README.lensing

To generate the FITS files of the lensed hosts, you will need to run the followi
ng commands only once:

Run this command inside the SLSprinkler directory (or move the resulting folder to that location):

git clone https://github.com/mpwiesner/truth_tables.git 

(This will download the truth tables.  If you already have truth tables, then skip this.)

If you run in the SLSprinkler directory, then do this:

python lensed_hosts/generate_lensed_hosts_agn.py  
python lensed_hosts/generate_lensed_hosts_sne.py  

The FITS stamps will appear in a directory called 'outputs'

If you run the programs from a different directory, then do this:

python <PATH TO THIS DIRECTORY>/SLSprinkler/lensed_hosts/generate_lensed_hosts_agn.py --outdir=outputs --datadir=<PATH TO THIS DIRECTORY>/SLSprinkler/truth_tables
python <PATH TO THIS DIRECTORY>/SLSprinkler/lensed_hosts/generate_lensed_hosts_sne.py --outdir=outputs --datadir=<PATH TO THIS DIRECTORY>/SLSprinkler/truth_tables

--outdir and --datadir specify locations of output FITS files and location of input truth tables. 
They default to 'outputs' and 'truth_tables'

The default location of the output is SLSprinkler/lensed_hosts/outputs. There are 4 subdirectories, called (by default):
"SLSprinkler/lensed_hosts/outputs/agn_lensed_bulges"
"SLSprinkler/lensed_hosts/outputs/agn_lensed_disks"
"SLSprinkler/lensed_hosts/outputs/sne_lensed_bulges"
"SLSprinkler/lensed_hosts/outputs/sne_lensed_disks"

The FITS stamps that are generated are named as "<lens_cat_sys_id>_
<uband_Lensed magnitude>_
<gband_Lensed magnitude>_
<rband_Lensed magnitude>_
<iband_Lensed magnitude>_
<zband_Lensed magnitude>_
<yband_Lensed magnitude>_
bulge/disk>.fits"