q2-autopepsirf

Qiime2 plugin used for the automation of q2-pepsirf and q2-ps-plot.

https://ladnerlab.github.io/pepsirf-q2-plugin-docs/

Installation

Qiime2 Installation:

Visit: https://docs.qiime2.org/2022.2/install/ for intallation documentation on Qiime2

Pepsirf Installation:

Visit: https://github.com/LadnerLab/PepSIRF for installation documentation on PepSIRF

q2-pepsirf1 Installation:

Visit: https://github.com/LadnerLab/q2-pepsirf1 for installation documentation on q2-pepsirf1

q2-ps-plot Installation:

Visit: https://github.com/LadnerLab/q2-ps-plot for installation documentation on q2-ps-plot

q2-pepsirf installation:

Directions:

Visit: https://ladnerlab.github.io/pepsirf-q2-plugin-docs/Pepsirf_Plugins/q2-autopepsirf/ for installation documentation on q2-autopepsirf.

Updating:

Visit: https://ladnerlab.github.io/pepsirf-q2-plugin-docs/Pepsirf_Plugins/q2-autopepsirf/#updating for updating documentation on q2-autopepsirf

Tutorial

Visit: https://ladnerlab.github.io/pepsirf-q2-plugin-docs/tutorials/pepsirf-tutorial/ for a tutorial on select modules.