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HDF5 error #127
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Okay, I can't reproduce this error on a server I'm using. Any idea, how this error could be caused? |
Okay that's weird, I did a
but then without doing anything, it now works again. How can the hdf5 installation from macports interfere with NetCDF.jl? |
I can't reproduce on Windows either.
This library still uses the old-style BinDeps solution, see build.jl, which will happily pick up libraries from your system if they satisfy the criteria. So I think that is what's going on. You should be able check the contents of deps.jl, to see what it picked up. Or you can do With BinaryBuilder.jl the general trend is to isolate the binaries used by Julia packages, to make it less dependent on what happens to be installed on the system, and provide a better cross platform experience. #123 makes that switch, so if you have issues with the build you could try out that branch. Unfortunately there are still some issues with those binaries, since HDF5 cannot be cross compiled so easily, leading to some mismatches. |
Thanks Martijn for the answer. Simply doing a re-build as you describe doesn't work for me, however adding Good to hear that NetCDF is moving towards a separately compiled binaries, that really seems to be the way to go, as shown by this issue. |
Ok, glad that you found a way to make it work, and noting it here, such that others may be able to find it as well. Since I don't think there is anything we can do here to make this better, I'll go ahead and close the issue. |
With v0.10.3 on Julia 1.5.2 I'm currently producing this error
The file exists, and also the variable nc in the same repl looks fine
However, if I try to
NetCDF.open
the file again I getAnd similarly with ncdump, which returns
Can anyone reproduce this error?
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