From 99cb3c5baa7e0396f1d0d1d9d46abd08fbd67858 Mon Sep 17 00:00:00 2001 From: LTLA Date: Fri, 6 Sep 2024 22:07:42 -0700 Subject: [PATCH] Update tiledb_array() call for argument deprecation. --- DESCRIPTION | 4 ++-- R/TileDBArray.R | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 8181198..1f23794 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: TileDBArray -Version: 1.15.1 -Date: 2024-07-13 +Version: 1.15.2 +Date: 2024-09-06 Title: Using TileDB as a DelayedArray Backend Description: Implements a DelayedArray backend for reading and writing dense or sparse arrays in the TileDB format. The diff --git a/R/TileDBArray.R b/R/TileDBArray.R index 4b0b871..d342389 100644 --- a/R/TileDBArray.R +++ b/R/TileDBArray.R @@ -196,7 +196,7 @@ setMethod("extract_array", "TileDBArraySeed", function(x, index) { return(output) } - obj <- tiledb_array(path(x), attrs=x@attr, query_type="READ", as.data.frame=TRUE) + obj <- tiledb_array(path(x), attrs=x@attr, query_type="READ", return_as="data.frame") on.exit(tiledb_array_close(obj)) df <- .extract_values(obj, index)