From c868ed214afea9069e8a7cb505bc2050204913c3 Mon Sep 17 00:00:00 2001 From: John Detlefs Date: Wed, 6 Jul 2016 11:35:06 -0700 Subject: [PATCH] Removed call to protected process_selection now that it isn't protected Updated CHANGELOG --- package/CHANGELOG | 1 + package/MDAnalysis/analysis/rms.py | 4 ++-- 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/package/CHANGELOG b/package/CHANGELOG index a01407ba373..08850e068fa 100644 --- a/package/CHANGELOG +++ b/package/CHANGELOG @@ -25,6 +25,7 @@ Fixes next (Issue #869) * Display of Deprecation warnings doesn't affect other modules anymore (Issue #754) * Changed nframes to n_frames in analysis modules for consistency (Issue #890) + * Removed call to protected process_selection function in RMSD Changes * Added protected variable _frame_index to to keep track of frame iteration diff --git a/package/MDAnalysis/analysis/rms.py b/package/MDAnalysis/analysis/rms.py index 7b44115b259..1d2bb7e392c 100644 --- a/package/MDAnalysis/analysis/rms.py +++ b/package/MDAnalysis/analysis/rms.py @@ -338,9 +338,9 @@ def __init__(self, traj, reference=None, select='all', self.reference = self.universe else: self.reference = reference - self.select = _process_selection(select) + self.select = process_selection(select) if groupselections is not None: - self.groupselections = [_process_selection(s) for s in groupselections] + self.groupselections = [process_selection(s) for s in groupselections] else: self.groupselections = [] self.mass_weighted = mass_weighted