D RMSD calculation for trajectories is available. However, I want to calculate RMSD values either residue-wise or atom-wise between two PDB files or two frames.

Do you have any suggestions or guidance on how to approach this? Any help would be greatly appreciated.